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Author SHA1 Message Date
Leo Famulari 0b34b58688
gnu: libxslt: Fix CVE-2016-4738. 
* gnu/packages/patches/libxslt-CVE-2016-4738.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xml.scm (libxslt)[replacement]: New field.
(libxslt/fixed): New variable.
 2016-11-09 10:19:49 -05:00
Leo Famulari 667e777b4e
gnu: mupdf: Fix CVE-2016-{7504,7505,7506,7563,7564,9017,9136} in bundled mujs. 
* gnu/packages/patches/mupdf-CVE-2016-7504.patch,
gnu/packages/patches/mupdf-CVE-2016-7505.patch
gnu/packages/patches/mupdf-CVE-2016-7506.patch
gnu/packages/patches/mupdf-CVE-2016-7563.patch
gnu/packages/patches/mupdf-CVE-2016-7564.patch
gnu/packages/patches/mupdf-CVE-2016-9017.patch
gnu/packages/patches/mupdf-CVE-2016-9136.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf)[source]: Use them.
 2016-11-08 11:03:14 -05:00
Mark H Weaver 71e21fb26d
Merge branch 'master' into core-updates 2016-11-07 00:33:16 -05:00
Leo Famulari 14ac8e4865
gnu: jansson: Update to 2.9. 
* gnu/packages/web.scm (jansson): Update to 2.9.
[source]: Remove 'jansson-CVE-2016-4425.patch'.
* gnu/packages/patches/jansson-CVE-2016-4425.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-06 19:50:30 -05:00
Marius Bakke 6dbf1fec0d
gnu: lua: Update to 5.3.3. 
* gnu/packages/patches/lua52-liblua-so.patch: Rename to ...
* gnu/packages/patches/lua-liblua-so.patch: ... this. Add version comment.
* gnu/local.mk (dist_patch_DATA): Adjust patch name.
* gnu/packages/lua.scm (lua): Update to 5.3.3.
[source]: Use https URL. Use new patch name.
[home-page]: Use https URL.
(lua-5.2): New variable.
(lua-5.1)[source]: Use https URL.
 2016-11-06 16:17:16 +00:00
Mark H Weaver 8b6ad165d1
Merge branch 'master' into core-updates 2016-11-06 03:29:06 -05:00
Leo Famulari 2d125a9b21
gnu: weex: Update to 2.8.2 [fixes CVE-2005-3150]. 
* gnu/packages/ftp.scm (weex): Update to 2.8.2.
[source]: Use new URL. Remove obsolete 'weex-vacopy.patch'.
[arguments]: Remove custom 'configure' phase and add 'bootstrap' phase.
[native-inputs]: Add autoconf, automake, and gnu-gettext.
* gnu/packages/patches/weex-vacopy.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-05 13:31:44 -04:00
Kei Kebreau 674a0f9558
gnu: w3m: Switch to Debian's actively maintained fork of w3m. 
Fixes some security issues seen here:
<http://www.openwall.com/lists/oss-security/2016/11/03/3>

* gnu/packages/w3m.scm (w3m): Switch it.
[source]: Use Debian's git tree. Remove obsolete patches.
[arguments]: Remove an unneeded substitute* function.
* gnu/packages/patches/w3m-disable-sslv2-and-sslv3.patch,
gnu/packages/patches/w3m-disable-weak-ciphers.patch,
gnu/packages/patches/w3m-force-ssl_verify_server-on.patch,
gnu/packages/patches/w3m-libgc.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-04 20:06:03 -04:00
Ricardo Wurmus accd5f996e
gnu: python-ipython: Update to 4.0.0. 
* gnu/packages/python.scm (python-ipython): Update to 4.0.0.
[inputs]: Keep only "readline" and "which"; move the remaining inputs
to propagated-inputs, except for "python-requests" and "python-nose"
which are moved to native-inputs.
[propagated-inputs]: Add "python-pexpect", "python-pickleshare",
"python-simplegeneric", "python-traitlets", "python-ipykernel".
[native-inputs]: Add "python-testpath".
[arguments]: Enable building of HTML documentation.
[source]: Remove patch.
* gnu/packages/patches/python-ipython-inputhook-ctype.patch: Remove
patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-04 21:23:07 +01:00
Leo Famulari 8d806cb0e0
gnu: ola: Fix build failure caused by use of deprecated function. 
* gnu/packages/patches/ola-readdir-r.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/lighting.scm (ola)[source]: Use it.
 2016-11-04 01:44:42 -04:00
Kei Kebreau b81245ccb3
[PATCH] gnu: Add libjxr. 
* gnu/packages/image.scm (libjxr): New variable.
* gnu/packages/patches/libjxr-fix-function-signature.patch: New file.
* gnu/packages/patches/libjxr-fix-typos.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patches.
 2016-11-03 13:43:23 -04:00
Leo Famulari b3cc0dce08
Merge branch 'master' into core-updates 2016-11-02 20:03:35 -04:00
Marius Bakke bac3d6095d
gnu: python-django: Update to 1.10.3 [fixes CVE-2016-{9013,9014}]. 
* gnu/packages/django.scm (python-django, python2-django): Update to 1.10.3.
[source]: Remove patch.
* gnu/packages/patches/python-django-fix-testcase.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-01 14:02:01 -04:00
Leo Famulari 40330e555f
gnu: icecat: Fix build with binutils >= 2.26. 
* gnu/packages/patches/icecat-binutils.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Use it.
 2016-10-31 20:59:40 -04:00
Leo Famulari 205f0107bb
Merge branch 'master' into core-updates 2016-10-30 19:19:21 -04:00
Leo Famulari b89cbf5832
gnu: libtiff: Fix CVE-2016-5652. 
* gnu/packages/patches/libtiff-CVE-2016-5652.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff-fixed)[source]: Use it.
 2016-10-30 19:07:49 -04:00
Leo Famulari 062c7e43ed
Merge branch 'master' into core-updates 2016-10-29 21:44:44 -04:00
Theodoros Foradis 5b83b7b854
gnu: Add openocd. 
* gnu/packages/embedded.scm (openocd): New variable.
* gnu/packages/patches/openocd-nrf52.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patch.
 2016-10-30 02:34:26 +01:00
Leo Famulari a6447e7fb6
Merge branch 'master' into core-updates 2016-10-28 13:40:17 -04:00
Leo Famulari 95bff4f697
gnu: libwebp: Fix CVE-2016-9085. 
* gnu/packages/patches/libwebp-CVE-2016-9085.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libwebp)[source]: Use it.
 2016-10-28 13:39:37 -04:00
Efraim Flashner aa6c09ed71
gnu: python-parse: Fix failing test. 
* gnu/packages/python.scm (python-parse)[origin]: Add patch.
* gnu/packages/patches/python-parse-too-many-fields.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-10-27 23:28:07 +03:00
Leo Famulari 02c73adcdf
Merge branch 'master' into core-updates 2016-10-26 19:00:06 -04:00
Leo Famulari a19da40630
gnu: perl-www-curl: Fix build failure. 
* gnu/packages/patches/perl-www-curl-remove-symbol.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/web.scm (perl-www-curl)[source]: Use it.
 2016-10-26 18:44:16 -04:00
Marius Bakke 39df253e2b
gnu: mupdf: Modify CVE-2016-8674 patch to apply to 1.9a. 
The fix from upstream did not apply cleanly due to many context changes.
This was adapted by cloning mupdf 1.9a from git and fixing conflicts
after applying our patches and cherry-picking upstream commit 1e03c06.

This is a follow-up to 47a04fca99.

* gnu/packages/patches/mupdf-CVE-2016-8674.patch: Adapt to 1.9a.
 2016-10-26 15:03:42 +01:00
Marius Bakke d2a9b531fb
gnu: notmuch: Update to 0.23.1. 
* gnu/packages/patches/notmuch-emacs-25-compatibility-fix.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/mail.scm (notmuch): Update to 0.23.1. Remove patch.
 2016-10-26 10:45:49 +01:00
Kei Kebreau 47a04fca99
gnu: mupdf: Fix CVE-2016-8674. 
* gnu/packages/patches/mupdf-CVE-2016-8674.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (mupdf): Use it.
 2016-10-25 12:50:50 -04:00
Thomas Danckaert 4b12fe5cab
gnu: coda: Remove bundled libraries. 
* gnu/packages/maths.scm (coda): Remove bundled libraries.
[source]: Add patch and snippet to remove bundled zlib, pcre and expat.
[inputs]: Add system zlib, pcre and expat.
* gnu/packages/patches/coda-use-system-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-25 14:56:37 +02:00
Mark H Weaver e9a19bde40
gnu: linux-libre@4.1: Update to 4.1.35. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.35.  Remove
patch.
* gnu/packages/patches/linux-libre-4.1-CVE-2016-5195.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-24 22:53:18 -04:00
Mark H Weaver f1267c872f
gnu: mesa: Fix 'wayland-egl-symbols-check' on MIPS. 
* gnu/packages/patches/mesa-wayland-egl-symbols-check-mips.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gl.scm (mesa)[source]: Add patch when building on MIPS.
 2016-10-24 22:28:32 -04:00
Thomas Danckaert d3c4f3bb00
gnu: Add hdf-eos2. 
* gnu/packages/maths.scm (hdf-eos2): New variable.
* gnu/packages/patches/hdf-eos2-build-shared.patch: New file.
* gnu/packages/patches/hdf-eos2-remove-gctp.patch: New file.
* gnu/packages/patches/hdf-eos2-fortrantests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patches.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-24 23:05:20 +02:00
Leo Famulari 02cfea6627
gnu: musl: Fix CVE-2016-8859. 
* gnu/packages/patches/musl-CVE-2016-8859.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/musl.scm (musl)[source]: Use it.
 2016-10-23 18:08:17 -04:00
Mark H Weaver ca0635b4ba
Merge branch 'master' into core-updates 2016-10-23 14:16:39 -04:00
Efraim Flashner eccd1d24c9
gnu: hop: Update to 2.5.1. 
* gnu/packages/scheme.scm (hop): Update to 2.5.1.
[source]: Remove patch.
* gnu/packages/patches/hop-bigloo-4.0b.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-23 14:37:28 +03:00
Mark H Weaver a861665b75
gnu: linux-libre@4.1: Add fix for CVE-2016-5195. 
* gnu/packages/patches/linux-libre-4.1-CVE-2016-5195.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (linux-libre-4.1): Add patch.
 2016-10-22 00:30:38 -04:00
Christopher Allan Webber 7d2ee59b4a
gnu: slim: Fix line numbers in slim-login.patch. 
This was causing build failures.

* gnu/packages/patches/slim-login.patch: Fix line numbers.
 2016-10-21 12:51:33 -05:00
Eric Bavier 17d50dfdbb
gnu: slim: Display login message. 
* gnu/packages/patches/slim-login.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/display-managers.scm (slim)[source]: Use it.
 2016-10-20 16:47:20 -05:00
Eric Bavier 0b71c15c80
gnu: slim: Do not reset session after failed login. 
* gnu/packages/patches/slim-reset.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/display-managers.scm (slim)[source]: Use it.
 2016-10-20 16:47:19 -05:00
Leo Famulari c645cef7da
gnu: openssh: Fix CVE-2016-8858. 
* gnu/packages/patches/openssh-memory-exhaustion.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh)[source]: Use it.
 2016-10-19 18:02:39 -04:00
Leo Famulari 7ffa5d4a2d
gnu: python-file: Work around "double encoding" bug in file@5.28. 
* gnu/packages/patches/python-file-double-encoding-bug.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-file)[source]: Use it.
(python2-file)[source]: Use the source of FILE directly, without the
patch.
 2016-10-19 14:36:51 -04:00
Tobias Geerinckx-Rice 5e270e8e8f
gnu: lftp: Update to 4.7.3. 
* gnu/packages/ftp.scm (lftp): Update to 4.7.3.
[source]: Use HTTPS. Remove patch.
[arguments]: Add ‘disable-impure-tests’ phase. Add #:configure-flags with
explicit location of readline headers.
[home-page]: Use HTTPS.
* gnu/packages/patches/lftp-dont-save-unknown-host-fingerprint.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-19 19:34:17 +02:00
Marius Bakke 6cf27c89a5
gnu: notmuch: Enable tests. 
* gnu/packages/patches/notmuch-emacs-25-compatibility-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/mail.scm (notmuch)[source]: Use patch.
[arguments]: Add verbose make flags. Add phase 'patch-notmuch-lib.el' to
fix hard-coded /bin/sh. Add 'prepare-test-environment' phase to patch
test shebangs and set environment.
[native-inputs]: Change from 'emacs-minimal' to 'emacs-no-x'. Add dtach,
gnupg, man, perl and which.
 2016-10-19 17:00:37 +01:00
Mark H Weaver d2478b4cdd
Merge branch 'master' into core-updates 2016-10-19 10:54:36 -04:00
Christopher Allan Webber 3d1fe340db
gnu: kobodeluxe: Indicate origin of kobodeluxe-paths.patch. 
* gnu/packages/patches/kobodeluxe-paths.patch: Update header, pointing
  to Debian tarball for provenance.
 2016-10-18 20:35:01 -05:00
Stephen Webber a56145e1fa
gnu: Add kobodeluxe. 
* gnu/packages/games.scm (kobodeluxe): New variable.
* gnu/packages/patches/kobodeluxe-paths.patch: New file.
* gnu/packages/patches/kobodeluxe-enemies-pipe-decl.patch: New file.
* gnu/packages/patches/kobodeluxe-const-charp-conversion.patch: New file.
* gnu/packages/patches/kobodeluxe-manpage-minus-not-hyphen.patch: New file.
* gnu/packages/patches/kobodeluxe-midicon-segmentation-fault.patch: New file.
* gnu/packages/patches/kobodeluxe-graphics-window-signed-char.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2016-10-18 20:23:03 -05:00
ng0 91988aee12
gnu: torsocks: Update to 2.2.0. 
* gnu/packages/patches/torsocks-dns-test.patch: Delete file.
* gnu/local.mk: Remove it.
* gnu/packages/tor.scm (torsocks): Update to 2.2.0.
[source]: Remove patch. Change method from 'git-fetch' to 'url-fetch'.
Remove 'file-name'.
[arguments]: Remove 'bootstrap' phase.
[native-inputs]: Remove autoconf, automake and libtool. Also remove
obsoleted perl-test-harness.
[home-page]: Use https URL.
(define-module): Don't import perl.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-10-18 23:45:06 +01:00
Efraim Flashner b333d00c35
gnu: jasper: Update to 1.900.5. 
* gnu/packages/image.scm (jasper): Update to 1.900.5.
[source]: Remove patches.
[native-inputs]: Remove unzip.
* gnu/packages/patches/jasper-CVE-2007-2721.patch,
gnu/packages/patches/jasper-CVE-2008-3520.patch,
gnu/packages/patches/jasper-CVE-2008-3522.patch,
gnu/packages/patches/jasper-CVE-2011-4516-and-CVE-2011-4517.patch,
gnu/packages/patches/jasper-CVE-2014-8137.patch,
gnu/packages/patches/jasper-CVE-2014-8138.patch,
gnu/packages/patches/jasper-CVE-2014-8157.patch,
gnu/packages/patches/jasper-CVE-2014-8158.patch,
gnu/packages/patches/jasper-CVE-2014-9029.patch,
gnu/packages/patches/jasper-CVE-2016-1577.patch,
gnu/packages/patches/jasper-CVE-2016-1867.patch,
gnu/packages/patches/jasper-CVE-2016-2089.patch,
gnu/packages/patches/jasper-CVE-2016-2116.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-10-17 23:51:38 +03:00
Mark H Weaver dcaf70897a
Merge branch 'master' into core-updates 2016-10-17 16:47:12 -04:00
Ricardo Wurmus f90b2dbdb7
gnu: irrlicht: Update to 1.8.4. 
* gnu/packages/games.scm (irrlicht): Update to 1.8.4.
[arguments]: Delete phase "apply-patch/mesa-10-fix".
[native-inputs]: Remove "patch/mesa-10-fix".
* gnu/packages/patches/irrlicht-mesa-10.patch: Delete file.
* gnu/local.mk (dist_path_DATA): Remove irrlicht patch.
 2016-10-17 17:11:51 +02:00
Adonay Felipe Nogueira 8a666bc5cb
gnu: artanis: Remove implied $(DESTDIR) usage. 
* gnu/packages/patches/artanis-fix-Makefile.in.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
* gnu/packages/guile.scm (artanis)[source]: Use patch.
[arguments]: Remove DESTDIR from #:make-flags.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-10-17 15:20:11 +01:00
Al McElrath dd04f56a2b
gnu: node: Update to 6.8.0. 
Remove <https://debbugs.gnu.org/23744> and
<https://debbugs.gnu.org/23723> workaround.

* gnu/packages/node.scm (node): Update to 6.8.0.
  (node)[arguments]: Disabled more tests. Remove custom 'patch-shebangs'
  phase. Manually patch npm script shebang in new 'patch-npm-shebang'
  phase.
* gnu/packages/patches/node-9077.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patches.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-17 11:55:49 +02:00
Andreas Enge 60da9fb110
gnu: hdf4: Fix non-x86 architectures. 
* gnu/packages/patches/hdf4-architectures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
* gnu/packages/maths.scm (hdf4)[source]: Add patch.
 2016-10-16 17:00:56 +02:00
Theodoros Foradis dbc3c34ea0
gnu: Add arm-none-eabi-gcc-6. 
* gnu/packages/embedded.scm (gcc-arm-none-eabi-6): New variable.
* gnu/packages/patches/gcc-6-arm-none-eabi-multilib.patch: New file.
* gnu/packages/patches/gcc-6-cross-environment-variables.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patches.
 2016-10-16 11:53:07 +02:00
Leo Famulari e1376e25a7
gnu: gd: Fix CVE-2016-8670. 
* gnu/packages/patches/gd-CVE-2016-8670.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Use it.
 2016-10-15 15:31:49 -04:00
Efraim Flashner 76e8566c1b
gnu: freeimage: Fix CVE-2016-5684. 
* gnu/packages/image.scm (freeimage)[source]: Add patch.
* gnu/packages/patches/freeimage-CVE-2016-5684.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2016-10-14 13:42:43 +03:00
Leo Famulari e3d9da3c0c
gnu: gnupg: Remove superfluous patch. 
This patch was integrated into GnuPG 2.1.14.

* gnu/packages/patches/gnupg-fix-expired-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gnupg.scm (gnupg)[source]: Remove patch.
 2016-10-13 10:05:23 -04:00
Mark H Weaver 061d7f3bd2
Merge branch 'master' into core-updates 2016-10-13 05:53:07 -04:00
Mark H Weaver 1de17a648f
gnu: ghostscript: Fix CVE-2013-5653 and CVE-2016-{7976,7978,7979,8602}. 
* gnu/packages/patches/ghostscript-CVE-2013-5653.patch,
gnu/packages/patches/ghostscript-CVE-2016-7976.patch,
gnu/packages/patches/ghostscript-CVE-2016-7978.patch,
gnu/packages/patches/ghostscript-CVE-2016-7979.patch,
gnu/packages/patches/ghostscript-CVE-2016-8602.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/ghostscript.scm (ghostscript)[replacement]: New field.
(ghostscript/fixed): New variable.
(ghostscript/x): Inherit 'ghostscript/fixed'.
 2016-10-13 03:30:21 -04:00
Thomas Danckaert becbbefc9b
gnu: Add hdf4 
* gnu/packages/maths.scm (hdf4, hdf4-alt): New variables.
* gnu/packages/patches/hdf4-reproducibility.patch: New file.
* gnu/packages/patches/hdf4-shared-fortran.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patches.

Co-Authored-By: Jeremy Robst <jpro@bas.ac.uk>

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-12 23:35:43 +02:00
Leo Famulari 6671ce9370
gnu: ath9k-htc-firmware: Update binutils patch for binutils 2.27. 
* gnu/packages/patches/ath9k-htc-firmware-binutils.patch: Remove
unnecessary and conflicting hunk. Add hunk required for binutils 2.27.
 2016-10-12 16:17:22 -04:00
Mark H Weaver abcf4858cd
Merge branch 'master' into core-updates 2016-10-12 09:28:14 -04:00
Mark H Weaver bfb48f4f33
gnu: icecat: Update to 45.3.0-gnu1-beta. Add fixes from Firefox ESR 45.4.0. 
Includes fixes for CVE-2016-5250, CVE-2016-5257, CVE-2016-5261, CVE-2016-5270,
CVE-2016-5272, CVE-2016-5274, CVE-2016-5276, CVE-2016-5277, CVE-2016-5278,
CVE-2016-5280, CVE-2016-5281, and CVE-2016-5284.

* gnu/packages/gnuzilla.scm (mozilla-patch): New procedure.
(icecat): Update to 45.3.0-gnu1.
[source]: Add alternate source URI for the beta release.  Update patches.
[inputs]: Replace 'sqlite' input with a customized sqlite with
SQLITE_ENABLE_DBSTAT_VTAB support.
[native-inputs]: Add 'which'.
* gnu/packages/patches/icecat-avoid-bundled-includes.patch: Rename to...
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch: ... and adapt
to version 45.
* gnu/packages/patches/icecat-CVE-2016-2818-pt1.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt2.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt3.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt4.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt5.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt6.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt7.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt8.patch,
gnu/packages/patches/icecat-CVE-2016-2818-pt9.patch,
gnu/packages/patches/icecat-CVE-2016-2819.patch,
gnu/packages/patches/icecat-CVE-2016-2821.patch,
gnu/packages/patches/icecat-CVE-2016-2824.patch,
gnu/packages/patches/icecat-CVE-2016-2828.patch,
gnu/packages/patches/icecat-CVE-2016-2831.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
 2016-10-11 12:59:26 -04:00
Efraim Flashner bde70caa06
gnu: qemu: Patch CVE-2016-857{6,7,8}. 
* gnu/packages/qemu.scm (qemu)[source]: Add patches.
* gnu/packages/patches/qemu-CVE-2016-8576.patch,
gnu/packages/patches/qemu-CVE-2016-8577.patch,
gnu/packages/patches/qemu-CVE-2016-8578.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2016-10-11 10:59:07 +03:00
Marius Bakke fc0081213d
gnu: wpa-supplicant: Update to 2.6. 
* gnu/packages/admin.scm (wpa-supplicant-minimal)[source]: Update to
  2.6. Remove 'patches' field.
* gnu/packages/patches/wpa-supplicant-CVE-2015-5310.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2015-5314.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2015-5315.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2015-5316.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2016-4476.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt1.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt2.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt3.patch,
  gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt4.patch: Delete
  files.
* gnu/local.mk (dist_patch_DATA): Remove them.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-10-09 17:37:36 -04:00
Ricardo Wurmus 6f83d224bb
gnu: tcsh: Do not define BSDWAIT. 
* gnu/packages/patches/tcsh-do-not-define-BSDWAIT.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/shells.scm (tcsh)[source]: Use it.
 2016-10-09 22:38:37 +02:00
Leo Famulari 9e672bcc0b
gnu: libupnp: Fix CVE-2016-6255. 
* gnu/packages/patches/libupnp-CVE-2016-6255.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/libupnp.scm (libupnp): Use it.
 2016-10-09 15:57:28 -04:00
Andy Patterson 4b51b21ccf
gnu: Add cl-clx. 
* gnu/packages/lisp.scm (cl-clx, sbcl-clx, ecl-clx): New variables.
* gnu/packages/patches/clx-remove-demo.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
 2016-10-08 21:20:35 +08:00
Efraim Flashner 2ff746dcd2
gnu: isl: Add support for aarch64. 
* gnu/packages/gcc.scm (isl)[source]: Add patch.
* gnu/packages/patches/isl-0.11.1-aarch64-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2016-10-07 12:26:44 +03:00
Leo Famulari 1d8de185b8
gnu: openssl: Update to 1.0.2j. 
* gnu/packages/tls.scm (openssl): Update to 1.0.2j.
[replacement]: Remove field
[source]: Remove 'openssl-CVE-2016-2177.patch' and
'openssl-CVE-2016-2178.patch'.
(openssl-1.0.2j): Remove variable.
(openssl-next)[replacement]: Remove field.
* gnu/packages/patches/openssl-CVE-2016-2177.patch,
gnu/packages/patches/openssl-CVE-2016-2178.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-10-06 17:50:17 -04:00
Thomas Danckaert 0f43f8354c
gnu: Add hdf-eos5. 
* gnu/packages/maths.scm (hdf-eos5): New variable.
* gnu/packages/patches/hdf-eos5-build-shared.patch: New file.
* gnu/packages/patches/hdf-eos5-remove-gctp.patch: New file.
* gnu/packages/patches/hdf-eos5-fix-szip.patch: New file.
* gnu/packages/patches/hdf-eos5-fortrantests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patches.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-06 18:14:45 +02:00
Leo Famulari 22f08f0605
gnu: libxvmc: Update to 1.0.10. 
* gnu/packages/xorg.scm (libxvmc): Update to 1.0.10.
[replacement]: Remove field.
(libxvmc/fixed): Remove variable.
* gnu/packages/patches/libxvmc-CVE-2016-7953.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-05 19:36:26 -04:00
Leo Famulari 62ad505603
gnu: libxv: Update to 1.0.11. 
* gnu/packages/xorg.scm (libxv): Update to 1.0.11.
[replacement]: Remove field.
(libxv/fixed): Remove variable.
* gnu/packages/patches/libxv-CVE-2016-5407.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-05 19:36:25 -04:00
Leo Famulari 82e6a4341b
gnu: libxtst: Update to 1.2.3. 
* gnu/packages/xorg.scm (libxtst): Update to 1.2.3.
[replacement]: Remove field.
(libxtst/fixed): Remove variable.
* gnu/packages/patches/libxtst-CVE-2016-7951-CVE-2016-7952.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-05 19:36:25 -04:00
Leo Famulari 9eb76bd3e5
gnu: libxrender: Update to 0.9.10. 
* gnu/packages/xorg.scm (libxrender): Update to 0.9.10.
[replacement]: Remove field.
(libxrender/fixed): Remove variable.
* gnu/packages/patches/libxrender-CVE-2016-7949.patch,
gnu/packages/patches/libxrender-CVE-2016-7950.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-10-05 19:36:25 -04:00
Leo Famulari 2e81b0b5bf
gnu: libxrandr: Update to 1.5.1. 
* gnu/packages/xorg.scm (libxrandr): Update to 1.5.1.
[replacement]: Remove field.
(libxrandr/fixed): Remove variable.
* gnu/packages/patches/libxrandr-CVE-2016-7947-CVE-2016-7948.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-05 19:36:24 -04:00
Leo Famulari 571fa535cd
gnu: libxi: Update to 1.7.7. 
* gnu/packages/xorg.scm (libxi): Update to 1.7.7.
[replacement]: Remove field.
(libxi/fixed): Remove variable.
* gnu/packages/patches/libxi-CVE-2016-7945-CVE-2016-7946.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-05 19:36:24 -04:00
Leo Famulari 3e1ed70f74
gnu: libxfixes: Update to 5.0.3. 
* gnu/packages/xorg.scm (libxfixes): Update to 5.0.3.
[replacement]: Remove field.
(libxfixes/fixed): Remove variable.
* gnu/packages/patches/libxfixes-CVE-2016-7944.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-10-05 19:36:24 -04:00
Leo Famulari 4dd841c1dc
gnu: libx11: Update to 1.6.4. 
* gnu/packages/xorg.scm (libx11): Update to 1.6.4.
[replacement]: Remove field.
(libx11/fixed): Remove variable.
* gnu/packages/patches/libx11-CVE-2016-7942.patch,
gnu/packages/patches/libx11-CVE-2016-7943.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-10-05 19:36:24 -04:00
Leo Famulari b19c7989b7
Merge branch 'master' into core-updates 2016-10-05 19:15:25 -04:00
Leo Famulari 813062a5f7
gnu: libxvmc: Fix CVE-2016-7953. 
* gnu/packages/patches/libxvmc-CVE-2016-7953.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxvmc)[replacement]: New field.
(libxvmc/fixed): New variable.
 2016-10-05 17:37:23 -04:00
Leo Famulari e73631a906
gnu: libxv: Fix CVE-2016-5407. 
* gnu/packages/patches/libxv-CVE-2016-5407.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxv)[replacement]: New field.
(libxv/fixed): New variable.
 2016-10-05 17:37:22 -04:00
Leo Famulari 1f90b80f8b
gnu: libxtst: Fix CVE-2016-{7951,7952}. 
* gnu/packages/patches/libxtst-CVE-2016-7951-CVE-2016-7952.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxtst)[replacement]: New field.
(libxtst/fixed): New variable.
 2016-10-05 17:37:22 -04:00
Leo Famulari 666d40193c
gnu: libxrender: Fix CVE-2016-{7949,7950}. 
* gnu/packages/patches/libxrender-CVE-2016-7949.patch,
gnu/packages/patches/libxrender-CVE-2016-7950.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (libxrender)[replacement]: New field.
(libxrender/fixed): New variable.
 2016-10-05 17:37:22 -04:00
Leo Famulari a300db1c7f
gnu: libxrandr: Fix CVE-2016-{7947,7948}. 
* gnu/packages/patches/libxrandr-CVE-2016-7947-CVE-2016-7948.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxrandr)[replacement]: New field.
(libxrandr/fixed): New variable.
 2016-10-05 17:37:21 -04:00
Leo Famulari b78ba2274f
gnu: libxi: Fix CVE-2016-{7945,7946}. 
* gnu/packages/patches/libxi-CVE-2016-7945-CVE-2016-7946.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxi)[replacement]: New field.
(libxi/fixed): New variable.
 2016-10-05 17:37:21 -04:00
Leo Famulari b50c6bf2a8
gnu: libxfixes: Fix CVE-2016-7944. 
* gnu/packages/patches/libxfixes-CVE-2016-7944.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxfixes)[replacement]: New field.
(libxfixes/fixed): New variable.
 2016-10-05 17:37:21 -04:00
Leo Famulari 13c10b4ca4
gnu: libx11: Fix CVE-2016-{7942,7943}. 
* gnu/packages/patches/libx11-CVE-2016-7942.patch,
gnu/packages/patches/libx11-CVE-2016-7943.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (libx11)[replacement]: New field.
(libx11/fixed): New variable.
 2016-10-05 17:37:15 -04:00
Ludovic Courtès ab2cc5cde1
gnu: gsl: Disable failing tests on i686. 
* gnu/packages/patches/gsl-test-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (gsl)[source](patches): New field.
 2016-10-05 15:11:08 +02:00
Ludovic Courtès a884fa2141
gnu: rush: Update to 1.8. 
* gnu/packages/rush.scm (rush): Update to 1.8.
[source]: Remove 'patches'.
* gnu/packages/patches/cpio-gets-undeclared.patch,
gnu/packages/patches/rush-CVE-2013-6889.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2016-10-04 16:37:59 +02:00
Ben Woodcroft 2c3eb4b85b
gnu: metabat: Update to 0.32.4-1.cbdca756. 
* gnu/packages/bioinformatics.scm (metabat): Update to 0.32.4-1.cbdca756.
* gnu/packages/patches/metabat-remove-compilation-date.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-10-04 22:02:52 +10:00
Leo Famulari 9c2130757c
Merge branch 'master' into core-updates 2016-10-03 17:08:05 -04:00
Leo Famulari b38e97e03b
gnu: libarchive: Fix several security issues. 
* gnu/packages/backup.scm (libarchive)[replacement]: New field.
(libarchive/fixed): New variable.
* gnu/packages/patches/libarchive-7zip-heap-overflow.patch,
gnu/packages/patches/libarchive-fix-symlink-check.patch,
gnu/packages/patches/libarchive-fix-filesystem-attacks.patch,
gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2016-10-03 16:52:28 -04:00
Leo Famulari 917de2511b
gnu: gd: Fix CVE-2016-7568. 
* gnu/packages/patches/gd-CVE-2016-7568.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Use it.
 2016-10-01 12:27:37 -04:00
Ludovic Courtès 5bde29685b
gnu: perl: Make builds reproducible again. 
* gnu/packages/patches/perl-reproducible-build-date.patch: Add hunks to
set 'myuname', 'cf_time', and 'cf_by' in 'Configure'.
 2016-10-01 15:20:08 +02:00
Ivan Vilata i Balaguer 37356e0bf8
gnu: Add quickswitch-i3. 
* gnu/packages/wm.scm (quickswitch-i3): New variable.
* gnu/packages/patches/quickswitch-fix-dmenu-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
 2016-10-01 10:56:11 +08:00
Ludovic Courtès 79355ae3e8
Merge branch 'master' into core-updates 2016-09-30 12:05:27 +02:00
Rene Saavedra 411264c250
gnu: linux-pam: Allow compilation on GNU/Hurd. 
* gnu/packages/patches/linux-pam-no-setfsuid.patch: New file.
* gnu/packages/linux.scm (linux-pam)[source]: Use it.
(linux-pam-1.2)[source]: Likewise.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-28 23:01:49 +02:00
Ludovic Courtès 789f09a073
gnu: binutils: Work around Bash 4.2 bug. 
Fixes a 'binutils-cross-boot0' build failure on mips64el.

Reported at
<https://lists.gnu.org/archive/html/guix-devel/2016-09/msg01083.html>.

* gnu/packages/patches/binutils-mips-bash-bug.patch: New file.
* gnu/packages/base.scm (binutils)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-28 22:44:38 +02:00
Leo Famulari b9bc6e8420
gnu: expat: Fix regression caused by fix for CVE-2016-0718. 
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat/fixed): New variable.
* gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-27 13:49:49 -04:00
Ricardo Wurmus 204adc3017
gnu: azr3: Fix libsigc++ build errors. 
* gnu/packages/audio.scm (azr3)[arguments]: Add "-std=gnu++11" flag.
[source]: Add patch.
* gnu/packages/patches/azr3.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-26 10:47:58 +02:00
Danny Milosavljevic 03ddad84ba
gnu: flashrom: Update to 0.9.9 
* gnu/packages/flashing-tools.scm (flashrom): Update to 0.9.9.
[source]: Use HTTPS URL. Remove "flashrom-use-libftdi1.patch".
[aruments]: Add 'CONFIG_ENABLE_LIBUSB0_PROGRAMMERS=no' to #:make-flags.
* gnu/packages/patches/flashrom-use-libftdi1.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-23 19:03:19 -04:00
Efraim Flashner 0dbb7ac2df
gnu: plink: Set endian-ness on more architectures. 
* gnu/packages/patches/plink-endian-detection.patch: New file.
* gnu/packages/bioinformatics.scm (plink)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
 2016-09-22 22:42:37 +03:00
Leo Famulari d404a6f971
gnu: gnupg: Fix test failure. 
* gnu/packages/patches/gnupg-fix-expired-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (gnupg): Use it.
 2016-09-19 16:09:56 -04:00
Efraim Flashner b8ea5204ab
gnu: Add onionshare. 
* gnu/packages/tor.scm (onionshare): New variable.
* gnu/packages/patches/onionshare-fix-install-paths.patch: New variable.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-18 23:19:46 +03:00
Ricardo Wurmus 921cb13a96
gnu: Add llvm-for-extempore. 
* gnu/packages/llvm.scm (llvm-for-extempore): New variable.
* gnu/packages/patches/llvm-for-extempore.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-16 17:31:12 +02:00
Jan Nieuwenhuizen 253745d756
gnu: hydra: Update to 20151030.1ff48da. 
* gnu/packages/ci.scm (hydra): Update to 20151030.1ff48da (fixes building with
nix-1.11.x).
[source]: Remove 'hydra-automake-1.15.patch'.
[inputs]: Add libpqxx and perl-net-statsd.
* gnu/packages/patches/hydra-automake-1.15.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 15:43:07 -04:00
Leo Famulari 362bc747a2
gnu: mysql: Update to 5.7.15 [fixes CVE-2016-6662]. 
* gnu/packages/databases.scm (mysql): Update to 5.7.15.
[source]: Remove obsolete 'mysql-fix-failing-test.patch'.
* gnu/packages/patches/mysql-fix-failing-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-09-14 13:52:18 -04:00
Leo Famulari b1a782b11a
gnu: expat: Update to 2.2.0. 
* gnu/packages/xml.scm (expat): Update to 2.2.0.
[source]: Use 'expat-CVE-2016-0718-fix-regression.patch'. Remove obsolete
patches.
* gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: New file.
* gnu/packages/patches/expat-CVE-2012-6702-and-CVE-2016-5300.patch,
gnu/packages/patches/expat-CVE-2015-1283-refix.patch,
gnu/packages/patches/expat-CVE-2016-0718.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Add and remove patches.
 2016-09-13 20:37:33 -04:00
Ludovic Courtès e7e43727ce
gnu: gcc: Work around ARM bootstrapping failure (GCC bug #71399). 
* gnu/packages/patches/gcc-arm-bug-71399.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gcc.scm (gcc-4.9)[source]: Use it.
 2016-09-12 18:20:50 +02:00
Andreas Enge 378920defc
gnu: python-django: Add patch file. 
* gnu/packages/patches/python-django-fix-testcase.patch: New file.

This is a follow-up to commit d18197af78.
 2016-09-12 17:27:33 +02:00
Leo Famulari 35eade9cf3
gnu: jbig2dec: Update to 0.13. 
* gnu/packages/image.scm (jbig2dec): Update to 0.13.
[source]: Update URL.
[home-page]: Update URL.
* gnu/packages/patches/jbig2dec-ignore-testtest.patch: Adjust patch.
 2016-09-11 13:04:00 -04:00
Leo Famulari c41d97bed6
gnu: mupdf: Update to 1.9a. 
* gnu/packages/pdf.scm (mupdf): Update to 1.9a.
[source]: Use "mupdf-build-with-openjpeg-2.1.patch". Adjust snippet to
preserve bundled 'thirdparty/mujs'.
[inputs]: Add harfbuzz. Replace openjpeg-2.0 with openjpeg.
* gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-09 21:03:20 -04:00
Leo Famulari 4ce01773f3
gnu: openjpeg: Fix CVE-2016-5157. 
* gnu/packages/patches/openjpeg-CVE-2016-5157.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (openjpeg): Use it.
 2016-09-09 21:03:19 -04:00
Leo Famulari 0f97e7e5cd
gnu: openjpeg-2.*: Fix CVE-2016-7163. 
* gnu/packages/patches/openjpeg-CVE-2016-7163.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (openjpeg, openjpeg-2.0): Use it.
 2016-09-09 21:03:19 -04:00
Eric Bavier a2319d2c8f
gnu: Add Swish-e. 
* gnu/packages/search.scm (swish-e): New variable.
* gnu/packages/patches/swish-e-search.patch,
gnu/packages/patches/swish-e-format-security.patch: New patches.
* gnu/local.mk (dist_patch_DATA): Add them.
 2016-09-09 00:45:14 -05:00
Eric Bavier 1fa3e33604
gnu: Add steghide. 
* gnu/packages/image.scm (steghide): New variable.
* gnu/packages/patches/steghide-fixes.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-09 00:45:14 -05:00
Danny Milosavljevic a287fafef2
gnu: lua-5.1: install pkg-config file. 
* gnu/packages/patches/lua51-pkgconfig.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/lua.scm (lua-5.1)[source]: Add it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-06 22:02:17 +03:00
Leo Famulari 3ed3c105e3
gnu: slock: Fix CVE-2016-6866. 
* gnu/packages/patches/slock-CVE-2016-6866.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/suckless.scm (slock): Use it.
 2016-09-06 14:52:15 -04:00
Leo Famulari 763899f0db
gnu: Add openssl-next. 
* gnu/packages/tls.scm (openssl-next): New variable.
* gnu/packages/patches/openssl-1.1.0-c-rehash-in.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-06 13:47:32 -04:00
Kei Kebreau adbd7faf41
gnu: Add p7zip. 
* gnu/packages/compression.scm (p7zip): New variable.
* gnu/packages/patches/remove-unused-p7zip-code.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-04 16:27:31 +02:00
Danny Milosavljevic 8cfdd64c37
gnu: dtc: Update to 1.4.2. 
* gnu/packages/u-boot.scm (dtc): Update to 1.4.2. Delete patch.
* gnu/packages/patches/dtc-add-missing-symbols-to-lds.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Delete patch.

Signed-off-by: David Craven <david@craven.ch>
 2016-09-04 13:00:46 +02:00
Ricardo Wurmus 69913ed0e6
Merge branch 'gtk-im-modules' 2016-09-04 08:19:10 +02:00
Ludovic Courtès 072e10615f
Merge branch 'master' into core-updates 2016-09-02 15:39:50 +02:00
Ludovic Courtès e0649ff3c0
gnu: gawk: Update to 4.1.4. 
* gnu/packages/gawk.scm (gawk): Update to 4.1.4.
[source]: Remove 'patches'.
[arguments]: Add 'adjust-test-infrastructure' phase.
* gnu/packages/patches/gawk-fts-test.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2016-09-02 15:39:10 +02:00
Danny Milosavljevic f63e5eaaeb
gnu: dtc: Add missing symbols patch from debian. 
* gnu/packages/u-boot.scm (dtc)[source]: Add patch.
* gnu/packages/patches/dtc-add-missing-symbols-to-lds.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: David Craven <david@craven.ch>
 2016-09-02 00:16:34 +02:00
Leo Famulari 7335ca1d71
gnu: icedtea-6: Update to 1.13.12 [security fixes]. 
Fixes CVE-2016-{3458,3485,3500,3508,3550,3606}.

* gnu/packages/java.scm (icedtea-6): Update to 1.13.12.
[source]: Remove 'icedtea-remove-overrides' patch.
[arguments]: Move ALSA header substitution to 'patch-paths' phase.
* gnu/packages/patches/icedtea-remove-overrides.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-08-31 19:04:46 -04:00
Efraim Flashner 7a3f940541
gnu: fossil: Update to 1.35. 
* gnu/packages/version-control.scm (fossil): Update to 1.35.
[source]: Download from fossil-scm.org, remove patch, remove snippet.
* gnu/packages/patches/fossil-test-fixes.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-08-31 00:57:05 +03:00
Leo Famulari 72df668061
gnu: python-3: Update to python-3.5.2. 
* gnu/packages/patches/python-3.4-fix-tests.patch,
gnu/packages/patches/python-3.5-fix-tests.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/patches/python-fix-tests.patch: Move python-3.4 specific
hunk to 'gnu/packages/patches/python-3.4-fix-tests.patch'.
* gnu/packages/python.scm (python-3.5): New variable.
(python-3.4): Inherit from python-3.5.
[source]: Use 'gnu/packages/patches/python-3.4-fix-tests.patch'.
(python-3): Point to python-3.5.

Co-authored-by: Diane Trout <diane@ghic.org>
Co-authored-by: Christopher Allan Webber <cwebber@dustycloud.org>
 2016-08-29 21:44:15 -04:00
Christopher Allan Webber d0b73960db
gnu: python-3.4: Update to 3.4.5. 
* gnu/packages/patches/python-disable-ssl-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-3.4): Update to 3.4.5.
[source]: Remove patch.
[arguments]: Remove field.
(python-minimal)[inputs]: Add libffi.
 2016-08-29 21:44:11 -04:00
Leo Famulari 4b4fc92fe5
Merge branch 'master' into core-updates 2016-08-29 21:03:52 -04:00
Leo Famulari 4e9d5055fb
gnu: libtiff: Fix CVE-2016-5314. 
* gnu/packages/patches/libtiff-CVE-2016-5314.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed): Use it.
 2016-08-29 20:55:07 -04:00
Leo Famulari ed5940b617
gnu: libtiff: Fix CVE-2016-{3623,3945,3990,3991,5321,5323}. 
* gnu/packages/image.scm (libtiff)[replacement]: New field.
(libtiff/fixed): New variable.
* gnu/packages/patches/libtiff-CVE-2016-3623.patch,
gnu/packages/patches/libtiff-CVE-2016-3945.patch,
gnu/packages/patches/libtiff-CVE-2016-3990.patch,
gnu/packages/patches/libtiff-CVE-2016-3991.patch,
gnu/packages/patches/libtiff-CVE-2016-5321.patch,
gnu/packages/patches/libtiff-CVE-2016-5323.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2016-08-29 20:20:52 -04:00
Efraim Flashner b3d2be945d
Merge remote-tracking branch 'origin/master' into core-updates 2016-08-29 23:46:33 +03:00
Efraim Flashner a29a5f968a
gnu: cmake: Remove failed tests. 
* gnu/packages/patches/cmake-fix-tests.patch: Update file.
 2016-08-29 20:12:43 +03:00
Efraim Flashner 7ca3ce6b9f
gnu: xf86-video-openchrome: Update to 0.5.0. 
* gnu/packages/xorg.scm (xf86-video-openchrome): Update to 0.5.0.
[source]: Remove patch.
* gnu/packages/patches/xf86-video-openchrome-glibc-2.20.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-08-28 20:31:30 +03:00
Ricardo Wurmus 234e7980b5
gnu: gtk+: Add patch to support GUIX_GTK3_IM_MODULE_FILE. 
* gnu/packages/patches/gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch: New file.
* gnu/packages/gtk.scm (gtk+)[source]: Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-08-28 09:55:36 +02:00
Ricardo Wurmus 711670c04f
gnu: gtk+-2: Add patch to support GUIX_GTK2_IM_MODULE_FILE. 
* gnu/packages/patches/gtk2-respect-GUIX_GTK2_IM_MODULE_FILE.patch: New file.
* gnu/packages/gtk.scm (gtk+-2)[source]: Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-08-28 09:55:36 +02:00
Leo Famulari eba7fab890
gnu: flex: Fix CVE-2016-6354. 
* gnu/packages/flex.scm (flex)[source]: Add patch.
* gnu/packages/patches/flex-CVE-2016-6354.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-08-27 20:47:01 -04:00
Leo Famulari 6bd9a3432c
gnu: mupdf: Fix CVE-2016-{6265,6525}. 
* gnu/packages/patches/mupdf-CVE-2016-6265.patch,
gnu/packages/patches/mupdf-CVE-2016-6525.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf): Use them.
 2016-08-27 17:35:21 -04:00
Mark H Weaver 0bd865101d
gnu: guile-static: Adapt guile-relocatable.patch to guile-2.0.12. 
* gnu/packages/patches/guile-relocatable.patch: Adapt to guile-2.0.12.
 2016-08-21 06:30:15 -04:00
宋文武 a7f05b4192
gnu: gimp: Update to 2.8.16. 
* gnu/packages/patches/gimp-CVE-2016-4994.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gimp.scm (gimp): Update to 2.8.16.
[source]: Remove patch.
 2016-08-21 08:28:42 +08:00
Leo Famulari 9efd4312db
gnu: fontconfig: Update to 2.12.1. 
* gnu/packages/fontutils.scm (fontconfig): Update to 2.12.1.
(fontconfig/fixed): Remove variable.
* gnu/packages/patches/fontconfig-CVE-2016-5384.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-08-17 23:36:28 -04:00
Leo Famulari 015ee84aac
Merge branch 'master' into core-updates 2016-08-17 23:35:22 -04:00
Eric Bavier 22df70010a
gnu: Add NetSurf. 
* gnu/packages/web.scm (netsurf): New variable.
* gnu/packages/patches/netsurf-about.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-08-17 22:08:32 -05:00
Leo Famulari a3d6e1f432
gnu: perl: Update to 5.24.0. 
* gnu/packages/perl.scm: Update to 5.24.0.
[source]: Add and remove patches.
* gnu/packages/patches/perl-reproducible-build-date.patch: New file.
* gnu/packages/patches/perl-CVE-2015-8607.patch,
gnu/packages/patches/perl-CVE-2016-2381.patch,
gnu/packages/patches/perl-no-build-time.patch,
gnu/packages/patches/perl-source-date-epoch.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Add and remove patches.
 2016-08-17 22:55:15 -04:00
Leo Famulari 53dcbbec07
gnu: cracklib: Fix CVE-2016-6318. 
* gnu/packages/patches/cracklib-CVE-2016-6318.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/password-utils.scm (cracklib)[source]: Use the patch.
 2016-08-17 00:40:39 -04:00
Efraim Flashner 74a3c4bb6c
gnu: procps: Update to 3.3.12. 
* gnu/packages/linux.scm (procps): Update to 3.3.12.
[source]: Remove patch.
* gnu/packages/patches/procps-non-linux.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-08-15 10:42:27 +03:00
Jelle Licht f2b4c18cd9
gnu: jq: Fix CVE-2015-8863. 
* gnu/packages/patches/jq-CVE-2015-8863.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/web.scm (jq)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-08-11 15:42:32 -04:00
Jan Nieuwenhuizen b3de5ff221
gnu: Add laby. 
* gnu/packages/patches/laby-make-install.patch: New file.
* gnu/local.mk (dist_patch_DATA): gnu-system.am: Add it.
* gnu/packages/games.scm (laby): New variable.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
 2016-08-11 19:45:22 +08:00
Efraim Flashner f64b989b1b
gnu: dico: Update to 2.3. 
* gnu/packages/dico.scm (dico): Update to 2.3.
[inputs]: Add python-2, groff. Upgrade readline-6.2 to latest.
[source]: Remove patches.
* gnu/packages/patches/dico-idxcide-bug.patch,
* gnu/packages/patches/dico-libtool-deterministic.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-08-11 13:20:12 +03:00
Ben Woodcroft 1db791d5f4
gnu: ruby-rack: Update to 2.0.1. 
* gnu/packages/ruby.scm (ruby-rack): Update to 2.0.1.
[source]: Use GitHub and patch.
[native-inputs]: Add ruby-concurrent, ruby-minitest, ruby-minitest-sprint,
which.  Remove ruby-bacon.
[propagated-inputs]: Add ruby-concurrent.
* gnu/packages/patches/ruby-rack-ignore-failing-test.patch: New file.
* gnu/local.mk: Add it.
 2016-08-10 15:36:33 +10:00
Ben Woodcroft 3840373b39
gnu: ruby-puma: Update to 3.6.0. 
* gnu/packages/ruby.scm (ruby-puma): Update to 3.6.0.
[arguments]: Add 'delete-integration-tests' phase.
(gnu/packages/patches/ruby-puma-ignore-broken-test.patch):
Remove only one broken test.
 2016-08-10 15:36:33 +10:00
Tomáš Čech ba6d25f3b9
gnu: bash-completion: Update to 2.3. Update the patch. 
* gnu/packages/bash.scm (bash-completion): Update to 2.3.
* gnu/packages/patches/bash-completion-directories.patch: New version of
  the patch for the same purpose.
 2016-08-09 09:23:38 +02:00
Danny Milosavljevic 8d60dd7174
gnu: Add perl-net-dns-resolver-programmable. 
* gnu/packages/networking.scm (perl-net-dns-resolver-programmable): New variable.
* gnu/packages/patches/perl-net-dns-resolver-programmable-Fix-broken-interface.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-08-08 22:36:36 -04:00
Leo Famulari 6b5e654dd4
gnu: fontconfig: Fix CVE-2016-5384. 
* gnu/packages/fontutils.scm (fontconfig)[replacement]: New field.
(fontconfig/fixed): New variable.
* gnu/packages/patches/fontconfig-CVE-2016-5384.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-08-08 20:33:21 -04:00
Mark H Weaver 536fc5f8cd
Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
Mark H Weaver 0832787e5c
Revert "Merge branch 'core-updates'" 
This reverts commit 455859a50f.
 2016-08-04 08:16:38 -04:00
Ricardo Wurmus 8b52167e77
gnu: python-statsmodels: Fix tests. 
* gnu/packages/statistics.scm (python-statsmodels): Add patch to fix tests.
(python2-statsmodels)[propagated-inputs]: Add python2-pytz.
* gnu/packages/patches/python-statsmodels-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-08-04 13:40:13 +02:00
Pjotr Prins 0a4ebe0148
gnu: Add Elixir. 
* gnu/packages/elixir.scm: New file.
* gnu/packages/patches/elixir-disable-failing-tests.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add module.
(dist_patch_DATA): Add patch.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2016-08-02 18:31:29 +02:00
Ludovic Courtès 455859a50f
Merge branch 'core-updates' 2016-08-01 23:30:52 +02:00
Mark H Weaver 742effef56
gnu: openssh: Update to 7.3p1. 
* gnu/packages/ssh.scm (openssh): Update to 7.3p1.
[source]: Remove patches.
* gnu/packages/patches/openssh-CVE-2015-8325.patch,
gnu/packages/patches/openssh-CVE-2016-6210-1.patch,
gnu/packages/patches/openssh-CVE-2016-6210-2.patch,
gnu/packages/patches/openssh-CVE-2016-6210-3.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-08-01 14:27:08 -04:00
Mark H Weaver 3d337bbc39
Merge branch 'master' into core-updates 2016-07-31 23:27:03 -04:00
Andreas Enge 42bf34298e
gnu: rapicorn: Add patch to handle isnan. 
* gnu/packages/patches/rapicorn-isnan.patch: New file.
* gnu/packages/graphics.scm (rapicorn)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
 2016-07-31 18:16:25 +02:00
Andreas Enge 101e847294
gnu: dealii: Update to 8.4.1. 
* gnu/packages/maths.scm (dealii): Update to 8.4.1.
* gnu/packages/patches/dealii-p4est-interface.patch: Remove file.
 2016-07-31 15:22:41 +02:00
宋文武 85860fdf82
gnu: glibc-locales: Fix build. 
* gnu/packages/patches/glibc-locales.patch: Adjust to glibc-2.23.
* gnu/packages/base.scm (glibc-locales)[arguments]:
Pass 'lib_cv_complocaledir'.
 2016-07-31 10:42:47 +08:00
Eric Bavier 9b1ada4e81
gnu: Add Tux Paint. 
* gnu/packages/games.scm (tuxpaint): New variable.
* gnu/packages/patches/tuxpaint-stamps-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-07-29 21:50:15 -05:00
Alex Griffin 23319ed674
gnu: beets: Update to 1.3.19. 
* gnu/packages/music.scm (beets): Update to 1.3.19.
[source]: Remove patch to skip failing tests.
* gnu/packages/patches/beets-image-test-failure.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-07-29 19:19:49 -04:00
Mark H Weaver 359aba76b6
Merge branch 'master' into core-updates 2016-07-29 18:29:58 -04:00
Mark H Weaver 9bdf56dc13
gnu: gd: Add fix for gd2_read test. 
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add patch.
 2016-07-29 18:28:40 -04:00
Mark H Weaver 31c995f8af
Revert "gnu: gd: Add fix for gd2_read test." 
This reverts commit ce290354ec.
 2016-07-29 16:17:35 -04:00
Mark H Weaver ce290354ec
gnu: gd: Add fix for gd2_read test. 
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add patch.
 2016-07-29 16:06:43 -04:00
Mark H Weaver 0bab3af078
Merge branch 'master' into core-updates 2016-07-29 14:18:07 -04:00
Mark H Weaver a81445737d
gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207]. 
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch,
gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files.
* gnu/packages/patches/gd-fix-tests-on-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gd.scm (gd): Update to 2.2.3.
[source]: Update patches field accordingly.
 2016-07-29 13:56:39 -04:00
Leo Famulari 49d725a108
Merge branch 'master' into core-updates 2016-07-28 16:46:27 -04:00
Leo Famulari a1dfa02233
Revert "gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207]." 
This reverts commit ae46cd0e4c.
 2016-07-28 16:45:02 -04:00
Mark H Weaver 622c22ccb4
Merge branch 'master' into core-updates 2016-07-28 14:13:26 -04:00
Mark H Weaver ae46cd0e4c
gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207]. 
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch,
gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files.
* gnu/packages/patches/gd-fix-tests-on-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gd.scm (gd): Update to 2.2.3.
[source]: Update patches field accordingly.
 2016-07-28 14:06:12 -04:00
Ludovic Courtès 212163f8d5
gnu: dico: Patch 'idxgcide' bug. 
* gnu/packages/patches/dico-idxgcide-bug.patch: New file.
* gnu/packages/dico.scm (dico)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-07-28 14:18:59 +02:00
Andreas Enge e309c75610
Merge remote-tracking branch 'origin/master' into core-updates 2016-07-28 11:08:55 +02:00
Leo Famulari e335b82c4e
gnu: mysql: Update to 5.7.13 [fixes CVE-2016-{3477,3521,3615,5440}]. 
* gnu/packages/patches/mysql-fix-failing-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (mysql): Update to 5.7.13.
 2016-07-28 02:08:49 -04:00
Alex Griffin b111bdb667
gnu: calibre: Update to 2.63.0. 
* gnu/packages/ebook.scm (calibre): Update to 2.63.0.
[inputs]: Remove unnecessary imagemagick dependency.
[phases]: Use modify-phases.

* gnu/packages/patches/calibre-drop-unrar.patch: Update
for new version.

Signed-off-by: Roel Janssen <roel@gnu.org>
 2016-07-27 23:45:16 +02:00
Andreas Enge 14656f4495
Merge remote-tracking branch 'origin/master' into core-updates 2016-07-25 21:58:36 +02:00
Efraim Flashner d841a292b2
gnu: openssh: Fix CVE-2016-6210. 
* gnu/packages/ssh.scm (openssh)[source]: Add patches
openssh-CVE-2016-6210-1.patch, openssh-CVE-2016-6210-2.patch,
openssh-CVE-2016-6210-3.patch.
* gnu/packages/patches/openssh-CVE-2016-6210-1.patch: New file.
* gnu/packages/patches/openssh-CVE-2016-6210-2.patch: New file.
* gnu/packages/patches/openssh-CVE-2016-6210-3.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register them.
 2016-07-24 16:18:41 +03:00
Ludovic Courtès 7575655212
Merge branch 'master' into core-updates 2016-07-20 11:42:17 +02:00
Eric Bavier 3b956a3392
gnu: llvm: Update to 3.8.1. 
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 3.8.1.
(llvm-3.7, clang-runtime-3.7, clang-3.7): New variables.
(clang-runtime-from-llvm)[arguments]: Disable tests, which were not
being run for previous versions anyhow but now fail hard.
(clang-from-llvm): Add #:patches keyword argument.
* gnu/packages/patches/clang-3.8-libc-search-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Dennis Mungai <dmngaie@gmail.scm>
 2016-07-18 20:28:21 -05:00
Leo Famulari 2d656a93db
Revert "gnu: gnutls: Fix test failure." 
This reverts commit 1d14bf9f5f.
 2016-07-18 12:47:18 -04:00
Mark H Weaver 273260646d
gnu: gd: Fix failing test on i686. 
* gnu/packages/patches/gd-fix-test-on-i686.patch: New file.
* gnu/local.mk (dist_PATCH_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add the patch.
 2016-07-18 12:36:01 -04:00
Leo Famulari 1d14bf9f5f
gnu: gnutls: Fix test failure. 
* gnu/packages/patches/gnutls-fix-stale-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (gnutls)[replacement]: New field.
(gnutls/fixed): New variable.
 2016-07-18 12:30:39 -04:00
Leo Famulari a1537ac2ba
gnu: gd: Fix CVE-2016-{5766,6128,6132,6214}. 
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gd.scm (gd): Use patches.
 2016-07-16 12:49:22 -04:00
Ricardo Wurmus 0e6ee10c07
gnu: libmtp: Update to 1.1.11. 
* gnu/packages/patches/libmtp-devices.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/libusb.scm (libmtp): Update to 1.1.11.
 2016-07-10 18:02:04 +02:00
Ben Woodcroft ec2a67de88
gnu: Add python-dendropy. 
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New
variables.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-07-09 08:00:34 +10:00
Efraim Flashner 6baa83d283
gnu: sudo: Update to 1.8.17p1. 
* gnu/packages/admin.scm (sudo): Update to 1.8.17p1.
[source]: Remove patch.
* gnu/packages/patches/sudo-CVE-2015-5602.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-07-06 07:28:09 +03:00
Efraim Flashner dbd6bc5cc6
gnu: ninja: Update to 1.7.1. 
* gnu/packages/ninja.scm (ninja): Update to 1.7.1.
* gnu/packages/patches/ninja-tests.patch: Update patch.
 2016-07-03 12:00:25 +03:00
Efraim Flashner 6a628e8ba7
gnu: openimageio: Update to 1.6.15. 
* gnu/packages/graphics.scm (openimageio): Update to 1.6.15.
[source]: Remove patch.
* gnu/packages/patches/openimageio-boost-1.60.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-07-03 06:44:49 +03:00
Leo Famulari 9996ab16e6
gnu: gimp: Fix CVE-2016-4994. 
* gnu/packages/patches/gimp-CVE-2016-4994.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gimp.scm (gimp): Use it.
 2016-07-02 10:13:55 -04:00
Ricardo Wurmus b0069a6777
gnu: avrdude: Use libusb-compat. 
* gnu/packages/patches/avrdude-fix-libusb.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/flashing-tools.scm (avrdude)[source]: Remove patch.
[inputs]: Replace "libusb" with "libusb-compat".
 2016-06-29 07:15:33 +02:00
Ben Woodcroft 94ff31572d
gnu: Add khmer. 
* gnu/packages/bioinformatics.scm (khmer): New variable.
* gnu/packages/patches/khmer-use-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-06-27 21:35:16 +10:00
Ludovic Courtès 01497dfe6c
Merge branch 'master' into core-updates 2016-06-27 09:30:01 +02:00
David Craven 9dd674db01
daemon: Rename 'NIX_CONF_DIR' to 'GUIX_CONFIGURATION_DIRECTORY'. 
Partly fixes <http://bugs.gnu.org/22459>.
Reported by Jeff Mickey <j@codemac.net> and David Craven <david@craven.ch>.

* nix/libstore/globals.cc (Settings::processEnvironment()): Change
'NIX_CONF_DIR' to 'GUIX_CONFIGURATION_DIRECTORY'.
* nix/local.mk (libstore_a_CPPFLAGS): Likewise.
* guix/config.scm.in (%config-directory): Likewise.
* build-aux/test-env.in: Likewise.
* gnu/packages/patches/hydra-automake-1.15.patch: Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-06-26 23:11:07 +02:00
Leo Famulari 88c8d72f3c
gnu: beets: Update to 1.3.18. 
* gnu/packages/patches/beets-image-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (beets): Update to 1.3.18.
[source]: Use patch.
 2016-06-22 02:38:46 -04:00
Jan Nieuwenhuizen a837997cab
gnu: nasm: Make build bit-reproducible. 
* gnu/packages/patches/nasm-no-ps-pdf.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/assembly.scm (nasm): Use it.  Remove ghostscript, do not
build PS or PDF docs.  Makes build bit-reproducible.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-06-21 23:14:05 +02:00