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Author SHA1 Message Date
Efraim Flashner 21565719e5 gnu: claws-mail: Update to 3.13.2. 
* gnu/packages/mail.scm (claws-mail): Update to 3.13.2.
 2016-01-23 20:13:31 +02:00
Ricardo Wurmus 3a40a92c73 gnu: Add cufflinks. 
* gnu/packages/bioinformatics.scm (cufflinks): New variable.
 2016-01-23 09:15:11 +01:00
Ricardo Wurmus 94ce537eac gnu: Add TopHat. 
* gnu/packages/bioinformatics.scm (tophat): New variable.
* gnu/packages/patches/tophat-build-with-later-seqan.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2016-01-23 08:53:10 +01:00
Ricardo Wurmus 3062d750b4 gnu: star: Update to 2.5.1b. 
* gnu/packages/bioinformatics.scm (star): Update to 2.5.1b.
[source]: Remove bundled htslib sources and pre-built binaries.
[arguments]: Add phase "do-not-use-bundled-htslib".
[inputs]: Add "htslib".
 2016-01-23 08:40:14 +01:00
Ricardo Wurmus c0266e8d03 gnu: star: Use "modify-phases" syntax. 
* gnu/packages/bioinformatics.scm (star)[arguments]: Use "modify-phases"
  syntax.
 2016-01-23 08:40:14 +01:00
Efraim Flashner ebf89f134c gnu: fuse: Update to 2.9.5 [fixes CVE-2016-1233]. 
* gnu/packages/linux.scm (fuse): Update to 2.9.5.
 2016-01-22 09:00:34 +02:00
Eric Bavier b6d937d99e gnu: american-fuzzy-lop: Update to 1.96b. 
* gnu/packages/debug.scm (american-fuzzy-lop): Update to 1.96b.
  [arguments]: Create symbolic link to custom qemu, rather than copying.
 2016-01-21 23:54:48 -06:00
Eric Bavier 2d8211ab30 gnu: american-fuzzy-lop: Fix qemu configure flags. 
Fixes regression introduced in 06da1a6.

* gnu/packages/debug.scm (american-fuzzy-lop)[qemu]: Override inherited
  #:configure-flags.
 2016-01-21 23:54:48 -06:00
Leo Famulari 765973cd65 gnu: Add iftop. 
* gnu/packages/admin.scm (iftop): New variable.
 2016-01-21 20:21:19 -05:00
Leo Famulari c2af02602a Revert "gnu: Add iftop." 
This reverts commit 45da8c6dd1.
 2016-01-21 20:11:21 -05:00
Leo Famulari 45da8c6dd1 gnu: Add iftop. 
* gnu/packages/admin.scm (iftop): New variable.
 2016-01-21 18:11:12 -05:00
Ludovic Courtès 6b779207ee system: grub: Search root device by label or UUID if possible. 
Fixes <http://bugs.gnu.org/22281>.
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.

* gnu/system/grub.scm (eye-candy): Add 'root-fs' parameter.  Replace
'search --file' command in the output with whatever 'grub-root-search'
returns.
(grub-root-search): New procedure.
(grub-configuration-file): Add 'store-fs' parameter.  Use
'grub-root-search' instead of hard-coded 'search --file' commands.
* gnu/system.scm (store-file-system,
operating-system-store-file-system): New procedures.
(operating-system-grub.cfg): Use it, and adjust call to
'grub-configuration-file'.
* tests/system.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
 2016-01-22 00:02:52 +01:00
Mark H Weaver 3738d8700f gnu: ffmpeg: Update to 2.8.5. 
* gnu/packages/video.scm (ffmpeg): Update to 2.8.5.
 2016-01-21 10:30:21 -05:00
Mark H Weaver 0c0207a93b gnu: gajim: Update to 0.16.5 [fixes CVE-2015-8688]. 
* gnu/packages/messaging.scm (gajim): Update to 0.16.5.
  [arguments]: Disable tests.
 2016-01-21 10:24:44 -05:00
Ricardo Wurmus 6c92d8dd35 gnu: bind-utils: Build and install "nsupdate". 
* gnu/packages/dns.scm (bind-utils)[arguments]: Build and install
  "nsupdate" executable.
 2016-01-21 15:53:35 +01:00
Ricardo Wurmus bd0eb6672b gnu: bind-utils: Generalize "build" and "install" phases. 
* gnu/packages/dns.scm (bind-utils)[arguments]: Generalize "build" and
  "install" phases.
 2016-01-21 15:53:35 +01:00
Ricardo Wurmus b2844d8f14 gnu: bind-utils: Use "modify-phases" syntax. 
* gnu/packages/dns.scm (bind-utils): Use "modify-phases" syntax.
 2016-01-21 15:53:35 +01:00
Pjotr Prins 897092875e gnu: r-qtl: Update to 1.38-4. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.38-4.
 2016-01-21 11:16:12 +01:00
Mark H Weaver 1207a0c33e gnu: libxmp: Update to 4.3.10. 
* gnu/packages/audio.scm (libxmp): Update to 4.3.10.
 2016-01-21 00:44:46 -05:00
Eric Bavier 7ed0145712 gnu: Add NQC. 
* gnu/packages/lego.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2016-01-20 22:06:27 -06:00
Leo Famulari feb767b23c gnu: Add transmission-remote-cli. 
* gnu/packages/bittorrent.scm (transmission-remote-cli): New variable.
 2016-01-20 20:19:46 -05:00
Ludovic Courtès 893106cbbf services: avahi: Export service type. 
* gnu/services/avahi.scm: Export 'avahi-service-type'.
 2016-01-21 00:22:34 +01:00
Mark H Weaver 80b64ee2d8 gnu: isc-dhcp: Update bundled bind to 9.9.8-P3 [fixes CVE-2015-8704]. 
* gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.8-P3.
 2016-01-20 14:58:40 -05:00
Mark H Weaver d912db5bc0 gnu: bind-utils: Update to 9.10.3-P3 [fixes CVE-2015-8704]. 
* gnu/packages/dns.scm (bind-utils): Update to 9.10.3-P3.
 2016-01-20 14:57:06 -05:00
Mark H Weaver beed3af565 gnu: linux-libre: Add fix for CVE-2016-0728. 
* gnu/packages/patches/linux-libre-CVE-2016-0728.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (linux-libre)[source]: Add patch.
 2016-01-20 13:23:42 -05:00
David Thompson d4df203292 gnu: obs: Add support for webcams. 
* gnu/packages/video.scm (obs)[inputs]: Add v4l-utils.
 2016-01-20 11:46:45 -05:00
David Thompson 945d985aab gnu: Add v4l-utils. 
* gnu/packages/video.scm (v4l-utils): New variable.
 2016-01-20 11:46:45 -05:00
Andreas Enge f32ee38fcd gnu: arb: Correct patch. 
* gnu/packages/patches/arb-ldconfig.patch: Correct erroneously committed file.

This is a follow-up to commit ffc8f34511.
 2016-01-20 16:57:17 +01:00
Andreas Enge ffc8f34511 gnu: arb: Update to 2.8.1. 
* gnu/packages/algebra.scm (arb)[source]: Update to 2.8.1. Add patch.
* gnu/packages/patches/arb-ldconfig.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
 2016-01-20 16:33:34 +01:00
Efraim Flashner 4c3d2b2a8f gnu: enlightenment: Update to 0.20.3. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.3.
 2016-01-20 12:37:21 +02:00
Efraim Flashner 0568dbabe0 gnu: libshout: Update to 2.4.1. 
* gnu/packages/xiph.scm (libshout): Update to 2.4.1.
 2016-01-20 02:12:23 +02:00
Efraim Flashner 1c3d37e648 gnu: opusfile: Update to 0.7. 
* gnu/packages/xiph.scm (opusfile): Update to 0.7.
 2016-01-20 02:12:23 +02:00
Efraim Flashner 275cc09280 gnu: opus: Update to 1.1.2. 
* gnu/packages/xiph.scm (opus): Update to 1.1.2.
 2016-01-20 02:12:23 +02:00
Ludovic Courtès 55ca5e8095 gnu: lilypond: Double 'max-silent-time'. 
Suggested by Mark H Weaver <mhw@netris.org>.

* gnu/packages/music.scm (lilypond)[properties]: New field.
 2016-01-19 22:14:15 +01:00
Christopher Allan Webber 16966d5b4d gnu: fdm: Adjust license link to point to web-accessible copy of command.c 
* gnu/packages/mail.scm (fdm): Adjusted license field
 2016-01-19 07:54:18 -08:00
Christopher Allan Webber 34dd26af49 gnu: Add fdm. 
* gnu/packages/mail.scm (fdm): New variable.
 2016-01-18 21:51:45 -08:00
Christopher Allan Webber 1348185ac2 gnu: Add linux-libre-4.2.5 
* gnu/packages/linux.scm (linux-libre-4.2.5): New variable.
 2016-01-18 15:10:38 -08:00
Efraim Flashner 26da7c2606 gnu: mpv: Update to 0.15.0. 
* gnu/packages/video.scm (mpv): Update to 0.15.0.
 2016-01-18 22:26:56 +02:00
Alex Kost 60edbe2297 gnu: magit: Update to 2.4.0. 
* gnu/packages/emacs.scm (magit): Update to 2.4.0.
 2016-01-18 22:40:33 +03:00
Alex Kost d44d60d211 gnu: sxiv: Update to 1.3.2. 
* gnu/packages/sxiv.scm (sxiv): Update to 1.3.2.
 2016-01-18 22:40:33 +03:00
Alex Kost 4c896c9195 gnu: manaplus: Update to 1.6.1.16. 
* gnu/packages/games.scm (manaplus): Update to 1.6.1.16.
 2016-01-18 22:40:33 +03:00
Efraim Flashner 264ae686fa python2-jsonschema: Add python2-functools32 to inputs. 
* gnu/packages/python.scm (python2-jsonschema)[inputs]: Add
python2-functools32.
(python2-wheel)[native-inputs]: Specify python2-jsonschema. Add
python2-functools32.
(python2-requests)[propagated-inputs]: Specify python2-wheel.
(python2-ipython)[inputs]: Specify python2-jsonschema, python2-requests.
(python2-rauth)[propagated-inputs]: Specify python2-requests.
* gnu/packages/openstack.scm (python2-requests-mock)[propagated-inputs]:
Specify python2-requests.
(python2-tempest-lib)[propagated-inputs]: Specify python2-jsonschema.
(python2-oslosphinx)[propagated-inputs]: Specify python2-requests.
(python2-keystoneclient)[porpagated-inputs]: Specify python2-requests.
[native-inputs]: Specify python2-oslosphinx, python2-requests-mock,
python2-tempest-lib.
(python2-swiftclient)[propagated-inputs]: Specify python2-requests,
python2-oslosphinx.
 2016-01-18 17:23:37 +02:00
Efraim Flashner 058247efff gnu: datamash: Update to 1.1.0. 
* gnu/packages/datamash.scm (datamash): Update to 1.1.0.
 2016-01-18 12:14:20 +02:00
Mark H Weaver 8047d13dcf gnu: mariadb: Update to 10.0.23. 
* gnu/packages/databases.scm (mariadb): Update to 10.0.23.
 2016-01-18 01:43:07 -05:00
Mark H Weaver 51a277d8e8 gnu: rsync: Update to 3.1.2. 
* gnu/packages/rsync.scm (rsync): Update to 3.1.2.
 2016-01-17 21:44:31 -05:00
Ricardo Wurmus e8309291a7 gnu: solfege: Build scores with Lilypond. 
* gnu/packages/music.scm (solfege)[inputs]: Add "lilypond".
 2016-01-17 22:57:58 +01:00
Ricardo Wurmus 18ef998bfc gnu: bristol: Remove SSE flags on platforms other than x86_64 and i686. 
* gnu/packages/music.scm (bristol)[arguments]: Add phase
"remove-sse-flags" to remove unsupported optimizations on platforms
other than x86_64 and i686.
 2016-01-17 22:57:58 +01:00
Ludovic Courtès b153f9f0a9 linux-initrd: Remove "usbkbd" from the default set of modules. 
Reported by Ricardo Wurmus <rekado@elephly.net>
at <http://debbugs.gnu.org/cgi/bugreport.cgi?bug=20433#39>.

* gnu/system/linux-initrd.scm (base-initrd): Remove "usbkbd".
 2016-01-17 22:01:47 +01:00
Efraim Flashner e8d2168c27 gnu: Add git-annex-remote-hubic. 
* gnu/packages/version-control.scm (git-annex-remote-hubic): New variable.
 2016-01-17 22:37:04 +02:00
Efraim Flashner c18f636823 gnu: Add python-urllib3. 
* gnu/packages/python.scm (python-urllib3, python2-urllib3): New variables.
 2016-01-17 22:37:04 +02:00