17c3a50dfd
gnu: ghc-asn1-types: Update to 0.3.2.
...
* gnu/packages/haskell-crypto.scm (ghc-asn1-types): Update to 0.3.2.
2017-12-01 16:08:58 +01:00
c24bfc3d2c
gnu: ghc-asn1-encoding: Update to 0.9.5.
...
* gnu/packages/haskell-crypto.scm (ghc-asn1-encoding): Update to 0.9.5.
2017-12-01 16:08:58 +01:00
92cd94648c
gnu: ghc-array: Update to 0.5.2.0.
...
* gnu/packages/haskell.scm (ghc-array): Update to 0.5.2.0.
2017-12-01 16:08:58 +01:00
1a1cf03f24
gnu: ghc-aeson-qq: Update to 0.8.2.
...
* gnu/packages/haskell-web.scm (ghc-aeson-qq): Update to 0.8.2.
2017-12-01 16:08:58 +01:00
f4548394d4
gnu: java: Fix several synopses & descriptions.
...
* gnu/packages/java.scm (java-plexus-classworlds)[description]: Fix typo and
use @code.
(java-plexus-container-default-bootstrap)[synopsis]: Hyphenate for clarity,
as done in the description.
[description]: Fix typo and use @dfn.
(java-jmh)[description]: Fix typo.
(java-xerial-core)[synopsis, description]: Fix typos.
2017-12-01 16:08:57 +01:00
c7ffbfe9f9
gnu: guile: Add version 2.2.3.
...
* gnu/packages/guile.scm (guile-2.2.3): New variable.
2017-12-01 16:00:15 +01:00
8ad4f0aa31
gnu: gnome-default-applications: Add Evince for PDF and PS.
...
* gnu/packages/gnome.scm (gnome-default-applications)[propagated-inputs]:
Add EVINCE.
[arguments]: Associate Evince with application/pdf and
application/postscript.
2017-12-01 16:00:14 +01:00
4afc903a8c
services: xorg: Add 'font-misc-misc' to the default font set.
...
Fixes <https://bugs.gnu.org/24279 >.
Reported by John Darrington <john@darrington.wattle.id.au>.
* gnu/services/xorg.scm (%default-xorg-fonts): Add FONT-MISC-MISC.
2017-12-01 16:00:14 +01:00
e261e27676
guix system: 'init' displays a progress bar while copying.
...
Until now it would print the name of each store item being copied, which
was verbose and unhelpful.
* guix/scripts/system.scm (copy-closure): Use 'progress-reporter/bar'
and 'call-with-progress-reporter'.
(guix-system): Parameterize 'current-terminal-columns'.
2017-12-01 16:00:14 +01:00
e4ecd51e23
guix system: Simplify closure copy.
...
* guix/scripts/system.scm (copy-item): Add 'references' argument and
remove 'references*' call. Turn into a non-monadic procedure.
(copy-closure): Remove initial call to 'references*'. Only pass ITEM to
'topologically-sorted*' since that's equivalent. Compute the list of
references corresponding to TO-COPY and pass it to 'copy-item'.
2017-12-01 16:00:14 +01:00
1fafa2f587
weather: Use (guix progress) for progress report.
...
* guix/progress.scm (start-progress-reporter!, stop-progress-reporter!)
(progress-reporter-report!): New procedures.
* guix/scripts/weather.scm (call-with-progress-reporter): New procedure.
(package-outputs)[update-progress!]: Remove.
Use 'call-with-progress-reporter' instead.
(guix-weather): Parameterize 'current-terminal-columns'.
2017-12-01 16:00:14 +01:00
4cdb27af48
progress: Add 'progress-reporter/bar'.
...
* guix/progress.scm (progress-reporter/bar): New procedure.
2017-12-01 16:00:14 +01:00
5ed534ccc3
progress: 'progress-bar' accounts for brackets.
...
* guix/progress.scm (progress-bar): Subtract 2 to BAR-WIDTH to account
for brackets.
2017-12-01 16:00:14 +01:00
1252dd325b
progress: Factorize erase-in-line.
...
* guix/progress.scm (erase-in-line): New procedure.
(progress-reporter/file): Use it.
2017-12-01 16:00:14 +01:00
e695d79dc6
gnu: ghc-edisoncore: Fix typo in synopsis.
...
* gnu/packages/haskell.scm (ghc-edisoncore)[synopsis]: Fix typo.
2017-12-01 15:03:13 +01:00
fb5569b0c8
gnu: man-pages: Update to 4.14.
...
* gnu/packages/man.scm (man-pages): Update to 4.14.
2017-12-01 15:03:12 +01:00
00e39b2ea4
system: vm: Do not add EFI partition on ARM system.
...
* gnu/system/vm.scm (qemu-img): Do not add EFI partition if we are targetting
ARM.
UEFI support on u-boot is still experimental, so do not add EFI partition on
ARM for now.
2017-12-01 13:55:49 +01:00
e45b573c2d
utils: Add target-arm32? procedure.
...
* guix/utils.scm (target-arm32?): New exported procedure.
2017-12-01 13:55:45 +01:00
f1de0e37d5
gnu: openfoam: Clean up to reduce closure.
...
This saves ~1GB.
* gnu/packages/simulation.scm (openfoam)[outputs]: Add debug.
[arguments]: Clean up .o and src after build.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-01 11:28:48 +01:00
6101cad4d1
gnu: Add geomyidae.
...
* gnu/packages/web.scm (geomyidae): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-01 11:28:48 +01:00
491cbd3553
gnu: Add emacs-evil-matchit.
...
* gnu/packages/emacs.scm (emacs-evil-matchit): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-01 11:28:48 +01:00
c03ba83c17
gnu: git: Run tests sequentially.
...
Fixes <https://bugs.gnu.org/29512 >.
Reported by George myglc2 Clemmer <myglc2@gmail.com>.
* gnu/packages/version-control.scm (git)[arguments]: Add
#:parallel-tests?.
2017-12-01 11:28:48 +01:00
f8446df663
gnu: elogind: Remove "uaccess" tag usage in "seat-late" rules.
...
* gnu/packages/freedesktop.scm (elogind)[arguments]: Add
'remove-uaccess-tag' phase.
2017-12-01 11:28:48 +01:00
1776d5cd18
gnu: linux-libre: Update to 4.14.3.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.3.
(%linux-libre-hash): Update hash.
2017-12-01 01:37:08 -05:00
6850c9ced5
gnu: linux-libre@4.9: Update to 4.9.66.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.66.
2017-12-01 01:36:21 -05:00
8b8600022c
gnu: linux-libre@4.4: Update to 4.4.103.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.103.
2017-12-01 01:35:44 -05:00
9ce07f2dba
doc: Update the example VCS snapshot package definition.
...
In commit ee17a9e06e
2017-11-30 12:19:29 -05:00
34a28c13f5
gnu: qemu: Enable seccomp support.
...
* gnu/packages/virtualization.scm (qemu)[inputs]: Add libseccomp.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-30 18:14:57 +01:00
e33904336f
gnu: fish-guix: Update to 0.1.2.1.
...
* gnu/packages/shells.scm (fish-guix): Update to 0.1.2.1.
(license): Switch to bsd-3.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-30 18:14:57 +01:00
f00515b483
vm: Filter out file systems that refer to UUIDs or labels.
...
* gnu/system/vm.scm (virtualized-operating-system)[user-file-systems]:
Filter out things that refer to file system UUIDs or labels.
2017-11-30 18:14:57 +01:00
1d0865c19a
gnu: monero-core: Fix missing dependency.
...
* gnu/packages/finance.scm (monero-core)[inputs]: Add readline.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-30 18:14:57 +01:00
1d752e4345
gnu: Add xautolock.
...
* gnu/packages/xdisorg.scm (xautolock): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-30 18:14:56 +01:00
e42f026eb5
ui: Present 'use-modules' hints with a question mark.
...
Suggested by myglc2 <myglc2@gmail.com>.
* guix/ui.scm (report-load-error): Write "Did you forget" rather than
"Try adding."
2017-11-30 18:14:56 +01:00
117d8cc40e
gnu: jellyfish: Update to 2.2.7.
...
* gnu/packages/bioinformatics.scm (jellyfish): Update to 2.2.7.
[native-inputs]: Add pkg-config.
[inputs]: Add htslib.
2017-11-30 17:38:36 +01:00
f1b90a2b58
gnu: r-bigmemory: Update to 4.5.31.
...
* gnu/packages/statistics.scm (r-bigmemory): Update to 4.5.31.
[propagated-inputs]: Remove r-r-utils.
2017-11-30 17:28:27 +01:00
b50a4b1391
gnu: r-cowplot: Update to 0.9.1.
...
* gnu/packages/statistics.scm (r-cowplot): Update to 0.9.1.
[propagated-inputs]: Add r-scales.
2017-11-30 17:28:27 +01:00
a3ae2fa537
gnu: r-rcppprogress: Update to 0.4.
...
* gnu/packages/statistics.scm (r-rcppprogress): Update to 0.4.
[propagated-inputs]: Add r-devtools.
2017-11-30 17:28:26 +01:00
0382d37734
gnu: r-rmarkdown: Update to 1.8.
...
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.8.
[propagated-inputs]: Remove r-catools; add r-mime and r-stringr.
2017-11-30 17:28:26 +01:00
e35cac9581
gnu: r-batchjobs: Update to 1.7.
...
* gnu/packages/statistics.scm (r-batchjobs): Update to 1.7.
[propagated-inputs]: Add r-backports, r-data-table, and r-stringi; remove
r-fail and r-stringr.
2017-11-30 17:28:25 +01:00
05fd8e6b46
gnu: r-pracma: Update to 2.1.1.
...
* gnu/packages/maths.scm (r-pracma): Update to 2.1.1.
2017-11-30 17:28:24 +01:00
9b8d02011f
gnu: r-annotationhub: Update to 2.10.1.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.10.1.
2017-11-30 17:28:24 +01:00
87e91a9fff
gnu: r-msnid: Update to 1.12.1.
...
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.12.1.
2017-11-30 17:28:23 +01:00
439492654b
gnu: r-maldiquant: Update to 1.17.
...
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.17.
2017-11-30 17:28:23 +01:00
06e8e0fc6c
gnu: r-genomicalignments: Update to 1.14.1.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.14.1.
2017-11-30 17:28:22 +01:00
1ce5d32b49
gnu: r-limma: Update to 3.34.2.
...
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.34.2.
2017-11-30 17:28:22 +01:00
8131cf4162
gnu: r-variantannotation: Update to 1.24.2.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.24.2.
2017-11-30 17:28:21 +01:00
d2081a17ed
gnu: r-getopt: Update to 1.20.1.
...
* gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.1.
2017-11-30 17:28:20 +01:00
4220ab0c81
gnu: r-gseabase: Update to 1.40.1.
...
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.40.1.
2017-11-30 17:28:20 +01:00
d259932ca8
gnu: r-dexseq: Update to 1.24.1.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.1.
2017-11-30 17:28:19 +01:00
058644c0f2
gnu: r-deseq2: Update to 1.18.1.
...
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.18.1.
2017-11-30 17:28:18 +01:00
Tobias Geerinckx-Rice