a35a1e9c13
gnu: r-genomicranges: Update to 1.28.4.
...
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.28.4.
2017-07-22 17:22:07 +02:00
aa51da7eef
gnu: Remove python-fake-factory leftovers.
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This is a followup to c799eb2eb8
2017-07-22 15:07:45 +02:00
c799eb2eb8
gnu: Remove python-fake-factory.
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Superseded by python-faker since ce7911ddae
2017-07-22 14:31:28 +02:00
2580c2f07f
gnu: python-pyopenssl: Update to 17.2.0.
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* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0.
[native-inputs]: Add PYTHON-FLAKY.
[source](patches): Remove.
2017-07-22 14:31:28 +02:00
4e52739c61
gnu: Add python-flaky.
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* gnu/packages/python.scm (python-flaky, python2-flaky): New variables.
2017-07-22 14:31:27 +02:00
6027cb8a82
gnu: maim: Update to 5.4.64.
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* gnu/packages/xdisorg.scm (maim): Update to 5.4.64.
2017-07-22 14:31:27 +02:00
eb2b5f9d03
gnu: slop: Update to 6.3.47.
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* gnu/packages/xdisorg.scm (slop): Update to 6.3.47.
[inputs]: Add GLEW.
2017-07-22 14:31:27 +02:00
0cd95cefe0
gnu: parallel: Update to 20170722.
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* gnu/packages/parallel.scm (parallel): Update to 20170722.
2017-07-22 13:47:26 +02:00
bc35c9d318
gnu: font-gnu-unifont: Update to 10.0.05.
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* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.05.
2017-07-22 13:47:26 +02:00
f7975a3bde
gnu: nano: Update to 2.8.6.
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* gnu/packages/nano.scm (nano): Update to 2.8.6.
2017-07-22 13:47:25 +02:00
f03d8d67a5
gnu: acct: Update to 6.6.4.
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* gnu/packages/acct.scm (acct): Update to 6.6.4.
2017-07-22 13:47:25 +02:00
84fcb58050
gnu: Add conda.
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* gnu/packages/package-management.scm (conda): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:30 +02:00
4bc08b6e79
gnu: Add python-conda.
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* gnu/packages/package-management.scm (python-conda, python2-conda): New
variables.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:29 +02:00
513d35f191
gnu: Add python-anaconda-client.
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* gnu/packages/package-management.scm (python-anaconda-client,
python2-anaconda-client): New variables.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:29 +02:00
1f84ff5135
gnu: Add python-clyent.
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* gnu/packages/python.scm (python-clyent, python2-clyent): New variables.
2017-07-22 12:26:29 +02:00
3fee003950
gnu: Update python-pytz to 2017.2.
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* gnu/packages/python.scm (python-pytz, python2-pytz): Update to 2017.2.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:29 +02:00
de469015c4
gnu: man-pages: Update to 4.12.
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* gnu/packages/man.scm (man-pages): Update to 4.12.
2017-07-22 12:18:58 +02:00
1ffe41711b
gnu: tint2: Update to 0.14.6.
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* gnu/packages/xdisorg.scm (tint2): Update to 0.14.6.
2017-07-21 22:41:24 -05:00
e9185cbac6
gnu: icedtea@3: Update to 3.5.0 [security fixes].
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Fixes CVE-2017-{10053,10067,10074,10074,10078,10081,10087,10089,10090,10096,
10101,10102,10107,10108,10109,10110,10111,10115,10116,10118,10135,10176,10193,
10198}.
* gnu/packages/java.scm (icedtea-8): Update to 3.5.0.
2017-07-21 17:30:08 -04:00
c800fd564b
services: cuirass: Add fallback parameter.
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* gnu/services/cuirass.scm (<cuirass-configuration>)[fallback?]: New field.
(cuirass-shepherd-service): Take it into account.
* doc/guix.texi (Continuous Integration): Document it.
2017-07-21 21:46:47 +02:00
3c14378381
gnu: vim: Update to 8.0.0727 [fixes CVE-2017-11109].
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* gnu/packages/vim.scm (vim): Update to 8.0.0727.
(vim-full)[source]: Add field and hold back at version 8.0.0600.
2017-07-21 15:20:23 -04:00
6f226c078c
gnu: mysql: Update to 5.7.19.
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* gnu/packages/databases.scm (mysql): Update to 5.7.19.
2017-07-21 14:50:24 -04:00
c95644f017
publish: Make the cache eviction policy less aggressive.
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Suggested by Mark H Weaver <mhw@netris.org>.
* guix/scripts/publish.scm (nar-expiration-time): New procedure.
(render-narinfo/cached): Use it as the #:entry-expiration passed to
'maybe-remove-expired-cache-entries'.
2017-07-21 17:03:25 +02:00
deac674ab4
publish: Avoid 'valid-path?' RPC for non-existent items.
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* guix/scripts/publish.scm (render-narinfo/cached): Call 'file-exists?'
before calling 'valid-path?'. This makes the 404 path slightly faster.
2017-07-21 17:03:25 +02:00
35eb77b09d
store: Rewrite 'store-path-hash-part' to not use regexps.
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* guix/store.scm (store-path-hash-part): Rewrite without using a
regexp. This speeds up 'guix substitute'.
2017-07-21 17:03:25 +02:00
33463986ba
publish: Remove 'regexp-exec' call from the hot path.
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* guix/scripts/publish.scm (extract-narinfo-hash): Rewrite without
resorting to regexps.
2017-07-21 17:03:24 +02:00
0a94dc6396
base32: Export the base32 charsets.
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* guix/base32.scm (%nix-base32-charset, %rfc4648-base32-charset): New
variables.
2017-07-21 17:03:24 +02:00
75a4d86f50
substitute: Avoid repeated calls to 'length'.
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* guix/scripts/substitute.scm (fetch-narinfos)[update-progress!]: Move
'length' call outside of lambda.
2017-07-21 17:03:24 +02:00
3d3e93b3f9
substitute: Optimize hash-part-to-path conversion on non-200 responses.
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Previously this operation was linear in the number of requests and
involved costly calls to 'string-contains'.
* guix/scripts/substitute.scm (fetch-narinfos)[hash-part->path]: New
procedure.
[handle-narinfo-response]: Use it for caching when CODE is not 200.
2017-07-21 17:03:24 +02:00
0cf9f9b1e3
gnu: libpsl: Update to 0.18.0.
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* gnu/packages/web.scm (libpsl): Update to 0.18.0.
[native-inputs]: Add pkg-config.
[inputs]: Replace icu4c with libidn2; add libunistring.
2017-07-21 12:24:47 +02:00
cd4f35c379
gnu: borg: Update to 1.0.11.
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* gnu/packages/backup.scm (borg): Update to 1.0.11.
2017-07-21 01:23:25 -04:00
f8fabfc99f
gnu: bitcoin-core: Actually build the graphical client.
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* gnu/packages/finance.scm (bitcoin-core)[inputs]: Replace qtbase with qt.
2017-07-20 18:42:28 -04:00
81c35029d4
gnu: heimdal: Fix CVE-2017-{6594,11103}.
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* gnu/packages/patches/heimdal-CVE-2017-6594.patch,
gnu/packages/patches/heimdal-CVE-2017-11103.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/kerberos.scm (heimdal)[source]: Use them.
2017-07-20 15:33:53 -04:00
cfd6a3b1ee
gnu: Add bmon.
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* gnu/packages/networking.scm (bmon): New variable.
2017-07-20 23:19:24 +05:30
dbfcadfc30
doc: Show the "git clone" command.
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Suggested by Joshua Branson <jbranso91@gmail.com>.
* doc/contributing.texi (Building from Git): Add "git clone" command.
2017-07-20 18:08:00 +02:00
302d46e63f
gexp: Slightly improve error reporting for 'local-file'.
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Reported by Ricardo Wurmus.
* guix/gexp.scm (local-file): Define using 'syntax-case' instead of
'syntax-rules'. Explicitly handle the zero-argument case and the
use-as-an-identifier case.
2017-07-20 18:08:00 +02:00
fb5dfa86b1
gnu: texlive-latex-mdwtools: Fix syntax error in description.
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* gnu/packages/tex.scm (texlive-latex-mdwtools)[description]: Fix texinfo
syntax error.
2017-07-20 16:40:29 +02:00
09acbb02c7
gnu: texlive-latex-environ: Fix invalid texinfo markup.
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* gnu/packages/tex.scm (texlive-latex-environ)[description]: Fix texinfo
syntax errors.
2017-07-20 16:36:31 +02:00
0daa1d646a
gnu: Add mksh.
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* gnu/packages/shells.scm (mksh): New variable.
2017-07-20 19:55:22 +05:30
41209a6f3a
licenses: Add MirOS license.
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* guix/licenses.scm (miros): New variable.
2017-07-20 19:55:21 +05:30
561f4e4500
guix package: '-l' correctly handles zero-generation profiles.
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* guix/scripts/package.scm (process-query) <'list-generations>: Properly
handle the case where 'profile-generations' returns the empty list.
2017-07-20 15:29:15 +02:00
edbe07cd67
guix package: Trim trailing slashes from the profile name.
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Fixes <https://bugs.gnu.org/25762 >.
Reported by Ricardo Wurmus <rekado@elephly.net>.
* guix/scripts/package.scm (canonicalize-profile): Trim trailing slashes
from PROFILE.
2017-07-20 15:29:15 +02:00
457103b90b
doc: Discuss when to run a GC.
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* doc/guix.texi (Invoking guix gc): Add a paragraph on when to run a GC.
2017-07-20 15:29:15 +02:00
8582e03ae5
gnu: Remove a left-over patch.
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This is a followup to commit 426b0b898f
2017-07-20 09:00:36 -04:00
426b0b898f
gnu: pcre: Update replacement to 8.41 [fixes CVE-2017-{7244,7245,7246}].
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* gnu/packages/pcre.scm (pcre)[replacement]: Update to pcre-8.41.
(pcre/fixed): Replace with ...
(pcre-8.41): ... new variable.
2017-07-20 08:26:40 -04:00
da03649640
profiles: Remove workaround for an old Guile 'scandir' bug.
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* guix/profiles.scm (generation-numbers)[scandir]: Remove.
2017-07-20 11:57:13 +02:00
8b113790fa
tests: Use 'virtual-machine' records instead of monadic procedures.
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* gnu/tests/base.scm (%test-basic-os): Use 'let*' instead of 'mlet*' and
'virtual-machine' instead of 'system-qemu-image/shared-store-script'.
(run-mcron-test): Likewise.
(run-nss-mdns-test): Likewise.
* gnu/tests/dict.scm (run-dicod-test): Likewise.
* gnu/tests/mail.scm (run-opensmtpd-test): Likewise.
(run-exim-test): Likewise.
* gnu/tests/messaging.scm (run-xmpp-test): Likewise.
* gnu/tests/networking.scm (run-inetd-test): Likewise.
* gnu/tests/nfs.scm (run-nfs-test): Likewise.
* gnu/tests/ssh.scm (run-ssh-test): Likewise.
* gnu/tests/web.scm (run-nginx-test): Likewise.
2017-07-20 11:57:13 +02:00
ed419fa0c5
vm: Add a <virtual-machine> type and associated gexp compiler.
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* gnu/system/vm.scm (system-qemu-image/shared-store-script): Add
#:options parameter and honor it.
(<virtual-machine>): New record type.
(virtual-machine): New macro.
(port-forwardings->qemu-options, virtual-machine-compiler): New
procedures.
2017-07-20 11:57:13 +02:00
c97cef0a91
gnu: Add premake4.
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* gnu/packages/build-tools.scm (premake4): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20 11:57:13 +02:00
742242a5be
gnu: Add java-commons-cli@1.2.
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* gnu/packages/java.scm(java-commons-cli-1.2): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20 11:57:12 +02:00
Ricardo Wurmus