da90f337b3
gnu: Update python-django-filter to 1.1.0.
...
* gnu/packages/django.scm (python-django-filter)[version]: Update from 0.14.0
to 1.1.0.
[source]: Update sha256 hash.
[native-inputs]: Add python-djangorestframework and
python-django-crispy-forms as native inputs, as they are used in the test
suite.
2018-03-09 18:18:48 +00:00
cc534f0c71
gnu: Add python-django-crispy-forms.
...
* gnu/packages/django.scm (python-django-crispy-forms): New variable.
2018-03-09 18:18:48 +00:00
d5f56e9089
gnu: Add python-djangorestframework.
...
* gnu/packages/django.scm (python-djangorestframework): New variable.
2018-03-09 18:18:44 +00:00
a9079b4880
tests: mail: Add test for dovecot.
...
* gnu/tests/mail.scm (%dovecot-os, %test-dovecot): New variables.
(run-dovecot-test): New procedure.
2018-03-09 17:24:45 +03:00
6310dff1dc
services: dovecot: Copy dovecot.conf to /etc/dovecot.
...
Many Dovecot utilities compiled with assumption of ‘/etc/dovecot/dovecot.conf’
existence.
* gnu/services/mail.scm (dovecot-shepherd-service): Move config generation.
Invoke ‘dovecot’ without ‘-c’ flag.
(%dovecot-activation): Copy ‘dovecot.conf’ to ‘/etc/dovecot’.
(dovecot-service-type): Make ‘%dovecot-activation’ non-constant.
2018-03-09 17:02:31 +03:00
a539ad867d
gnu: r-rhdf5lib: Make build reproducible.
...
* gnu/packages/bioinformatics.scm (r-rhdf5lib)[arguments]: Remove timestamp
and host system kernel version.
2018-03-09 11:40:59 +01:00
d8f46d5234
gnu: hdf5: Do not record the build-time kernel version.
...
* gnu/packages/maths.scm (hdf5)[arguments]: Patch libhdf5.settings to prevent
the kernel version on the build node from affecting the output.
2018-03-09 11:20:22 +01:00
1b5905fe68
gnu: r-fnn: Remove duplicate definition.
...
* gnu/packages/cran.scm (r-fnn)[home-page]: Use HTTPS.
* gnu/packages/statistics.scm (r-fnn): Remove.
2018-03-08 23:38:41 +01:00
22a0c65969
gnu: Add r-phangorn.
...
* gnu/packages/bioinformatics.scm (r-phangorn): New variable.
2018-03-08 23:31:56 +01:00
be815dbdda
gnu: Add r-smoother.
...
* gnu/packages/cran.scm (r-smoother): New variable.
2018-03-08 23:31:56 +01:00
d10b0952ce
gnu: Add r-fnn.
...
* gnu/packages/cran.scm (r-fnn): New variable.
2018-03-08 23:31:56 +01:00
661bb51e66
gnu: Add r-vim.
...
* gnu/packages/cran.scm (r-vim): New variable.
2018-03-08 23:31:56 +01:00
fc784b6672
gnu: Add r-prroc.
...
* gnu/packages/cran.scm (r-prroc): New variable.
2018-03-08 23:31:56 +01:00
94e46cabc1
gnu: Add r-abind.
...
* gnu/packages/cran.scm (r-abind): New variable.
2018-03-08 23:31:56 +01:00
3a563a410a
gnu: Add r-sqldf.
...
* gnu/packages/cran.scm (r-sqldf): New variable.
2018-03-08 23:31:56 +01:00
3dab50d92a
gnu: Add r-gsubfn.
...
* gnu/packages/cran.scm (r-gsubfn): New variable.
2018-03-08 23:31:56 +01:00
db80dd4a1d
gnu: Add r-psych.
...
* gnu/packages/cran.scm (r-psych): New variable.
2018-03-08 23:31:56 +01:00
35b0c051c5
gnu: Add r-signal.
...
* gnu/packages/cran.scm (r-signal): New variable.
2018-03-08 23:31:55 +01:00
53cc59a1d8
gnu: r-ape: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-ape): Move from here...
* gnu/packages/cran.scm (r-ape): ...to here.
2018-03-08 23:31:55 +01:00
b7ce825c85
gnu: r-sfsmisc: Update to 1.1-2.
...
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-2.
2018-03-08 23:31:55 +01:00
69c38faa91
gnu: r-nmf: Update to 0.21.0.
...
* gnu/packages/statistics.scm (r-nmf): Update to 0.21.0.
2018-03-08 23:31:55 +01:00
1b17fdbe41
gnu: r-openssl: Update to 1.0.1.
...
* gnu/packages/statistics.scm (r-openssl): Update to 1.0.1.
2018-03-08 23:31:55 +01:00
bbf8540d43
gnu: python-sympy, python2-sympy: Only run core tests.
...
* gnu/packages/python.scm (python-sympy, python2-sympy)[arguments]: Move tests
after installation; run only core tests.
2018-03-08 23:14:10 +01:00
fee7f8a94e
gnu: nano: Update to 2.9.4.
...
* gnu/packages/nano.scm (nano): Update to 2.9.4.
2018-03-08 20:29:20 +02:00
84c195e505
gnu: r-dropbead: Update to 0-2.d746c6f.
...
* gnu/packages/bioinformatics.scm (r-dropbead): Update to 0-2.d746c6f.
2018-03-08 18:53:49 +01:00
7f2f834550
gnu: milkytracker: Actually link with the JACK library.
...
* gnu/packages/music.scm (milkytracker)[arguments]: Add appropriate configure
flag.
2018-03-08 10:09:29 -05:00
3e25d2b22e
gnu: python-msgpack-transitional: Use a distinct name.
...
* gnu/packages/python.scm (python-msgpack-transitional)[name]: New field.
2018-03-08 13:23:22 +01:00
875fe4b6b6
gnu: nghttp2: Use a fixed variant of tzdata for tests.
...
* gnu/packages/web.scm (nghttp2)[native-inputs]: Replace TZDATA with TZDATA-FOR-TESTS.
2018-03-08 13:23:22 +01:00
c32e3ddedd
services: agetty: Call default-serial-port only when starting.
...
* gnu/services/base.scm (agetty-shepherd-service): Call default-serial-port
only when starting.
2018-03-08 13:16:30 +01:00
770986d541
gnu: feh: Update to 2.25.1.
...
* gnu/packages/image-viewers.scm (feh): Update to 2.25.1.
2018-03-08 12:25:05 +01:00
dffc5ab5e4
vm: Use 9p mount tags below 32 chars.
...
Fixes <https://bugs.gnu.org/30667 >.
Reported by Björn Höfling <bjoern.hoefling@bjoernhoefling.de>.
* gnu/system/vm.scm (file-system->mount-tag): Use 'sha1' to compute the
tag.
2018-03-08 11:56:20 +01:00
3aab885144
gnu: guile: Add 2.2.2.
...
* gnu/packages/guile.scm (guile-2.2.2): New variable.
2018-03-08 11:56:20 +01:00
ca1499ce20
gnu: intelmetool, me-cleaner: Restrict to Intel platforms.
...
* gnu/packages/flashing-tools.scm (intelmetool)[supported-systems]: New
field.
(me-cleaner)[supported-systems]: New field.
2018-03-08 11:56:20 +01:00
338e2852b5
gnu: python-ddt: Update to 1.1.2.
...
* gnu/packages/python.scm (python-ddt): Update to 1.1.2.
2018-03-08 09:07:30 +01:00
ef20a6f0b4
gnu: python-ddt: Mark up description.
...
* gnu/packages/python.scm (python-ddt)[description]: Use @dfn.
2018-03-08 09:07:30 +01:00
3d63422c92
gnu: yapet: Update to 1.1.
...
* gnu/packages/password-utils.scm (yapet): Update to 1.1.
2018-03-08 09:07:29 +01:00
f95e9a6bca
gnu: keepassxc: Update to 2.3.1.
...
* gnu/packages/password-utils.scm (keepassxc): Update to 2.3.1.
2018-03-08 09:07:29 +01:00
6e076b3d50
gnu: slurm: Update to 17.11.3.
...
* gnu/packages/parallel.scm (slurm): Update to 17.11.3.
2018-03-08 09:07:28 +01:00
254a88199f
gnu: global: Replace GLOBAL with GNU GLOBAL in description.
...
* gnu/packages/code.scm (global)[description]: Replace GLOBAL with GNU GLOBAL.
2018-03-08 09:01:12 +01:00
a89bf3318f
gnu: vulkan-icd-loader: Update to 1.1.70.0.
...
* gnu/packages/vulkan.scm (vulkan-icd-loader): Update to 1.1.70.0.
2018-03-08 08:53:19 +01:00
e2d0cf033e
gnu: sunxi-tools: Add cross-libc's "static" output.
...
* gnu/packages/admin.scm (sunxi-tools)[native-inputs]: Add cross-libc's
"static" output.
2018-03-08 01:41:22 +01:00
e7988175d9
gnu: sunxi-tools: Improve build error reporting.
...
* gnu/packages/admin.scm (sunxi-tools)[arguments]<#:phases>[set-environment-up]:
Improve build error reporting.
2018-03-08 01:41:20 +01:00
f43857d65d
gnu: emacs-slack: Update to 0-3.9272460.
...
* gnu/packages/emacs.scm (emacs-slack): Update to 0-3.9272460.
2018-03-08 01:24:02 +01:00
0bdd5b8ab7
gnu: Add pigx-rnaseq.
...
* gnu/packages/bioinformatics.scm (pigx-rnaseq): New variable.
2018-03-07 23:25:36 +01:00
e2cafc2449
gnu: Add r-algdesign.
...
* gnu/packages/cran.scm (r-algdesign): New variable.
2018-03-07 22:43:38 +01:00
f64fea1d2c
gnu: Add r-radiant-data.
...
* gnu/packages/cran.scm (r-radiant-data): New variable.
2018-03-07 22:18:38 +01:00
5d9b82acfc
gnu: Add r-shinyace.
...
* gnu/packages/cran.scm (r-shinyace): New variable.
2018-03-07 22:18:38 +01:00
a00968b7a8
gnu: Add r-import.
...
* gnu/packages/cran.scm (r-import): New variable.
2018-03-07 22:18:38 +01:00
b2dc4cb41c
gnu: Add r-cgdsr.
...
* gnu/packages/cran.scm (r-cgdsr): New variable.
2018-03-07 22:18:38 +01:00
12ff7f3fc7
gnu: glibc: Add a comment in the patch.
...
* gnu/packages/patches/glibc-allow-kernel-2.6.32.patch: Add a comment.
2018-03-07 21:39:32 +01:00
036ed3a830
gnu: glibc-2.26-patch: Remove unneeded 'replacement' field.
...
* gnu/packages/base.scm (glibc-2.26-patched): Remove unneeded
'replacement' field.
2018-03-07 21:39:32 +01:00
7c788ed227
gnu: commencement: 'glibc-final' inherits the replacement of 'glibc'.
...
That was the intent of commit b672a81607https://lists.gnu.org/archive/html/guix-devel/2018-02/msg00435.html >.
* gnu/packages/commencement.scm (glibc-final): Use 'package/inherit' so
that we inherit the 'replacement' of GLIBC.
2018-03-07 21:39:32 +01:00
0fccb24765
gnu: commencement: 'glibc-final' now inherits from 'glibc'.
...
* gnu/packages/commencement.scm (glibc-final): Inherit from GLIBC
instead of GLIBC-FINAL-WITH-BOOTSTRAP-BASH.
[propagated-inputs]: New fields.
2018-03-07 21:39:32 +01:00
021caafa2c
gnu: Add r-heatmaply.
...
* gnu/packages/cran.scm (r-heatmaply): New variable.
2018-03-07 18:12:42 +01:00
f35843674e
gnu: znc: Update to 1.6.6.
...
* gnu/packages/messaging.scm (znc): Update to 1.6.6.
2018-03-07 15:37:14 +01:00
7f1773eaee
gnu: Use HTTPS for zlib.net home pages.
...
* gnu/packages/compression.scm (zlib, pigz)[home-page]: Use HTTPS.
2018-03-07 15:37:14 +01:00
9dae73c31c
gnu: pigz: Update to 2.4.
...
* gnu/packages/compression.scm (pigz): Update to 2.4.
2018-03-07 15:37:13 +01:00
6c4da3b76a
gnu: meson: Mark up description.
...
* gnu/packages/build-tools.scm (meson)[description]: Use @dfn.
2018-03-07 15:37:13 +01:00
b8b34be61c
gnu: links, lynx, qutebrowser: Update phase style.
...
* gnu/packages/web-browsers.scm (links, lynx, qutebrowser)[arguments]:
Substitute INVOKE for SYSTEM and end phases with #t.
2018-03-07 15:37:13 +01:00
b9499508b4
gnu: keyutils: Update to 1.5.10.
...
* gnu/packages/crypto.scm (keyutils): Update to 1.5.10.
2018-03-07 15:37:13 +01:00
925102bb98
gnu: cppcheck: Update to 1.82.
...
* gnu/packages/check.scm (cppcheck): Update to 1.82.
2018-03-07 15:37:13 +01:00
d4f5e68e55
gnu: cmdtest: Update to 0.32.
...
* gnu/packages/check.scm (cmdtest): Update to 0.32.
2018-03-07 15:37:12 +01:00
45298300e4
gnu: pam-krb5: Mark up description.
...
* gnu/packages/admin.scm (pam-krb5)[description]: Use @code.
2018-03-07 15:37:12 +01:00
0e6c242bb7
gnu: pam-krb5: Update to 4.8.
...
* gnu/packages/admin.scm (pam-krb5): Update to 4.8.
2018-03-07 15:37:12 +01:00
c3d828855a
gnu: mg: Use HTTPS home page.
...
* gnu/packages/text-editors.scm (mg)[home-page]: Use HTTPS.
2018-03-07 15:37:11 +01:00
b11481a542
gnu: mg: Update to 20171014.
...
* gnu/packages/text-editors.scm (mg): Update to 20171014.
2018-03-07 15:37:11 +01:00
7649e4269e
gnu: c-reduce: Use HTTPS home page.
...
* gnu/packages/debug.scm (c-reduce)[home-page]: Use HTTPS.
2018-03-07 15:37:11 +01:00
2b30af9541
gnu: c-reduce: Update to 2.6.0.
...
* gnu/packages/debug.scm (c-reduce): Update to 2.6.0.
2018-03-07 15:37:11 +01:00
30e43e816b
gnu: python2-gobject@2: Update to 2.28.7
...
* gnu/packages/glib.scm (python2-gobject-2): Update to 2.28.7.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-07 14:57:10 +01:00
eaa8292e41
gnu: Add python-pycurl.
...
* gnu/packages/python-web.scm (python-pycurl, python2-pycurl): New
variables.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-03-07 14:57:10 +01:00
9dda6dadf1
gnu: xdriinfo: Update to 1.0.6.
...
* gnu/packages/xorg.scm (xdriinfo): Update to 1.0.6.
2018-03-07 14:53:25 +01:00
b5ebc1bf8c
gnu: twm: Update to 1.0.10.
...
* gnu/packages/xorg.scm (twm): Update to 1.0.10.
[source]: Use bzip-compressed tarball.
2018-03-07 14:53:25 +01:00
5668a365d6
gnu: mkfontscale: Update to 1.1.3.
...
* gnu/packages/xorg.scm (mkfontscale): Update to 1.1.3.
2018-03-07 14:53:24 +01:00
0cf985d615
gnu: imagemagick: Update to 6.9.9-37.
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-37.
2018-03-07 14:53:24 +01:00
e07a44891c
gnu: Add gtksourceviewmm.
...
* gnu/packages/gtk.scm (gtksourceviewmm): New public variable.
2018-03-07 14:53:24 +01:00
8e933cb36a
gnu: Use HTTPS on gtkmm.org home pages.
...
* gnu/packages/gtk.scm (atkmm, gtkmm)[home-page]: Use HTTPS.
* gnu/packages/gnome.scm (libgnomecanvasmm)[home-page]: Likewise.
* gnu/packages/glib.scm (glibmm)[home-page]: Likewise.
2018-03-07 14:53:24 +01:00
6a49ae7864
gnu: gtkmm: Use the for-test xorg variant for tests.
...
* gnu/packages/gtk.scm (gtkmm)[native-inputs]: Replace XORG-SERVER with
XORG-SERVER-1.19.3.
[arguments]: Add #:disallowed-references.
2018-03-07 14:53:24 +01:00
29c7b4d638
gnu: gtkmm: Update to 3.22.2.
...
* gnu/packages/gtk.scm (gtkmm): Update to 3.22.2.
[arguments]: Set #:configure-flags.
2018-03-07 14:53:24 +01:00
7700c6ca20
gnu: glibmm: Update to 2.54.1.
...
* gnu/packages/glib.scm (glibmm): Update to 2.54.1.
[arguments]: Add #:configure-flags.
2018-03-07 14:53:23 +01:00
06c15ee585
gnu: Add r-colorout.
...
* gnu/packages/statistics.scm (r-colorout): New public variable.
2018-03-07 16:38:26 +03:00
63d9900296
gnu: youtube-viewer: Add '$out/lib/perl5/site_perl/' to search path.
...
Fixes <https://bugs.gnu.org/30671 >.
Reported by Ricardo Wurmus <rekado@elephly.net>.
* gnu/packages/video.scm (youtube-viewer)[arguments]: In 'wrap-program'
phase, add '$out/lib/perl5/site_perl/' to search path.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-07 11:22:42 +01:00
270750d440
gnu: Add IBM Plex font.
...
* gnu/packages/fonts.scm (font-ibm-plex): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-03-07 11:22:42 +01:00
abfbdafd0e
linux-initrd: Add a hint for the missing module error.
...
* gnu/system/linux-initrd.scm (check-device-initrd-modules): Add a
'&fix-hint'.
2018-03-07 11:22:42 +01:00
ca23693d28
linux-initrd: Factorize 'check-device-initrd-modules'.
...
* gnu/system/mapped-devices.scm (check-device-initrd-modules): Move to...
* gnu/system/linux-initrd.scm (check-device-initrd-modules): ... here.
New procedure.
* po/guix/POTFILES.in: Add it.
* guix/scripts/system.scm (check-initrd-modules)[check-device]: Remove.
Use 'check-device-initrd-modules' instead.
2018-03-07 11:22:42 +01:00
6c4458172d
services: file-systems: Include 'user-file-systems' service.
...
Previously the KNOWN-FS value used in 'essential-services' would be
incomplete: it would lack all the file systems provided by services that
extend 'file-system-service-type' (/sys/fs/cgroup,
/proc/sys/fs/binfmt_misc, etc.) Consequently, upon shutdown,
'user-processes' would unmount these file systems before their
corresponding service had been stopped; when their corresponding (e.g.,
'file-system-/proc/sys/fs/binfmt_misc') was stopped, its 'umount' call
would fail.
This was harmless in practice, but this patch makes sure things work as
intended and file systems are unmounted in the right order.
* gnu/services/base.scm (file-system-shepherd-services): Instantiate
'user-file-systems' Shepherd service from here.
(user-unmount-service-type, user-unmount-service): Remove.
* gnu/system.scm (essential-services): Remove call to 'user-unmount-service'.
* gnu/system/install.scm (cow-store-service-type): Adjust comment.
2018-03-07 11:22:42 +01:00
366ddc1ac5
services: dicod: Depend on 'user-processes'.
...
* gnu/services/dict.scm (dicod-shepherd-service): Add 'requirement'.
2018-03-07 11:22:41 +01:00
2468ca0488
gnu: thefuck: Update to 3.25.
...
* gnu/packages/admin.scm (thefuck): Update to 3.25
[inputs]: Add python-pyte.
[native-inputs]: Remove python-setuptools.
* gnu/packages/patches/thefuck-test-environ.patch: Adjust to latest source.
2018-03-06 23:33:57 -06:00
f70666c9ce
gnu: Add maven-resolver-connector-basic.
...
* gnu/packages/maven.scm (maven-resolver-connector-basic): New variable.
2018-03-06 23:06:19 +01:00
bca6cf54f4
gnu: Add maven-resolver-util.
...
gnu/packages/maven.scm (maven-resolver-util): New variable.
2018-03-06 23:06:15 +01:00
360537838e
gnu: Add maven-resolver-test-util.
...
* gnu/packages/maven.scm (maven-resolver-test-util): New variable.
2018-03-06 23:06:12 +01:00
d85cb53924
gnu: Add maven-resolver-spi.
...
* gnu/packages/maven.scm (maven-resolver-spi): New variable.
2018-03-06 23:05:51 +01:00
41125eaff8
gnu: Add maven-resolver-api.
...
* gnu/packages/maven.scm: New file.
(maven-resolver-api): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-06 23:05:34 +01:00
8a325748fb
gnu: isc-dhcp: Update to 4.3.6-P1 [fixes CVE-2018-{5732,5733}].
...
* gnu/packages/admin.scm (isc-dhcp): Update to 4.3.6-P1.
2018-03-06 13:34:20 -05:00
3b5262865c
gnu: syncthing: Update to 0.14.45.
...
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.45.
[inputs]: Remove go-github-com-xtaci-kcp-go,
go-github-com-ccding-go-stun, and go-github-com-xtaci-smux. Add
go-github-com-pkg-errors.
2018-03-06 13:24:20 -05:00
01794ffce0
gnu: Remove go-github-com-templexxx-xor.
...
* gnu/packages/syncthing.scm (go-github-com-templexxx-xor): Remove variable.
2018-03-06 13:24:20 -05:00
6482d30472
gnu: Remove go-github-com-templexxx-cpufeat.
...
* gnu/packages/syncthing.scm (go-github-com-templexxx-cpufeat): Remove
variable.
2018-03-06 13:24:20 -05:00
7d02ae4b85
gnu: Remove go-github-com-tjfoc-gmsm-sm4.
...
* gnu/packages/syncthing.scm (go-github-com-tjfoc-gmsm-sm4): Remove variable.
2018-03-06 13:24:19 -05:00
7915ef0bff
gnu: Remove go-github-com-klauspost-reedsolomon.
...
* gnu/packages/syncthing.scm (go-github-com-klauspost-reedsolomon): Remove
variable.
2018-03-06 13:24:19 -05:00
abb8973544
gnu: Remove go-github-com-klauspost-cpuid.
...
* gnu/packages/syncthing.scm (go-github-com-klauspost-cpuid): Remove variable.
2018-03-06 13:24:19 -05:00
eaca421063
gnu: Remove go-github-com-ccding-go-stun.
...
* gnu/packages/syncthing.scm (go-github-com-ccding-go-stun): Remove variable.
2018-03-06 13:24:19 -05:00
bb0a84f89d
gnu: Remove go-github-com-xtaci-kcp-go.
...
* gnu/packages/syncthing.scm (go-github-com-xtaci-kcp-go): Remove variable.
2018-03-06 13:24:19 -05:00
78f19a4754
gnu: Remove go-github-com-xtaci-smux.
...
* gnu/packages/syncthing.scm (go-github-com-xtaci-smux): Remove variable.
2018-03-06 13:24:15 -05:00
77412c45b1
gnu: re2: Update to 2018-03-01.
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* gnu/packages/regex.scm (re2): Update to 2018-03-01.
2018-03-06 18:23:42 +01:00
37204750b1
gnu: feh: Update to 2.25.
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* gnu/packages/image-viewers.scm (feh): Update to 2.25.
2018-03-06 18:22:26 +01:00
6836c228ae
gnu: iceauth: Update to 1.0.8.
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* gnu/packages/xorg.scm (iceauth): Update to 1.0.8.
2018-03-06 18:16:51 +01:00
6f1f8d1312
gnu: python-django: Update to 1.11.11 [fixes CVE-2018-7536 and CVE-2018-7537].
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See <https://www.djangoproject.com/weblog/2018/mar/06/security-releases/ > for
more information about the vulnerabilities.
* gnu/packages/django.scm (python-django): Update to 1.11.11.
2018-03-06 17:38:12 +01:00
c072cf57b9
gnu: samtools: Update to 1.7.
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* gnu/packages/bioinformatics.scm (samtools): Update to 1.7.
2018-03-06 16:03:04 +01:00
727d847980
gnu: htslib: Update to 1.7.
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* gnu/packages/bioinformatics.scm (htslib): Update to 1.7.
[arguments]: Remove field.
2018-03-06 16:03:04 +01:00
e325c89076
gnu: r-rhdf5: Make build reproducible.
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* gnu/packages/bioinformatics.scm (r-rhdf5)[arguments]: Remove timestamp and
host system information from settings file.
2018-03-06 16:03:04 +01:00
fe58ab013b
gnu: r-lambda-r: Run unit tests.
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* gnu/packages/statistics.scm (r-lambda-r)[native-inputs]: Add r-runit.
[arguments]: Add build phase to delete test logs.
2018-03-06 16:03:04 +01:00
08ddb98aef
gnu: r-gtools: Make output deterministic.
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* gnu/packages/statistics.scm (r-gtools)[arguments]: Add build phase to avoid
running tempdir at build time.
2018-03-06 16:03:04 +01:00
5ad13e6cdf
gnu: emacs-transmission: Update to 0.12.1.
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* gnu/packages/emacs.scm (emacs-transmission): Update to 0.12.1.
2018-03-06 12:09:02 +03:00
69611d3eac
gnu: haskell-mode: Fix find emacs-stream elisp directory.
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* gnu/packages/emacs.scm (haskell-mode)[arguments]: Find only directories with
"\\.el$" in ‘el-dir’.
2018-03-06 10:34:59 +03:00
cee03b267c
gnu: ovmf: Fix build and add FIXME.
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* gnu/packages/firmware.scm (ovmf): Replace 'invoke' with 'system*'. Add FIXME
about failing script.
2018-03-06 08:27:07 +01:00
0f2778029a
gnu: java-ops4j-pax-tinybundles: Use distribution bndlib version.
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* gnu/packages/java.scm (java-ops4j-pax-tinybundles)[arguments]<#:phases>:
Modify fix-version to use the distibution version of java-aqute-bndlib.
2018-03-05 20:42:48 +01:00
c8213ffc52
gnu: perl-email-address: Update to 1.909.
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* gnu/packages/perl.scm (perl-email-address): Update to 1.909.
2018-03-05 17:32:11 +01:00
1c3de94cff
gnu: perl-sub-quote: Update to 2.005000.
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* gnu/packages/xml.scm (perl-sub-quote): Update to 2.005000.
2018-03-05 17:32:11 +01:00
503a00597b
gnu: perl-xml-compile-cache: Update to 1.06.
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* gnu/packages/xml.scm (perl-xml-compile-cache): Update to 1.06.
2018-03-05 17:32:11 +01:00
b5de208e84
gnu: perl-xml-rss: Update to 1.60.
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* gnu/packages/xml.scm (perl-xml-rss): Update to 1.60.
2018-03-05 17:32:11 +01:00
437e5fae13
gnu: editres: Update to 1.0.7.
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* gnu/packages/xorg.scm (editres): Update to 1.0.7.
2018-03-05 17:32:10 +01:00
cc7a4bbd27
gnu: tocc, libtocc: Use HTTPS home page.
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* gnu/packages/search.scm (libtocc, tocc)[home-page]: Use HTTPS.
2018-03-05 17:32:10 +01:00
55b7cd10c2
gnu: perl-io-socket-ip: Update to 0.39.
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* gnu/packages/web.scm (perl-io-socket-ip): Update to 0.39.
2018-03-05 17:32:10 +01:00
530df311ac
gnu: perl-www-mechanize: Update to 1.87.
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* gnu/packages/web.scm (perl-www-mechanize): Update to 1.87.
2018-03-05 17:32:09 +01:00
9599339c59
gnu: openvpn: Mark up description.
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* gnu/packages/vpn.scm (openvpn)[description]: Use @dfn.
2018-03-05 17:32:09 +01:00
0d34993a65
gnu: openvpn: Update to 2.4.5.
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* gnu/packages/vpn.scm (openvpn): Update to 2.4.5.
2018-03-05 17:32:09 +01:00
211748d475
gnu: papi: Use HTTPS home page.
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* gnu/packages/profiling.scm (papi)[home-page]: Use HTTPS.
2018-03-05 17:32:08 +01:00
f7c870f78a
gnu: papi: Fix documentation location.
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* gnu/packages/profiling.scm (papi)[arguments]: Install ‘documentation’
to a customary subdirectory of /share/doc.
2018-03-05 17:32:08 +01:00
0ebc1b934d
gnu: xpra: Update to 2.2.5.
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* gnu/packages/xorg.scm (xpra): Update to 2.2.5.
2018-03-05 12:29:37 +01:00
6a4eaafee0
gnu: linux-libre@4.14: Update to 4.14.24.
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* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.24.
(%linux-libre-4.14-hash): Update hash.
2018-03-05 03:43:45 -05:00
ee483a5626
gnu: linux-libre@4.9: Update to 4.9.86.
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* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.86.
2018-03-05 03:43:02 -05:00
88b1a38e26
gnu: linux-libre@4.4: Update to 4.4.120.
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* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.120.
2018-03-05 03:42:07 -05:00
68d70f6ae3
gnu: Add emacs-terraform-mode.
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* gnu/packages/emacs.scm (emacs-terraform-mode): New variable.
2018-03-05 07:48:49 +00:00
dc97f7e20e
gnu: Add emacs-hcl-mode.
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* gnu/packages/emacs.scm (emacs-hcl-mode): New variable.
2018-03-05 07:48:48 +00:00
16718b6776
services: Add openntpd service.
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* gnu/packages/ntp.scm (openntpd)[arguments]: Add 'configure-flags to
set openntpd daemon's user and localstatedir. Add a custom phase to not
try to create said directory at install time.
* gnu/services/networking.scm (<openntpd-configuration>): New record type.
(openntpd-shepherd-service, openntpd-service-activation): New procedures.
(openntpd-service-type): New variable.
* doc/guix.texi (Networking Services): Add openntpd documentation.
2018-03-05 08:46:28 +02:00
ac1a9ce8b0
gnu: papi: Update phase style.
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* gnu/packages/profiling.scm (papi)[arguments]: Substitute INVOKE for
SYSTEM*, end phases with #t, and don't explicitly install LICENSE.txt.
2018-03-04 18:03:46 +01:00
635dd0cc96
gnu: tomb: Update phase style.
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* gnu/packages/crypto.scm (tomb)[arguments]: Substitute INVOKE for
SYSTEM* and end phases with #t.
2018-03-04 18:03:45 +01:00
9539016e3a
gnu: tomb: Use HTTPS home page.
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* gnu/packages/crypto.scm (tomb)[home-page]: Use HTTPS.
2018-03-04 18:03:45 +01:00
ed36949a9d
gnu: footswitch: Update to 0.1-2.deedd87.
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* gnu/packages/accessibility.scm (footswitch): Update to 0.1-2.deedd87.
2018-03-04 18:03:45 +01:00
bd128d5e88
gnu: footswitch: Remove redundant MKDIR-P.
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* gnu/packages/accessibility.scm (footswitch)[arguments]: Remove MKDIR-P
before INSTALL-FILE.
2018-03-04 18:03:45 +01:00
92793c7b02
gnu: gitolite: Update phase style.
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* gnu/packages/version-control.scm (gitolite): Substitute INVOKE for
SYSTEM* and end phases with #t.
2018-03-04 18:03:44 +01:00
7730b7179c
gnu: gitolite: Update to 3.6.7.
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* gnu/packages/version-control.scm (gitolite): Update to 3.6.7.
2018-03-04 18:03:44 +01:00
d035eaa304
gnu: ii, sic: Use HTTPS home pages.
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* gnu/packages/irc.scm (ii, sic)[home-page]: Use HTTPS.
2018-03-04 18:03:44 +01:00
e0dbead5a7
gnu: ii: Update to 1.8.
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* gnu/packages/irc.scm (ii): Update to 1.8.
2018-03-04 18:03:44 +01:00
53244d1ffa
gnu: cloc: Update phase style.
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* gnu/packages/code.scm (cloc)[arguments]: Substitute INVOKE for SYSTEM*
and end phases with #t.
2018-03-04 18:03:44 +01:00
95943ed7dc
gnu: cloc: Update to 1.76.
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* gnu/packages/code.scm (cloc): Update to 1.76.
[source]: Update origin URI scheme.
[inputs]: Add perl-parallel-forkmanager.
2018-03-04 18:03:43 +01:00
03b7195794
gnu: liblo: Mark up description.
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* gnu/packages/audio.scm (liblo)[description]: Use @dfn.
2018-03-04 18:03:43 +01:00
3e57b7d99b
gnu: multipath-tools: Update to 0.7.4.
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* gnu/packages/linux.scm (multipath-tools): Update to 0.7.4.
[source]: Download using HTTPS.
2018-03-04 17:54:40 +01:00
5275f69e6e
gnu: freexl: Update to 1.0.5 [security fixes].
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Fixes CVE-2018-7435, CVE-2018-7436, CVE-2018-7437, CVE-2018-7438 and
CVE-2018-7439.
* gnu/packages/xml.scm (freexl): Update to 1.0.5.
2018-03-04 17:54:40 +01:00
5b0b520e22
gnu: ceph: Update to 12.2.4.
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* gnu/packages/patches/ceph-disable-cpu-optimizations.patch: Adjust to
upstream changes.
* gnu/packages/patches/ceph-disable-unittest-throttle.patch: Delete file.
* gnu/packages/patches/ceph-rocksdb-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/storage.scm (ceph): Update to 12.2.4.
[source](patches): Adjust.
[arguments]: Add "-DWITH_BABELTRACE=OFF" in #:configure-flags. Build with
CMAKE-3.11. Adjust file substitutions. Wrap 'ceph' executable.
[native-inputs]: Add GPERF.
[inputs]: Replace BOOST with BOOST-1.66. Add PYTHON2-PRETTYTABLE.
2018-03-04 17:54:40 +01:00
1568cc14fa
gnu: Add cmake@3.11.
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* gnu/packages/cmake.scm (cmake-3.11): New public variable.
2018-03-04 17:54:40 +01:00
Christopher Baines