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11666 Commits

Author SHA1 Message Date
Ricardo Wurmus 9941e0812e ant-build-system: Keep jar manifest. 
* guix/build/ant-build-system.scm (default-build.xml): Generate default
manifest.
(strip-jar-timestamps): Repack jar archive with zip.
 2016-03-31 15:47:39 +02:00
Ricardo Wurmus ab50bba9f6 build-system/ant: Add zip. 
* guix/build-system/ant.scm (default-zip): New variable.
(lower): Add zip to native inputs.
 2016-03-31 15:47:32 +02:00
Ricardo Wurmus cb6ce89e21 build-system/r: Support "substitutable?" flag. 
* guix/build-system/r.scm (r-build): Support the "substitutable?" flag.
 2016-03-31 15:47:19 +02:00
Taylan Ulrich Bayırlı/Kammer d0457553d5 gnu: Add nmap. 
* gnu/packages/admin.scm (nmap): New variable.

Co-authored-by: Leo Famulari <leo@famulari.name>
 2016-03-31 02:08:56 -04:00
Leo Famulari dcd19c0af8 licenses: Add the nmap license. 
* guix/licenses.scm (nmap): New variable.
 2016-03-31 01:40:30 -04:00
Eric Bavier 42efe27a30 import: Add Hackage updater. 
* guix/import/hackage.scm (guix-package->hackage-name, hackage-package?)
  (latest-release): New procedures.
  (%hackage-updater): New variable.
* guix/scripts/refresh.scm (%updaters): Add it.
* doc/guix.texi (Invoking guix refresh): Mention it.
 2016-03-30 23:19:24 -05:00
Eric Bavier 2ae9c63f15 import: hackage: Silence download output. 
* guix/import/hackage.scm (hackage-fetch): Use http-fetch to avoid
  progress output from url-fetch.
 2016-03-30 23:19:24 -05:00
Eric Bavier f9ea74ad04 import: hackage: Factorize url synthesis. 
* guix/import/hackage.scm (hackage-source-url, hackage-cabal-url): New
  procedures.
  (hackage-fetch, hackage-module->sexp): Use them.
 2016-03-30 23:19:24 -05:00
Roel Janssen 4827b36d1f doc: Small fixes for typos and missing words. 
* doc/guix.texi (The Store Monad): Add a dot at the end of a sentence.
  (The Store Monad): Add "are" to make a complete sentence.
  (G-Expressions): Fix typo.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-30 23:39:47 +02:00
Chris Marusich 8a46205b41 doc: Clarify how to use the '#:python' parameter. 
* doc/guix.texi (Build Systems): Clearly distinguish between the package that
provides the Python interpreter for the build and the package that is to be
built.  Also, mention why one might want to use a specific Python version.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-30 23:39:47 +02:00
Chris Marusich 12af303f47 gnu: Add python2-s3cmd. 
* gnu/packages/python.scm (python2-s3cmd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-30 23:39:47 +02:00
Chris Marusich daeeea7154 gnu: Add python-magic. 
* gnu/packages/python.scm (python-magic, python2-magic): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-30 23:39:47 +02:00
Ludovic Courtès 3bd9672c85 ui: Add comment on the translation of "current". 
* guix/ui.scm (display-generation): Add "TRANSLATORS" comment.
 2016-03-30 23:39:47 +02:00
Ludovic Courtès d006e307b9 doc: Fix URL of gnutls-guile one-page-per-node manual. 
* doc/htmlxref.cnf: Fix gnutls-guile 'node' URL.
 2016-03-30 23:39:47 +02:00
Kei Yamashita 21d1811301 gnu: Add MilkyTracker. 
* gnu/packages/music.scm (milkytracker): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-03-30 23:45:44 +03:00
Efraim Flashner ddb8312911 gnu: python2-pbcore: Update to 1.2.8. 
* gnu/packages/bioinformatics.scm (python2-pbcore): Update to 1.2.8.
[native-inputs]: Add python2-docutils, python2-nose, python2-sphinx.
 2016-03-30 22:45:35 +03:00
rain1 96e9f097ee gnu: linux-libre: Avoid introducing timestamps into the build. 
* gnu/packages/linux.scm (linux-libre)[build-phase]: Set the
KCONFIG_NOTIMESTAMP and KBUILD_BUILD_TIMESTAMP environment variables to
avoid introducing timestamps into the build outputs.
 2016-03-30 15:22:04 -04:00
David Thompson aa2a0d4bb8 environment: Set a default value for PS1. 
* guix/scripts/environment.scm (launch-environment/container): Set PS1
  during container initialization.
 2016-03-30 09:09:40 -04:00
Efraim Flashner 8caf80fcf4 gnu: libcue: Fix source url. 
* gnu/packages/cdrom.scm (libcue)[source]: Fix url.
[home-page]: Project has moved to Github.
 2016-03-30 13:39:42 +03:00
Roel Janssen fa9f0e6c25 gnu: r-devtools: Update to 1.10.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.10.0.
   (r-devtools)[propagated-inputs]: Add r-withr.
 2016-03-30 12:02:40 +02:00
Roel Janssen a080e50c15 gnu: Add r-withr. 
* gnu/packages/statistics.scm (r-withr): New variable.
 2016-03-30 12:02:28 +02:00
Ricardo Wurmus f315f4fcab gnu: r-genomation: Update to 1.2.2. 
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.2.2.
 2016-03-30 11:59:16 +02:00
Ricardo Wurmus 571f0b63d5 gnu: r-genomicfeatures: Update to 1.22.13. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to
  1.22.13.
 2016-03-30 11:59:16 +02:00
Ricardo Wurmus ffaf72ad96 gnu: r-rtracklayer: Update to 1.30.4. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.30.4.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus ac2d8b0fb8 gnu: r-genomicalignments: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to
  1.6.3.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus 7eade1c5f9 gnu: r-summarizedexperiment: Update to 1.0.2. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to
  1.0.2.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus 53fd0f5e1d gnu: r-biostrings: Update to 2.38.4. 
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.38.4.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus 5fe3115415 gnu: r-genomicranges: Update to 1.22.4. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.22.4.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus 9cc22d28d8 gnu: r-genomeinfodb: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.6.3.
 2016-03-30 11:59:15 +02:00
Efraim Flashner 48fa9312ab gnu: libpaper: Update source url. 
Reported by shanemikel_ on irc.

* gnu/packages/ghostscript.scm (libpaper)[source]: Update source url to
download from Fedora.
[home-page]: Use https.
 2016-03-30 10:49:03 +03:00
Ludovic Courtès 61cdad351d gnu: guix: Ignore the user's 'GUILE_LOAD_COMPILED_PATH'. 
Reported by <rain1@openmailbox.org>.

* gnu/packages/package-management.scm (guix-0.10.0)[arguments]: Use '=
instead of 'prefix in call to 'wrap-program'.
 2016-03-29 22:13:20 +02:00
Rene Saavedra 3a9a4c51e8 gnu: Add libzapojit. 
* gnu/packages/gnome.scm (libzapojit): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-29 22:13:20 +02:00
Leo Famulari b7fbf297c8 gnu: khal: Disable failing tests. 
* gnu/packages/calendar.scm (khal)[arguments]: Disable failing tests in
'disable-tests' phase.
 2016-03-29 15:35:00 -04:00
Efraim Flashner d1ceedf8b1 gnu: gst-plugins-good: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.8.0.
[home-page]: Use https.
[arguments]: Disable tests that fail non-deterministically.
 2016-03-29 21:34:52 +03:00
Efraim Flashner 40dad30c5e gnu: gst-plugins-ugly: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.8.0.
[home-page]: Use https.
 2016-03-29 21:34:52 +03:00
Efraim Flashner d2b5dec5b0 gnu: python-gst: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (python-gst, python2-gst): Update to 1.8.0.
[home-page]: Use https.
 2016-03-29 21:34:52 +03:00
Efraim Flashner 70e863e53e gnu: gst-plugins-base: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.8.0.
[home-page]: Use https.
 2016-03-29 21:34:52 +03:00
Efraim Flashner ab0a56201d gnu: gstreamer: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.8.0.
 2016-03-29 21:34:52 +03:00
Ludovic Courtès 50ebd439c7 Merge branch 'version-0.10.0' 2016-03-29 16:13:41 +02:00
Ludovic Courtès f98b48dc51 gnu: guix: Update development snapshot. 
* gnu/packages/package-management.scm (guix-devel): Update to 7611393.
(guix): Set to GUIX-DEVEL.
 2016-03-29 09:35:22 +02:00
宋文武 67c2fc01a0 gnu: Add uwsgi. 
* gnu/packages/web.scm (uwsgi): New variable.
 2016-03-29 11:50:24 +08:00
宋文武 7ad1fee52e gnu: Add cgit. 
* gnu/packages/version-control.scm (cgit): New variable.
 2016-03-29 11:50:24 +08:00
Ludovic Courtès 7611393547 gnu: guix: Default to 0.10.0. 
This updates 58f0aae.

* gnu/packages/package-management.scm (guix): Set to GUIX-0.10.0.
 2016-03-28 23:54:48 +02:00
Ludovic Courtès 58f0aae5cb gnu: guix: Update to 0.10.0. 
* gnu/packages/package-management.scm (guix-0.8.3): Rename to...
(guix-0.10.0): ... this.  Adjust users.
(guix): Set to GUIX-0.10.0.
 2016-03-28 23:38:00 +02:00
Ludovic Courtès 34bf416e4a Update NEWS. 2016-03-28 22:51:18 +02:00
Ludovic Courtès 7f949db03e guix system: Warn against missing 'guix pull'. 
Suggested by Leo Famulari and others.

* guix/scripts/system.scm (maybe-suggest-running-guix-pull): New
procedure.
(perform-action): Call it when ACTION is 'reconfigure.
 2016-03-28 22:50:25 +02:00
Ludovic Courtès e2f41133e9 doc: We have even more than 3,000 packages. 
Suggested by Chris Marusich <cmmarusich@gmail.com>.

* doc/guix.texi (Limitations): Increase package count.
 2016-03-28 22:25:42 +02:00
Ludovic Courtès d70533cbe9 store: Prepend mirror.hydra.gnu.org to %DEFAULT-SUBSTITUTE-URLS. 
This allows GuixSD to default to the right list of URLs, with
mirror.hydra.gnu.org coming first.

Reported by Chris Marusich <cmmarusich@gmail.com>.

* guix/store.scm (%default-substitute-urls): Prepend
"mirror.hydra.gnu.org."
 2016-03-28 22:25:42 +02:00
Ludovic Courtès efa77c6c92 doc: Explain why the config file should be stored on the target. 
Suggested by Chris Marusich <cmmarusich@gmail.com>.

* doc/guix.texi (Proceeding with the Installation): Explain why the
config file should be on the target file system.
 2016-03-28 22:25:42 +02:00
Ludovic Courtès 15650ac2a0 doc: Suggest 'dhclient -v'. 
Suggested by Chris Marusich <cmmarusich@gmail.com>.

* doc/guix.texi (Preparing for Installation): Add "-v" for dhclient.
 2016-03-28 22:25:42 +02:00