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29994 Commits

Author SHA1 Message Date
Marius Bakke 49057c8fc1
Revert "gnu: python2-tqdm: Work around missing flake8 propagation." 
This reverts commit 53f826cd0f.
 2018-02-20 17:56:06 +01:00
Marius Bakke 7c9a1d5e80
Revert "Revert "gnu: python2-flake8: Fix python-enum34 propagation."" 
This reverts commit b7049b2e23.
 2018-02-20 17:55:53 +01:00
Marius Bakke 5fa6b52a54
gnu: qemu: Update to 2.11.1. 
* gnu/packages/patches/qemu-CVE-2017-15038.patch,
gnu/packages/patches/qemu-CVE-2017-15289.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/virtualization.scm (qemu): Update to 2.11.1
[source](patches): Remove.
 2018-02-20 17:44:43 +01:00
Marius Bakke 7f69459aca
Merge branch 'master' into staging 2018-02-20 17:36:56 +01:00
Marius Bakke b1989c1250
gnu: freetype: Fix CVE-2018-6942. 
* gnu/packages/patches/freetype-CVE-2018-6942.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (freetype)[replacement]: New field.
(freetype/fixed): New variable.
 2018-02-20 16:26:20 +01:00
Marius Bakke fb9d035015
gnu: python-pyopenssl: Update to 17.5.0. 
* gnu/packages/python-crypto.scm (python-pyopenssl): Update to 17.5.0.
 2018-02-20 16:03:07 +01:00
Marius Bakke 0ba631b90f
gnu: python-cryptography: Update to 2.1.4. 
* gnu/packages/python-crypto.scm (python-cryptography-vectors,
python-cryptography): Update to 2.1.4.
 2018-02-20 16:03:00 +01:00
Marius Bakke 5c73e162e2
gnu: imagemagick: Update to 6.9.9-35. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-35.
 2018-02-20 15:04:28 +01:00
Marius Bakke 1eaba63f73
gnu: calendar.scm: Use license: prefix. 
* gnu/packages/calendar.scm (libical, khal, remind, libhdate): Use license: prefix.
 2018-02-20 14:58:52 +01:00
Marius Bakke 9d13e77adb
gnu: rrdtool: Use a fixed version of tzdata for tests. 
* gnu/packages/rrdtool.scm (rrdtool)[native-inputs]: Replace TZDATA with
TZDATA-FOR-TESTS.
 2018-02-20 14:58:52 +01:00
Marius Bakke 4a82722a65
gnu: gtk+: Update to 3.22.28. 
* gnu/packages/gtk.scm (gtk+): Update to 3.22.28.
 2018-02-20 14:55:58 +01:00
Marius Bakke f55ef78b5c
gnu: gtk+@2: Update to 2.24.32. 
* gnu/packages/patches/gtk2-fix-failing-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (gtk+-2): Update to 2.24.32.
[source]: Remove 'gtk2-fix-failing-test.patch'.
 2018-02-20 14:55:58 +01:00
Marius Bakke ac85920a74
gnu: bluez: Update to 5.48. 
* gnu/packages/linux.scm (bluez): Update to 5.48.
 2018-02-20 14:55:58 +01:00
Rutger Helling 2395181a67
gnu: Update copyright line. 
* gnu/packages/gl.scm: Update copyright line for commit 7dbd98a.
 2018-02-20 09:19:30 +01:00
Rutger Helling 7dbd98a1d5
gnu: mesa: Update to 17.3.5. 
* gnu/packages/gl.scm (mesa): Update to 17.3.5.
 2018-02-20 09:15:55 +01:00
Leo Famulari 62868f124c
gnu: tzdata: Preserve directory layout from before tzdata 2018a. 
tzdata 2018a instroduced some changes to the build and installation
procedures that commit e2832cdc3 failed to address. They are described
in the NEWS file.

This is a followup to commit e2832cdc35.

* gnu/packages/base.scm (tzdata)[arguments]: Set TZDEFAULT. Remove the
time-zone utility programs in a build phase.
 2018-02-19 23:57:36 -05:00
Tobias Geerinckx-Rice 775989c7a8
gnu: nix, patchelf: Use HTTPS for nixos.org home pages. 
* gnu/packages/elf.scm (patchelf)[home-page]: Use HTTPS.
* gnu/packages/package-management.scm (nix)[home-page]: Likewise.
 2018-02-20 05:02:44 +01:00
Tobias Geerinckx-Rice ba3913a5d3
gnu: font-hack: Update to 3.002. 
* gnu/packages/fonts.scm (font-hack): Update to 3.002.
 2018-02-20 03:31:09 +01:00
Tobias Geerinckx-Rice 3c747a080f
gnu: nss-certs: Update phase style. 
* gnu/packages/certs.scm (nss-certs)[arguments]: Use MODIFY-PHASES
syntax, substitute INVOKE for SYSTEM*, and end phas with #t.
 2018-02-20 03:27:56 +01:00
Tobias Geerinckx-Rice 280b62b074
gnu: pciutils: Update to 3.5.6. 
* gnu/packages/pciutils.scm (pciutils): Update to 3.5.6.
 2018-02-20 02:56:36 +01:00
Tobias Geerinckx-Rice 5fff9d9db4
gnu: perl-uri: Update to 1.73. 
* gnu/packages/web.scm (perl-uri): Update to 1.73.
[native-inputs]: Add perl-test-needs.
 2018-02-20 02:56:36 +01:00
Leo Famulari e2832cdc35
gnu: tzdata: Update to 2018c. 
* gnu/packages/base.scm (tzdata): Update to 2018c.
 2018-02-19 20:39:06 -05:00
Tobias Geerinckx-Rice 1f577b469a
gnu: chromaprint: Update to 1.4.3. 
* gnu/packages/mp3.scm (chromaprint): Update to 1.4.3.
[source]: Update URI.
 2018-02-19 23:14:02 +01:00
Tobias Geerinckx-Rice 6080632df8
gnu: socat: Update to 1.7.3.2. 
* gnu/packages/networking.scm (socat): Update to 1.7.3.2.
 2018-02-19 23:14:02 +01:00
Tobias Geerinckx-Rice 5404f1c29d
gnu: setbfree: Update to 0.8.5. 
* gnu/packages/music.scm (setbfree): Update to 0.8.5.
 2018-02-19 23:14:01 +01:00
Tobias Geerinckx-Rice 48fbb24c90
gnu: ola: Update to 0.10.6. 
* gnu/packages/lighting.scm (ola): Update to 0.10.6.
 2018-02-19 23:14:01 +01:00
Tobias Geerinckx-Rice 8af77fe96b
gnu: pciutils: Use HTTPS home page. 
* gnu/packages/pciutils.scm (pciutils)[home-page]: Use HTTPS.
 2018-02-19 23:14:01 +01:00
ng0 54a402ddd1
gnu: neomutt: Update to 20171215. 
* gnu/packages/mail.scm (neomutt): Update to 20171215.
[inputs]: Move "docbook-xsl" to [native-inputs].
[native-inputs]: Remove "autoconf". Add "tcl", "docbook-xml", "w3m".
[argumnets]: Switch to autosetup based build. Add new phases "fix-sasl-test",
"fix-docbook". Remove phase "autoconf".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 22:31:09 +01:00
mephi42 b91004c2f5
gnu: Add basic support for s390x-linux-gnu targets. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add
  "s390x-linux".
* gnu/packages/linux.scm (system->linux-architecture): Add "s390"
  prefix.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 22:22:21 +01:00
Ludovic Courtès 900be977ae
tests: Remove outdated comment. 
* gnu/tests/base.scm (run-basic-test): Remove outdated comment.
 2018-02-19 22:04:11 +01:00
Ludovic Courtès 27a2c9c3e0
marionette: Use QEMU's "VM channel" mechanism. 
* gnu/tests.scm (<marionette-configuration>)[device]: Default to
"/dev/virtio-ports/org.gnu.guix.port.0".
* gnu/tests.scm (marionette-shepherd-service): Remove (guix build
syscalls) from 'modules'.  Remove 'tcsetattr' call from 'start'.
* gnu/build/marionette.scm (make-marionette): Use "-virtserialport"
instead of "-virtconsole".
 2018-02-19 22:04:11 +01:00
Ludovic Courtès ce0a62f6c5
services: console-font: Don't emit the IUTF8 console code. 
Fixes <https://bugs.gnu.org/30505>.

* gnu/services/base.scm (unicode-start): Remove 'display' call to FD for
"\x1b%G" console code.
 2018-02-19 22:04:10 +01:00
Ludovic Courtès 7ffd6180a7
nls: Update 'fr' translation. 2018-02-19 22:04:10 +01:00
Hartmut Goebel 7e4e3df4e8
gnu: qqc2-desktop-style: Fix missing input 'qtquickcontrols2'. 
* gnu/packages/kde-frameworks.scm (qqc2-desktop-style)<inputs>:
  Add qtquickcontrols2.
 2018-02-19 20:30:53 +01:00
Ricardo Wurmus 21169e3148
gnu: mcomix: Disable tests. 
* gnu/packages/image-viewers.scm (mcomix)[arguments]: Disable tests.

Fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=30523>.
 2018-02-19 18:33:19 +01:00
Ricardo Wurmus ab36fb17e6
gnu: nss-pam-ldapd: Update to 0.9.9. 
* gnu/packages/openldap.scm (nss-pam-ldapd): Update to 0.9.9.
 2018-02-19 18:16:16 +01:00
Marius Bakke 5f3155ee6c
gnu: ddrescue: Update to 1.23. 
* gnu/packages/disk.scm (ddrescue): Update to 1.23.
 2018-02-19 17:47:11 +01:00
Marius Bakke 4dc159bb62
gnu: ffmpeg@2.8: Update to 2.8.14. 
* gnu/packages/video.scm (ffmpeg-2.8): Update to 2.8.14.
 2018-02-19 15:03:44 +01:00
Rutger Helling 4ecfc16839
gnu: xpra: Disable abstract X11 sockets. 
* gnu/packages/xorg.scm (xpra): Disable abstract X11 sockets.
 2018-02-19 12:56:47 +01:00
Efraim Flashner d81a739a1f
gnu: clisp: Fix building on aarch64-linux. 
* gnu/packages/lisp.scm (clisp)[arguments]: Remove 'bindings/glibc' module.
 2018-02-19 11:30:48 +02:00
Ricardo Wurmus 79c6af13d0
gnu: r-delayedmatrixstats: Update to 1.0.3. 
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.0.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus 59b2864d6c
gnu: r-scater: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.6.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus d578278e35
gnu: r-gviz: Update to 1.22.3. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.22.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus ca7855fcd2
gnu: r-gprofiler: Update to 0.6.4. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.4.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 8877ab432e
gnu: r-ensembldb: Update to 2.2.2. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus ebec98ae1d
gnu: r-seurat: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.1.
[propagated-inputs]: Remove r-nmf; add r-metap.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 3118b28644
gnu: r-qtl: Update to 1.42-7. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.42-7.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 824c200475
gnu: r-genomicranges: Update to 1.30.2. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus e8484711c6
gnu: r-getopt: Update to 1.20.2. 
* gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 1e898bbaea
gnu: r-pryr: Update to 0.1.4. 
* gnu/packages/statistics.scm (r-pryr): Update to 0.1.4.
 2018-02-19 09:53:04 +01:00