9e532ae22a
gnu: clojure: Update to 1.10.0.
...
* gnu/packages/clojure.scm (clojure): Update to 1.10.0.
[source]: Use 'git-fetch'.
2019-01-29 10:59:06 +01:00
b412ddcb1a
gnu: kitty: Update to 0.13.3.
...
* gnu/packages/terminals.scm (kitty): Update to 0.13.3.
[inputs]: Replace python2-pygments with python-pygments. Add wayland.
[arguments]: Add 'hard-code-libegl phase.
2019-01-29 10:10:06 +01:00
782f1ea9f6
utils: Switch to the new 'setvbuf' API.
...
* guix/build/utils.scm (setvbuf) [(and guile-2 (not guile-2.2))]: New
procedure.
(remove-store-references): Use the 2.2 'setvbuf' API style.
* guix/build/gnu-build-system.scm (gnu-build): Likewise.
2019-01-29 09:49:33 +01:00
23c2598233
gnu: x265: Update to 3.0.
...
* gnu/packages/video.scm (x265): Update to 3.0.
[source]: Remove patch.
* gnu/packages/patches/x265-detect512-all-arches.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-01-29 10:07:58 +02:00
db7c901af1
gnu: guix: Update to 4bddd12.
...
* gnu/packages/package-management.scm (guix): Update to 4bddd12
2019-01-28 23:52:20 +01:00
66abc619d5
gnu: Add missing file.
...
* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/installer/newt/user.scm.
2019-01-28 23:28:46 +01:00
95bc85b7da
gnu: Add openjdk 11.
...
* gnu/packages/java.scm (openjdk11): New variable.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-01-28 23:15:27 +01:00
4bddd12ad5
gnu: fish: Use fish-foreign-env to source /etc/profile.
...
* gnu/packages/shells.scm (fish): Use fish-foreign-env to source /etc/profile
when user logs in.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-28 23:13:41 +01:00
1d962fc0a1
gnu: Add fish-foreign-env.
...
* gnu/packages/shells.scm (fish-foreign-env): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-28 23:13:41 +01:00
e1dba5bea0
gnu: fish: Update to 3.0.0.
...
* gnu/packages/shells.scm (fish): Update to 3.0.0.
[source]: Remove dead URL.
[inputs]: Remove bc. Replace python-wrapper with python.
[arguments]: Remove configure-flags. Enable fish to source
/etc/fish/config.fish. Enable completions, functions and configurations
in user's and system's guix profiles.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-28 23:13:41 +01:00
d1d72830f2
pull: Don't trigger 'hash guix' hint needlessly.
...
Previously if ~/.config/guix/current/bin was in $PATH, we'd still
suggest to run 'hash guix' because we'd compare (which "guix") against
/var/guix/profiles/per-user/….
* guix/scripts/pull.scm (build-and-install): Check whether (which
"guix") matches PROFILE or its user-friendly variant.
2019-01-28 23:13:40 +01:00
3a8c4860fb
channels: Turn off deprecation warnings when loading 'build-self.scm'.
...
* guix/channels.scm (build-from-source): Parameterize
DEPRECATION-WARNING-PORT when loading SCRIPT.
2019-01-28 23:13:40 +01:00
ea6fb108f6
upstream: Temporarily skip failing test.
...
* tests/upstream.scm ("coalesce-sources same version"): Skip.
2019-01-28 23:13:40 +01:00
f15800946d
gnu: youtube-dl: Update to 2019.01.27.
...
* gnu/packages/video.scm (youtube-dl): Update to 2019.01.27.
2019-01-28 23:13:40 +01:00
5a23696a47
gnu: fastcap: Fix build and use INVOKE.
...
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace texlive-tiny
with a texlive-union including texlive-fonts-amsfonts.
[arguments]: Use INVOKE in build phases.
2019-01-28 20:30:20 +01:00
ad34338d1e
gnu: scons: Update to 3.0.3.
...
Fixes <https://bugs.gnu.org/34236 >.
* gnu/packages/python-xyz.scm (scons): Update to 3.0.3.
[arguments]: Add "bootstrap" phase.
2019-01-28 20:09:51 +01:00
1d1e3676ba
gnu: r-genomicfeatures: Update to 1.34.2.
...
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.2.
2019-01-28 16:27:35 +01:00
ea0eaf537a
gnu: r-variantannotation: Update to 1.28.10.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.10.
2019-01-28 16:27:35 +01:00
df00ca25bc
gnu: r-rmpfr: Update to 0.7-2.
...
* gnu/packages/cran.scm (r-rmpfr): Update to 0.7-2.
2019-01-28 16:27:35 +01:00
61cb2e3133
gnu: r-waveslim: Update to 1.7.5.1.
...
* gnu/packages/cran.scm (r-waveslim): Update to 1.7.5.1.
2019-01-28 16:27:35 +01:00
0207ad9ee8
gnu: r-activity: Update to 1.2.
...
* gnu/packages/cran.scm (r-activity): Update to 1.2.
[propagated-inputs]: Remove r-overlap.
2019-01-28 16:27:35 +01:00
211628044e
gnu: r-emmeans: Update to 1.3.2.
...
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.2.
2019-01-28 16:27:35 +01:00
62595ee342
gnu: r-th-data: Update to 1.0-10.
...
* gnu/packages/cran.scm (r-th-data): Update to 1.0-10.
2019-01-28 16:27:35 +01:00
ddd168ff32
gnu: r-acceptancesampling: Update to 1.0-6.
...
* gnu/packages/cran.scm (r-acceptancesampling): Update to 1.0-6.
2019-01-28 16:27:34 +01:00
7d4b98181a
gnu: r-vioplot: Update to 0.3.0.
...
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.0.
[propagated-inputs]: Add r-zoo.
2019-01-28 16:27:34 +01:00
b4b1a9440b
gnu: r-jomo: Update to 2.6-6.
...
* gnu/packages/cran.scm (r-jomo): Update to 2.6-6.
2019-01-28 16:27:34 +01:00
9e0162df85
gnu: r-fitdistrplus: Update to 1.0-14.
...
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.0-14.
2019-01-28 16:27:34 +01:00
fe24aa2a4f
gnu: r-colorspace: Update to 1.4-0.
...
* gnu/packages/cran.scm (r-colorspace): Update to 1.4-0.
2019-01-28 16:27:34 +01:00
b3578189aa
gnu: r-ggmap: Update to 2.6.2.
...
* gnu/packages/cran.scm (r-ggmap): Update to 2.6.2.
2019-01-28 16:27:34 +01:00
48246864b1
gnu: r-ranger: Update to 0.11.1.
...
* gnu/packages/statistics.scm (r-ranger): Update to 0.11.1.
2019-01-28 16:27:34 +01:00
56daae7b58
gnu: r-prabclus: Update to 2.2-7.
...
* gnu/packages/statistics.scm (r-prabclus): Update to 2.2-7.
2019-01-28 16:27:34 +01:00
f308d426fd
gnu: r-gplots: Update to 3.0.1.1.
...
* gnu/packages/statistics.scm (r-gplots): Update to 3.0.1.1.
2019-01-28 16:27:34 +01:00
69e9899a2f
gnu: r-hmisc: Update to 4.2-0.
...
* gnu/packages/statistics.scm (r-hmisc): Update to 4.2-0.
2019-01-28 16:27:34 +01:00
19fdd77c07
gnu: r-purrr: Update to 0.3.0.
...
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.0.
[propagated-inputs]: Remove r-tibble.
2019-01-28 16:27:34 +01:00
c21c5188f4
gnu: r-e1071: Update to 1.7-0.1.
...
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-0.1.
2019-01-28 16:27:34 +01:00
82dad63ef7
gnu: r-rcpparmadillo: Update to 0.9.200.7.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.7.0.
2019-01-28 16:27:34 +01:00
6d1db05086
gnu: r-openssl: Update to 1.2.1.
...
* gnu/packages/statistics.scm (r-openssl): Update to 1.2.1.
[native-inputs]: Add pkg-config.
[propagated-inputs]: Add r-askpass.
2019-01-28 16:27:34 +01:00
0550c2bf70
gnu: r-checkmate: Update to 1.9.1.
...
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.1.
2019-01-28 16:27:34 +01:00
d0fb25d94a
gnu: r-data-table: Update to 1.12.0.
...
* gnu/packages/statistics.scm (r-data-table): Update to 1.12.0.
2019-01-28 16:27:34 +01:00
5d9b140b29
gnu: r-qtl: Update to 1.44-9.
...
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.44-9.
2019-01-28 16:27:34 +01:00
439d821a3b
gnu: r-optparse: Update to 1.6.1.
...
* gnu/packages/bioinformatics.scm (r-optparse): Update to 1.6.1.
2019-01-28 16:27:33 +01:00
9d3a467214
gnu: Add r-askpass.
...
* gnu/packages/cran.scm (r-askpass): New variable.
2019-01-28 16:27:33 +01:00
2b106a8d71
gnu: Add r-sys.
...
* gnu/packages/cran.scm (r-sys): New variable.
2019-01-28 16:27:33 +01:00
f20f168121
nls: Update 'de' translation of the manual.
2019-01-28 15:45:48 +01:00
7d2be1277b
packages: 'package-input-rewriting' can take a promise.
...
* guix/packages.scm (package-input-rewriting): Allow REPLACEMENTS to be
a promise.
* gnu/packages/guile.scm (package-for-guile-2.0): Delay the first
argument to 'package-input-rewriting'.
2019-01-28 15:45:48 +01:00
796a4491fd
doc: Clarify 'sudo' vs. 'guix pull' and 'guix system reconfigure'.
...
* doc/guix.texi (Proceeding with the Installation): Clarify use of
"sudo" with "guix pull" and "guix system reconfigure".
2019-01-28 15:45:48 +01:00
10b507b234
gnu: Remove now unused 'package-for-guile-2.2' procedure.
...
* gnu/packages/guile.scm (package-for-guile-2.2): Remove.
2019-01-28 15:45:48 +01:00
40864d79fc
gnu: mumi: Update to 0.0.0-3.ea5a738.
...
* gnu/packages/mail.scm (mumi): Update to 0.0.0-3.ea5a738.
2019-01-28 15:27:16 +01:00
cd81199cbd
gnu: artanis: Update to 0.3.1.
...
* gnu/packages/guile-xyz.scm (artanis): Update to 0.3.1.
[snippet]: Remove bundled guile-redis.
[inputs]: Add guile-redis.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-01-28 15:19:46 +01:00
0791437f97
gnu: Move most packages from guile.scm to new module.
...
* gnu/packages/guile.scm (artanis, guildhall, guile-aspell, guile-bash,
guile-8sync, guile-daemon, guile-dsv, guile-fibers, guile-syntax-highlight,
guile-sjson, guile-colorized, guile-pfds, guile-aa-tree, guile-simple-zmq,
jupyter-guile-kernel, guile-sparql, guile-debbugs, guile-email,
guile-debbugs-next, guile-newt, guile-mastodon, guile-parted, guile-xosd,
guile-dbi, guile-dbd-sqlite3, guile-config, guile-hall, guile-ics, guile-wisp,
guile-sly, g-wrap, guile-miniadapton, guile-reader, guile2.2-reader,
guile-ncurses, guile-ncurses/gpm, guile-lib, guile2.0-lib, guile2.2-lib,
guile-minikanren, guile2.0-minikanren, guile2.2-minikanren, guile-irregex,
guile2.0-irregex, guile2.2-irregex, haunt, guile2.0-haunt, guile2.2-haunt,
guile-redis, guile2.0-redis, guile2.2-redis, guile-commonmark,
guile2.0-commonmark, guile2.2-commonmark, mcron, mcron2): Move these variables
from here...
* gnu/packages/guile-xyz.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/installer.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/ci.scm,
gnu/packages/gtk.scm,
gnu/packages/guile.scm,
gnu/packages/mail.scm,
gnu/packages/package-management.scm,
gnu/packages/skribilo.scm,
gnu/packages/web.scm,
gnu/services/mcron.scm: Update module references.
2019-01-28 14:57:10 +01:00
Mathieu Lirzin