0575fe681c
Revert "gnu: next: Compress the executable."
...
Some essential references (e.g. libfixposix) are lost in the process.
This reverts commit 0e8b91dbc4
2019-09-05 14:52:48 +02:00
6b4ed9ad97
gnu: gama: Update to 2.07.
...
* gnu/packages/gps.scm (gama): Update to 2.07.
2019-09-05 14:46:42 +03:00
79c6d8781b
gnu: bwa-meth: Capture one more reference to "bwa".
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Reported by: Alexander.Blume <Alexander.Blume@mdc-berlin.de>
* gnu/packages/bioinformatics.scm (bwa-meth)[arguments]: Capture invocation of
"bwa index" to retain reference to "bwa" package.
2019-09-05 12:06:43 +02:00
0e8b91dbc4
gnu: next: Compress the executable.
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* gnu/packages/web-browsers.scm (next)[arguments]: Compressing the executable
brings it from about 95 MiB to 22 MiB.
2019-09-05 11:55:58 +02:00
33a42f67ce
gnu: emacs-evil-collection: Update to 0.0.2.
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* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 0.0.2.
2019-09-05 11:55:58 +02:00
6b5f59c7a6
gnu: Add r-bigmelon.
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* gnu/packages/bioconductor.scm (r-bigmelon): New variable.
2019-09-05 11:46:29 +02:00
7d2cb646f7
gnu: Add r-gdsfmt.
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* gnu/packages/bioconductor.scm (r-gdsfmt): New variable.
2019-09-05 11:46:29 +02:00
38babeaaa4
gnu: Add r-watermelon.
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* gnu/packages/bioconductor.scm (r-watermelon): New variable.
2019-09-05 11:46:29 +02:00
46721deaf8
gnu: Add r-illuminahumanmethylation450kanno-ilmn12-hg19.
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* gnu/packages/bioconductor.scm
(r-illuminahumanmethylation450kanno-ilmn12-hg19): New variable.
2019-09-05 11:46:29 +02:00
db316d7376
gnu: Add r-roc.
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* gnu/packages/bioconductor.scm (r-roc): New variable.
2019-09-05 11:46:29 +02:00
7d57bc4d0d
gnu: efl: Update to 1.22.4.
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* gnu/packages/enlightenment.scm (efl): Update to 1.22.4.
2019-09-05 12:42:50 +03:00
a3439b0c70
gnu: sbcl: Use CLISP instead of unboostrappable CCL to build.
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* gnu/packages/lisp.scm (sbcl)[arguments]: Build with CLISP.
2019-09-05 11:41:35 +02:00
9e737b31cb
gnu: sbcl: Update to 1.5.6.
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* gnu/packages/lisp.scm (sbcl): Update to 1.5.6.
2019-09-05 10:25:02 +02:00
2b332c51db
gnu: dolphin-emu: Update to commit a974540.
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* gnu/packages/emulators.scm (dolphin-emu): Update to commit a974540.
[source]: Delete unneeded MoltenVK map.
[arguments]: Properly hardcode libvulkan path.
2019-09-05 08:22:34 +02:00
b8e7e20841
gnu: docker: Add support for tini.
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* gnu/packages/docker.scm (docker)[inputs]: Add tini.
[phases]{patch-paths}: Patch the path of the default init binary.
2019-09-05 09:38:23 +09:00
92086eeda3
gnu: Add tini.
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* gnu/packages/docker.scm (tini): New variable.
2019-09-05 09:38:22 +09:00
9bf589867b
gnu: nginx: Update to 1.17.3 [security fixes].
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This release fixes CVE-2019-9511, CVE-2019-9513, and CVE-2019-9516.
* gnu/packages/web.scm (nginx): Update to 1.17.3.
2019-09-05 00:21:43 +02:00
fbcbafdcaa
gnu: miniupnpc: Update to 2.1.20190824.
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* gnu/packages/upnp.scm (miniupnpc): Update to 2.1.20190824.
2019-09-05 00:21:43 +02:00
56ac8ca3c8
gnu: varnish: Update to 6.2.1.
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* gnu/packages/web.scm (varnish): Update to 6.2.1.
2019-09-05 00:21:43 +02:00
276e7739b9
gnu: libnl: Update to 3.5.0.
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* gnu/packages/linux.scm (libnl): Update to 3.5.0.
2019-09-05 00:21:43 +02:00
309721b324
gnu: samba: Update to 4.10.8 [fixes CVE-2019-10197].
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* gnu/packages/samba.scm (samba): Update to 4.10.8.
2019-09-05 00:21:42 +02:00
173cced751
gnu: tevent: Update to 0.10.1.
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* gnu/packages/samba.scm (tevent): Update to 0.10.1.
2019-09-05 00:21:42 +02:00
1068bdcfe8
gnu: talloc: Update to 2.3.0.
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* gnu/packages/samba.scm (talloc): Update to 2.3.0.
2019-09-05 00:21:42 +02:00
c0de48c9a5
gnu: tdb: Update to 1.4.2.
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* gnu/packages/databases.scm (tdb): Update to 1.4.2.
2019-09-05 00:21:42 +02:00
e25973e18f
gnu: libvisio: Update to 0.1.7.
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* gnu/packages/libreoffice.scm (libvisio): Update to 0.1.7.
2019-09-05 00:21:42 +02:00
558f4a30e2
gnu: libabw: Update to 0.1.3.
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* gnu/packages/libreoffice.scm (libabw): Update to 0.1.3.
[arguments]: Remove.
2019-09-05 00:21:41 +02:00
1a22a234df
gnu: LibRaw: Update to 1.19.5.
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* gnu/packages/photo.scm (libraw): Update to 0.19.5.
2019-09-05 00:21:41 +02:00
5ec7c4a153
gnu: php: Build against Oniguruma 6.
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* gnu/packages/php.scm (php)[inputs]: Change ONIGURUMA-5 to ONIGURUMA.
* gnu/packages/textutils.scm (oniguruma-5): Remove variable.
2019-09-05 00:21:41 +02:00
5ceac3f42b
gnu: oniguruma: Update to 6.9.3 [fixes CVE-2019-13224, CVE-2019-13225].
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* gnu/packages/textutils.scm (oniguruma): Update to 6.9.3.
2019-09-05 00:21:41 +02:00
35d4862260
gnu: libxfce4util: Build Vala bindings.
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* gnu/packages/xfce.scm (libxfce4util)[native-inputs]: Add vala.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-04 23:41:08 +02:00
cb8a5e075a
gnu: libxfce4util: Add gobject-introspection support.
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* gnu/packages/xfce.scm (libxfce4util): Add gobject-introspection to native-inputs.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-04 23:41:07 +02:00
b45e11dad8
gnu: Add xfce4-screensaver.
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* gnu/packages/xfce.scm (xfce4-screensaver): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-04 23:41:07 +02:00
d28b6dda86
gnu: Add xfce4-screenshooter.
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* gnu/packages/xfce.scm (xfce4-screenshooter): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-04 23:41:07 +02:00
8161c2d6ce
gnu: ghostscript: Keep the replacement private.
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This avoids having two matches for the "ghostscript" spec.
* gnu/packages/ghostscript.scm (ghostscript/fixed): Keep private.
2019-09-04 23:41:07 +02:00
ce502774b4
gnu: ocaml-easy-format: Update to 1.3.2.
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* gnu/packages/ocaml.scm (ocaml-easy-format): Update to 1.3.2.
2019-09-04 23:08:49 +02:00
e57dd20118
gnu: ocaml-frontc: Update to 3.4.2.
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* gnu/packages/ocaml.scm (ocaml-frontc): Update to 3.4.2.
2019-09-04 23:08:45 +02:00
4a8a0d8520
gnu: ocaml-ssl: Update to 0.5.9.
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* gnu/packages/ocaml.scm (ocaml-ssl): Update to 0.5.9.
2019-09-04 23:08:41 +02:00
5a3082eca8
gnu: opam: Update to 2.0.5.
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* gnu/packages/ocaml.scm (opam): Update to 2.0.5.
2019-09-04 23:08:38 +02:00
69c83817f8
gnu: ocaml-stringext: Update to 1.6.0.
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* gnu/packages/ocaml.scm (ocaml-stringext): Update to 1.6.0.
2019-09-04 23:08:34 +02:00
b3419c4027
gnu: ocaml-markup: Update to 0.8.1.
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* gnu/packages/ocaml.scm (ocaml-markup): Update to 0.8.1.
(ocaml-bisect-ppx): Use propagated-inputs instead of inputs.
2019-09-04 23:08:25 +02:00
72b2e2ea7a
gnu: ocaml-lwt-log: Update to 1.1.1.
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* gnu/packages/ocaml.scm (ocaml-lwt-log): Update to 1.1.1.
[source]: Use git-fetch.
2019-09-04 23:08:22 +02:00
8dfe8fee54
gnu: ocaml-biniou: Update to 1.2.1.
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* gnu/packages/ocaml.scm (ocaml-biniou): Update to 1.2.1.
2019-09-04 23:08:18 +02:00
11d73fb412
gnu: julia: Set search path.
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* gnu/packages/julia.scm (julia)[native-search-paths]: Add
specification for JULIA_LOAD_PATH.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-09-04 22:18:07 +02:00
4ab97ef18f
Revert "gnu: texinfo: Fix cross-compilation."
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This causes too many rebuilds for the master branch.
This reverts commit 210b6412ee
2019-09-04 19:18:10 +02:00
7c93edb93e
gnu: librepcb: Update to 0.1.2.
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* gnu/packages/engineering.scm (librepcb): Update to 0.1.2.
2019-09-04 22:03:51 +05:30
210b6412ee
gnu: texinfo: Fix cross-compilation.
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* gnu/packages/texinfo.scm (texinfo)[arguments]: Do not reset environment
before running configure with the native compiler, in a cross-compilation
context,
[inputs]: move perl from here ...
[native-inputs]: ... to here. Also add ncurses that is needed in a
cross-compilation context to build texinfo native tools.
2019-09-04 18:25:17 +02:00
6ef379f879
gnu: make-linux-libre: Fix cross-compilation.
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* gnu/packages/linux.scm (make-linux-libre)[arguments]: Unset CROSS_CPATH to
make sure that cross-libc is not found. Otherwise, some of its header would
conflict with the one from linux (stdint.h and linux/types.h).
2019-09-04 18:21:19 +02:00
6202bb33eb
gnu: linux-libre: Enable built-in ext4 support.
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When running qemu-img from (gnu system vm) with an aarch64 kernel, mounting
ext4 partitions fails because no modprobe of ext4 module is made. Like for
other kernel configs, provide built-in support for ext4 partitions.
* gnu/packages/aux-files/linux-libre/5.2-arm64.conf: Enable built-in ext4,
like in intel and armhf configs.
2019-09-04 18:17:45 +02:00
7c35342472
gnu: grub: Fix cross-compilation.
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* gnu/packages/bootloaders.scm (grub)[arguments]: Search for unifont in both
native-inputs and inputs.
2019-09-04 18:14:25 +02:00
58a75996ec
gnu: glibc-utf8-locales: Fix cross-compilation.
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* gnu/packages/base.scm (glibc-utf8-locales)[inputs]: Move to ...
[native-inputs]: ... here, in order to fix cross-compilation.
* gnu/packages/commencement.scm (glibc-utf8-locales-final)[inputs]: Move to ...
[native-inputs]: ... here, in order to fix cross-compilation.
2019-09-04 18:05:59 +02:00
e94b95473e
gnu: guile-wm: Fix cross-compilation.
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* gnu/packages/guile-wm.scm (guile-wm): Add guile and guile-xcb to native-inputs.
2019-09-04 18:01:49 +02:00
5ee1c0459e
gnu: ungoogled-chromium: Allow microphone access.
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Fixes <https://bugs.gnu.org/36961 >.
* gnu/packages/aux-files/chromium/master-preferences.json: Remove
"audio_capture_enabled" flag.
2019-09-04 13:17:39 +02:00
c959d99fd0
gnu: hdf4: Update to 4.2.14.
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* gnu/packages/maths.scm (hdf4): Update to 4.2.14.
2019-09-04 13:17:38 +02:00
beb0b947c1
gnu: kitty: Update to 0.14.4.
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* gnu/packages/terminals.scm (kitty): Update to 0.14.4.
2019-09-04 13:16:35 +02:00
f1371daa97
gnu: twinkle: update to 1.10.2.
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* gnu/packages/telephony.scm (twinkle): update to 1.10.2
* gnu/packages/patches/twinkle-include-qregexpvalidator.patch: Delete
it.
* gnu/local.mk (dist_patch_DATA): Remove patch.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-09-04 13:02:27 +02:00
1fe01b7011
gnu: ocaml-fileutils: Update to 0.6.0.
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* gnu/packages/ocaml.scm (ocaml-fileutils): Update to 0.6.0.
2019-09-03 23:32:38 +02:00
1a0d41b34d
gnu: ocaml-utop: Update to 2.4.1.
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* gnu/packages/ocaml.scm (ocaml-utop): Update to 2.4.1.
(ocaml-lamdba-term): Update to 2.0.2.
(ocaml-zed): Update to 2.0.3.
2019-09-03 23:32:34 +02:00
a21ea76fbf
gnu: Add ocaml-stdlib-shims.
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* gnu/packages/ocaml.scm (ocaml-stdlib-shims): New variable.
2019-09-03 23:32:30 +02:00
e60330510a
gnu: Add ocaml-charinfo-width.
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* gnu/packages/ocaml.scm (ocaml-charinfo-width): New variable.
2019-09-03 23:32:26 +02:00
a468fc5e8c
gnu: ocaml-camomile: Update to 1.0.2.
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* gnu/packages/ocaml.scm (ocaml-camomile): Update to 1.0.2.
[arguments]: Fix profile and disable failing tests.
2019-09-03 23:32:17 +02:00
3882f607e8
gnu: ocaml-zarith: Update to 1.9.1.
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* gnu/packages/ocaml.scm (ocaml-zarith): Update to 1.9.1.
2019-09-03 23:32:14 +02:00
d47c8fffd0
gnu: ocaml-result: Update to 1.4.
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* gnu/packages/ocaml.scm (ocaml-result): Update to 1.4.
2019-09-03 23:32:10 +02:00
5ab63bd583
gnu: ocaml-odoc: Update to 1.4.1.
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* gnu/packages/ocaml.scm (ocaml-odoc): Update to 1.4.1.
2019-09-03 23:32:05 +02:00
283ed30e1a
gnu: dune: Update to 1.11.3.
...
* gnu/packages/ocaml.scm (dune): Update to 1.11.3.
[source]: Use git-fetch.
2019-09-03 23:31:58 +02:00
ab68604e5f
gnu: ocaml-qcheck: Update to 0.10.
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* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.10.
2019-09-03 23:31:50 +02:00
8cc6a876bd
gnu: ocaml-migrate-parsetree: Update to 1.4.0.
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* gnu/packages/ocaml.scm (ocaml-migrate-parsetree): Update to 1.4.0.
(ocaml-ppx-tools-versioned): Update to 5.2.3.
[source]: Use git-fetch.
(ocaml-bisect-ppx): Fix compilation error.
2019-09-03 23:31:35 +02:00
f082c78c98
gnu: ocaml-cppo: Update to 1.6.6.
...
* gnu/packages/ocaml.scm (ocaml-cppo): Update to 1.6.6.
[source]: Use git-fetch.
2019-09-03 23:31:31 +02:00
242e9f0d2c
gnu: ocaml-batteries: Update to 2.10.0.
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* gnu/packages/ocaml.scm (ocaml-batteries): Update to 2.10.0.
2019-09-03 23:31:24 +02:00
948c700b90
gnu: Add emacs-pubmed.
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* gnu/packages/emacs-xyz.scm (emacs-pubmed): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-03 23:00:35 +03:00
d070a0884c
gnu: Add emacs-unidecode.
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* gnu/packages/emacs-xyz.scm (emacs-unidecode): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-03 23:00:35 +03:00
c9f8d6a953
gnu: Add emacs-org-tanglesync.
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* gnu/packages/emacs-xyz.scm (emacs-org-tanglesync): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-03 23:00:34 +03:00
8ac56556fe
gnu: emacs-org-pomodoro: Update to 2.1.0-1.aa07c11.
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* gnu/packages/emacs-xyz.scm (emacs-org-pomodoro): Update to 2.1.0-1.aa07c11.
[arguments]: Include "resources" directory and run tests.
[source]: Update url.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-03 23:00:34 +03:00
25bdbb618a
gnu: hdf-eos2: Add libtirpc input.
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* gnu/packages/maths.scm (hdf-eos2)[inputs]: Add LIBTIRPC.
2019-09-03 18:49:32 +02:00
1be4989d7c
gnu: next: Update to 1.3.1.
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* gnu/packages/web-browsers.scm (next-gtk-webkit): Update to 1.3.1.
[source]: Use GitHub.
(sbcl-next-download-manager)[arguments]: Fix asd-system-name.
(next)[inputs]: Remove unneeded dependencies.
2019-09-03 15:51:29 +02:00
bd3d71cb16
gnu: hdf4: Build with libtirpc.
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* gnu/packages/patches/hdf4-tirpc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (hdf4)[source](patches): Use it.
[inputs]: Add LIBTIRPC.
[arguments]: Adjust #:configure-flags accordingly.
2019-09-03 13:24:34 +02:00
6153fa0a99
gnu: guile-gi: Update to 0.2.0.
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* gnu/packages/guile-xyz.scm (guile-gi): Update to 0.2.0.
[arguments]: Remove make flags.
[native-inputs]: Add glib:bin.
2019-09-03 13:06:46 +02:00
f847b65943
gnu: r-wordcloud: Add r-tm to inputs.
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* gnu/packages/cran.scm (r-wordcloud)[propagated-inputs]: Add r-tm.
2019-09-03 12:46:01 +02:00
f785d54681
gnu: Add r-tm.
...
* gnu/packages/cran.scm (r-tm): New variable.
2019-09-03 12:46:01 +02:00
53bd3ab389
gnu: Add r-nlp.
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* gnu/packages/cran.scm (r-nlp): New variable.
2019-09-03 12:46:01 +02:00
be2309ec7b
gnu: rust-unicode-xid: Update to 0.2.0.
...
* gnu/packages/crates-io.scm (rust-unicode-xid): Update to 0.2.0.
(rust-unicode-xid-0.1): New variable.
(rust-proc-macro2)[arguments]: Specify rust-unicode-xid-0.1 in
cargo-inputs.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-09-03 11:23:01 +03:00
655ac50d3c
gnu: Add rust-constant-time-eq.
...
* gnu/packages/crates-io.scm (rust-constant-time-eq): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-09-03 11:23:01 +03:00
7b90155443
gnu: emacs-org-ql: Update to 0.2.
...
* gnu/packages/emacs-xyz.scm (emacs-org-ql): Update to 0.2.
[inputs]: Add emacs-ts and emacs-org.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-03 09:51:53 +03:00
0b95986aaf
gnu: emacs-org-sidebar: Update to 0.1-1.ed951d1.
...
* gnu/packages/emacs-xyz.scm (emacs-org-sidebar): Update to 0.1-1.ed951d1.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-03 09:51:53 +03:00
663bc5ded8
gnu: Add emacs-ts.
...
* gnu/packages/emacs-xyz.scm (emacs-ts): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-03 09:51:53 +03:00
6ec2450f1e
gnu: Add hoogle.
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* gnu/packages/haskell-apps.scm (hoogle): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:39 -04:00
5b0fdbba8a
gnu: Add ghc-js-flot.
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* gnu/packages/haskell-web.scm (ghc-js-flot): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:39 -04:00
621c077384
gnu: Add ghc-js-jquery.
...
* gnu/packages/haskell-web.scm (ghc-js-jquery): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:39 -04:00
21f5b9a9b9
gnu: Add ghc-process-extras.
...
* gnu/packages/haskell-xyz.scm (ghc-process-extras): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:39 -04:00
55f4c65336
gnu: Add ghc-storable-tuple.
...
* gnu/packages/haskell-xyz.scm (ghc-storable-tuple): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:38 -04:00
1307e4c73d
gnu: Add ghc-listlike.
...
* gnu/packages/haskell-xyz.scm (ghc-listlike): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:38 -04:00
ad80074ab0
gnu: Add ghc-storable-record.
...
* gnu/packages/haskell-xyz.scm (ghc-storable-record): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:38 -04:00
f169f713e4
gnu: Add ghc-fmlist.
...
* gnu/packages/haskell-xyz.scm (ghc-fmlist): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:38 -04:00
bc06ca4588
gnu: Add ghc-storablevector.
...
* gnu/packages/haskell-xyz.scm (ghc-storablevector): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:38 -04:00
7bbfa3926e
gnu: Add ghc-timeit.
...
* gnu/packages/haskell-xyz.scm (ghc-timeit): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:38 -04:00
6b652f5af3
gnu: Add ghc-non-negative.
...
* gnu/packages/haskell-xyz.scm (ghc-non-negative): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:37 -04:00
a52f4c5740
gnu: Add ghc-unsafe.
...
* gnu/packages/haskell-xyz.scm (ghc-unsafe): New variable.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-09-02 23:09:37 -04:00
68668e97dc
gnu: icecat: Update to 60.9.0-guix1.
...
* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.9.0-guix1.
(icecat-source)[upstream-firefox-source]: Update hash.
2019-09-02 21:02:48 -04:00
4a8253d622
gnu: grammalecte: Update to 1.3.0.
...
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.3.0.
2019-09-02 22:56:13 +02:00
cc650175a5
gnu: snap: Update to 5.1.0.
...
* gnu/packages/education.scm (snap): Update to 5.1.0.
2019-09-02 22:50:09 +02:00
d3a8dd2dc0
gnu: rclone: Update to 1.49.1.
...
* gnu/packages/sync.scm (rclone): Update to 1.49.1.
[source]: Update uri.
[arguments]: Update #:import-path.
2019-09-02 22:44:07 +02:00
b888396d70
gnu: gcl: Enable tests.
...
* gnu/packages/lisp.scm (gcl)[arguments]: Remove #:tests? flag and set the
#:test-target to "ansi-tests/test_results".
2019-09-02 13:46:06 -04:00
cc16f90a07
gnu: Add cl-hooks.
...
* gnu/packages/lisp.scm (cl-hooks, ecl-cl-hooks, sbcl-cl-hooks): New variables.
2019-09-02 17:09:28 +02:00
0b2396b6c6
gnu: sbcl-fiveam: Update to 1.4.1.
...
* gnu/packages/lisp.scm (sbcl-fiveam): Update to 1.4.1.
2019-09-02 17:09:28 +02:00
0403d01f01
gnu: Add net.didierverna.asdf-flv.
...
* gnu/packages/lisp.scm (cl-net.didierverna.asdf-flv,
ecl-net.didierverna.asdf-flv, sbcl-net.didierverna.asdf-flv): New variables.
2019-09-02 17:09:28 +02:00
eb98d5a83c
gnu: Add rust-heapsize-plugin, rust-language-tags.
...
* gnu/packages/crates-io.scm (rust-heapsize-plugin, rust-language-tags):
New variables.
2019-09-02 15:54:59 +03:00
7439498366
gnu: Add rust-heapsize-0.3.
...
* gnu/packages/crates-io.scm (rust-heapsize-0.3): New variable.
2019-09-02 15:54:59 +03:00
bb41995dc7
gnu: Add rust-owning-ref.
...
* gnu/packages/crates-io.scm (rust-owning-ref): New variable.
2019-09-02 15:54:59 +03:00
44b6397a58
gnu: Add rust-scoped-threadpool.
...
* gnu/packages/crates-io.scm (rust-scoped-threadpool): New variable.
2019-09-02 15:54:58 +03:00
76ee4446fd
gnu: Add rust-redox-syscall, rust-thread-id.
...
* gnu/packages/crates-io.scm (rust-redox-syscall, rust-thread-id): New
variables.
2019-09-02 15:54:58 +03:00
e107ccea84
gnu: r-ldblock: Update to 1.14.2.
...
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.14.2.
[propagated-inputs]: Remove r-erma; add r-ensdb-hsapiens-v75, r-ensembldb, and
r-httr.
2019-09-02 14:40:56 +02:00
b58b4410e2
gnu: r-mixomics: Update to 6.8.2.
...
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.8.2.
2019-09-02 14:40:56 +02:00
9b275285e9
gnu: r-fgsea: Update to 1.10.1.
...
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.10.1.
2019-09-02 14:40:56 +02:00
32fcd898f0
gnu: r-seurat: Update to 3.1.0.
...
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.0.
[propagated-inputs]: Add r-leiden, r-rcppannoy, and r-uwot.
2019-09-02 14:40:56 +02:00
91addfe05c
gnu: r-rtracklayer: Update to 1.44.3.
...
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.3.
2019-09-02 14:40:56 +02:00
2c7a32c2ac
gnu: r-biomart: Update to 2.40.4.
...
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.4.
2019-09-02 14:40:56 +02:00
e5bc6fce19
gnu: r-annotationdbi: Update to 1.46.1.
...
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.46.1.
2019-09-02 14:40:56 +02:00
aea33b475b
gnu: r-iranges: Update to 2.18.2.
...
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.2.
2019-09-02 14:40:56 +02:00
df0f876ee4
gnu: r-pbapply: Update to 1.4-2.
...
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-2.
2019-09-02 14:40:56 +02:00
21890aad50
gnu: r-rmarkdown: Update to 1.15.
...
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.15.
2019-09-02 14:40:56 +02:00
a1a7afc06c
gnu: r-hms: Update to 0.5.1.
...
* gnu/packages/statistics.scm (r-hms): Update to 0.5.1.
2019-09-02 14:40:56 +02:00
b21620bb47
gnu: r-whisker: Update to 0.4.
...
* gnu/packages/statistics.scm (r-whisker): Update to 0.4.
2019-09-02 14:40:56 +02:00
560f7c949a
gnu: r-chron: Update to 2.3-54.
...
* gnu/packages/statistics.scm (r-chron): Update to 2.3-54.
2019-09-02 14:40:56 +02:00
8e28535d0b
gnu: Add r-leiden.
...
* gnu/packages/cran.scm (r-leiden): New variable.
2019-09-02 14:40:56 +02:00
8bcd6c953a
gnu: r-umap: Update to 0.2.3.1.
...
* gnu/packages/cran.scm (r-umap): Update to 0.2.3.1.
[propagated-inputs]: Add r-openssl.
2019-09-02 14:40:56 +02:00
7a90573fd0
gnu: r-enrichr: Update to 2.1.
...
* gnu/packages/cran.scm (r-enrichr): Update to 2.1.
2019-09-02 14:40:56 +02:00
d64ac92f6c
gnu: r-dalex: Update to 0.4.7.
...
* gnu/packages/cran.scm (r-dalex): Update to 0.4.7.
2019-09-02 14:40:55 +02:00
466e68b4b2
gnu: r-ggforce: Update to 0.3.1.
...
* gnu/packages/cran.scm (r-ggforce): Update to 0.3.1.
2019-09-02 14:40:55 +02:00
e768b33936
gnu: r-bookdown: Update to 0.13.
...
* gnu/packages/cran.scm (r-bookdown): Update to 0.13.
2019-09-02 14:40:55 +02:00
87b4381584
gnu: r-tdthap: Update to 1.1-11.
...
* gnu/packages/cran.scm (r-tdthap): Update to 1.1-11.
2019-09-02 14:40:55 +02:00
dfe4c8c405
gnu: r-units: Update to 0.6-4.
...
* gnu/packages/cran.scm (r-units): Update to 0.6-4.
2019-09-02 14:40:55 +02:00
5feaa77591
gnu: r-wgaim: Update to 2.0-0.
...
* gnu/packages/cran.scm (r-wgaim): Update to 2.0-0.
[propagated-inputs]: Remove r-lattice; add r-ggplot2.
2019-09-02 14:40:55 +02:00
530404083a
gnu: r-apcluster: Update to 1.4.8.
...
* gnu/packages/cran.scm (r-apcluster): Update to 1.4.8.
2019-09-02 14:40:55 +02:00
553742fa98
gnu: r-lavaan: Update to 0.6-5.
...
* gnu/packages/cran.scm (r-lavaan): Update to 0.6-5.
2019-09-02 14:40:55 +02:00
e31eb738f7
gnu: r-ggextra: Update to 0.9.
...
* gnu/packages/cran.scm (r-ggextra): Update to 0.9.
[propagated-inputs]: Add r-r6.
2019-09-02 14:40:55 +02:00
6c81cc885d
gnu: r-fields: Update to 9.8-6.
...
* gnu/packages/cran.scm (r-fields): Update to 9.8-6.
2019-09-02 14:40:55 +02:00
4f1c668d31
gnu: r-rgl: Update to 0.100.30.
...
* gnu/packages/cran.scm (r-rgl): Update to 0.100.30.
2019-09-02 14:40:55 +02:00
0eb284350e
gnu: r-afex: Update to 0.25-1.
...
* gnu/packages/cran.scm (r-afex): Update to 0.25-1.
2019-09-02 14:40:55 +02:00
084ea3481b
gnu: r-summarytools: Update to 0.9.4.
...
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.4.
2019-09-02 14:40:55 +02:00
1656a4259b
gnu: r-coin: Update to 1.3-1.
...
* gnu/packages/cran.scm (r-coin): Update to 1.3-1.
2019-09-02 14:40:55 +02:00
a13f81dde7
gnu: r-libcoin: Update to 1.0-5.
...
* gnu/packages/cran.scm (r-libcoin): Update to 1.0-5.
2019-09-02 14:40:55 +02:00
9c2d978041
gnu: r-magick: Update to 2.2.
...
* gnu/packages/cran.scm (r-magick): Update to 2.2.
2019-09-02 14:40:55 +02:00
761f4764f9
gnu: r-raster: Update to 3.0-2.
...
* gnu/packages/cran.scm (r-raster): Update to 3.0-2.
2019-09-02 14:40:54 +02:00
59fd6915c8
gnu: r-zip: Update to 2.0.4.
...
* gnu/packages/cran.scm (r-zip): Update to 2.0.4.
2019-09-02 14:40:54 +02:00
2586cfd3d7
gnu: r-arules: Update to 1.6-4.
...
* gnu/packages/cran.scm (r-arules): Update to 1.6-4.
2019-09-02 14:40:54 +02:00
a71460135c
gnu: r-radiant-data: Update to 1.0.6.
...
* gnu/packages/cran.scm (r-radiant-data): Update to 1.0.6.
2019-09-02 14:40:54 +02:00
9ba8494c26
gnu: r-xfun: Update to 0.9.
...
* gnu/packages/cran.scm (r-xfun): Update to 0.9.
2019-09-02 14:40:54 +02:00
bd8710b413
gnu: r-seriation: Update to 1.2-8.
...
* gnu/packages/cran.scm (r-seriation): Update to 1.2-8.
2019-09-02 14:40:54 +02:00
fa859675cc
gnu: r-dtw: Update to 1.21-3.
...
* gnu/packages/cran.scm (r-dtw): Update to 1.21-3.
2019-09-02 14:40:54 +02:00
b4cf01ecc8
gnu: r-geometry: Update to 0.4.3.
...
* gnu/packages/cran.scm (r-geometry): Update to 0.4.3.
2019-09-02 14:40:54 +02:00
403e01e21e
gnu: r-circlize: Update to 0.4.7.
...
* gnu/packages/cran.scm (r-circlize): Update to 0.4.7.
2019-09-02 14:40:54 +02:00
Pierre Neidhardt