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40145 Commits

Author SHA1 Message Date
Ludovic Courtès f6fe7da372
profiles: 'manual-database' hook reports progress. 
* guix/profiles.scm (manual-database)[build](compute-entries): Write a
progress report.
 2019-02-01 19:31:34 +01:00
Ludovic Courtès 35ef5bc866
guix package: '-A' no longer lists deprecated packages. 
Fixes a regression introduced in
0ea939fb79.

* guix/scripts/package.scm (process-query) <'list-available>: Change
 #:superseded? to #:deprecated? since that's what
 'fold-available-packages' passes.
 2019-02-01 19:28:49 +01:00
Tobias Geerinckx-Rice 389ae5181e
gnu: znc: Update to 1.7.2. 
* gnu/packages/messaging.scm (znc): Update to 1.7.2.
 2019-02-01 17:39:51 +01:00
Tobias Geerinckx-Rice 2049cbb326
doc: Update left-over references to lsh. 
* doc/guix.texi (Using the Configuration System, Defining Services):
Refer to OpenSSH instead of lsh.
 2019-02-01 17:39:51 +01:00
Leo Famulari 39ea311cbe
gnu: direnv: Update to 2.15.2. 
* gnu/packages/shellutils.scm (direnv): Update to 2.15.2.
[inputs]: Use the default Go compiler. Add go-github-com-burntsushi-toml
and go-github-com-direnv-go-dotenv.
[arguments]: Add a 'setup-go-environment' phase.
 2019-02-01 17:21:13 +01:00
Leo Famulari bc58bb9bdf
gnu: Add go-github-com-direnv-go-dotenv. 
* gnu/packages/golang.scm (go-github-com-direnv-go-dotenv): New variable.
 2019-02-01 17:21:10 +01:00
Pierre Neidhardt c4e4b85397
gnu: emacs-slime: Update to 2.23. 
* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.23.
 2019-02-01 17:13:17 +01:00
Leo Famulari 5d5e45850a
gnu: certbot, python-acme: Update to 0.30.2. 
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.30.2.
 2019-02-01 16:49:44 +01:00
Mark H Weaver 85ca23caba
gnu: linux-libre: Update to 4.20.6. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.6.
(%linux-libre-hash): Update hash.
 2019-01-31 23:59:06 -05:00
Mark H Weaver 65466a2b10
gnu: linux-libre@4.19: Update to 4.19.19. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.19.
(%linux-libre-4.19-hash): Update hash.
 2019-01-31 23:57:57 -05:00
Mark H Weaver 9d5414f1a4
gnu: linux-libre@4.14: Update to 4.14.97. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.97.
(%linux-libre-4.14-hash): Update hash.
 2019-01-31 23:57:06 -05:00
Mark H Weaver 20d32ac279
gnu: linux-libre@4.9: Update to 4.9.154. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.154.
 2019-01-31 23:56:15 -05:00
Eric Bavier 4b444fc5a5
gnu: imb: Update to 2019.1. 
* gnu/packages/benchmark.scm (imb)[source]: Update to 2019.1.  Use
git-download.
[arguments]: Adjust build and install phases for new source organization.  Let
the standard 'install-license-files' phase do its thing.
 2019-01-31 22:12:56 -06:00
Eric Bavier 56d447ba16
gnu: r-rmpi: Setup MPI for tests. 
* gnu/packages/cran.scm (r-rmpi)[arguments]: Add 'mpi-setup phase.
 2019-01-31 22:12:56 -06:00
Eric Bavier eb6785cfe7
gnu: fftw-openmpi: Setup MPI for tests. 
* gnu/packages/algebra.scm (fftw-openmpi)[arguments]: Add 'mpi-setup phase.
 2019-01-31 22:12:56 -06:00
Marius Bakke 0747328e31
Merge branch 'master' into staging 2019-01-31 23:32:56 +01:00
Yoshinori Arai ff75441fcf
gnu: Add xclock. 
* gnu/packages/xorg.scm (xclock): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-01-31 22:34:23 +01:00
Gabriel Hondet 07c82daad4
gnu: Add python-isrcsubmit. 
* gnu/packages/music.scm (python-isrcsubmit): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-01-31 22:01:43 +01:00
Gabriel Hondet 1331a6c07a
gnu: Add python-discid. 
* gnu/packages/music.scm (python-discid): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-01-31 22:01:43 +01:00
Marius Bakke 84243592fe
gnu: lookingglass: Download from git. 
* gnu/packages/virtualization.scm (lookingglass)[source]: Change to GIT-FETCH.
 2019-01-31 20:57:22 +01:00
Marius Bakke cb85742fa8
gnu: hwloc: Update to 2.0.3. 
* gnu/packages/mpi.scm (hwloc-2.0): Update to 2.0.3.
 2019-01-31 20:57:22 +01:00
Marius Bakke 9dd5084589
gnu: hwloc@1: Update to 1.11.12. 
* gnu/packages/mpi.scm (hwloc): Update to 1.11.12.
 2019-01-31 20:57:22 +01:00
Marius Bakke 8f8bc40677
gnu: VTK: Update to 8.2.0. 
* gnu/packages/image-processing.scm (vtk): Update to 8.2.0.
 2019-01-31 20:57:21 +01:00
Marius Bakke f1d4f264a2
gnu: VTK: Use HTTPS URLs. 
* gnu/packages/image-processing.scm (vtk)[source, home-page]: Use HTTPS.
 2019-01-31 20:57:21 +01:00
Marius Bakke 3cf3255796
gnu: whois: Update to 5.4.1. 
* gnu/packages/networking.scm (whois): Update to 5.4.1.
 2019-01-31 20:57:21 +01:00
Marius Bakke 8f22bf9e6d
gnu: json-modern-cxx: Fetch from git. 
* gnu/packages/cpp.scm (json-modern-cxx)[source]: Use GIT-FETCH.
[source](snippet): End on #t.
 2019-01-31 20:57:21 +01:00
Marius Bakke 0a3849f610
gnu: httpd: Update to 2.4.38. 
* gnu/packages/web.scm (httpd): Update to 2.4.38.
 2019-01-31 20:57:21 +01:00
Marius Bakke 71cb7512c4
gnu: libwebp: Update to 1.0.2. 
* gnu/packages/image.scm (libwebp): Update to 1.0.2.
 2019-01-31 20:57:21 +01:00
Marius Bakke 39855bfef1
gnu: p11-kit: Update to 0.23.15. 
* gnu/packages/patches/p11-kit-jks-timestamps.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tls.scm (p11-kit): Update to 0.23.15.
[source](patches): New field.
 2019-01-31 20:57:21 +01:00
Marius Bakke 7c56237b4c
gnu: i3-wm: Update to 4.16.1. 
* gnu/packages/wm.scm (i3-wm): Update to 4.16.1.
 2019-01-31 20:57:21 +01:00
Marius Bakke b8c0b9c1a3
gnu: msmtp: Update to 1.8.2. 
* gnu/packages/mail.scm (msmtp): Update to 1.8.2.
 2019-01-31 20:57:21 +01:00
Efraim Flashner 9117d6df87
gnu: tcc: Fix building on armhf-linux. 
* gnu/packages/c.scm (tcc)[arguments]: Add 'configure-flag to set the
triplet when building for armhf-linux.
 2019-01-31 18:39:19 +02:00
Efraim Flashner 0270b24b65
gnu: tcc: Mark aarch64-linux as supported. 
* gnu/packages/c.scm (tcc)[supported-systems]: Remove aarch64.
 2019-01-31 17:47:44 +02:00
Ricardo Wurmus 740a335558
gnu: Remove xboing. 
* gnu/packages/games.scm (xboing): Remove variable.
 2019-01-31 16:29:53 +01:00
Ricardo Wurmus 395a95bb75
gnu: guile-hall: Wrap with guile-config. 
* gnu/packages/guile-xyz.scm (guile-hall)[arguments]: Extend
"hall-wrap-binaries" phase to include guile-config in the load path.
 2019-01-31 16:26:22 +01:00
Andreas Enge adba64662c
gnu: Add python-cypari2 and python2-cypari2. 
* gnu/packages/sagemath.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.
 2019-01-31 14:58:47 +01:00
Leo Famulari 11d19ca236
gnu: QEMU: Fix CVE-2018-16872 and CVE-2019-6778. 
* gnu/packages/patches/qemu-CVE-2018-16872.patch,
gnu/packages/patches/qemu-CVE-2019-6778.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
 2019-01-31 14:35:48 +01:00
Arun Isaac a382860bd4
gnu: rss-bridge: Update to 2019-01-13. 
* gnu/packages/web.scm (rss-bridge): Update to 2019-01-13.
[source]: Use git-fetch.
[native-inputs]: Remove gzip and tar.
 2019-01-31 16:27:39 +05:30
Rutger Helling e1c3ffcfcd
gnu: scdoc: Update to 1.8.1. 
* gnu/packages/man.scm (scdoc): Update to 1.8.1.
 2019-01-31 10:09:29 +01:00
Nicolas Goaziou 2e484e78cd
gnu: mame: Update to 0.206. 
* gnu/packages/emulators.scm (mame): Update to 0.206.
 2019-01-30 22:59:44 +01:00
Kei Kebreau 0dcea35d9a
gnu: Add lhasa. 
* gnu/packages/compression.scm (lhasa): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-01-30 21:24:01 +01:00
Ricardo Wurmus ba123b6dda
gnu: star: Update to 2.7.0a. 
* gnu/packages/bioinformatics.scm (star): Update to 2.7.0a.
 2019-01-30 15:44:47 +01:00
Mark H Weaver 24886c1389
gnu: icecat: Update to 60.5.0-guix1 [security-fixes]. 
Includes fixes for CVE-2018-18500, CVE-2018-18501, and CVE-2018-18505.

* gnu/packages/gnuzilla.scm (icecat): Update to 60.5.0-guix1.
[version]: Use %icecat-version.
[source]: Inherit from 'icecat-source'.  Remove obsolete patches.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch,
gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch,
gnu/packages/patches/icecat-use-system-media-libs.patch: Adapt to 60.5.0.
 2019-01-29 22:29:42 -05:00
Mark H Weaver 948879eeda
gnu: icecat: Add icecat-source. 
* gnu/packages/gnuzilla.scm (computed-origin-method): New variable.
(%icecat-version, icecat-source): New variables.
* gnu/packages/patches/icecat-makeicecat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-01-29 22:29:40 -05:00
Ludovic Courtès 286bea0dba
gnu: clang-runtime@3.5: Fix compilation on glibc 2.28. 
Reported by zimoun <zimon.toutoune@gmail.com>.

* gnu/packages/llvm.scm (clang-runtime-3.5): Add
"clang-3.5-libsanitizer-ustat-fix.patch".
 2019-01-29 23:46:33 +01:00
Ludovic Courtès b552e307ed
gnu: guile-commonmark: Update to 0.1.2. 
* gnu/packages/guile-xyz.scm (guile-commonmark): Update to 0.1.2.
[source](modules, snippet): Remove.
 2019-01-29 23:46:33 +01:00
Ludovic Courtès db9771a9a9
gnu: guile-git: Update to 0.2.0. 
* gnu/packages/guile.scm (guile-git): Update to 0.2.0.
 2019-01-29 23:46:33 +01:00
Leo Famulari f5eb570c59
gnu: Mutt: Update to 1.11.2. 
* gnu/packages/mail.scm (mutt): Update to 1.11.2.
 2019-01-29 15:52:33 -05:00
Ricardo Wurmus 631337063e
gnu: Add texlive-latex-beamer. 
* gnu/packages/tex.scm (texlive-latex-beamer): New variable.
 2019-01-29 17:18:23 +01:00
Ricardo Wurmus 1d4c2dabef
gnu: texlive-latex-seminar: Copy files to output. 
* gnu/packages/tex.scm (texlive-latex-seminar)[build-system]: Use
trivial-build-system.
[arguments]: Copy files to output.
 2019-01-29 14:07:03 +01:00