bb47aca5e7
gnu: Add hdf5-1.10.
...
* gnu/packages/maths.scm (hdf5-1.10): New variable.
2018-11-07 12:26:33 +01:00
66044a3698
gnu: glm: Update to 0.9.9.3.
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* gnu/packages/maths.scm (glm): Update to 0.9.9.3.
2018-11-05 23:46:38 +01:00
39528a5ee9
gnu: r-pracma: Update to 2.1.8.
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* gnu/packages/maths.scm (r-pracma): Update to 2.1.8.
[propagated-inputs]: Remove r-quadprog.
2018-10-30 21:48:10 +01:00
4795e5e177
gnu: units: Update to 2.18.
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* gnu/packages/maths.scm (units): Update to 2.18.
2018-10-27 04:47:56 +02:00
82cbe4e046
gnu: maxima: Update to 5.42.0.
...
* gnu/packages/maths.scm (maxima): Update to 5.42.0.
2018-10-20 14:38:45 -04:00
a8fa86c477
gnu: Add python-cvxopt.
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* gnu/packages/maths.scm (python-cvxopt, python2-cvxopt): New variables.
2018-10-11 10:30:30 +02:00
9e2aa70bad
gnu: petsc-openmpi: Configure with support for MUMPS solver.
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* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add metis,
mumps-openmpi, scalapack and pt-scotch.
[arguments]: Add "--with-PACKAGENAME=1" flags. Move 'mpi-setup' phase
ahead of 'configure' phase.
Signed-off-by: Leo Famulari <leo@famulari.name>
2018-10-04 18:21:17 -04:00
116af86f14
gnu: octave: Add a search path for CURLOPT_CAPATH.
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* gnu/packages/maths.scm (octave)[native-search-paths]: New field.
2018-09-24 21:42:12 -04:00
45201bf245
gnu: hdf5-parallel-openmpi: Really enable parallel build.
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This fix ensures that the H5_HAVE_PARALLEL identifier is correctly set
in the file H5pubconf.h.
* gnu/packages/maths.scm (hdf5-parallel-openmpi)[arguments]: Add
the "--enable-parallel" flag to the list of configure flags. Remove
the incompatible "--enable-cxx" flag. Add 'mpi-setup' phase.
Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2018-09-21 17:04:37 +02:00
b0d1e60fff
gnu: hdf5: Allow for absence of utility script.
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* gnu/packages/maths.scm (hdf5)[arguments]: Add condition to 'split'
phase to check for existence of h5fc script.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-21 17:04:37 +02:00
9923d5a40f
gnu: Use INVOKE & return #t from Ruby package phases.
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* gnu/packages/maths.scm (ruby-asciimath)[arguments]: Return #t from
all phases.
* gnu/packages/rails.scm (ruby-debug-inspector)[arguments]: Substitute
INVOKE for SYSTEM*.
* gnu/packages/ruby.scm (ruby-permutation, ruby-blankslate)
(ruby-minitest-pretty-diff, ruby-guard, ruby-rb-inotify, ruby-tins)
(ruby-gem-hadar, ruby-term-ansicolor, ruby-json-pure)
(ruby-activesupport, ruby-redcloth, ruby-netrc, ruby-unf-ext, ruby-yard)
(ruby-turn, ruby-sqlite3, ruby-shoulda-context, ruby-shoulda-matchers)
(ruby-shoulda, ruby-httpclient, ruby-ansi, ruby-bio-commandeer)
(ruby-rubytest, ruby-brass, ruby-qed, ruby-ae, ruby-lemon, ruby-hashery)
(ruby-rc4, ruby-concurrent)[arguments]: Likewise.
2018-09-20 04:17:04 +02:00
4d679255da
gnu: glm: Update to 0.9.9.2.
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* gnu/packages/maths.scm (glm): Update to 0.9.9.2.
2018-09-19 15:20:21 +02:00
f03c4ec649
gnu: arpack-ng: Update to 3.6.3.
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* gnu/packages/maths.scm (arpack-ng): Update to 3.6.3.
2018-09-19 15:20:21 +02:00
622ef2b90a
gnu: arpack-ng: Don't use unstable tarball.
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* gnu/packages/maths.scm (arpack-ng)[source]: Use GIT-FETCH.
2018-09-19 15:20:21 +02:00
daa6036fda
gnu: Add openblas-ilp64.
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* gnu/packages/maths.scm (openblas-ilp64): New variable.
Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2018-09-14 11:23:07 +02:00
bbe46a4af5
mpi: Factorize openmpi setup build phase.
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* gnu/packages/mpi.scm (%openmpi-setup): New variable.
* gnu/packages/maths.scm (scalapack, slepc-openmpi, mumps-openmpi)
(superlu-dist, p4est, petsc-openmpi, hypre-openmpi, elemental)
(sundials-openmpi, arpack-ng-openmpi)[arguments]: Use it in #:phases.
2018-09-11 20:29:04 -05:00
aa82260bc0
gnu: arpack-ng-openmpi: Fix build.
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* gnu/packages/maths.scm (arpack-ng-openmpi)[arguments]: Add
'set-test-environment phase.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 17:46:29 +02:00
b38827096f
gnu: mcrl2: Use HTTPS home page.
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* gnu/packages/maths.scm (mcrl2)[home-page]: Use HTTPS.
2018-09-10 22:54:36 +02:00
a617fd55df
gnu: OpenBLAS: Update source URI.
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* gnu/packages/maths.scm (openblas)[source](uri): Use the more stable
SourceForge mirror.
2018-09-09 16:43:11 +02:00
e9c1492f66
gnu: glm: Update to 0.9.9.1.
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* gnu/packages/maths.scm (glm): Update to 0.9.9.1.
2018-09-09 16:43:10 +02:00
3f5e6ccf9b
slepc: Upgrade to 3.9.2.
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* gnu/packages/maths.scm (slepc): Upgrade to 3.9.2.
2018-09-05 08:10:38 -05:00
c15be1280e
petsc: Upgrade to 3.9.3.
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* gnu/packages/maths.scm (petsc): Upgrade to 3.9.3.
[arguments]: Remove unnecessary configure flags.
2018-09-05 08:10:37 -05:00
a3a99e27bb
petsc: Move example code to "examples" output.
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* gnu/packages/maths.scm (petsc)[arguments]: New 'move-examples' phase.
2018-09-05 08:10:37 -05:00
b26e4f26ff
gnu: Add SUNDIALS.
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* gnu/packages/maths.scm (sundials, sundials-openmpi): New variables.
2018-09-05 08:10:31 -05:00
71ca16b58d
gnu: petsc-openmpi: Configure with support for hdf5 data format.
...
* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add
hdf5-parallel-openmpi.
[arguments]: Add '--with-hdf5-include' and '--with-hdf5-lib'
flags. Add 'set-test-environment' phase.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-04 15:22:48 +02:00
c702749dfd
gnu: arpack-ng: Update to 3.6.2.
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* gnu/packages/maths.scm (arpack-ng): Update to 3.6.2.
2018-09-03 19:09:01 +02:00
91bb495b85
gnu: arpack-ng: Drop redundant phase.
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* gnu/packages/maths.scm (arpack-ng)[arguments]: Remove.
2018-09-03 19:09:01 +02:00
220458b098
gnu: hypre: Update to 2.14.0.
...
* gnu/packages/maths.scm (hypre): Update to 2.14.0
2018-08-31 10:08:00 -05:00
e29bb27d88
gnu: r-pracma: Update to 2.1.5.
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* gnu/packages/maths.scm (r-pracma): Update to 2.1.5.
2018-08-28 22:31:00 +02:00
a7bc1588e6
Merge branch 'staging'
2018-08-19 15:24:59 +02:00
b13ba3f1ba
gnu: gnuplot: Update to 5.2.4.
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* gnu/packages/maths.scm (gnuplot): Update to 5.2.4.
2018-08-18 21:21:52 -04:00
7fe491fbc8
gnu: cddlib: Update to 0.94i.
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* gnu/packages/maths.scm (cddlib): Update to 0.94i.
2018-08-18 12:04:54 -04:00
b66741edc9
gnu: octave: Update to 4.4.1.
...
* gnu/packages/maths.scm (octave): Update to 4.4.1.
(qtoctave)[source]: Remove obsolete patch.
* gnu/packages/patches/qtoctave-qt-5.11-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-17 10:47:52 -04:00
f133e24481
gnu: armadillo: Update to 9.100.5.
...
* gnu/packages/maths.scm (armadillo): Update to 9.100.5.
2018-08-17 00:38:17 +02:00
df570bf271
Merge branch 'master' into staging
2018-08-16 20:56:38 +02:00
e405c0bcd9
gnu: armadillo: Update to 9.100.4.
...
* gnu/packages/maths.scm (armadillo): Update to 9.100.4.
2018-08-16 02:40:59 +02:00
df1bc82b69
gnu: ocaml-gsl: Update to 1.22.0.
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* gnu/packages/maths.scm (ocaml-gsl): Update to 1.22.0.
2018-08-15 08:11:58 -04:00
9285f8bbae
gnu: coda: Update to 2.19.
...
* gnu/packages/maths.scm (coda): Update to 2.19.
2018-08-13 22:18:09 -04:00
869250809b
Merge branch 'master' into staging
2018-07-30 18:08:28 +02:00
f419abea22
gnu: openblas: Update to 0.3.2.
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* gnu/packages/maths.scm (openblas): Update to 0.3.2.
2018-07-30 15:32:10 +02:00
077d66ed42
gnu: mcrl2: Build with modular qt.
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* gnu/packages/maths.scm (mcrl2)[inputs]: Replace qt with qtbase.
2018-07-29 20:00:30 +03:00
1af575f04d
Merge branch 'master' into staging
2018-07-28 18:34:59 +02:00
48d7ac175f
gnu: openlibm: Update to 0.6.0.
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* gnu/packages/maths.scm (openlibm): Update to 0.6.0.
2018-07-28 18:12:13 +02:00
46bda5eb7a
gnu: glm: Update home page.
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* gnu/packages/maths.scm (glm)[home-page]: Use HTTPS.
2018-07-28 17:56:59 +02:00
5ea4b5943d
gnu: glm: Update to 0.9.9.0.
...
* gnu/packages/maths.scm (glm): Update to 0.9.9.0.
[source](uri): Change to new download location.
2018-07-28 17:55:04 +02:00
57ba8d0673
gnu: double-conversion: Update to 3.0.0.
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* gnu/packages/maths.scm (double-conversion): Update to 3.0.0.
2018-07-22 18:23:43 +02:00
b343850ea3
gnu: double-conversion: Update home page.
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* gnu/packages/maths.scm (double-conversion)[home-page]: Update to redirected.
2018-07-22 18:23:42 +02:00
c215fa2135
gnu: octave: Add qhull support.
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* gnu/packages/maths.scm (octave)[inputs]: Add qhull.
2018-07-17 15:29:05 -04:00
d65f0661f3
gnu: Add qhull.
...
* gnu/packages/maths.scm (qhull): New variable.
2018-07-17 12:49:20 -04:00
19bb999a50
gnu: openblas: Update to 0.3.1.
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* gnu/packages/patches/openblas-fix-tests-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/maths.scm (openblas): Update to 0.3.1.
[arguments, native-inputs]: Don't apply 'openblas-fix-tests-i686.patch'.
2018-07-13 12:31:49 +02:00
Ricardo Wurmus