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1906 Commits (0c85d2c62dd0d439ff87f243c0885e5b207bee85)

Author SHA1 Message Date
Christopher Baines 6465497fb9
gnu: Remove duplicated python-pafy. 
It was first added in 02f8f804f0, then again in
2dd12924cf.

* gnu/packages/python.scm (python-pafy): Remove duplicated package definition.
 2018-07-29 17:57:53 +01:00
Ricardo Wurmus ed2dfe3955
gnu: Add snakemake-4. 
* gnu/packages/python.scm (snakemake-4): New variable.
* gnu/packages/bioinformatics.scm (pigx-bsseq, pigx-rnaseq, pigx-scrnaseq,
pigx-chipseq)[inputs]: Use it.
 2018-07-27 15:30:38 +02:00
Ricardo Wurmus 269f100330
gnu: snakemake: Add missing dependencies. 
* gnu/packages/python.scm (snakemake)[propagated-inputs]: Add python-datrie,
python-docutils, python-jinja2, python-jsonschema, and python-networkx.
 2018-07-27 15:30:38 +02:00
Ricardo Wurmus 216a72a957
gnu: Add python-datrie. 
* gnu/packages/python.scm (python-datrie): New variable.
 2018-07-27 15:30:38 +02:00
Ricardo Wurmus b62715aa82
gnu: snakemake: Update to 5.2.0. 
* gnu/packages/python.scm (snakemake): Update to 5.2.0.
 2018-07-27 14:19:43 +02:00
Danny Milosavljevic a545090ce5
gnu: python-cairocffi: Fix loading of shared libraries. 
Fixes <https://bugs.gnu.org/32170>.

* gnu/packages/patches/python-cairocffi-dlopen-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-cairocffi)[inputs]: Add glib, gtk+, pango.
[native-inputs]: Add python-pytest.
[arguments]: Enable tests.
[arguments]<#:phases>[patch-paths]: New phase.
 2018-07-16 23:51:38 +02:00
Leo Famulari 8e632a6435
gnu: python-pyasn1-modules: Update to 0.2.2. 
* gnu/packages/python.scm (python-pyasn1-modules, python2-pyasn1-modules):
Update to 0.2.2.
 2018-07-16 16:47:55 -04:00
Leo Famulari 90f38fb661
gnu: python-pyasn1: Update to 0.4.3. 
* gnu/packages/python.scm (python-pyasn1, python2-pyasn1): Update to 0.4.3.
 2018-07-16 16:47:52 -04:00
Efraim Flashner 6c10675928
gnu: python-xenon: Update to 0.5.4. 
* gnu/packages/python.scm (python-xenon): Update to 0.5.4.
[arguments]: Remove part of custom 'patch-test-requirements phase.
 2018-07-14 23:19:42 +03:00
Ben Woodcroft 5908818e30
gnu: python-h5py: Update to 2.8.0. 
* gnu/packages/python.scm (python-h5py): Update to 2.8.0.
 2018-07-15 00:43:57 +10:00
Marius Bakke 49b6dc2b4e
Merge branch 'staging' 2018-07-13 00:25:45 +02:00
Marius Bakke 250276a202
gnu: python-pyyaml: Update to 3.13. 
* gnu/packages/python.scm (python-pyyaml): Update to 3.13.
 2018-07-12 17:21:15 +02:00
Marius Bakke 873325b030
Merge branch 'master' into staging 2018-07-08 23:58:22 +02:00
Nicolas Goaziou 2cde6e1de3
gnu: Add python-commandlines. 
* gnu/packages/python.scm (python-commandlines): New variable.
 2018-07-02 17:50:20 +02:00
Marius Bakke 92af3ce417
Merge branch 'master' into staging 2018-07-02 12:18:58 +02:00
Tobias Geerinckx-Rice 4df9c195f2
gnu: python-rst.linker: Update to 1.10. 
* gnu/packages/python.scm (python-rst.linker): Update to 1.10.
 2018-06-30 03:46:18 +02:00
Tobias Geerinckx-Rice e0e7ea7459
gnu: python-xopen: Update to 0.3.3. 
* gnu/packages/python.scm (python-xopen): Update to 0.3.3.
 2018-06-30 03:46:17 +02:00
Tobias Geerinckx-Rice af029a80dd
gnu: python2-xopen: Fix build. 
* gnu/packages/python.scm (python2-xopen)[propagated-inputs]: Add
python2-bz2file.
 2018-06-30 03:46:17 +02:00
Tobias Geerinckx-Rice d5ed14bdda
gnu: python-parso: Update to 0.2.1. 
* gnu/packages/python.scm (python-parso): Update to 0.2.1.
 2018-06-30 03:46:17 +02:00
Marius Bakke 9e9bc87eb8
gnu: python-pandas: Update to 0.23.1. 
* gnu/packages/python.scm (python-pandas): Update to 0.23.1.
[arguments]: Drop new S3 test.
[native-inputs]: Add PYTHON-BEAUTIFULSOUP4 and PYTHON-HTML5LIB.
 2018-06-28 22:03:31 +02:00
Marius Bakke 028fc15528
gnu: python-numpy: Update to 1.14.5. 
* gnu/packages/python.scm (python-numpy): Update to 1.14.5.
 2018-06-28 22:03:31 +02:00
Marius Bakke a167873c67
Merge branch 'master' into staging 2018-06-26 13:51:26 +02:00
Tobias Geerinckx-Rice 5666ca5edc
gnu: python-pathpy: Update to 11.0.1. 
* gnu/packages/python.scm (python-pathpy): Update to 11.0.1.
 2018-06-26 04:17:49 +02:00
Oleg Pykhalov 02e2d18297
gnu: Add python-send2trash. 
* gnu/packages/python.scm (python-send2trash, python2-send2trash): New public
variables.
 2018-06-23 19:49:11 +03:00
Marius Bakke 6969c4de44
Merge branch 'master' into staging 2018-06-18 15:29:38 +02:00
Leo Famulari 44d1b9569b
gnu: python-click-log: Update to 0.3.2. 
* gnu/packages/python.scm (python-click-log): Update to 0.3.2.
 2018-06-14 15:51:56 -04:00
Clément Lassieur 85d79a79e4
gnu: Add python-dns-lexicon. 
* gnu/packages/python.scm (python-dns-lexicon, python2-dns-lexicon): New
variables.
 2018-06-14 08:18:06 +02:00
Clément Lassieur b863b50d80
gnu: Add python-pynamecheap. 
* gnu/packages/python.scm (python-pynamecheap, python2-pynamecheap): New
variables.
 2018-06-14 08:18:02 +02:00
Clément Lassieur f4adbe7405
gnu: Add python-tldextract. 
* gnu/packages/python.scm (python-tldextract, python2-tldextract): New
variables.
 2018-06-14 08:17:59 +02:00
Clément Lassieur 0dc572380b
gnu: Add python-requests-file. 
* gnu/packages/python.scm (python-requests-file, python2-requests-file): New
variables.
 2018-06-14 08:17:55 +02:00
Leo Famulari bea07c7f55
gnu: python-llfuse: Update to 1.3.3. 
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.3.3.
 2018-06-12 15:30:30 -04:00
宋文武 feed5194b1
gnu: python-urwid, python2-urwid: Update to 2.0.1. 
* gnu/packages/python.scm (python-urwid, python2-urwird): Update to 2.0.1.
 2018-06-12 20:51:32 +08:00
Marius Bakke a032b4454b
Merge branch 'master' into staging 2018-06-11 23:52:15 +02:00
Ludovic Courtès b63f6c0192
gnu: python2: Deprecate "python@2". 
* gnu/packages/python.scm (python2-called-python): New variable.
 2018-06-11 18:23:24 +02:00
Oleg Pykhalov c0888cefdf
gnu: Add python-fasteners. 
* gnu/packages/python.scm (python-fasteners, python2-fasteners): New
variables.
 2018-06-08 16:25:44 +03:00
Ludovic Courtès a13c1bf4ca
Merge branch 'master' into core-updates 2018-06-01 23:41:40 +02:00
Konrad Hinsen ec8a9892d1
gnu: Add python-bigfloat. 
* gnu/packages/python.scm (python-bigfloat, python2-bigfloat): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-05-31 18:13:08 +02:00
Mark H Weaver 1640f16e78
Merge branch 'master' into core-updates 2018-05-27 01:26:09 -04:00
Fis Trivial e8f4d53e03
gnu: Add pybind11. 
* gnu/packages/python.scm (pybind11): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-05-26 22:24:23 +02:00
Mathieu Othacehe 4806d390cb
gnu: Add python2-gdrivefs. 
* gnu/packages/python.scm (python2-gdrivefs): New variable.
 2018-05-25 10:36:43 +02:00
Mathieu Othacehe a037a59f83
gnu: Add python-fusepy. 
* gnu/packages/python.scm (python-fusepy): New variable,
(python2-fusepy): new variable.
 2018-05-25 10:36:43 +02:00
Mathieu Othacehe b5a9f49b49
gnu: Add python-gipc. 
* gnu/packages/python.scm (python-gipc): New variable,
(python2-gipc): new variable.
 2018-05-25 10:36:43 +02:00
Mark H Weaver 0661758e13
Merge branch 'master' into core-updates 2018-05-21 13:22:32 -04:00
Fis Trivial 1900fa792f
gnu: Add python-glob2. 
* gnu/packages/python.scm (python-glob2, python2-glob2): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-05-20 23:20:37 +02:00
Rouby Pierre-Antoine 17b59aa019
gnu: jupyter: Add search path. 
* gnu/package/python.scm (jupyter)[native-search-paths]: Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-05-17 13:14:42 +02:00
Mark H Weaver 539bf8f2c0
Merge branch 'master' into core-updates 2018-05-17 01:00:50 -04:00
Tobias Geerinckx-Rice 2ef651a6e2
gnu: python-ddt: Update to 1.1.3. 
* gnu/packages/python.scm (python-ddt): Update to 1.1.3.
 2018-05-17 01:17:15 +02:00
Tobias Geerinckx-Rice 3aa5b7d934
gnu: python-netifaces: Update to 0.10.7. 
* gnu/packages/python.scm (python-netifaces): Update to 0.10.7.
 2018-05-17 01:17:03 +02:00
Tobias Geerinckx-Rice 34c2bc56f8
gnu: python-numexpr: Update to 2.6.5. 
* gnu/packages/python.scm (python-numexpr): Update to 2.6.5.
 2018-05-17 01:02:00 +02:00
Nicolas Goaziou 2eccb41493
gnu: Add python-yarl. 
* gnu/packages/python-web.scm (python-yarl): New variable.
 2018-05-11 11:54:41 +02:00