nixo
/
guix-devel
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity
40,206 Commits 1 Branch 0 Tags 104 MiB
Commit Graph

481 Commits

Author SHA1 Message Date
Leo Famulari dae7661a0d
gnu: Add apache-arrow. 
* gnu/packages/databases.scm (apache-arrow): New variable.
 2018-03-15 10:57:52 -04:00
Marius Bakke 9a92b9e61a
gnu: gdbm: Update to 1.14.1. 
* gnu/packages/databases.scm (gdbm): Update to 1.14.1.
 2018-03-14 22:11:34 +01:00
Ricardo Wurmus 8c72ed923d
Merge branch 'master' into core-updates 2018-03-14 17:37:20 +01:00
Ludovic Courtès 189be331ac
build-system/gnu: Add 'bootstrap' phase. 
This factorizes what has become a widespread idiom.

* guix/build/gnu-build-system.scm (%bootstrap-scripts): New variable.
(bootstrap): New procedure.
(%standard-phases): Add it after 'unpack'.
* guix/build/ant-build-system.scm (%standard-phases): Delete 'bootstrap.
* guix/build/asdf-build-system.scm (%standard-phases/source)
(%standard-phases): Likewise.
* guix/build/cargo-build-system.scm (%standard-phases): Likewise.
* guix/build/cmake-build-system.scm (%standard-phases): Likewise.
* guix/build/dub-build-system.scm (%standard-phases): Likewise.
* guix/build/emacs-build-system.scm (%standard-phases): Likewise.
* guix/build/font-build-system.scm (%standard-phases): Likewise.
* guix/build/go-build-system.scm (%standard-phases): Likewise.
* guix/build/haskell-build-system.scm (%standard-phases): Likewise.
* guix/build/minify-build-system.scm (%standard-phases): Likewise.
* guix/build/ocaml-build-system.scm (%standard-phases): Likewise.
* guix/build/perl-build-system.scm (%standard-phases): Likewise.
* guix/build/python-build-system.scm (%standard-phases): Likewise.
* guix/build/r-build-system.scm (%standard-phases): Likewise.
* guix/build/ruby-build-system.scm (%standard-phases): Likewise.
* guix/build/scons-build-system.scm (%standard-phases): Likewise.
* guix/build/texlive-build-system.scm (%standard-phases): Likewise.
* guix/build/waf-build-system.scm (%standard-phases): Likewise.
* gnu/packages/audio.scm (faad2)[arguments]: Replace 'bootstrap.
(soundtouch, cuetools, bluez-alsa): Remove 'arguments'.
(cava)[arguments]: Replace 'bootstrap.
* gnu/packages/backup.scm (rdup): Remove 'bootstrap.
* gnu/packages/bioinformatics.scm (seek)[arguments]: Replace
'bootstrap.
* gnu/packages/bioinformatics.scm (htslib-for-sambamba): Remove
'arguments'.
* gnu/packages/ci.scm (hydra, cuirass): Remove 'bootstrap'.
* gnu/packages/crypto.scm (libb2): Remove #:phases.
* gnu/packages/databases.scm (guile-wiredtiger): Likewise.
* gnu/packages/debug.scm (stress-make): Remove 'bootstrap'.
* gnu/packages/documentation.scm (asciidoc): Likewise.
* gnu/packages/fontutils.scm (libuninameslist): Remove 'arguments'.
* gnu/packages/ftp.scm (weex): Remove 'arguments'.
* gnu/packages/game-development.scm (ois): Remove 'arguments'.
* gnu/packages/games.scm (pioneer): Remove 'bootstrap.
* gnu/packages/gnome.scm (vte-ng, byzanz): Replace 'bootstrap.
(arc-theme): Remove 'arguments'.
(faba-icon-theme): Remove 'bootstrap.
(arc-icon-theme): Remove 'arguments'.
* gnu/packages/gnunet.scm (guile-gnunet): Likewise.
* gnu/packages/gtk.scm (guile-rsvg): Likewise.
* gnu/packages/guile.scm (mcron2): Remove 'bootstrap.
(guile-bash): Remove #:phases.
(guile-git): Remove 'bootstrap.
(guile-syntax-highlight): Remove 'arguments'.
(guile-sjson): Likewise.
* gnu/packages/java.scm (classpath-devel): Remove 'bootstrap.
* gnu/packages/kodi.scm (libdvdnav/kodi)
(libdvdread/kodi, libdvdcss/kodi): Likewise.
* gnu/packages/libreoffice.scm (hunspell): Remove 'arguments'.
* gnu/packages/libusb.scm (hidapi): Likewise.
* gnu/packages/linux.scm (bridge-utils): Rename 'bootstrap' to
'patch-stuff'; move it before 'bootstrap', without autoreconf
invocation.
(eudev): Rename 'bootstrap' to 'patch-file-names', without 'autogen.sh'
invocation; move it before 'bootstrap.
(gpm): Replace 'bootstrap'.
(f2fs-tools): Remove 'arguments'.
(rng-tools): Remove #:phases.
* gnu/packages/messaging.scm (hexchat): Rename 'bootstrap' to
'copy-intltool-makefile'; remove "autoreconf" invocation and move before
'bootstrap'.
(libmesode): Remove 'arguments'.
(libstrophe): Likewise.
* gnu/packages/microcom.scm (microcom): Likewise.
* gnu/packages/networking.scm (libnet): Remove 'bootstrap.
* gnu/packages/onc-rpc.scm (libnsl): Remove 'arguments'.
* gnu/packages/package-management.scm (guix): Replace 'bootstrap.
* gnu/packages/sawfish.scm (librep): Remove 'arguments'.
* gnu/packages/version-control.scm (findnewest): Likewise.
* gnu/packages/video.scm (liba52, handbrake, motion): Replace
'bootstrap.
* gnu/packages/web.scm (fcgiwrap): Remove #:phases.
(tidy): Replace 'bootstrap.
(gumbo-parser): Remove #:phases.
* gnu/packages/wget.scm (wget2): Replace 'bootstrap.
* gnu/packages/wm.scm (i3lock-color): Remove #:phases.
* gnu/packages/xdisorg.scm (xclip): Likewise.
* gnu/packages/xml.scm (libxls): Replace 'bootstrap'.
* gnu/packages/xorg.scm (xf86-video-freedreno)
(xf86-video-intel): Remove #:phases.
* gnu/packages/zile.scm (zile-on-guile): Replace 'bootstrap.
 2018-03-11 22:04:40 +01:00
Marius Bakke 7fa9cca84a
gnu: rocksdb: Update to 5.10.4. 
* gnu/packages/databases.scm (rocksdb): Update to 5.10.4.
[source]: Substitute the unbundled copy of GNU Parallel.
[arguments]: Add "V=1" "USE_RTTI=1" and
"ROCKSDBTESTS_END=db_tailing_iter_test" to #:make-flags.  Set #:test-target to
"check_some".  Respect parallel jobs in 'build-release-libraries' phase and
rename to 'build'.
[license]: Update for changes in 5.5.4.
 2018-03-04 17:54:39 +01:00
Efraim Flashner c553b08b49
gnu: python-apsw: Use invoke. 
* gnu/packages/databases.scm (python-apsw)[arguments]: Use invoke.
 2018-03-04 12:05:14 +02:00
Efraim Flashner f5c847ebd0
gnu: python-apsw: Declare a source file-name. 
* gnu/packages/databases.scm (python-apsw)[source]: Declare a source
file-name.
 2018-03-04 12:05:14 +02:00
Leo Famulari 703a8b7dc5
gnu: postgresql@9.6: Update to 9.6.8 [fixes CVE-2018-1058]. 
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.8.
 2018-03-01 20:01:48 -05:00
Leo Famulari bb17b2be49
gnu: postgresql: Update to 10.3 [fixes CVE-2018-1058]. 
* gnu/packages/databases.scm (postgresql): Update to 10.3.
 2018-03-01 20:01:48 -05:00
Leo Famulari e9802319f7
gnu: memcached: Update to 1.5.6. 
* gnu/packages/databases.scm (memcached): Update to 1.5.6.
 2018-03-01 20:00:12 -05:00
Ricardo Wurmus 29c9c9c2c1
gnu: r-rmysql: Update to 0.10.14. 
* gnu/packages/databases.scm (r-rmysql): Update to 0.10.14.
 2018-03-01 21:28:53 +01:00
Marius Bakke ff856cfdcc
gnu: python-pickleshare: Run the tests. 
* gnu/packages/databases.scm (python-pickleshare)[arguments]: Replace CHECK-PHASE.
[native-inputs]: Add PYTHON-PYTEST.
 2018-02-26 04:50:30 +01:00
Marius Bakke ed519b3c1f
gnu: python-pickleshare: Update to 0.7.4. 
* gnu/packages/databases.scm (python-pickleshare): Update to 0.7.4.
[source](uri): Use PYPI-URI.
[propagated-inputs]: Remove.
[properties]: Delay python2 variant.
(python2-pickleshare)[propagated-inputs]: Add PYTHON2-PATHLIB2.
 2018-02-26 04:49:52 +01:00
Ludovic Courtès cff07bde98
gnu: sqlite: Fix source URL. 
* gnu/packages/databases.scm (sqlite)[source]: Change "/2017" to
"/2018".
 2018-02-24 23:11:49 +01:00
Marius Bakke eaa7b9664e
gnu: gdbm: Update to 1.14. 
* gnu/packages/databases.scm (gdbm): Update to 1.14.
 2018-02-20 19:54:24 +01:00
Marius Bakke e83f62f947
gnu: sqlite: Update to 3.22.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.22.0.
 2018-02-20 16:01:46 +01:00
Mark H Weaver 150062f190
Merge branch 'master' into core-updates 2018-02-16 13:14:26 -05:00
Tobias Geerinckx-Rice 8c078ddec4
gnu: perl-dbd-pg: Update to 3.7.4. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.4.
 2018-02-16 11:15:02 +01:00
Mark H Weaver efe2a2833c
Merge branch 'master' into core-updates 2018-02-09 01:46:34 -05:00
Leo Famulari 2c433a1612
gnu: postgresql: Update to 10.2 [CVE-2018-{1052,1053}]. 
* gnu/packages/databases.scm (postgresql): Update to 10.2.
 2018-02-08 17:47:52 -05:00
Mark H Weaver e7ca634912
Merge branch 'master' into core-updates 2018-02-03 22:46:07 -05:00
Christopher Baines 9b32bf6e6c
gnu: Fix and improve the mongo-tools package. 
The hash of the source for this package is wrong. Most probably because the
source was changed from a tarball to a git repository without updating the
hash. Fixing this seems to break the check phase, so I rewrote that as well,
making changes to the build and install phases as needed.

* gnu/packages/databases.scm (mongo-tools)[source]: Update the hash value.
  [arguments]: Remove the different unpack path, as this isn't necessary when
  using the git repository as a source. Move the list of tools to make it
  accessible from multiple phases. Rewrite the build phase, getting it to
  install the tools in to the location the tests seem to expect to find
  them. Replace the check phase to run the tests for each tool
  individually. Add an install phase to install the tools, now that go install
  is not being run in the build phase.
  [native-inputs]: Add go-github.com-smartystreets-goconvey as a native-input
  as this is required for running the tests.
 2018-02-01 20:21:25 +00:00
Marius Bakke bee7bb315c
Merge branch 'master' into core-updates 2018-02-01 13:18:47 +01:00
Christopher Baines 33c88fcb25
gnu: Add mongo-tools. 
* gnu/packages/databases.scm (mongo-tools): New variable.
 2018-01-30 07:41:31 +00:00
Christopher Baines 5807172300
gnu: Add go-gopkg.in-mgo.v2. 
* gnu/packages/databases.scm (go-gopkg.in-mgo.v2): New variable.
 2018-01-30 07:41:30 +00:00
Mark H Weaver b9ed5ef3fb
gnu: Add sqlite-with-fts5. 
* gnu/packages/databases.scm (sqlite-with-fts5): New variable.
 2018-01-28 00:23:32 -05:00
Mark H Weaver b89d8a4271
Merge branch 'master' into core-updates 2018-01-26 00:15:26 -05:00
Tobias Geerinckx-Rice bbf9092b9d
gnu: 4store: Update URI. 
* gnu/packages/databases.scm (4store)[source, home-page]: Update URI.
 2018-01-26 00:09:19 +01:00
Mark H Weaver e074a655dd
Merge branch 'master' into core-updates 2018-01-19 23:59:20 -05:00
Efraim Flashner 8d7b476ba9
gnu: mongodb: Fix indentation. 
* gnu/packages/databases.scm (mongodb): Replace tabs with spaces.
 2018-01-18 15:12:04 +02:00
Efraim Flashner 7f6a607e2a
gnu: mysql: Update to 5.7.21. 
* gnu/packages/databases.scm (mysql): Update to 5.7.21.
 2018-01-18 15:12:02 +02:00
Christopher Baines 0076f5a98c
gnu: Remove redundant wrapping from packages using ruby-build-system. 
Now that the build system does wrapping automatically, it can be removed from
the packages that do it manually.

* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove #:phases.
* gnu/packages/ruby.scm (ruby-redcloth)[arguments]: Remove #:phases.
  (ruby-httpclient)[arguments]: Remove 'wrap-bin-httpclient from the modified
  phases.
 2018-01-14 22:16:26 +00:00
Christopher Baines 3cb3fa6747
guix: build: ruby-build-system: Install to the vendor directory 
* guix/build/ruby-build-system.scm (install): Install gems to the vendor
  directory, rather than the GEM_HOME. The vendor directory does not include
  the version of ruby used to install the gem in the path, which makes it
  easier to add it to the GEM_PATH for all versions of ruby to use.
  (gem-home): Remove procedure.
* gnu/packages/ruby.scm (ruby, ruby-2.1)[native-search-paths]: Switch to
  lib/ruby/vendor_ruby.
  (ruby-1.8)[native-search-paths]: Remove native-search-paths.
  (gem-directory): Remove procedure.
  (ruby-ansi, ruby-ae)[arguments]: Remove use of gem-directory.
  (ruby-metaclass, ruby-instantiator, ruby-introspection, ruby-mocha,
  ruby-nokogiri, ruby-minitest-tu-shim, ruby-redcloth)[arguments]: Remove use
  of gem-home.
  (ruby-git, ruby-httpclient)[arguments]: Remove use of GEM_HOME.
* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove use of
  GEM_HOME.
 2018-01-14 22:16:08 +00:00
Leo Famulari 4adb40bffc
Merge branch 'master' into core-updates 2018-01-11 14:22:50 -08:00
amirouche 3926a099b4
gnu: guile-wiredtiger: Update to 0.6.3. 
* gnu/package/databases.scm (guile-wiredtiger): Update to 0.6.3.
[arguments]: Enable tests; disable parallel tests; remove
'remove-bundled-dependencies' phase.
[synopsis, description]: Improve them.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2018-01-08 12:46:53 -05:00
Efraim Flashner 23de2e1d5f
Merge remote-tracking branch 'origin/master' into core-updates 2017-12-31 14:10:25 +02:00
Christopher Baines 90205b625e
gnu: Run some tests in the mongodb package check phase. 
Previously the mongodb dbtests and unittests were only built, and not actually
run.

* gnu/packages/databases.scm (mongodb)[native-inputs]: Add python2-minimal,
  python2-pymongo and python2-pyyaml for running the resmoke.py program, and
  add tzdata as some tests fail without this.
  [arguments]: Run the tests through the resmoke.py script in the check phase,
  set TZDIR as a couple of tests seem to depend on this, add a comment about
  the resource requirements of the tests, as they require a large amount of
  disk space, and disable the async_stream_test, as it seems to hang.
 2017-12-27 13:28:34 +00:00
Christopher Baines a469c69508
gnu: Build wiredtiger with builtin compressors. 
WiredTiger is used by MongoDB, and it seems to require it to be built with
builtin support for snappy compression.

* gnu/packages/databases.scm (wiredtiger)[arguments]: Replace --enable-zlib
  and --enable-snappy with --with-builtins=snappy,zlib.
 2017-12-27 13:28:24 +00:00
Tobias Geerinckx-Rice 53ae35e443
gnu: python-sqlalchemy-utils: Update to 0.32.21. 
* gnu/packages/databases.scm (python-sqlalchemy-utils): Update to 0.32.21.
 2017-12-26 16:44:52 +01:00
Tobias Geerinckx-Rice bcdc5caed7
gnu: python-sadisplay: Update to 0.4.8. 
* gnu/packages/databases.scm (python-sadisplay): Update to 0.4.8.
 2017-12-26 16:43:57 +01:00
Tobias Geerinckx-Rice a7f27da7f2
gnu: check, databases: Use HTTPS for bitbucket.org. 
* gnu/packages/check.scm (python-pytest-capturelog)[home-page]: Likewise.
* gnu/packages/databases.scm (python-alembic)[home-page]: Likewise.
 2017-12-26 02:27:42 +01:00
Tobias Geerinckx-Rice 08455a3464
gnu: python-redis: Update to 2.10.6. 
* gnu/packages/databases.scm (python-redis): Update to 2.10.6.
 2017-12-26 02:03:41 +01:00
Tobias Geerinckx-Rice 030274ccac
gnu: python-alembic: Update to 0.9.6. 
* gnu/packages/databases.scm (python-alembic): Update to 0.9.6.
 2017-12-26 02:03:41 +01:00
Christopher Baines 3faa422d5f
gnu: Build wiredtiger with snappy support. 
This is probably necessary to get the MongoDB package in Guix to successfully
use the Guix wiredtiger package, as MongoDB it uses wiredtiger with snappy by
default.

* gnu/packages/databases.scm (wiredtiger)[arguments]: Add --enable-snappy to
  #:configure-flags.
  [inputs]: Add snappy.
 2017-12-22 19:23:53 +00:00
Leo Famulari 0054564b85
gnu: mariadb: Update to 10.1.29. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.29.
 2017-12-22 10:53:50 -05:00
Marius Bakke 32cd878be0
Merge branch 'master' into core-updates 2017-12-19 01:42:40 +01:00
Efraim Flashner 439980b707
gnu: perl-sql-abstract: Update source uri. 
* gnu/packages/databases.scm (perl-sql-abstract)[source]: Update source uri.
 2017-12-10 11:35:28 +02:00
Marius Bakke 9e111db453
Merge branch 'master' into core-updates 2017-12-07 18:26:11 +01:00
Tobias Geerinckx-Rice b10ac21511
gnu: perl-dbd-pg: Update to 3.7.0. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.0
 2017-12-07 02:59:24 +01:00
Tobias Geerinckx-Rice 47b059197d
gnu: perl-sql-abstract: Update to 1.84. 
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.84
 2017-12-07 02:59:24 +01:00
Tobias Geerinckx-Rice b2b995622a
gnu: perl-dbix-class-schema-loader: Update to 0.07047. 
* gnu/packages/databases.scm (perl-dbix-class-schema-loader): Update to
0.07047
 2017-12-07 02:59:17 +01:00
Tobias Geerinckx-Rice 84a0008ae7
gnu: perl-dbi: Update to 1.637. 
* gnu/packages/databases.scm (perl-dbi): Update to 1.637
 2017-12-07 02:57:28 +01:00
Marius Bakke 77181815ae
Merge branch 'master' into core-updates 2017-12-05 23:41:30 +01:00
Arun Isaac 6e385b76e6
gnu: mongodb: Use scons-build-system. 
* gnu/packages/databases.scm (mongodb): Switch to scons-build-system.
 2017-11-30 18:21:23 +05:30
Efraim Flashner 51b0f09e05
gnu: mongodb: Remove some bundled sources. 
* gnu/packages/databases.scm (mongodb)[source]: Add snippet to remove
some of the bundled sources.
[input]: Remove unused boost input.
 2017-11-26 14:16:08 +02:00
Efraim Flashner 319b52c382
gnu: mongodb: Use system wiredtiger when available. 
* gnu/packages/databases.scm (mongodb)[inputs]: Add wiredtiger on
64-bit systems.
[arguments]: When using wiredtiger, use system wiredtiger.
 2017-11-26 14:16:08 +02:00
Efraim Flashner 29cfbfca43
gnu: mongodb: Build without wiredtiger on 32-bit systems. 
* gnu/packages/databases.scm (mongodb)[arguments]: Add a configure-flag
to build without wiredtiger support on 32-bit systems.
 2017-11-26 14:16:04 +02:00
Leo Famulari f1c49e75f4
gnu: mongodb: Update to 3.4.10. 
* gnu/packages/databases.scm (mongodb): Update to 3.4.10.
 2017-11-25 20:28:11 -05:00
Danny Milosavljevic 41916bea1b
gnu: Add python-pyodbc. 
* gnu/packages/databases.scm (python-pyodbc, python2-pyodbc): New variables.
 2017-11-20 20:47:59 +01:00
Marius Bakke 2dd12924cf
Merge branch 'master' into core-updates 2017-11-19 15:01:00 +01:00
Ricardo Wurmus a8714bf680
gnu: Move database packages from python.scm to databases.scm. 
* gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite,
python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils,
python2-sqlalchemy-utils, python-alembic, python2-alembic,
python-pickleshare, python2-pickleshare, python-apsw, python2-apsw,
python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2,
python-sadisplay, python2-sadisplay, python-mysqlclient,
python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis,
python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq,
python-trollius-redis, python2-trollius-redis, python-sqlparse,
python2-sqlparse, python-sql, python2-sql): Move from here...
* gnu/packages/databases.scm: ...to here.
* gnu/packages/tryton.scm,
gnu/packages/python-web.scm,
gnu/packages/nutrition.scm,
gnu/packages/medical.scm: Adjust accordingly.
 2017-11-17 22:36:27 +01:00
Kristofer Buffington 1697307185
gnu: Add guile-wiredtiger. 
* gnu/packages/databases.scm (guile-wiredtiger): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-14 23:46:53 +01:00
Ricardo Wurmus 5ccde2079e
gnu: Move test packages from perl to perl-check. 
* gnu/packages/perl.scm (perl-test2-bundle-extended,
perl-test2-plugin-nowarnings, perl-test-base, perl-test-class,
perl-test-class-most, perl-test-cleannamespaces, perl-test-command,
perl-test-cpan-meta, perl-test-cpan-meta-json, perl-test-deep,
perl-test-differences, perl-test-directory, perl-test-eol,
perl-test-exception, perl-test-fatal, perl-test-file-sharedir-dist,
perl-test-files, perl-test-harness, perl-test-leaktrace,
perl-test-longstring, perl-test-manifest, perl-test-memory-cycle,
perl-test-mockobject, perl-test-mocktime, perl-test-most, perl-test-needs,
perl-test-notabs, perl-test-nowarnings, perl-test-number-delta,
perl-test-output, perl-test-pod, perl-test-pod-coverage, perl-test-requires,
perl-test-script, perl-test-sharedfork, perl-test-simple, perl-test-taint,
perl-test-tester, perl-test-trap, perl-test-utf8, perl-test-warn,
perl-test-warnings, perl-test-without-module, perl-test-writevariants,
perl-test-yaml, perl-test-trailingspace): Move variables to ...
* gnu/packages/perl-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/glib.scm,
gnu/packages/gnupg.scm,
gnu/packages/image-viewers.scm,
gnu/packages/language.scm,
gnu/packages/networking.scm,
gnu/packages/package-management.scm,
gnu/packages/perl.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/version-control.scm,
gnu/packages/web.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm: Use perl-check module.
 2017-11-13 23:03:01 +01:00
Efraim Flashner 179b7ac66d
gnu: postgresql@9.6: Update to 9.6.6 [security fixes]. 
This fixes CVE-2017-12172, CVE-2017-15098, CVE-2017-15099.

* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.6.
 2017-11-10 10:24:13 +02:00
Rutger Helling 1d8e73ba67
gnu: postgresql: Update to 10.1 [security fixes]. 
Fixes CVE-2017-12172, CVE-2017-15098 and CVE-2017-15099.

* gnu/packages/databases.scm (postgresql): Update to 10.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-10 01:22:53 +01:00
Ricardo Wurmus 74248d22a0
gnu: Add r-rmysql. 
* gnu/packages/databases.scm (r-rmysql): New variable.
 2017-11-07 08:15:43 +01:00
Marius Bakke aa70cf8c36
gnu: redis: Update to 4.0.2. 
* gnu/packages/databases.scm (redis): Update to 4.0.2.
 2017-11-05 19:03:32 +01:00
Marius Bakke 4527a97fac
gnu: sqlite: Update to 3.21.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.21.0.
 2017-11-01 23:35:12 +01:00
Efraim Flashner eda8a841ac
Merge remote-tracking branch 'origin/python-updates' into core-updates 2017-10-26 12:45:11 +03:00
Tobias Geerinckx-Rice b7883b111d
Merge branch 'master' into core-updates 2017-10-25 20:02:08 +02:00
Ricardo Wurmus 6a23c8b183
gnu: Add sqlite-with-fts3. 
* gnu/packages/databases.scm (sqlite-with-fts3): New variable.

Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>
 2017-10-25 15:13:38 +02:00
Marius Bakke ca4fd41de8
Merge branch 'master' into core-updates 2017-10-24 22:00:23 +02:00
Tobias Geerinckx-Rice 57af0d13b2
gnu: python-lmdb: Update to 0.93. 
* gnu/packages/databases.scm (python-lmdb): Update to 0.93.
 2017-10-23 14:49:32 +02:00
Tobias Geerinckx-Rice afd845368a
gnu: python-peewee: Update to 2.10.2. 
* gnu/packages/databases.scm (python-peewee): Update to 2.10.2.
 2017-10-23 14:49:31 +02:00
Marius Bakke 119a749db9
Merge branch 'master' into core-updates 2017-10-22 20:12:52 +02:00
Leo Famulari 48f8b07082
gnu: mysql: Update to 5.7.20. 
* gnu/packages/databases.scm (mysql): Update to 5.7.20.
 2017-10-20 15:36:42 -04:00
Marius Bakke 928da609b5
gnu: Remove python-pytest@2. 
* gnu/packages/python.scm (python-pytest): Update to 3.0.7.
[source]: Move substitution to ...
[arguments]: ... here. Incorporate phase from pytest-3.0.
[native-inputs]: Add PYTHON-HYPOTHESIS.
(python-pytest-3.0): Remove variable.
(python2-pytest-3.0): Rename to ...
(python2-pytest): ... this.
[native-inputs]: Add PYTHON2-ENUM34.
* gnu/packages/backup.scm (borg)[native-inputs]: Replace PYTHON-PYTEST-3.0
with PYTHON-PYTEST.
* gnu/packages/calendar.scm (khal): Likewise.
* gnu/packages/databases.scm (python-orator): Likewise.
* gnu/packages/python.scm (python-sphinx-1.6, python-sphinx-1.5.3,
python-pexpect, python-cryptography, python-pyopenssl, python-pytest-warnings,
python-pytest-capturelog, python-pytest-catchlog, python-marshmallow,
python-apispec, python-flasgger, python-pyjwt, python-grako,
python-honcho): Likewise.
* gnu/packages/web.scm (python-internetarchive): Likewise.
 2017-10-19 00:16:49 +02:00
Thomas Danckaert 8cff2e7aed
Merge 'master' into core-updates 2017-10-16 19:52:30 +02:00
Efraim Flashner 7658d89bb7
gnu: Add postgresql@9.6. 
* gnu/packages/databases.scm (postgresql@9.6): New variable.
 2017-10-12 23:39:35 +03:00
Marius Bakke c01ef97594
Merge branch 'master' into core-updates 2017-10-10 22:33:28 +02:00
Marius Bakke 1c055d7258
Merge branch 'staging' 2017-10-10 21:44:32 +02:00
Rutger Helling 231123ee16
gnu: postgresql: Update to 10.0. 
* gnu/packages/databases.scm (postgresql): Update to 10.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-10 10:33:26 -04:00
Marius Bakke ad3a937dae
Merge branch 'master' into staging 2017-10-07 12:54:40 +02:00
Christopher Baines 6bbbca9073
gnu: Add mongodb. 
* gnu/packages/databases.scm (mongodb): New variable.
 2017-10-06 21:24:23 +01:00
Marius Bakke 7716ccd59c
Merge branch 'master' into staging 2017-10-05 00:45:38 +02:00
Efraim Flashner 48b68c6178
gnu: virtuoso-ose: Limit to 64-bit platforms. 
* gnu/packages/databases.scm (virtuoso-ose)[supported-systems]: New field.
 2017-10-04 10:51:19 +03:00
Roel Janssen 61ce0998e0
gnu: Add virtuoso-ose. 
* gnu/packages/databases.scm (virtuoso-ose): New variable.
 2017-10-03 15:36:05 +02:00
Efraim Flashner 64df08f0cf
Merge remote-tracking branch 'origin/master' into core-updates 2017-10-01 22:16:22 +03:00
Christopher Baines afcbb02057
gnu: Add ruby-es-dump-restore. 
* gnu/packages/databases.scm (es-dump-restore): New variable.
 2017-09-30 11:46:10 +01:00
Marius Bakke 595dcd48a9
gnu: bdb: Update to 6.2.32. 
* gnu/packages/databases.scm (bdb): Update to 6.2.32.
 2017-09-21 20:33:56 +02:00
Kei Kebreau dc1d3cdef7
gnu: Use 'modify-phases' syntax. 
* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal,
wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use
'modify-phases' syntax.
* gnu/packages/algebra.scm (arb)[arguments]: Likewise.
* gnu/packages/apr.scm (apr-util)[arguments]: Likewise.
* gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano,
lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound,
zita-convolver, zita-alsa-pcmi)[arguments]: Likewise.
* gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express,
flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise.
* gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise.
* gnu/packages/compression.scm (sharutils)[arguments]: Likewise.
* gnu/packages/conky.scm (conky)[arguments]: Likewise.
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise.
* gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise.
* gnu/packages/display-managers.scm (slim)[arguments]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise.
* gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise.
* gnu/packages/engineering.scm (pcb)[arguments]: Likewise.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise.
* gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise.
* gnu/packages/fltk.scm (fltk)[arguments]: Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise.
* gnu/packages/gd.scm (perl-gd)[arguments]: Likewise.
* gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise.
* gnu/packages/glib.scm (glibmm)[arguments]: Likewise.
* gnu/packages/gl.scm (glew)[arguments]: Likewise.
* gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs,
libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise.
* gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise.
* gnu/packages/graphics.scm (agg)[arguments]: Likewise.
* gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present,
python2-pycairo)[arguments]: Likewise.
* gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise.
* gnu/packages/hugs.scm (hugs)[arguments]: Likewise.
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal)
[arguments]: Likewise.
* gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise.
* gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static,
lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools)
[arguments]: Likewise.
* gnu/packages/lisp.scm (ccl)[arguments]: Likewise.
* gnu/packages/lout.scm (lout)[arguments]: Likewise.
* gnu/packages/lua.scm (luajit)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise.
* gnu/packages/mail.scm (exim)[arguments]: Likewise.
* gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise.
* gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun)
[arguments]: Likewise.
* gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise.
* gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise.
* gnu/packages/music.scm (solfege)[arguments]: Likewise.
* gnu/packages/noweb.scm (noweb)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]:
Likewise.
* gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise.
* gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]:
Likewise.
* gnu/packages/photo.scm (gphoto2)[arguments]: Likewise.
* gnu/packages/popt.scm (popt)[arguments]: Likewise.
* gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]:
Likewise.
* gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise.
* gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy,
python-sqlalchemy, python-docopt)[arguments]: Likewise.
* gnu/packages/rdf.scm (lrdf)[arguments]: Likewise.
* gnu/packages/regex.scm (tre)[arguments]: Likewise.
* gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise.
* gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise.
* gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise.
* gnu/packages/scheme.scm (racket)[arguments]: Likewise.
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise.
* gnu/packages/serveez.scm (serveez)[arguments]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise.
* gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise.
* gnu/packages/tcl.scm (expect)[arguments]: Likewise.
* gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise.
* gnu/packages/textutils.scm (recode, libgtextutils)[arguments]:
Likewise.
* gnu/packages/time.scm (time)[arguments]: Likewise.
* gnu/packages/tor.scm (privoxy)[arguments]: Likewise.
* gnu/packages/uucp.scm (uucp)[arguments]: Likewise.
* gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise.
* gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
* gnu/packages/wicd.scm (wicd)[arguments]: Likewise.
* gnu/packages/wm.scm (bspwm)[arguments]: Likewise.
* gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise.
* gnu/packages/xfce.scm (xfconf)[arguments]: Likewise.
* gnu/packages/xfig.scm (transfig)[arguments]: Likewise.
* gnu/packages/xorg.scm (imake)[arguments]: Likewise.
 2017-09-20 20:58:04 -04:00
Ben Woodcroft da1f7a9e16
gnu: python-orator: Move to (gnu packages databases). 
* gnu/packages/python.scm: Remove (gnu packages time) import.
(python-orator, python2-orator): Move from here ...
* gnu/packages/databases.scm: ... to here.
 2017-09-17 11:07:46 +10:00
Jelle Licht accf6c6acc
gnu: sqlite: Update to 3.20.1. 
* gnu/packages/databases.scm (sqlite): Update to 3.20.1.
 2017-09-11 16:29:50 +02:00
Kei Kebreau d10092b849
gnu: Put autoconf-related phases immediately after the 'unpack phase. 
* gnu/packages/audio.scm (audacity, rtmidi)[arguments]: Correct phases
accordingly.
* gnu/packages/bioinformatics.scm (mash, seek, vsearch, emboss,
htslib-for-sambamba)[arguments]: Likewise.
* gnu/packages/ci.scm (cuirass)[arguments]: Likewise.
* gnu/packages/compression.scm (minizip, xdelta)[arguments]: Likewise.
* gnu/packages/cpp.scm (libzen)[arguments]: Likewise.
* gnu/packages/crypto.scm (opendht)[arguments]: Likewise.
* gnu/packages/databases.scm (4store, mdbtools)[arguments]: Likewise.
* gnu/packages/debug.scm (stress-make)[arguments]: Likewise.
* gnu/packages/dns.scm (dnscrypt-proxy, dnscrypt-wrapper)[arguments]:
Likewise.
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[arguments]: Likewise.
* gnu/packages/engineering.scm (gerbv)[arguments]: Likewise.
* gnu/packages/erlang.scm (erlang)[arguments]: Likewise.
* gnu/packages/ftp.scm (weex)[arguments]: Likewise.
* gnu/packages/gnome.scm (dia)[arguments]: Likewise.
* gnu/packages/gnunet.scm (gnurl, guile-gnunet)[arguments]: Likewise.
* gnu/packages/gtk.scm (guile-rsvg, graphene)[arguments]: Likewise.
* gnu/packages/guile.scm (guildhall, guile-ics, guile-sqlite3)[arguments]:
Likewise.
* gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Likewise.
* gnu/packages/irc.scm (weechat)[arguments]: Likewise.
* gnu/packages/java.scm (classpath-devel)[arguments]: Likewise.
* gnu/packages/libreoffice.scm (libetonyek)[arguments]: Likewise.
* gnu/packages/libusb.scm (hidapi)[arguments]: Likewise.
* gnu/packages/linux.scm (gpm)[arguments]: Likewise.
* gnu/packages/logging.scm (glog)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Likewise.
* gnu/packages/mail.scm (dovecot-trees, dovecot-libsodium-plugin, esmtp)
[arguments]: Likewise.
* gnu/packages/messaging.scm (freetalk, libmesode, libstrophe)[arguments]:
Likewise.
* gnu/packages/microcom.scm (microcom)[arguments]: Likewise.
* gnu/packages/ocaml.scm (ocaml-ssl)[arguments]: Likewise.
* gnu/packages/parallel.scm (slurm)[arguments]: Likewise.
* gnu/packages/pdf.scm (libharu)[arguments]: Likewise.
* gnu/packages/samba.scm (cifs-utils)[arguments]: Likewise.
* gnu/packages/serialization.scm (msgpack)[arguments]: Likewise.
* gnu/packages/shells.scm (scsh)[arguments]: Likewise.
* gnu/packages/telephony.scm (libiax2)[arguments]: Likewise.
* gnu/packages/textutils.scm (dotconf)[arguments]: Likewise.
* gnu/packages/version-control.scm (findnewest)[arguments]: Likewise.
* gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Likewise.
 2017-09-04 00:10:59 -04:00
Efraim Flashner 7d099cbe13
gnu: mysql: Enable tests on aarch64. 
* gnu/packages/databases.scm (mysql)[arguments]: Remove logic disabling
the tests on aarch64-linux.
 2017-09-01 10:50:39 +03:00
Marius Bakke ff54f194f3
gnu: postgresql: Update to 9.6.5. 
* gnu/packages/databases.scm (postgresql): Update to 9.6.5.

Release-notes: https://www.postgresql.org/docs/9.6/static/release-9-6-5.html
 2017-08-31 21:34:20 +02:00
Marius Bakke fab46af832
gnu: tdb: Update to 1.3.15. 
* gnu/packages/databases.scm (tdb): Update to 1.3.15.
 2017-08-27 15:07:21 +02:00
Marius Bakke 2f837cf7fe
gnu: perl: Add more missing dependencies on Module::Install. 
* gnu/packages/databases.scm (perl-dbix-class, perl-dbix-class-cursor-cached,
  perl-dbix-class-introspectablem2m,
  perl-dbix-class-schema-loader)[native-inputs]: Add PERL-MODULE-INSTALL.
* gnu/packages/web.scm (perl-catalyst-action-renderview,
  perl-catalyst-action-rest, perl-catalyst-authentication-store-dbix-class,
  perl-catalyst-component-instancepercontext, perl-catalyst-model-dbic-schema,
  perl-catalyst-plugin-authentication,
  perl-catalyst-plugin-authorization-roles, perl-catalyst-plugin-configloader,
  perl-catalyst-plugin-session, perl-catalyst-plugin-session-state-cookie,
  perl-catalyst-plugin-stacktrace, perl-catalyst-plugin-static-simple,
  perl-catalyst-traitfor-request-proxybase, perl-catalyst-view-download,
  perl-catalyst-view-json, perl-catalystx-script-server-starman,
  perl-test-www-mechanize, perl-test-www-mechanize-catalyst)[native-inputs]:
  Likewise.
* gnu/packages/xorg.scm (perl-x11-xcb)[native-inputs]: Likewise.
 2017-08-25 22:24:10 +02:00
Marius Bakke 2718a9cd09
Merge branch 'master' into core-updates 2017-08-21 02:40:37 +02:00
Alex Vong f30ff28b96
gnu: mariadb: Update to 10.1.26 [fixes CVE-2017-{3636,3641,3653}]. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.26.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-08-17 11:40:29 -04:00
Mark H Weaver 3785e42e52
Merge branch 'master' into core-updates 2017-08-11 03:49:24 -04:00
Marius Bakke 1a1558e88f
gnu: postgresql: Update to 9.6.4 [fixes CVE-2017-{7546,7547,7548}]. 
See <https://www.postgresql.org/about/news/1772/> for more information.

* gnu/packages/databases.scm (postgresql): Update to 9.6.4.
 2017-08-10 22:23:31 +02:00
Marius Bakke aa9780daf9
Merge branch 'master' into core-updates 2017-08-01 23:42:28 +02:00
Marius Bakke 9dab50179a
gnu: perl: Add missing dependencies on Module::Install. 
Perl 5.26 and later does not provide this module.

* gnu/packages/databases.scm (perl-sql-abstract)[native-inputs]: Add PERL-MODULE-INSTALL.
* gnu/packages/perl.scm (perl-moosex-emulate-class-accessor-fast,
perl-file-zglob, perl-object-signature, perl-test-utf8, perl-time-duration,
perl-benchmark-timer, perl-class-accessor-grouped,
perl-class-c3-componentised, perl-term-encoding)[native-inputs]: Likewise.
* gnu/packages/web.scm (perl-http-parser-xs, perl-uri-template,
perl-www-curl)[native-inputs]: Likewise.
* gnu/packages/xml.scm (perl-xml-atom)[native-inputs]: Likewise.
 2017-07-30 14:55:27 +02:00
Christopher Baines 686144e986
gnu: Add memcached. 
* gnu/packages/databases.scm (memcached): New variable.
 2017-07-30 09:06:52 +01:00
Ben Woodcroft f112bd26ae
gnu: redis: Update to 4.0.1. 
* gnu/packages/databases.scm (redis): Update to 4.0.1.
 2017-07-28 21:10:49 +10:00
Ben Woodcroft 00eeb45fca
gnu: redis: Update to 4.0.0. 
* gnu/packages/databases.scm (redis): Update to 4.0.0.
 2017-07-28 20:18:52 +10:00
Marius Bakke e0b9e377f1
Merge branch 'master' into core-updates 2017-07-28 00:34:13 +02:00
Kei Kebreau c7db7b86ce
gnu: perl-dbd-mysql: Fix CVE-2017-10788. 
* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (perl-dbd-mysql)[source]: Use it.
 2017-07-25 14:11:20 -04:00
Leo Famulari e081e2dd0b
Merge branch 'master' into core-updates 2017-07-23 19:06:49 -04:00
Marius Bakke 38bb9df150
gnu: tdb: Update to 1.3.14. 
* gnu/packages/databases.scm (tdb): Update to 1.3.14.
 2017-07-23 22:01:28 +02:00
Leo Famulari 6c1a317e29
Merge branch 'master' into core-updates 2017-07-23 03:42:12 -04:00
Leo Famulari 6f226c078c
gnu: mysql: Update to 5.7.19. 
* gnu/packages/databases.scm (mysql): Update to 5.7.19.
 2017-07-21 14:50:24 -04:00
Leo Famulari c8eb2b8c60
Merge branch 'master' into core-updates 2017-07-10 14:37:53 -04:00
Leo Famulari 0ca1e77c14
gnu: perl-dbd-mysql: Update to 4.043. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.043.
 2017-07-07 20:34:52 -04:00
Marius Bakke a6a979cba3
gnu: mariadb: Update to 10.1.25. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.25.
 2017-07-06 00:15:14 +02:00
Mark H Weaver ed068b960e
Merge branch 'master' into core-updates 2017-06-26 00:00:58 -04:00
Tobias Geerinckx-Rice 07041d95b1
gnu: Add python-lmdb. 
* gnu/packages/databases.scm (python-lmdb, python2-lmdb): New variables.
 2017-06-21 21:58:39 +02:00
Tobias Geerinckx-Rice fda852ff40
gnu: lmdb: Expand description. 
* gnu/packages/databases.scm (lmdb)[synopsis]: Capitalise.
[description]: Elaborate.
 2017-06-21 21:58:38 +02:00
Mark H Weaver 9d4385634d
Merge branch 'master' into core-updates 2017-06-18 02:36:51 -04:00
Marius Bakke 9d59023e6a
gnu: kyotocabinet: Disable CPU optimizations. 
* gnu/packages/databases.scm (kyotocabinet)<#:configure-flags>: Add "--disable-opt".
 2017-06-17 15:05:03 +02:00
Tobias Geerinckx-Rice 603fd6b9a1
gnu: lmdb: Update to 0.9.21. 
* gnu/packages/databases.scm (lmdb): Update to 0.9.21.
 2017-06-15 10:34:23 +02:00
Danny Milosavljevic b7aa3f5d2e
gnu: postgresql: Enable contributed extensions. 
* gnu/packages/databases.scm (postgresql)[arguments]: Add "build-contrib",
"install-contrib" phases.  Add configure-flags.
[inputs]: Add libuuid.
 2017-06-15 09:44:17 +02:00
Marius Bakke 70eea6ea14
gnu: sqlite: Update to 3.19.3. 
This update addresses an important bug present since 3.16.0 that can cause
database corruption when auto_vacuum is enabled:

https://www.sqlite.org/src/info/fda22108

* gnu/packages/databases.scm (sqlite): Update to 3.19.3.
 2017-06-08 18:37:42 +02:00
Marius Bakke d0c45d2d82
Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/image.scm
        (incorporated libtiff graft)
 2017-06-03 17:51:21 +02:00
Marius Bakke 607b424f13
gnu: mariadb: Update to 10.1.24. 
Release notes: https://mariadb.com/kb/en/mariadb/mariadb-10124-release-notes/

* gnu/packages/databases.scm (mariadb): Update to 10.1.24.
 2017-06-01 17:48:09 +02:00
Marius Bakke b94d20c688
gnu: sqlite: Update to 3.19.2. 
* gnu/packages/databases.scm (sqlite): Update to 3.19.2.
 2017-05-25 19:54:20 +02:00
Ricardo Wurmus d1a914082b
Merge branch 'master' into core-updates 2017-05-24 12:05:47 +02:00
Marius Bakke 657fb6c947
gnu: sqlite: Update to 3.19.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.19.0.
 2017-05-22 20:42:51 +02:00
Marius Bakke 9bd42f1dc3
gnu: postgresql: Update to 9.6.3 [fixes CVE-2017-{7484,7485,7486}]. 
* gnu/packages/databases.scm (postgresql): Update to 9.6.3.
 2017-05-12 19:27:11 +02:00
Marius Bakke d7b344c5cd
gnu: rocksdb: Disable tests on 32-bit systems. 
* gnu/packages/databases.scm (rocksdb)[arguments]: Make #:tests? conditional.
Delete unnecessary 'build' phase. Move portability environment variable
before check phase.
 2017-05-12 15:00:59 +02:00
Leo Famulari 6cf8e576e9
gnu: mariadb: Update to 10.1.23 [security fixes]. 
Fixes CVE-2017-{3302,3313,3308,3309,3453,3456,3464 }.

* gnu/packages/databases.scm (mariadb): Update to 10.1.23.
[arguments]: Disable features that depend on libarchive.
 2017-05-05 16:32:09 -04:00
Petter 2f3108ad03
gnu: Avoid circular dependencies by Perl license. 
* guix/licenses.scm (perl-license): New variable.
* gnu/packages/bioinformatics.scm: Change (package-license perl) to perl-license.
* gnu/packages/compression.scm: Same.
* gnu/packages/databases.scm: Same.
* gnu/packages/gd.scm: Same.
* gnu/packages/language.scm: Same.
* gnu/packages/libevent.scm: Same.
* gnu/packages/mail.scm: Same.
* gnu/packages/messaging.scm: Same.
* gnu/packages/ncurses.scm: Same.
* gnu/packages/networking.scm: Same.
* gnu/packages/photo.scm: Same.
* gnu/packages/tcl.scm: Same.
* gnu/packages/tex.scm: Same.
* gnu/packages/tls.scm: Same.
* gnu/packages/web.scm: Same.
* gnu/packages/wm.scm: Same.
* gnu/packages/xml.scm: Same.
* gnu/packages/xorg.scm: Same.
* gnu/packages/zip.scm: Same.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-05-02 23:41:14 +02:00
Arun Isaac d39a84e80c
gnu: Add mdbtools. 
* gnu/packages/databases.scm (mdbtools): New variable.
 2017-04-27 10:15:51 +05:30
Efraim Flashner 092b7b3e69
gnu: wiredtiger: Enable building on aarch64-linux. 
* gnu/packages/databases.scm (wiredtiger)[supported-systems]: Add
aarch64-linux to supported-systems.
 2017-04-24 11:35:43 +03:00
Marius Bakke f91c677c03
gnu: rocksdb: Don't build static library. 
* gnu/packages/databases.scm (rocksdb)[arguments]<#:phases>: Add new Makefile
substitution. Remove 'delete-static-library' phase. Adjust
'build-release-libraries' phase to match.
<#:make-flags>: Remove redundant flag.
 2017-04-15 18:51:00 +02:00
Marius Bakke bf144793ae
gnu: rocksdb: Disable failing test. 
* gnu/packages/databases.scm (rocksdb)[arguments]<#:phases>: Add one more
test to 'disable-failing-tests' phase.
 2017-04-15 18:51:00 +02:00
Leo Famulari ab71ea93a4
gnu: mysql: Update to 5.7.18. 
* gnu/packages/databases.scm (mysql): Update to 5.7.18.
 2017-04-14 12:53:28 -04:00
Vasile Dumitrascu b9d38ad1bc
gnu: postgresql: Update to 9.6.2. 
* gnu/packages/databases.scm (postgresql): Update to 9.6.2.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-04-13 18:52:40 +05:30
Tobias Geerinckx-Rice dd0cfb37da
gnu: perl-db-file: Update to 1.840. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.840.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice 2273b75154
gnu: perl-dbd-sqlite: Update to 1.54. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.54.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice 4d40c6aab0
gnu: perl-dbd-pg: Update to 3.5.3. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.5.3.
 2017-04-04 00:17:28 +02:00
Marius Bakke 70800cd634
gnu: sqlite: Update to 3.18.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.18.0.
 2017-04-03 16:07:32 +02:00
Marius Bakke 821072e22b
gnu: gdbm: Update to 1.13. 
* gnu/packages/databases.scm (gdbm): Update to 1.13.
 2017-04-03 14:56:52 +02:00
Marius Bakke 84157bb8bf
Merge branch 'master' into core-updates 
Most conflicts are from 6fd52309b8.
 2017-03-30 22:59:53 +02:00
Tobias Geerinckx-Rice 6fd52309b8
gnu: Use HTTPS for almost all gnu.org HOME-PAGEs. 
All HTTP gnu.org (and supported subdomain) HOME-PAGEs changed to HTTPS.
 2017-03-30 01:30:16 +02:00
Marius Bakke 2e93ee5f1b
gnu: rocksdb: Update to 5.2.1. 
* gnu/packages/databases.scm (rocksdb): Update to 5.2.1.
 2017-03-28 17:02:04 +02:00
Efraim Flashner b4f67b7ebb
gnu: mysql: Disable tests on aarch64-linux. 
* gnu/packages/databases.scm (mysql)[arguments]: Disable the test suite
on aarch64-linux.
 2017-03-28 09:34:38 +03:00
Marius Bakke 5ac097e28c
gnu: libpqxx: Fix build with newer sed. 
* gnu/packages/databases.scm (libpqxx)[arguments]: Add 'fix-sed-command' phase
that corrects a typo in the configure script.
 2017-03-26 09:16:04 +02:00
Marius Bakke 4b7e5c1131
Merge branch 'master' into core-updates 2017-03-15 17:52:26 +01:00
Marius Bakke bd102157a1
gnu: mariadb: Update to 10.1.22 [fixes CVE-2017-3302 and CVE-2017-3313]. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.22.
 2017-03-15 15:08:31 +01:00
Ludovic Courtès e90e0fad1b
Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
ng0 bdc11dc4c0
gnu: Add tokyocabinet. 
* gnu/packages/databases.scm (tokyocabinet): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-03-02 13:56:54 -05:00
Marius Bakke 04c88363da
gnu: leveldb: Update to 1.20. 
* gnu/packages/databases.scm (leveldb): Update to 1.20.
 2017-03-02 18:39:14 +01:00
Efraim Flashner 9a9d6d782c
gnu: bdb@5.3: Support aarch64. 
* gnu/packages/databases.scm (bdb@5.3)[arguments]: Copy arguments from
* bdb, add '--build' flag for aarch64.
 2017-02-25 20:39:05 +02:00
Marius Bakke b9fb6b8a24
gnu: rocksdb: Update to 5.1.4. 
* gnu/packages/databases.scm (rocksdb): Update to 5.1.4.
 2017-02-25 13:10:27 +01:00
Marius Bakke 630bc4fc07
gnu: rocksdb: Update to 5.1.3. 
* gnu/packages/databases.scm (rocksdb): Update to 5.1.3.
 2017-02-24 11:47:28 +01:00
Efraim Flashner d15432ca9e
Merge remote-tracking branch 'origin/master' into core-updates 2017-02-20 12:56:14 +02:00
Marius Bakke 8a68a35317
gnu: sqlite: Update to 3.17.0. 
* gnu/packages/databases.scm (sqlite): Update to 3.17.0.
 2017-02-13 20:16:45 +01:00
Leo Famulari 83f805be02
gnu: postgresql: Update to 9.5.6. 
* gnu/packages/databases.scm (postgresql): Update to 9.5.6.
 2017-02-12 13:42:03 -05:00
Danny Milosavljevic c6b6a74e77
gnu: python-pyodbc-c: Update to 3.1.4. 
* gnu/packages/databases.scm (python-pyodbc-c): Update to 3.1.4.
 2017-02-11 10:22:20 +01:00
Ludovic Courtès 768f0ac9dd
Merge branch 'master' into core-updates 2017-02-10 17:40:25 +01:00
Marius Bakke ba8b9f8de0
gnu: databases.scm: Use license: prefix. 
* gnu/packages/databases.scm (4store, gdbm, bdb, bdb-5.3, mysql, mariadb,
  postgresql, qdbm, rocksdb, sparql-query, sqlite, perl-dbi, redis,
  unixodbc, kyotocabinet, wiredtiger): Use license: prefix.
 2017-02-09 00:43:44 +01:00
Marius Bakke 06a035db42
gnu: databases.scm: Sort package imports. 
* gnu/packages/databases.scm (gnu): Sort module imports.
 2017-02-09 00:43:05 +01:00
Marius Bakke 77e52190fa
gnu: rocksdb: Update to 5.1.2. 
* gnu/packages/databases.scm (rocksdb): Update to 5.1.2.
[native-inputs]: Add WHICH.
 2017-02-09 00:40:35 +01:00
Danny Milosavljevic 98d403bb45
gnu: Add python-pyodbc-c. 
* gnu/packages/databases.scm (python-pyodbc-c, python2-pyodbc-c):
  New variables.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-02-07 13:34:38 -05:00
Marius Bakke a24fda8114
gnu: bdb: Correct license. 
* gnu/packages/databases.scm (bdb)[license]: Replace with up-to-date
information. Move previous contents to ...
(bdb-5.3)[license]: ... here.
 2017-02-06 17:33:58 +01:00
Leo Famulari e8c83d04e1
Merge branch 'master' into core-updates 2017-02-02 10:52:24 -05:00
Marius Bakke d3c6ad0ab5
gnu: Add rocksdb. 
* gnu/packages/databases.scm (rocksdb): New variable.
 2017-01-30 16:52:29 +01:00
Leo Famulari d123f2f991
Merge branch 'master' into core-updates 2017-01-25 12:42:39 -05:00
Thomas Danckaert 259a94e981
gnu: Add qdbm. 
* gnu/packages/databases.scm (qdbm): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-24 23:09:09 +01:00
humanitiesNerd 81e9582105
gnu: wiredtiger: Update to 2.9.1 
* gnu/packages/databases.scm (wiredtiger): Update to 2.9.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-24 15:23:50 -05:00
Ludovic Courtès 58ea4d407c
Merge branch 'master' into core-updates 2017-01-23 22:33:10 +01:00
Leo Famulari 10a8746968
gnu: mariadb: Update to 10.1.21 [security fixes]. 
Fixes CVE-2016-3238 and CVE-2017-{3238,3243,3244,3257,3258,3265,3291,3312,3317,
3318}.

* gnu/packages/databases.scm (mariadb): Update to 10.1.21.
 2017-01-19 21:24:25 -05:00
Marius Bakke b9f771a795
gnu: Add leveldb. 
* gnu/packages/databases.scm (leveldb): New variable.
 2017-01-18 21:23:23 +01:00
Marius Bakke e58db46bb8
gnu: sqlite: Update to 3.16.2. 
* gnu/packages/databases.scm (sqlite): Update to 3.16.2.
 2017-01-15 23:37:04 +01:00
Leo Famulari 74288230ea
Merge branch 'master' into core-updates 2017-01-06 17:14:41 -05:00
Alex Vong ed88dd4512
gnu: mariadb: Update to 10.1.20. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.20.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 14:51:04 -05:00
Alex Vong e63b19f509
gnu: mysql: Update to 5.7.17. 
* gnu/packages/databases.scm (mysql): Update to 5.7.17.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 14:45:23 -05:00
Marius Bakke 1d0ceb4775
gnu: sqlite: Update to 3.15.2. 
* gnu/packages/databases.scm (sqlite): Update to 3.15.2.
 2016-12-12 22:54:25 +01:00
Tobias Geerinckx-Rice 68a9d6df5e
gnu: perl-dbix-class-introspectablem2m: Update source tarball URL. 
* gnu/packages/perl.scm (perl-dbix-class-introspectablem2m)[source]: Update
tarball URL.
 2016-12-12 22:08:45 +01:00
Efraim Flashner 467d4c85c3
gnu: perl-dbd-sqlite: Update to 1.52. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.52.
 2016-11-30 21:26:44 +02:00
Efraim Flashner ebd2dbbfc1
gnu: perl-dbix-class-schema-loader: Update to 0.07046. 
* gnu/packages/databases.scm (perl-dbix-class-schema-loader):
Update to 0.07046.
 2016-11-30 21:26:43 +02:00
Efraim Flashner 7a462b8023
gnu: perl-dbix-class-introspectablem2m: Update to 0.001002. 
* gnu/packages/databases.scm (perl-dbix-class-introspectablem2m):
Update to 0.001002.
 2016-11-30 21:26:43 +02:00
Efraim Flashner 180cb81b4c
gnu: perl-dbix-class-cursor-cached: Update to 1.001004. 
* gnu/packages/databases.scm (perl-dbix-class-cursor-cached):
Update to 1.001004.
 2016-11-30 21:26:43 +02:00
Efraim Flashner 5d78d746af
gnu: perl-dbix-class: Update to 0.082840. 
* gnu/packages/databases.scm (perl-dbix-class): Update to 0.082840.
 2016-11-30 21:26:43 +02:00
Marius Bakke 7c635ed6f7
gnu: perl-dbd-mysql: Update to 4.041 [security fix]. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.041.
[source]: Update CPAN URI.
 2016-11-28 23:05:23 +01:00
Marius Bakke 3ad8cb4163
gnu: sqlite: Update to 3.15.1. 
* gnu/packages/databases.scm (sqlite): Update to 3.15.1.
[source]: Download from sqlite.org.
[home-page]: Use HTTPS.
(sqlite-3.15.1): Remove.
* gnu/packages/php.scm (php)[inputs]: Change 'sqlite-3.15.1' to 'sqlite'.
 2016-11-26 09:09:17 +01:00
Marius Bakke b28a33512f
gnu: Add sqlite-3.15.1. 
* gnu/packages/databases.scm (sqlite-3.15.1): New variable.
 2016-11-20 17:46:32 +01:00
Marius Bakke d3e5dc0a44
gnu: perl-dbd-mysql: Update to 4.039 [Fixes CVE-2016-1249]. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.039.
[source]: Update CPAN URI.
 2016-11-16 18:33:57 +00:00
Ludovic Courtès 2cab1dd58b
Merge branch 'core-updates' 2016-11-13 00:34:16 +01:00
Efraim Flashner d887f420d2
gnu: postgresql: Update to 9.5.5. 
* gnu/packages/databases.scm (postgresql): Update to 9.5.5.
[home-page]: Use https.
 2016-11-09 11:39:30 +02:00
Efraim Flashner bc332a638b
gnu: mariadb: Update to 10.1.19. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.19.
 2016-11-09 11:04:36 +02:00
Mark H Weaver d2478b4cdd
Merge branch 'master' into core-updates 2016-10-19 10:54:36 -04:00
Leo Famulari ca121ae8d7
gnu: mariadb: Update to 10.1.18. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.18.
 2016-10-18 21:32:11 -04:00
Leo Famulari 0cf3a7259b
gnu: mysql: Update to 5.7.16. 
* gnu/packages/databases.scm (mysql): Update to 5.7.16.
 2016-10-18 21:32:03 -04:00
Ludovic Courtès c21af659b4
gnu: recutils: Adjust to Bash 4.4. 
* gnu/packages/databases.scm (recutils)[arguments]: Add
'set-bash4.4-header-location' phase.
 2016-10-17 22:06:44 +02:00
Mark H Weaver abcf4858cd
Merge branch 'master' into core-updates 2016-10-12 09:28:14 -04:00
David Thompson b25f060fbd
gnu: redis: Update to 3.2.4. 
* gnu/packages/databases.scm (redis): Update to 3.2.4.
[arguments]: Add LDFLAGS to #:make-flags to work around missing linker
flag.
 2016-10-11 12:24:57 -04:00
Andy Patterson 62ea44fc89
gnu: Add sqlcipher. 
* gnu/packages/database.scm (sqlcipher): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-10-09 12:09:19 +03:00