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28866 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice 83e8a302f2
gnu: lunzip: Update to 1.10. 
* gnu/packages/compression.scm (lunzip): Update to 1.10.
 2018-02-08 05:06:54 +01:00
Tobias Geerinckx-Rice c28377802e
gnu: nim: Update to 0.17.2. 
* gnu/packages/nim.scm (nim): Update to 0.17.2.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice 0386cdd373
gnu: luajit, lua5.x-bitop: Use HTTPS home pages. 
* gnu/packages/lua.scm (luajit, make-lua-bitop)[home-page]: Use HTTPS.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice a093bb6967
gnu: luajit: Make available as ‘luajit’. 
* gnu/packages/lua.scm (luajit)[arguments]: Add a ‘create-luajit-symlink’
phase to make the interpreter available simply as ‘luajit’.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice 906f1b48e2
gnu: luajit: Update to 2.1.0-beta3. 
* gnu/packages/lua.scm (luajit): Update to 2.1.0-beta3.
[source]: Remove symlinks patch.
* gnu/packages/patches/luajit-symlinks.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice b2d00af723
gnu: mc: Substitute more FHS file names. 
* gnu/packages/mc.scm (mc)[arguments]: Add some more files to the
‘patch-FHS-file-names’ phase.
 2018-02-08 05:01:41 +01:00
Leo Famulari 0b18c0b0de
gnu: mupdf: Fix CVE-2017-17858. 
* gnu/packages/patches/mupdf-CVE-2017-17858.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (mupdf)[source]: Use it.
 2018-02-07 21:17:57 -05:00
Marius Bakke 53f826cd0f
gnu: python2-tqdm: Work around missing flake8 propagation. 
* gnu/packages/python.scm (python-tqdm)[properties]: Declare python2 variant.
(python2-tqdm): Use STRIP-PYTHON2-VARIANT.
[native-inputs]: Add PYTHON-ENUM34.
 2018-02-07 17:05:23 +01:00
Marius Bakke b7049b2e23
Revert "gnu: python2-flake8: Fix python-enum34 propagation." 
This triggers a rebuild of 1111 packages, so let's work around it on the few
that are affected instead.

This reverts commit 01af1e11a6.
 2018-02-07 17:00:45 +01:00
Ricardo Wurmus b617a9fe23
etc: Add SELinux policy for the daemon. 
* etc/guix-daemon.cil.in: New file.
* Makefile.am (dist_selinux_policy_DATA): Define it.
* configure.ac: Handle --with-selinux-policy-dir.
* doc/guix.texi (SELinux Support): New section.
 2018-02-07 15:41:23 +01:00
Marius Bakke 0a2d977ac1
gnu: python-mando: Remove version 0.3.1. 
* gnu/packages/python.scm (python-mando-0.3.1): Remove variable.
 2018-02-07 15:34:09 +01:00
Marius Bakke 5861f9c9d6
gnu: python-radon: Update to 2.2.0. 
* gnu/packages/python.scm (python-radon): Update to 2.2.0.
[arguments]: Replace CHECK-PHASE with custom test command.
[propagated-inputs]: Replace PYTHON-MANDO-0.3.1 with PYTHON-MANDO.
[native-inputs]: Remove PYTHON-FLAKE8, PYTHON-TOX and PYTHON-PARAMUNITTEST.
Add PYTHON-PYTEST-MOCK.
 2018-02-07 15:34:09 +01:00
Marius Bakke f7bd4f2372
gnu: python-pytest-mock: Update to 1.6.3. 
* gnu/packages/check.scm (python-pytest-mock): Update to 1.6.3.
[source]: Use tarball relase.
[native-inputs]: Remove UNZIP.  Add PYTHON-SETUPTOOLS-SCM.
 2018-02-07 15:34:09 +01:00
Marius Bakke 50c84dd5a6
gnu: python-mando: Fix indentation. 
* gnu/packages/python.scm (python-mando): Indent with emacs.
 2018-02-07 15:34:09 +01:00
Marius Bakke 2aa33bf41b
gnu: python-mando: Update to 0.6.4. 
* gnu/packages/python.scm (python-mando): Update to 0.6.4.
[propagated-inputs]: Add PYTHON-SIX.
[native-inputs]: Remove PYTHON-SPHINX and PYTHON-PARAMUNITTEST.  Add PYTHON-PYTEST.
 2018-02-07 15:34:09 +01:00
Marius Bakke 3cbddeec39
gnu: python-tqdm: Update to 4.19.5. 
* gnu/packages/python.scm (python-tqdm): Update to 4.19.5.
[native-inputs]: Remove PYTHON-NOSE-TIMER and PYTHON-VIRTUALENV.
 2018-02-07 15:34:09 +01:00
Marius Bakke 01af1e11a6
gnu: python2-flake8: Fix python-enum34 propagation. 
* gnu/packages/python.scm (python2-flake8)[propagated-inputs]: Replace
PYTHON2-ENUM with PYTHON2-ENUM34.
 2018-02-07 15:34:09 +01:00
Marius Bakke 9e94d063ab
gnu: multiqc: Update to 1.4. 
* gnu/packages/bioinformatics.scm (multiqc): Update to 1.4.
[propagated-inputs]: Remove PYTHON-ENUM34.
 2018-02-07 15:34:08 +01:00
Ricardo Wurmus 799c3c868f
gnu: sablevm: Fix broken build. 
* gnu/packages/java.scm (sablevm)[arguments]: Change threading type.
 2018-02-06 23:15:35 +01:00
Tobias Geerinckx-Rice 5ac1143dc4
gnu: whois: Expand synopsis & description. 
* gnu/packages/networking.scm (whois)[synopsis, description]: Expand.
 2018-02-06 20:02:12 +01:00
Tobias Geerinckx-Rice 11b1f89ec2
gnu: librep: Update to 0.92.7. 
* gnu/packages/sawfish.scm (librep): Update to 0.92.7.
 2018-02-06 20:02:12 +01:00
Tobias Geerinckx-Rice ccfe4aa1c0
gnu: asciidoc: Update to 8.6.10. 
* gnu/packages/documentation.scm (asciidoc): Update to 8.6.10.
[source]: Switch to new code host.
[arguments]: Add new ‘bootstrap’ phase...
[native-inputs]: ...and required autoconf.
[home-page]: Point to a more recently updated instance.
 2018-02-06 20:02:12 +01:00
Tobias Geerinckx-Rice 1ffa065c44
gnu: perl-test-simple: Update to 1.302122. 
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302122.
 2018-02-06 20:02:11 +01:00
Christopher Baines 8db8bf921d
gnu: build: linux-boot: Remove bind-mount export. 
bind-mount is not contained within this module.

* gnu/build/linux-boot.scm: Remove bind-mount export.
 2018-02-06 17:19:28 +00:00
Ludovic Courtès 71e789319c
gnu: hwloc: Add 2.0.0. 
* gnu/packages/mpi.scm (hwloc-2.0): New variable.
* gnu/packages/patches/hwloc-tests-without-sysfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-02-06 17:34:34 +01:00
Oleg Pykhalov fbcad8843a
gnu: Add python-pyaudio. 
* gnu/packages/audio.scm (python-pyaudio): New public variable.
 2018-02-06 19:16:51 +03:00
Stefan Reichör 19d93ef537
gnu: Add curseradio. 
* gnu/packages/music.scm (curseradio): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-06 17:02:46 +01:00
Ludovic Courtès 9805ad6f87
gnu: julia: Don't invoke /sbin/ldconfig. 
Reported by Marco van Hulten <marco@hulten.org>
in <https://bugs.gnu.org/30282>.

* gnu/packages/julia.scm (julia)[arguments] <'hardcode-soname-map>:
Patch out 'ldconfig' invocations.
 2018-02-06 16:12:50 +01:00
Ludovic Courtès d40b5684c5
gnu: julia: Adjust libgit2 tests. 
* gnu/packages/julia.scm (julia)[arguments] <'disable-broken-tests>:
Patch libgit2.jl.
 2018-02-06 16:12:50 +01:00
Ludovic Courtès 4e847986bc
gnu: libssh: Update to commit 239d0f7 of branch 'v0-7'. 
* gnu/packages/ssh.scm (libssh): Update to 239d0f7.
 2018-02-06 16:12:50 +01:00
Mathieu Othacehe 924b96db0a
gnu: gpsbabel: Update to 1.5.4 and fix build. 
* gnu/packages/patches/gpsbabel-minizip.patch: New file.
* gnu/packages/patches/gpsbabel-qstring.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gps.scm (gpsbabel): Update to 1.5.4,
[source]: add two previous patches to fix build,
[snippet]: remove "gpsbabel" directory excursion,
[arguments]: ditto.
 2018-02-06 15:50:09 +01:00
Mathieu Othacehe 5365596476
gnu: Add gpxsee. 
* gnu/packages/gps.scm (gpxsee): New variable.
 2018-02-06 15:50:04 +01:00
Tobias Geerinckx-Rice 9cc03bbf0d
gnu: expect: Update to 5.45.4. 
* gnu/packages/tcl.scm (expect): Update to 5.45.4.
 2018-02-06 14:42:46 +01:00
Tobias Geerinckx-Rice 0e588d2f02
gnu: shotwell: Update to 0.27.4. 
* gnu/packages/gnome.scm (shotwell): Update to 0.27.4.
 2018-02-06 14:42:46 +01:00
Konrad Hinsen 4283653cb0
gnu: Add python-isoweek. 
* gnu/packages/python.scm (python-isoweek, python2-isoweek): New variables.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-02-06 12:10:17 +01:00
Danny Milosavljevic 7e2dd00bfb
gnu: Add python-funcy. 
* gnu/packages/python.scm (python-funcy, python2-funcy): New variables.
 2018-02-06 12:04:21 +01:00
Danny Milosavljevic 89c57efd78
gnu: Add python-whatever. 
* gnu/packages/python.scm (python-whatever, python2-whatever): New variables.
 2018-02-06 12:04:19 +01:00
Ricardo Wurmus e9e78d2cec
gnu: Add r-heatmaply. 
* gnu/packages/cran.scm (r-heatmaply): New variable.
 2018-02-06 11:21:57 +01:00
Ricardo Wurmus 2e9d187b87
gnu: Add r-seriation. 
* gnu/packages/cran.scm (r-seriation): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus 8e5e26d2ab
gnu: Add r-webshot. 
* gnu/packages/cran.scm (r-webshot): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus 7fe49f2a8a
gnu: Add r-gclus. 
* gnu/packages/cran.scm (r-gclus): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus ffb59bcef7
gnu: Add r-qap. 
* gnu/packages/cran.scm (r-qap): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus f285346aed
gnu: Add r-tsp. 
* gnu/packages/cran.scm (r-tsp): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus 2058e37d61
gnu: Add r-processx. 
* gnu/packages/cran.scm (r-processx): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus a3257d427e
gnu: Add r-debugme. 
* gnu/packages/cran.scm (r-debugme): New variable.
 2018-02-06 11:21:56 +01:00
Danny Milosavljevic 18adb1f00d
gnu: guile-sqlite3: Use git-version. 
* gnu/packages/guile.scm [version]: Use git-version.
 2018-02-06 09:49:08 +01:00
Danny Milosavljevic 0362e5820a
gnu: guile-sqlite3: Update to 0.0-2.21f35ca. 
* gnu/packages/guile.scm (guile-sqlite3): Update to 0.0-2.21f35ca.
 2018-02-06 09:01:41 +01:00
Leo Famulari 127dc7c7be
gnu: python-llfuse: Update to 1.3.2. 
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.3.2.
 2018-02-05 20:16:48 -05:00
Ethan R. Jones 956ba99cb7
gnu: Add python-gyp. 
* gnu/packages/python.scm (python-gyp, python2-gyp): New variables.
 2018-02-05 18:04:34 -05:00
Kei Kebreau 26ecbaf866
gnu: bigloo: Update to 4.3b. 
* gnu/packages/scheme.scm (bigloo): Update to 4.3b.
[arguments]: Add "--disable-patch" to configure flags.  Add substitution to
compile Bigloo with the correct runpath. Substitute 'invoke' for '*system*'.
 2018-02-05 17:13:56 -05:00