d285657eae
gnu: bedtools: Update to 2.26.0.
...
* gnu/packages/bioinformatics.scm (bedtools): Update to 2.26.0.
2016-07-07 23:27:19 +10:00
7c7643a7f0
gnu: diamond: Update to 0.8.11.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.11.
2016-07-07 18:21:10 +08:00
0b166a7559
gnu: quassel: Build with modular qt.
...
* gnu/packages/irc.scm (quassel)[inputs]: Remove qt, add qtbase,
qttools, qtscript.
[arguments]: Disable webkit.
2016-07-07 12:23:39 +03:00
5f2074ca66
gnu: snorenotify: Build with modular qt.
...
* gnu/packages/kde.scm (snorenotify)[inputs]: Remove qt, add qtbase, qttools.
2016-07-07 12:23:39 +03:00
05b9c00e59
gnu: qca: Build with qtbase.
...
* gnu/packages/kde.scm (qca)[inputs]: Remove qt, add qtbase.
2016-07-07 12:23:39 +03:00
4742c4decc
gnu: Add qtscript.
...
* gnu/packages/qt.scm (qtscript): New variable.
2016-07-07 12:23:39 +03:00
66cf0f054d
gnu: Add r-domc.
...
* gnu/packages/statistics.scm (r-domc): New variable.
2016-07-07 10:46:39 +02:00
9003957e53
gnu: Add r-multitaper.
...
* gnu/packages/statistics.scm (r-multitaper): New variable.
2016-07-07 10:46:30 +02:00
274da826f9
gnu: Add r-seqinr.
...
* gnu/packages/bioinformatics.scm (r-seqinr): New variable.
2016-07-07 10:46:17 +02:00
fdd0f7b2a3
gnu: Add r-ade4.
...
* gnu/packages/statistics.scm (r-ade4): New variable.
2016-07-07 10:46:05 +02:00
939cf41c3f
gnu: python-oslosphinx: Update to 4.3.0.
...
* gnu/packages/openstack.scm (python-oslosphinx): Update to 4.3.0.
2016-07-07 06:54:06 +03:00
8157af2e09
gnu: khmer: Limit to x86_64 systems only.
...
* gnu/packages/bioinformatics.scm (khmer)[supported-systems]: New field.
2016-07-07 06:33:28 +03:00
25a814ceab
gnu: httpd: Update to 2.4.23.
...
Fixes CVE-2016-4979.
* gnu/packages/web.scm (httpd): Update to 2.4.23.
2016-07-06 14:37:46 -04:00
15ca556bbc
gnu: pumpa: Remove extra input.
...
* gnu/packages/pumpio.scm (pumpa)[inputs]: Remove qjson.
2016-07-06 21:22:36 +03:00
8f82641ac9
gnu: Add emacs-hl-todo.
...
* gnu/packages/emacs.scm (emacs-hl-todo): New variable.
2016-07-06 19:02:13 +02:00
2d634d9b7e
gnu: texlive: Fix 'texmf-local' search path.
...
* gnu/packages/tex.scm (texlive, texlive-minimal): Add
'native-search-paths'.
(texlive-texmf): Correct 'TEXMFLOCAL' definition in 'texmf.cnf' in
'texmf-config' phase.
2016-07-06 18:23:03 +02:00
41184943ae
gnu: Add emacs-ess.
...
* gnu/packages/emacs.scm (emacs-ess): New variable.
2016-07-06 13:25:50 +02:00
26112c0abb
gnu: python-numexpr: Update to 2.6.0.
...
* gnu/packages/python.scm (python-numexpr): Update to 2.6.0.
2016-07-06 12:02:18 +02:00
975cd29a98
gnu: r-ggplot2: Add r-svglite to propagated-inputs.
...
* gnu/packages/statistics.scm (r-ggplot2)[propagated-inputs]: Add
r-svglite.
2016-07-06 15:17:29 +08:00
3aebedcc02
gnu: Add r-svglite.
...
* gnu/packages/statistics.scm (r-svglite): New variable.
2016-07-06 15:17:29 +08:00
c5940b157e
gnu: Add r-gdtools.
...
* gnu/packages/statistics.scm (r-gdtools): New variable.
2016-07-06 15:17:29 +08:00
6baa83d283
gnu: sudo: Update to 1.8.17p1.
...
* gnu/packages/admin.scm (sudo): Update to 1.8.17p1.
[source]: Remove patch.
* gnu/packages/patches/sudo-CVE-2015-5602.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-06 07:28:09 +03:00
fda746b198
gnu: menu-cache: Update to 1.0.1.
...
* gnu/packages/lxde.scm (menu-cache): Update to 1.0.1.
2016-07-05 22:36:13 +03:00
d78c952dfd
gnu: lxtask: Update to 0.1.7.
...
* gnu/packages/lxde.scm (lxtask): Update to 0.1.7.
2016-07-05 22:33:20 +03:00
d7ec759a7a
gnu: lxrandr: Update to 0.3.1.
...
* gnu/packages/lxde.scm (lxrandr): Update to 0.3.1.
2016-07-05 22:30:38 +03:00
2c2a9ef79e
gnu: lxappearance: Update to 0.6.2.
...
* gnu/packages/lxde.scm (lxappearance): Update to 0.6.2.
2016-07-05 22:27:11 +03:00
5fb5dffbd4
gnu: Add multiqc.
...
* gnu/packages/bioinformatics.scm (multiqc): New variable.
2016-07-05 16:32:37 +02:00
091963c69b
gnu: Add perltidy.
...
* gnu/packages/perl.scm (perltidy): New variable.
2016-07-05 16:12:23 +02:00
1f1b20b8be
gnu: Add bits.
...
* gnu/packages/bioinformatics.scm (bits): New variable.
2016-07-05 15:43:36 +02:00
9a745d76f6
gnu: cross-gcc-arguments: Disable libitm, libvtv and libsanitizer.
...
* gnu/packages/cross-base.scm (cross-gcc-arguments)[arguments]: Add
"--disable-libitm", "--disable-libvtv" and "--disable-libsanitizer"
when libc is not present.
2016-07-05 14:55:21 +03:00
66e40e0065
gnu: Add EMBOSS.
...
* gnu/packages/bioinformatics.scm (emboss): New variable.
2016-07-05 12:32:12 +02:00
aae8ba4746
gnu: Add libharu.
...
* gnu/packages/pdf.scm (libharu): New variable.
2016-07-05 12:26:38 +02:00
5082eac957
gnu: Add perl-list-someutils.
...
* gnu/packages/perl.scm (perl-list-someutils): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:35 +02:00
8bcafb7440
gnu: Add perl-list-compare.
...
* gnu/packages/perl.scm (perl-list-compare): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:22 +02:00
056575421e
gnu: Add perl-io-captureoutput.
...
* gnu/packages/perl.scm (perl-io-captureoutput): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:04 +02:00
184497afec
build: Ignore texi2pdf temporary files.
...
* .gitignore: Modify.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:11:39 +02:00
b58cbf9ac5
services: Add rngd-service.
...
* gnu/services/base.scm (<rngd-configuration>): New record type.
(rngd-service-type): New variable.
(rngd-service): New procedure.
* doc/guix.texi (Base Services): Document it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:10:01 +02:00
cf91cfc0c4
gnu: testdisk: Update to 7.0.
...
* gnu/packages/admin.scm (testdisk): Update to 7.0.
2016-07-05 08:54:47 +02:00
d6a08ec0c6
gnu: testdisk: Add NTFS support.
...
* gnu/packages/admin.scm (testdisk)[inputs]: Add ntfs-3g.
2016-07-05 08:54:39 +02:00
0adc21c293
gnu: Add python2-pytest-cache.
...
* gnu/packages/python.scm (python2-pytest-cache): New variable.
(python-pytest-cache)[properties]: New field.
2016-07-04 22:47:15 +03:00
fa8af53e99
gnu: Add scrollkeeper.
...
* gnu/packages/documentation.scm (scrollkeeper): New variable.
2016-07-04 21:32:31 +02:00
42c4b24646
gnu: python2-pythondialog: Update to 3.4.0.
...
* gnu/packages/python.scm (python2-pythondialog): Update to 3.4.0.
[source]: Use pypi-uri.
Co-authored-by: Leo Famulari <leo@famulari.name>
2016-07-04 14:35:24 -04:00
35e2e49577
gnu: Add chromium-bsu.
...
* gnu/packages/games.scm (chromium-bsu): New variable.
2016-07-04 11:36:38 -04:00
744004a31f
gnu: Add r-edger.
...
* gnu/packages/bioinformatics.scm (r-edger): New variable.
2016-07-04 14:49:07 +02:00
7d4224d794
gnu: Add r-limma.
...
* gnu/packages/bioinformatics.scm (r-limma): New variable.
2016-07-04 14:39:16 +02:00
7034791aa2
gnu: Add emacs-eprime.
...
* gnu/packages/emacs.scm (emacs-eprime): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2016-07-04 10:14:18 +03:00
e446182e38
gnu: guix: Add emacs-magit-popup to propagated-inputs.
...
* gnu/packages/package-management.scm (guix-0.10.0): Add
'emacs-magit-popup' to make it possible to use "M-x guix" command.
2016-07-04 10:14:18 +03:00
c1562e3de1
gnu: Add emacs-magit-popup.
...
* gnu/packages/emacs.scm (emacs-magit-popup): New variable.
2016-07-04 10:14:18 +03:00
7012e2c716
gnurl: Update to 7.48.0.
...
* gnu/packages/gnunet.scm (gnurl): Update to 7.48.0.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-04 10:01:12 +03:00
9852994842
gnu: python-sphinx-rtd-theme: Update to 0.1.9.
...
* gnu/packages/python.scm (python-sphinx-rtd-theme, python2-sphinx-rtd-theme):
Update to 0.1.9.
2016-07-03 22:24:45 -04:00
Ben Woodcroft