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16329 Commits

Author SHA1 Message Date
Mark H Weaver 3b6f8b579b
gnu: python-parse: Fix patch file name in gnu/local.mk. 
This is a followup to commit aa6c09ed71.

* gnu/local.mk (dist_patch_DATA):
"python-python-parse-too-many-fields.patch" =>
"python-parse-too-many-fields.patch".
 2016-10-27 20:31:19 -04:00
Mark H Weaver 3d82676919
Merge branch 'master' into core-updates 2016-10-27 20:21:26 -04:00
Efraim Flashner f9a65318dd
gnu: python-parse: Use 'modify-phases' syntax. 
* gnu/packages/python.scm (python-parse)[arguments]: Use 'modify-phases'
syntax.
 2016-10-27 23:29:56 +03:00
Efraim Flashner aa6c09ed71
gnu: python-parse: Fix failing test. 
* gnu/packages/python.scm (python-parse)[origin]: Add patch.
* gnu/packages/patches/python-parse-too-many-fields.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-10-27 23:28:07 +03:00
Efraim Flashner d18c69aa2a
gnu: python-pytest-django: Add missing test input. 
* gnu/packages/django.scm (python-pytest-django)[native-inputs]: Add
python-django.
 2016-10-27 22:27:31 +03:00
Efraim Flashner fa7cd33378
gnu: python-django-filter: Add inputs for tests. 
* gnu/packages/django.scm (python-django-filter)[native-inputs]: Add
python-django, python-mock.
 2016-10-27 22:18:30 +03:00
Efraim Flashner 13c4d8746b
gnu: python-wtforms: Skip optional tests. 
* gnu/packages/python.scm (python-wtforms)[arguments]: Add a phase
preventing tests from failing when optional tests aren't run.
 2016-10-27 22:13:22 +03:00
Efraim Flashner b6e0804953
gnu: lightning: Add missing input. 
* gnu/packages/assembly.scm (lightning)[native-inputs]: Add zlib.
 2016-10-27 21:13:05 +03:00
Roel Janssen 7500e42b3e
gnu: Add r-mutationalpatterns. 
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): New variable.
 2016-10-27 20:07:05 +02:00
Efraim Flashner 377bfbc1f8
gnu: gxmessage: Add missing input. 
* gnu/packages/gxmessage.scm (gxmessage)[native-inputs]: Add gtk+3-bin.
 2016-10-27 21:03:08 +03:00
Efraim Flashner 327be74720
gnu: jasper: Updat eto 1.900.16. 
* gnu/packages/image.scm (japer): Update to 1.900.16.
 2016-10-27 20:14:17 +03:00
Kei Kebreau 233fbb6102
gnu: windowmaker: Add support for more image formats. 
* gnu/packages/gnustep.scm (windowmaker)[inputs]: Add giflib, libpng,
and libtiff.
 2016-10-27 10:51:05 -04:00
Roel Janssen b5ce25cc0e
gnu: r: Use uname from Guix 
* gnu/packages/statistics.scm (r): Use uname from Guix.
 2016-10-27 16:37:24 +02:00
Marius Bakke 6178274d19
gnu: python-urllib3: Update to 1.18.1. 
* gnu/packages/python.scm (python-urllib3): Update to 1.18.1.
[home-page]: Use https URL.
 2016-10-27 14:03:07 +01:00
Ludovic Courtès 245cc5f5d5
tests: Test installation with a RAID root partition. 
* gnu/tests/install.scm (%raid-root-os, %raid-root-os-source)
(%raid-root-installation-script, %test-raid-root-os): New variables.
 2016-10-27 13:48:52 +02:00
Ludovic Courtès 49baaff4d2
file-systems: 'disk-partitions' detected partitions from mapped devices. 
Previously, partitions of mdadm- or cryptsetup-produced block devices
would not be returned by 'disk-partitions'.

* gnu/build/file-systems.scm (disk-partitions)[last-character]: New
procedure.
[partition?]: Add 'name' parameter and rewrite.  Adjust caller.
* gnu/build/file-systems.scm (ENOENT-safe): Silently ignore ENOMEDIUM.
 2016-10-27 13:48:52 +02:00
Ludovic Courtès b800b8da21
tests: Add #:memory-size parameter for the command to run the installed OS. 
* gnu/tests/install.scm (qemu-command/writable-image): Add #:memory-size
parameter and honor it.
 2016-10-27 13:48:52 +02:00
Ludovic Courtès 4ed2f515d6
mapped-devices: Use 'mdadm-static' in 'raid-device-mapping'. 
* gnu/system/mapped-devices.scm (open-raid-device, close-raid-device):
Use MDADM-STATIC instead of MDADM.  Use 'file-append'.
 2016-10-27 13:48:52 +02:00
Ludovic Courtès 631fda7e90
gnu: Add mdadm-static. 
* gnu/packages/linux.scm (mdadm-static): New variable.
 2016-10-27 13:48:52 +02:00
Efraim Flashner 7d876afdd8
gnu: libmikmod: Update to 3.3.10. 
* gnu/packages/sdl.scm (libmikmod): Update to 3.3.10.
 2016-10-27 12:23:04 +03:00
Efraim Flashner 355d8e873b
gnu: sdl2: Update to 2.0.5. 
* gnu/packages/sdl.scm (sdl2): Update to 2.0.5.
 2016-10-27 12:23:04 +03:00
Efraim Flashner 5d5790ce44
gnu: Use 'https' for libsdl urls. 
* gnu/packages/sdl.scm (sdl, sdl2, sdl-image, sdl-mixer, sdl-net)
(sdl-ttf, sdl2-image, sdl2-ttf)[source]: Use https.
[home-page]: Use https.
 2016-10-27 12:23:03 +03:00
Tobias Geerinckx-Rice 483b7ce7ae
gnu: mcelog: Update to 144. 
* gnu/packages/linux.scm (mcelog): Update to 144.
 2016-10-27 11:03:34 +02:00
Tobias Geerinckx-Rice 6270769dc2
gnu: btrfs-progs: Update to 4.8.2. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.2.
 2016-10-27 11:03:34 +02:00
Mike Gerwitz cd9ed6c1cb
gnu: gnupg: Add support for pcsc-lite. 
* gnu/packages/gnupg.scm (gnupg)[inputs]: Add pcsc-lite.
[arguments]: Rename phase 'patch-config-files' to 'patch-paths'.  Patch
`scd/scdaemon.c' with absolute path of libpcsclite.so.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-10-27 09:56:54 +01:00
Mike Gerwitz a6b256affc
gnu: Add pcsc-lite. 
* gnu/packages/security-token.scm (pcsc-lite): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-10-27 09:56:52 +01:00
ng0 8888fe826c
gnu: Add dbacl. 
* gnu/packages/textutils.scm (dbacl): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-10-27 11:42:39 +03:00
Efraim Flashner 5fd84e288c
gnu: valgrind: Use 'modify-phases' syntax. 
* gnu/packages/valgrind.scm (valgrind)[arguments]: Use 'modify-phases'
syntax.
 2016-10-27 11:42:38 +03:00
Efraim Flashner e68168eb87
gnu: valgrind: Update to 3.12.0. 
* gnu/packages/valgrind.scm (valgrind): Update to 3.12.0.
 2016-10-27 11:42:29 +03:00
Hartmut Goebel 49a531f545
gnu: python-pathlib2: Add comment. 
As suggested by Efraim Flashner.

* gnu/packages/python.scm (python-pathlib2): Add comment.
 2016-10-27 10:09:10 +02:00
Leo Famulari f02fb6dd6b
gnu: btrfs-progs: Update to 4.8.2. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.2.
 2016-10-27 00:43:37 -04:00
Leo Famulari 9045c086df
gnu: blender: Update to 2.78a. 
* gnu/packages/graphics.scm (blender): Update to 2.78a.
 2016-10-27 00:30:47 -04:00
Leo Famulari fad8bf977d
gnu: python-s3transfer: Run the tests. 
* gnu/packages/python.scm (python-s3transfer, python2-s3transfer)[arguments]:
Use python-nose to run the tests.
[native-inputs]: Add python-mock and python-nose.
 2016-10-26 21:41:28 -04:00
Leo Famulari 522fc32ebd
gnu: shotwell: Update to 0.25.0. 
* gnu/packages/gnome.scm (shotwell): Update to 0.25.0.
[inputs]: Add gcr.
 2016-10-26 20:10:05 -04:00
Leo Famulari 30b1267830
gnu: vdirsyncer: Update to 0.14.0. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.14.0.
 2016-10-26 19:56:15 -04:00
Ludovic Courtès 5479aa2b7c
tests: Test installation with store on a separate partition. 
This is a followup to 0f65f54ebd.

* gnu/tests/install.scm (%separate-store-os, %separate-store-os-source)
(%separate-store-installation-script, %test-separate-store-os): New
variables.
 2016-10-27 01:00:42 +02:00
Ludovic Courtès d88767a399
tests: Use #:fallback? #t when building system tests. 
* build-aux/run-system-tests.scm (run-system-tests): Pass #:fallback? #t
to 'set-build-options*'.
 2016-10-27 01:00:41 +02:00
Ludovic Courtès d6aca5835a
tests: Adjust pypi test to recent importer change. 
This is a followup to b5c347ad3d.

* tests/pypi.scm ("pypi->guix-package"): Expect 'propagated-inputs', not
'inputs'.
("pypi->guix-package, wheels"): Likewise.
 2016-10-27 01:00:41 +02:00
Ludovic Courtès a91d75ecbd
tests: Skip 'pivot-root' test on Linux > 4.7.5. 
* tests/syscalls.scm ("pivot-root"): Skip when 'uname' returns a
'utsname:release' > 4.7.5.
 2016-10-27 01:00:41 +02:00
Leo Famulari 02c73adcdf
Merge branch 'master' into core-updates 2016-10-26 19:00:06 -04:00
Leo Famulari a19da40630
gnu: perl-www-curl: Fix build failure. 
* gnu/packages/patches/perl-www-curl-remove-symbol.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/web.scm (perl-www-curl)[source]: Use it.
 2016-10-26 18:44:16 -04:00
ng0 5d73e30000
gnu: Add lci. 
* gnu/packages/lolcode.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-10-26 20:39:27 +03:00
Christopher Allan Webber 8caeb11772
gnu: Add autossh. 
* gnu/packages/ssh.scm (autossh): New variable.
 2016-10-26 11:22:17 -05:00
Ricardo Wurmus aba6463975
gnu: r: Update to 3.3.1. 
* gnu/packages/statistics.scm (r): Update to 3.3.1.
 2016-10-26 18:14:17 +02:00
Ricardo Wurmus a8e893b0b8
gnu: r-matrixstats: Update to 0.51.0. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.51.0.
 2016-10-26 16:23:32 +02:00
Ricardo Wurmus fd54f65e72
gnu: r-r-utils: Update to 2.4.0. 
* gnu/packages/statistics.scm (r-r-utils): Update to 2.4.0.
 2016-10-26 16:23:32 +02:00
Ricardo Wurmus 89242ea47f
gnu: r-irlba: Update to 2.1.2. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.1.2.
 2016-10-26 16:23:31 +02:00
Ricardo Wurmus 4f2ebc16ce
gnu: r-codetools: Update to 0.2-15. 
* gnu/packages/statistics.scm (r-codetools): Update to 0.2-15.
 2016-10-26 16:23:31 +02:00
Ricardo Wurmus cf738e961e
gnu: r-snow: Update to 0.4-2. 
* gnu/packages/statistics.scm (r-snow): Update to 0.4-2.
 2016-10-26 16:23:31 +02:00
Ricardo Wurmus 41bc22a7de
gnu: r-backports: Update to 1.0.4. 
* gnu/packages/statistics.scm (r-backports): Update to 1.0.4.
 2016-10-26 16:23:30 +02:00