Commit Graph

14059 Commits

Author SHA1 Message Date
Ben Woodcroft 71461f88ee
gnu: mafft: Update to 7.305.
* gnu/packages/bioinformatics.scm (mafft): Update to 7.305.
[inputs]: Add ruby.
2016-08-16 19:49:15 +10:00
Efraim Flashner 9bb1826651
gnu: cmake: Update to 3.6.1.
* gnu/packages/cmake.scm (cmake): Update to 3.6.1.
2016-08-16 09:06:22 +03:00
Efraim Flashner fb0c4d1ac2
gnu: poppler: Use 'modify-phases'.
* gnu/packages/pdf.scm (poppler)[arguments]: Use 'modify-phases'.
2016-08-16 09:06:22 +03:00
Efraim Flashner 5f8fc5e3bd
gnu: poppler: Update to 0.46.0.
* gnu/packages/pdf.scm (poppler): Update to 0.46.0.
[home-page]: Use https.
2016-08-16 09:06:22 +03:00
Efraim Flashner 6c4742530a
gnu: cups-filters: Update to 1.10.0.
* gnu/packages/cups.scm (cups-filters): Update to 1.10.0.
[home-page]: Update it.
2016-08-16 09:06:21 +03:00
Efraim Flashner d2a79db4f7
gnu: cups: Update to 2.1.4.
* gnu/packages/cups.scm (cups): Update to 2.1.4.
[source]: Add Github fallback location.
[home-page]: Use https.
2016-08-16 09:06:21 +03:00
Efraim Flashner 3064d1763b
gnu: cups: Use 'modify-phases'.
* gnu/packages/cups.scm (cups)[arguments]: Use 'modify-phases'.
2016-08-16 09:06:20 +03:00
Efraim Flashner 8337cb210d
gnu: qpdf: Update to 6.0.0.
* gnu/packages/pdf.scm (qpdf): Update to 6.0.0.
2016-08-16 09:06:20 +03:00
Efraim Flashner 0adfe0ccbe
gnu: qpdf: Use 'modify-phases'.
* gnu/packages/pdf.scm (qpdf)[arguments]: Use 'modify-phases'.
2016-08-16 09:06:08 +03:00
Dmitry Bogatov f0f0a48b6a
gnu: Add sent.
* gnu/packages/suckless.scm (sent): New variable.

Co-authored-by: Leo Famulari <leo@famulari.name>
Co-authored-by: Eric Bavier <bavier@member.fsf.org>
2016-08-16 01:05:14 -05:00
Danny Milosavljevic 4d2470b0ef
gnu: avr: Use the correct gcc version as native-input.
* gnu/packages/avr.scm (avr-libc): Replace package by function.
* gnu/packages/avr.scm (avr-toolchain): Use new avr-libc function.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-15 14:48:21 -04:00
Al McElrath d23ce1ce2b
gnu: offlineimap: Update to 7.0.5.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.5.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-15 14:24:48 -04:00
ng0 cd372ca352
gnu: libextractor: Add more optional inputs.
* gnu/packages/gnunet.scm (libextractor)[inputs]: Add gtk+, libarchive,
libgsf, and libmpeg2.
[arguments]: New field.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-15 14:20:52 -04:00
ng0 5f9d590574
gnu: gnurl: Update to 7.50.1 [fixes CVE-2016-{5419,5420,5421].
* gnu/packages/gnunet.scm (gnurl): Update to 7.50.1.
[configure-flags]: Configure with --disable-smb.
Disable test1139.
[description]: Fix typo.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-15 13:52:48 -04:00
ng0 a1c83fef3c
gnu: Add proxychains-ng.
* gnu/packages/networking.scm (proxychains-ng): New variable.
2016-08-15 13:31:46 +02:00
Ben Woodcroft 0ed8f0cd4c
gnu: mafft: Update to 7.304.
* gnu/packages/bioinformatics.scm (mafft): Update to 7.304.
2016-08-15 20:59:41 +10:00
Ben Woodcroft 101e8f7171
gnu: mafft: Wrap programs.
* gnu/packages/bioinformatics.scm (mafft)[arguments]: Add 'wrap-programs'
phase.
[propagated-inputs]: Move coreutils from here ...
[inputs]: ... to here.
2016-08-15 20:51:00 +10:00
Ben Woodcroft 93b8316e08
gnu: mafft: Update to 7.300.
* gnu/packages/bioinformatics.scm (mafft): Update to 7.300.
2016-08-15 20:51:00 +10:00
Efraim Flashner 74a3c4bb6c
gnu: procps: Update to 3.3.12.
* gnu/packages/linux.scm (procps): Update to 3.3.12.
[source]: Remove patch.
* gnu/packages/patches/procps-non-linux.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-08-15 10:42:27 +03:00
Efraim Flashner da931eee60
gnu: file: Update to 5.28.
* gnu/packages/file.scm (file): Update to 5.28.
2016-08-15 10:42:27 +03:00
Efraim Flashner 8c8b2bf3a3
gnu: gcc@5: Update to 5.4.0.
* gnu/packages/gcc.scm (gcc@5): Update to 5.4.0.
2016-08-15 10:42:27 +03:00
Efraim Flashner b08474974f
gnu: gcc@4.9: Update to 4.9.4.
* gnu/packages/gcc.scm (gcc@4.9): Update to 4.9.4.
2016-08-15 10:42:26 +03:00
Efraim Flashner fba0d4c97a
gnu: gettext: Update to 0.19.8.1.
* gnu/packages/gettext.scm (gettext): Update to 0.19.8.1.
2016-08-15 10:42:09 +03:00
Efraim Flashner a7a92b02bf
gnu: diffutils: Update to 3.4.
* gnu/packages/base.scm (diffutils): Update to 3.4.
2016-08-15 10:42:08 +03:00
Efraim Flashner 4148ed4644
gnu: binutils: Update to 2.27.
* gnu/packages/base.scm (binutils): Update to 2.27.
2016-08-15 10:42:08 +03:00
Efraim Flashner 6cc83b68cb
gnu: gnu-make: Use 'modify-phases'.
* gnu/packages/base.scm (gnu-make)[arguments]: Use 'modify-phases'.
2016-08-15 10:42:08 +03:00
Efraim Flashner 6d2b94f225
gnu: gnu-make: Update to 4.2.1.
* gnu/packages/base.scm (gnu-make): Update to 4.2.1.
2016-08-15 10:42:04 +03:00
Leo Famulari 2328f328f3
gnu: imagemagick: Update to 6.9.5-7.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.5-7.
2016-08-15 01:50:16 -04:00
David Craven 8cce8797be
gnu: usbredir: Invoke autoreconf directly.
* gnu/packages/spice.scm (usbredir)[arguments]: Invoke autoreconf directly.
2016-08-15 02:24:11 +02:00
David Craven 273f1c05d8
gnu: usbredir: Add git commit to version.
* gnu/packages/spice.scm (usbredir)[version]: Add commit and revision to version
  string.
2016-08-15 02:24:10 +02:00
Leo Famulari d4db0612dc
gnu: dropbear: Update to 2016.74 [security fixes].
* gnu/packages/ssh.scm (dropbear): Update to 2016.74.
2016-08-14 16:19:11 -04:00
Leo Famulari 9372d2b8a5
gnu: gmp: Update to 6.1.1.
* gnu/packages/multiprecision.scm (gmp): Update to 6.1.1.
2016-08-14 15:44:01 -04:00
Leo Famulari 9715953080
gnu: gnutls: Update to 3.5.3.
* gnu/packages/tls.scm (gnutls): Update to 3.5.3.
2016-08-14 15:39:25 -04:00
Leo Famulari 2b11b9ab42
gnu: p11-kit: Update to 0.23.2.
* gnu/packages/tls.scm (p11-kit): Update to 0.23.2.
2016-08-14 15:36:09 -04:00
Leo Famulari 12433a216c
gnu: libtasn1: Update to 4.9.
* gnu/packages/tls.scm (libtasn1): Update to 4.9.
2016-08-14 15:32:10 -04:00
Leo Famulari 4f81d52720
gnu: libidn: Update to 1.33.
* gnu/packages/libidn.scm (libidn): Update to 1.33.
2016-08-14 15:26:10 -04:00
Leo Famulari 383434cc23
gnu: redis: Update to 3.2.3 [fixes CVE-2013-7458].
* gnu/packages/databases.scm (redis): Update to 3.2.3.
2016-08-14 13:54:02 -04:00
Ricardo Wurmus 1ebb9a27ab
gnu: fftw: Update to 3.3.5.
* gnu/packages/algebra.scm (fftw): Update to 3.3.5.
2016-08-14 19:06:03 +02:00
Marius Bakke c3ccba9238
gnu: Add fio.
* gnu/packages/benchmark.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-14 13:05:03 -04:00
Chris Marusich 5cf30103f7
gnu: Add sg3-utils.
* gnu/packages/scsi.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-14 12:45:44 -04:00
Ricardo Wurmus e04ae27bcf
gnu: openblas: Update to 0.2.18.
* gnu/packages/maths.scm (openblas): Update to 0.2.18.
2016-08-14 17:35:32 +02:00
Ricardo Wurmus 971ebdc89b
gnu: ardour: Add cppunit and readline to inputs.
* gnu/packages/audio.scm (ardour)[native-inputs]: Add cppunit.
[inputs]: Add readline.
2016-08-14 16:03:42 +02:00
Ricardo Wurmus a2529c584a
gnu: ardour: Update to 5.0.
* gnu/packages/audio.scm (ardour): Update to 5.0.
2016-08-14 16:03:42 +02:00
Ricardo Wurmus fcb416154f
gnu: lilv: Update to 0.22.0.
* gnu/packages/audio.scm (lilv): Update to 0.22.0.
2016-08-14 16:03:42 +02:00
Ricardo Wurmus c0549628b2
gnu: sord: Update to 0.14.0.
* gnu/packages/rdf.scm (sord): Update to 0.14.0.
2016-08-14 16:03:42 +02:00
Ricardo Wurmus 3c972f5388
gnu: serd: Update to 0.22.0.
* gnu/packages/rdf.scm (serd): Update to 0.22.0.
2016-08-14 16:03:42 +02:00
Mark H Weaver 5f4a446d37
services: guix: Fix activation when 'authorize-key?' is false.
* gnu/services/base.scm (guix-activation): Ensure that a gexp is
returned when 'authorize-key?' is false.
2016-08-14 02:48:51 -04:00
Ben Woodcroft a12ba6e878
gnu: Add bamm.
* gnu/packages/bioinformatics.scm (bamm): New variable.
2016-08-14 14:55:23 +10:00
Leo Famulari 891284e38e
nls: Update 'pl' translation. 2016-08-14 00:01:29 -04:00
Leo Famulari 29d9075727
gnu: gnupg-1: Use modify-phases syntax.
* gnu/packages/gnupg.scm (gnupg-1)[arguments]: Use modify-phases syntax.
2016-08-13 20:49:26 -04:00