Commit Graph

3613 Commits

Author SHA1 Message Date
Danny Milosavljevic 8376f10a30
ruby-build-system: Make phase "replace-git-ls-files" handle more cases.
* guix/build/ruby-build-system.scm (replace-git-ls-files): Modify.
2018-07-24 22:55:38 +02:00
Marius Bakke 8440db459a
import: PyPI: Update redirected URL.
* guix/import/pypi.scm (guix-package->pypi-name, pypi->guix-package): Update
docstrings.
(pypi-package?): Test for pypi.org, too.
(pypi-fetch): s/pypi.python.org/pypi.org/
* tests/pypi.scm ("guix-package->pypi-name, new URL style",
"pypi->guix-package", "pypi->guix-package, wheels"): Likewise.
2018-07-24 17:42:04 +02:00
Ludovic Courtès 2a3b1b3235
build-system: Add 'guile-build-system'.
* guix/build-system/guile.scm, guix/build/guile-build-system.scm: New
files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'guile-build-system'.
2018-07-23 12:25:31 +02:00
Marius Bakke e9be2c5409
Revert "guix: Compress and decompress xz archives in parallel."
Threaded compression makes archives non-deterministic: the result depends on
the number of threads used for compressing.  See <https://bugs.gnu.org/31015>.

This reverts commit 63102406f2.
2018-07-22 18:01:35 +02:00
Ludovic Courtès e475211869
database: Reset timestamps to one second after the Epoch.
Previously, store items registered in the database by this code (for
instance, store items retrieved by 'guix offload' and passed to
'restore-file-set') would have an mtime of 0 instead of 1.

This would cause problems for things like .go files: Guile would
consider them to be older than the corresponding .scm file, and
consequently it would ignore them and possibly use another (incorrect)
.go file.

Reported by Ricardo Wurmus.

* guix/store/database.scm (reset-timestamps): Pass 1, not 0, to
'utime'.
* tests/store-database.scm ("register-path"): Check the mtime of FILE
and REF.
2018-07-20 15:01:33 +02:00
Ludovic Courtès 4f89a8eec6
deduplication: Work around Guile bug in 'seek'.
Fixes <https://bugs.gnu.org/32161>.
Reported by Ricardo Wurmus <rekado@elephly.net>.

This mostly reverts 83099892e0.

* guix/store/deduplication.scm (counting-wrapper-port): New procedure.
(nar-sha256): Use it.
2018-07-20 15:01:33 +02:00
Leo Famulari 82549f2328
build-system/go: Use invoke instead of system*.
* guix/build/go-build-system.scm (unpack, build): Use invoke.
(install-source): Unconditionally return #t.
(check): Use invoke and unconditionally return #t.
2018-07-19 19:12:54 -04:00
Julien Lepiller 79d4d47b99
guix: ant-build-system: Reorder before generating INDEX.LIST.
* guix/build/ant-build-system.scm (%standard-phases): Add
reorder-jar-content phase.
2018-07-19 19:46:31 +02:00
Ludovic Courtès 83099892e0
deduplication: Remove 'counting-wrapper-port'.
* guix/store/deduplication.scm (counting-wrapper-port): Remove.
(nar-sha256): Call 'port-position' directly on PORT.
2018-07-19 17:12:48 +02:00
Ludovic Courtès c71cd4a61f
hash: sha256 port now implements 'port-position'.
* guix/hash.scm (open-sha256-port)[position]: New variable.
[get-position]: New procedure.
Pass it to 'make-custom-binary-output-port'.
* tests/hash.scm ("open-sha256-port, hello"): Test 'port-position'.
2018-07-19 17:08:53 +02:00
Ludovic Courtès f5db54eaa5
self: Use the new 'imported-files'.
That way, the source of most nodes is now a content-addressed store item
instead of a derivation.

* guix/self.scm (<file-mapping>): New record type.
(file-mapping-compiler): New procedure.
(scheme-node): Use 'file-mapping' instead of 'imported-files'.
(imported-files): Remove.
2018-07-19 11:48:04 +02:00
Ludovic Courtès e529d46828
gexp: 'imported-files/derivation' can copy files instead of symlinking.
* guix/gexp.scm (imported-files/derivation): Add #:symlink? and honor
it.
(imported-files): Pass #:symlink? to 'imported-files/derivation'.
* tests/gexp.scm ("imported-files with file-like objects"): Add 'file=?'
and use it instead of calling 'readlink'.
2018-07-19 11:48:04 +02:00
Ludovic Courtès 8df2eca6b0
gexp: 'imported-files' no longer creates a derivation by default.
* guix/gexp.scm (gexp->derivation): Add #:import-creates-derivation?.
Pass #:derivation? to 'imported-modules' and 'compiled-modules'.  In -L
argument, check whether MODULES is a derivation.
(%not-slash): New variable.
(file-mapping->tree): New procedure.
(imported-files): Rename to...
(imported-files/derivation): ... this.
(imported-files): New procedure.  Rewrite in terms of
'interned-file-tree' when possible; add #:derivation? parameter.
(imported-modules, compiled-modules): Add #:derivation? parameter and
pass it to 'imported-files'.
* guix/packages.scm (patch-and-repack): Pass
 #:import-creates-derivation? to 'gexp->derivation'.
* tests/gexp.scm ("imported-files"): Adjust to no longer expect a
derivation.
2018-07-19 11:48:04 +02:00
Ludovic Courtès 4d20d87b53
gexp: Remove unnecessary 'mlet'.
* guix/gexp.scm (imported-modules): Use 'let' instead of 'mlet'.
2018-07-19 11:48:04 +02:00
Ludovic Courtès 7f11efbac7
store: Add 'add-file-tree-to-store'.
* guix/store.scm (%not-slash): New variable.
(add-file-tree-to-store, interned-file-tree): New procedures.
* tests/store.scm ("add-file-tree-to-store"): New test.
2018-07-19 11:48:04 +02:00
Ludovic Courtès b94b698d4e
serialization: Add 'write-file-tree'.
* guix/serialization.scm (write-contents-from-port): New procedure.
(write-contents): Write in terms of 'write-contents-from-port'.
(filter/sort-directory-entries, write-file-tree): New procedures.
(write-file): Rewrite in terms of 'write-file-tree'.
* tests/nar.scm ("write-file-tree + restore-file"): New test.
2018-07-19 11:48:04 +02:00
Christopher Baines 0d354666d3
ruby-build-system: Error or return #t from all phases.
Previously, if the tests didn't pass, the check phase would evaluate to #f,
but the package would be built sucessfully. This changes all the phases to
raise exceptions if errors are encountered, and return #t otherwise.

This involves using invoke rather than system*, so that exceptions are raised
if the program exits with a status other than 0, and also returning #t at the
end of functions.

* gnu/build/ruby-build-system.scm (unpack): Use invoke rather than system*,
and return #t at the end.
(build, check): Use invoke rather than system*.
(install): Remove the use of "and", and rewrite the error handling to raise an
exception.
(wrap): Return #t.
2018-07-15 22:19:39 +01:00
Leo Famulari 27f7cbc91d
utils: Really clean up temporary directories.
Fixes <https://bugs.gnu.org/32126>.

* guix/utils.scm (call-with-temporary-directory): Use DELETE-FILE-RECURSIVELY
instead of RMDIR.
2018-07-13 17:33:45 -04:00
Ludovic Courtès bca302c67a
pull: Display new/upgraded packages upon completion.
* guix/scripts/pull.scm (display-profile-news): New procedure.
(build-and-install): Call it.
(display-new/upgraded-packages): Add #:heading and honor it.
2018-07-13 17:28:40 +02:00
Ludovic Courtès dc733e6a12
pull: Use (guix inferior) to display new and upgraded packages.
* guix/scripts/pull.scm (display-profile-content): Call
'display-generation'.
(display-new/upgraded-packages, display-profile-content-diff): New
procedures.
(process-query)[list-generation]: Remove.
[list-generations]: New procedure.
Adjust accordingly.
* doc/guix.texi (Invoking guix pull): Update example of '-l'.
2018-07-13 17:28:40 +02:00
Ludovic Courtès 2ca299caf6
Add (guix inferior) and (guix scripts repl).
* guix/inferior.scm, guix/scripts/repl.scm, tests/inferior.scm: New
files.
* Makefile.am (MODULES): Add 'guix/scripts/repl.scm' and
'guix/inferior.scm'.
(SCM_TESTS): Add 'tests/inferior.scm'.
* doc/guix.texi (Invoking guix repl): New node.
2018-07-13 17:28:39 +02:00
Ludovic Courtès bc6e291ef0
guix package: Use relative symlinks to generations.
Reported by Roel Janssen <roel@gnu.org>
at <https://lists.gnu.org/archive/html/guix-devel/2018-07/msg00036.html>.

* guix/profiles.scm (switch-to-generation): Use (basename generation) as
the symlink target.
* guix/scripts/package.scm (build-and-use-profile): Likewise,
use (basename name) as the symlink target.
* tests/guix-package.sh: Adjust --roll-back test accordingly.  Add
explicitly test with '-p foo/prof'.
2018-07-13 17:28:39 +02:00
Oleg Pykhalov ffc3fcade3
git: Call 'url-cache-directory' outside 'update-cached-checkout'.
* guix/git.scm (update-cached-checkout): Call 'url-cache-directory' in
'cache-directory' key argument.
(latest-repository-commit): Call 'url-cache-directory'.
2018-07-13 16:24:48 +03:00
Danny Milosavljevic e29067d22e
import: hackage: Fix typo.
* guix/import/cabal.scm (cabal-custom-setuo-name): Rename to...
(cabal-custom-setup-name): ...this.
2018-07-13 15:23:40 +02:00
Marius Bakke 49b6dc2b4e
Merge branch 'staging' 2018-07-13 00:25:45 +02:00
Danny Milosavljevic e39a44f340
import: hackage: Evaluate "-any" and "-none" version comparison operators.
* guix/import/cabal.scm (eval-cabal): Modify.
* tests/hackage.scm (test-cabal-4): New variable and test.
(test-cabal-5): New variable and test.
(test-cabal-6): New variable and test.
2018-07-12 20:35:04 +02:00
Danny Milosavljevic ecba50bb79
import: hackage: Support "-any" and "-none" version comparison operators.
* guix/import/cabal.scm (make-cabal-parser): Modify.
(is-any): New variable.
(is-none): New variable.
(lex-any): New procedure.
(lex-none): New procedure.
(lex-word): Modify.
(eval-cabal): Modify.
2018-07-12 09:06:48 +02:00
Danny Milosavljevic 314b63e0b4
import: hackage: Support "custom-setup" field.
Fixes <https://bugs.gnu.org/23961>.

* guix/import/cabal.scm (make-cabal-parser): Modify.
(is-custom-setup): New variable.
(lex-custom-setup): New procedure.
(is-id): Modify.
(lex-version): Modify.
(<cabal-custom-setup>): New record type.
(eval-cabal): Modify.
(dependencies): Add parameter.
2018-07-12 09:06:48 +02:00
Jan Nieuwenhuizen e8e1f295f1
gexp: Allow bytevector as content of `plain-file'.
This allows for using a package source directly from git, doing something like

    (define (command->bytevector command)
      (let ((port (apply open-pipe* OPEN_READ command)))
        (let ((output (get-bytevector-all port)))
          (close-port port)
          output)))

    (define-public hello-git
      (package
        (name "hello")
        (version "git")
        (source (let* ((commit "stable-2.0")
                       (content (command->bytevector
                                 `("git" "archive" "--format" "tar" "--prefix"
                                   ,(string-append commit "/") ,commit)))
                       (file-name (string-append "hello-" commit)))
                  (plain-file file-name content)))
        ...
        ))

* guix/gexp.scm (<plain-file>): Also allow bytevector content.
(plain-file-compiler): Handle bytevector content.
* doc/guix.texi (G-Expressions): Describe plain-file now also taking
bytevectors.
2018-07-12 06:22:04 +02:00
Jan Nieuwenhuizen f3a422511f
store: Add `binary-file'.
* guix/store.scm (binary-file): New function.
* doc/guix.texi (The Store Monad): Describe binary-file.
2018-07-12 06:22:04 +02:00
Ludovic Courtès daf76c7cd5
gnu-maintenance: Get GNU metadata from rec files.
Suggested by Mike Gerwitz <mtg@gnu.org>.

* guix/gnu-maintenance.scm (%package-list-url): Use the .rec file.
(%package-description-url): Likewise.
(official-gnu-packages)[read-records]: Skip record descriptors.
Rename fields to use underscores instead of hyphens.
2018-07-11 16:07:04 +02:00
Oleg Pykhalov 88388766f7
import: gem: Add recursive import.
* doc/guix.texi (Invoking guix import): Document gem recursive import.
* guix/import/gem.scm (gem->guix-package): Return package and dependencies
values.
(gem-recursive-import): New procedure.
* guix/scripts/import/gem.scm (show-help, %options): Add recursive option.
(guix-import-gem): Use 'gem-recursive-import'.
* tests/gem.scm (test-json): Rename to 'test-foo-json'.
("gem->guix-package"): Use 'test-foo-json'.
(test-bar-json, test-bundler-json): New variables.
("gem-recursive-import"): New test.
2018-07-11 07:08:54 +03:00
Danny Milosavljevic a59b0fa2d7
build-system/haskell: Make phases fail on error.
* guix/build/haskell-build-system.scm (configure): Make it fail on error.
(run-setuphs): Make it fail on error.
2018-07-11 02:45:53 +02:00
Ludovic Courtès dc013aff81
ui: Fix typo.
* guix/ui.scm (display-profile-content-diff): Fix typo in docstring.
2018-07-11 00:53:04 +02:00
Ludovic Courtès 78d55b703d
profiles: Introduce 'profile-search-paths' and use it.
* guix/profiles.scm (profile-search-paths): New procedure.
* guix/scripts/environment.scm (evaluate-search-paths): Remove.
(create-environment): Replace 'paths' with 'manifest'.  Use
'profile-search-paths' instead of 'evaluate-search-paths'.
(show-search-paths): Likewise.
(launch-environment): Replace 'paths' with 'manifest'.  Make 'pure?' a
keyword parameter.
(launch-environment/fork, launch-environment/container): Likewise.
(guix-environment): Remove 'paths' variable.  Adjust callers of the
above procedures accordingly.
2018-07-11 00:52:36 +02:00
Ludovic Courtès 10f0a40c16
environment: Simplify code by using manifests internally.
* guix/scripts/environment.scm (strip-input-name)
(package+propagated-inputs, package-or-package+output?)
(compact): Remove.
(inputs->profile-derivation): Rename to...
(manifest->derivation): ... this.  Replace 'inputs' parameter with
'manifest'.
(input->manifest-entry): New procedure.
(package-environment-inputs): Rewrite to return a list of manifest
entries.
(options/resolve-packages): Rewrite to return a manifest.
(guix-environment): Remove 'inputs'.  Define 'paths' in terms of
'manifest-search-paths'.
2018-07-11 00:52:36 +02:00
Ludovic Courtès f03df3ee75
profiles: Factorize 'manifest-search-paths'.
* guix/profiles.scm (manifest-search-paths): New procedure.
(profile-derivation)[builder]: Use it.
* guix/build/profiles.scm (build-etc/profile): Remove $PATH.
2018-07-11 00:52:36 +02:00
Julien Lepiller b24443bff9
guix: Add opam importer.
* guix/scripts/import.scm (importers): Add opam.
* guix/scripts/import/opam.scm: New file.
* guix/import/opam.scm: New file.
* tests/opam.scm: New file.
* Makefile.am: Add them.
* doc/guix.texi (Invoking guix import): Document it.
2018-07-10 10:11:01 +02:00
Marius Bakke 873325b030
Merge branch 'master' into staging 2018-07-08 23:58:22 +02:00
Kyle Meyer 85c3fbf5de
ui: Add -V as short option for --version.
* guix/ui.scm (run-guix): Add -V as the short option for --version for
consistency with most commands.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-07-07 18:10:31 +02:00
Kyle Meyer 7ede577a5f
scripts: Add missing -V option to commands that document it.
* guix/scripts/container.scm (guix-container):
* guix/scripts/import.scm (guix-import):
* guix/scripts/substitute.scm (guix-substitute): Add -V as the short option
for --version to match show-help's description.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-07-07 18:10:31 +02:00
Kyle Meyer 7a369f6d2f
weather: Fix pasto in --version output.
* guix/scripts/weather.scm (%options): Correct the command name passed to
show-version-and-exit.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-07-07 18:10:31 +02:00
Ludovic Courtès 5adb2df0a2
pack: Use guile-for-build for the target system.
Until now, running "guix pack -s i686-linux" on an x86_64-linux machine,
for instance, would use an x86_64 guile for module derivations.  This
was OK until now, but would break when passing "--localstatedir" due to
the introduction of guile-sqlite3: we'd be using the i686 guile-sqlite3
along with the x86_64 guile.

* guix/scripts/pack.scm (guix-pack): Pass the 'system option from OPTS
to 'package-derivation'.
2018-07-05 13:35:21 +02:00
Ludovic Courtès 5b0c648a7c
profiles: 'info-dir-file' hook now produces 'dir.LANG' files.
Previously, entries for 'guix.fr.info' would end up in 'dir', above the
'guix.info' entries; consequently, running 'info guix' would actually
open 'guix.fr.info', which was confusing for non-French readers.

* guix/profiles.scm (info-dir-file)[glibc-utf8-locales]: New variable.
[build](info-file-language): New procedure.
(install-info): Use it, to create 'dir.LANG' files.
Set GUIX_LOCPATH.
2018-07-04 10:52:59 +02:00
Ludovic Courtès 86eee976f5
Revert "packages: Optimize 'package-transitive-supported-systems'."
This reverts commit 24420f5ffa.

This broke 'package-transitive-supported-systems', which would return
the union of supported systems instead of the intersection.
2018-07-03 17:50:04 +02:00
Ludovic Courtès f3f1d0a557
guix system: Make 'init' idempotent again.
This fixes a regression introduced in
df2f6400b1fbc282ef4d6dd7124ea1c17adc23c2: since the new
'register-path' (actually 'reset-timestamps') would make files
read-only, 'delete-file-recursively' would fail to delete them.  Thus,
re-running 'guix system init' on an already-populated store would fail
with a 'delete-file' EPERM.

* guix/scripts/system.scm (copy-item): Use 'lstat' instead of
'file-exists?'.  Call 'make-file-writable' on each directory below
DEST.
2018-07-03 17:50:04 +02:00
Ludovic Courtès 90b144d22d
ui: Report file names in 'system-error' exceptions from 'delete-file'.
* guix/ui.scm (delete-file): New error-reporting wrapper.
2018-07-03 17:50:04 +02:00
Ludovic Courtès e5e5119855
database: 'reset-timestamps' now correctly handles symlinks.
* guix/store/database.scm (reset-timestamps): Use 'utime' with
AT_SYMLINK_NOFOLLOW for symlinks.
2018-07-03 17:50:04 +02:00
Ludovic Courtès 25c7ff6a3e
syscalls: Define AT_SYMLINK_NOFOLLOW et al.
* guix/build/syscalls.scm (AT_FDCWD, AT_SYMLINK_NOFOLLOW, AT_REMOVEDIR)
(AT_SYMLINK_FOLLOW, AT_NO_AUTOMOUNT, AT_EMPTY_PATH): New variables.
* tests/syscalls.scm ("utime with AT_SYMLINK_NOFOLLOW"): New test.
2018-07-03 17:50:04 +02:00
Ludovic Courtès a5b34d9d24
deduplication: Remove 'false-if-system-error', now unused.
* guix/store/deduplication.scm (false-if-system-error): Remove.
2018-07-03 17:50:04 +02:00
Oleg Pykhalov ae6fa00af0
import: elpa: Check if 'fetch-elpa-package' rest argument is null.
* guix/import/elpa.scm (fetch-elpa-package): Check if 'rest' is null.
2018-07-03 07:19:13 +03:00
Ludovic Courtès 3dbf331942
deduplication: Place link files under /gnu/store/.links.
Previously they'd always be placed next to TO-REPLACE, which would lead
to EPERM in some cases.

* guix/store/deduplication.scm (replace-with-link): Add #:swap-directory
parameter and honor it.  Add call to 'make-file-writable'.  Catch
'system-error' around 'rename-file'.
(deduplicate): Pass #:swap-directory and remove uses of
'false-if-system-error'.
* tests/store-deduplication.scm ("deduplicate"): Add 'chmod' call.
2018-07-03 00:39:11 +02:00
Ludovic Courtès af2f8ae5f1
deduplication: Fix incorrect use of 'throw'.
* guix/store/deduplication.scm (get-temp-link): In handler, fix call to
'throw'.
2018-07-03 00:39:11 +02:00
Ludovic Courtès 71bf6cb700
guix system: init: Check the available space before copying.
* guix/scripts/system.scm (copy-closure): Call 'query-path-info*' on
TO-COPY and REFS.  Compute the total size.  Call 'check-available-space'.
2018-07-03 00:39:11 +02:00
Ludovic Courtès 8120b23e51
ui: Make 'check-available-space' public.
* guix/ui.scm (check-available-space): Add optional 'directory'
parameter, defaulting to (%store-prefix).  Honor it.  Make public.
2018-07-03 00:39:10 +02:00
Ludovic Courtès 0744a9f002
store: Add 'query-path-info*'.
* guix/scripts/size.scm (query-path-info*): Move to...
* guix/store.scm (query-path-info*): ... here.
2018-07-03 00:39:10 +02:00
Ludovic Courtès 24420f5ffa
packages: Optimize 'package-transitive-supported-systems'.
This version is 13% faster than the one above when timing:

  (fold-packages (lambda (p x)
		   (package-transitive-supported-systems p))
		 '())

* guix/packages.scm (package-transitive-supported-systems): Make
'systems' a set instead of calling 'lset-intersection' repeatedly.
2018-07-03 00:39:10 +02:00
Ludovic Courtès 084f64cb03
self: Build with Guile 2.2.4.
* guix/self.scm (guile-for-build): In the "2.2" case, choose
GUILE-2.2.4.
2018-07-02 15:28:35 +02:00
Ludovic Courtès 8970a886e6
self: Use #:guile-for-build in the shebang of the 'guix' executable.
* guix/self.scm (guix-command): Add #:guile and pass it to 'program-file'.
(whole-package): Add #:guile and pass it to 'guix-command'.
(compiled-guix): Pass #:guile to 'guix-command' and 'whole-package'.
2018-07-02 15:28:35 +02:00
Ludovic Courtès 223fa5b327
utils: Micro-optimize 'source-properties->location'.
* guix/utils.scm (source-properties->location): Destructure LOC with
'match', adding a fast path without 'assq-ref' calls.
2018-07-02 15:28:35 +02:00
Ludovic Courtès 3059a35afe
utils: Disable memoization for 'location'.
This was getting 25% hits, which did not quite justify the overhead.

* guix/utils.scm (location): Remove 'mlambda'.
2018-07-02 15:28:35 +02:00
Marius Bakke 92af3ce417
Merge branch 'master' into staging 2018-07-02 12:18:58 +02:00
Marius Bakke cb4b508cd6
build-system/meson: Really skip the 'fix-runpath' phase on armhf.
This follows up commit d5b5a15a40 which doesn't
work because %current-system etc expands before the actual build.

Fixes <https://bugs.gnu.org/31719>.

* guix/build-system/meson.scm (meson-build)[builder]: Compare against the
already existing "system" variable rather than (%current-system).
2018-07-02 12:07:58 +02:00
Ludovic Courtès fd1395c498
ui: Increase relevance score for exact matches.
Previously "guix package -s python" would have 'python2-zope-interface' as
its first result (relevance: 10), followed by many other python-*
packages with the same score, while 'python' itself would come
later (relevance: 7).

This change makes 'python' the first result (relevance: 27).

Reported by Gábor Boskovits.

* guix/ui.scm (relevance)[score]: Use 'fold-matches' instead of
'match:count' to counter the number of maches.  Give more weight to
exact matches.
2018-06-29 22:56:33 +02:00
Mark H Weaver 2c8ac3641a
gnu: java: Return #t from all phases and snippets.
* guix/build/java-utils.scm (ant-build-javadoc): Use invoke; return #t.
* guix/build/ant-build-system.scm (generate-jar-indices): Return #t and
remove vestigal plumbing.
* gnu/packages/java.scm (classpath-bootstrap, ant-bootstrap, classpath-devel)
(icedtea-6, icedtea-7, java-plexus-sec-dispatcher, ant/java8, clojure)
(java-classpathx-servletapi, java-swt, java-qdox-1.12, java-hamcrest-core)
(java-plexus-archiver, java-plexus-sec-dispatcher, java-modello-plugins-xml)
(java-asm, java-commons-collections, java-commons-bsf, java-slf4j-api)
(java-slf4j-api, java-slf4j-simple, java-stringtemplate-3)
(java-stringtemplate, antlr3, antlr3-3.3, antlr3-3.1, java-ops4j-base-lang)
(java-ops4j-pax-tinybundles, java-ops4j-pax-exam-core-spi)
(java-fasterxml-jackson-core, java-fasterxml-jackson-databind)
(java-fasterxml-jackson-modules-base-jaxb, java-ecj-3, java-ecj-3.5)
(java-fasterxml-jackson-dataformat-yaml, java-woodstox-core)
(java-fasterxml-jackson-dataformat-xml, java-testng, java-jnacl)
(java-bouncycastle, java-powermock-core, java-powermock-modules-junit4)
(java-jansi-native, java-jansi, java-commons-httpclient, java-commons-vfs)
(java-apache-ivy, java-janino, java-logback-core): Return #t from all phases
and snippets, use invoke where appropriate, and remove vestigial plumbing.
2018-06-28 03:55:37 -04:00
Mark H Weaver 0e6cce2e01
meson-build-system: Return #t from all phases.
* guix/build/meson-build-system.scm (configure, build, check, install):
(fix-runpath): Use 'invoke' and return #t from all phases.
2018-06-28 03:55:34 -04:00
Ludovic Courtès 108015df6d
self: Add dependency on GnuTLS.
Fixes <https://bugs.gnu.org/31983>.
Reported by Fis Trivial <ybbs.daans@hotmail.com>.

* guix/self.scm (specification->package): Add "gnutls" and
"guile2.0-gnutls".
(compiled-guix)[gnutls]: New variable.
[dependencies]: Add it.
2018-06-27 23:30:44 +02:00
Taylan Kammer 0925c0ea77
scripts: gc: Report size in MiBs instead of bytes.
* guix/scripts/gc.scm (guix-gc): Show info in MiBs not bytes.
2018-06-28 00:29:46 +02:00
Ludovic Courtès 26db747a86
ui: Hint at the installation of locale packages and 'GUIX_LOCPATH'.
* guix/ui.scm (install-locale): Hide the "warning: failed to install
locale" on Guile 2.2.  Add a hint about 'glibc-utf8-locales' and
'GUIX_LOCPATH'.
2018-06-27 16:58:59 +02:00
Ludovic Courtès 2f608c1489
store: Add 'port->connection'.
* guix/store.scm (port->connection): New procedure.
2018-06-26 14:27:57 +02:00
Marius Bakke a167873c67
Merge branch 'master' into staging 2018-06-26 13:51:26 +02:00
Ludovic Courtès 66e9944e07
pack: Squashfs build expression refers to (guix store database) & co.
Fixes a regression introduced in
c45477d2a1.
Reported by Christopher Baines <mail@cbaines.net>.

* guix/scripts/pack.scm (not-config?, guile-sqlite3&co): New variables.
(self-contained-tarball)[not-config?]: Remove.
[build]: Use GUILE-SQLITE3&CO for 'with-extensions'.
(squashfs-image)[libgcrypt]: New variable.
[build]: Use 'source-module-closure', 'make-config.scm', and
'with-extensions'.
(docker-image)[not-config?]: Remove.
2018-06-25 23:34:38 +02:00
Christopher Baines 5970ceddfa
pack: Fix guix pack -f docker.
Without this change, running guix pack fails as (guix sets) is missing when
compiling (guix build store-copy).

* guix/scripts/pack.scm (docker-image): Move (guix build store-copy) to within
the source-module-closure call.
2018-06-24 09:24:26 +01:00
Ricardo Wurmus 945449b40b
guix: Fix system reconfigure.
This is a follow-up to 378daa8cb6.

* guix/scripts/system.scm (switch-to-system): Lower the script.
2018-06-21 16:54:06 +02:00
Marius Bakke 4dfea1010a
Merge branch 'master' into staging 2018-06-21 15:52:26 +02:00
Ludovic Courtès e203f4c26a
guix system: 'list-generation' correctly displays file system labels.
* guix/scripts/system.scm (display-system-generation): Correctly display
file system labels.  Previously, starting from commit
a5acc17a3c, it'd print #<file-system-label "foo">.
2018-06-20 23:47:08 +02:00
Marius Bakke 0106d6b40d
Merge branch 'master' into staging 2018-06-19 17:02:16 +02:00
Ricardo Wurmus b194da0d68
build-system/waf: Use invoke.
* guix/build/waf-build-system.scm (call-waf): Use "invoke" and unconditionally
return #t.
2018-06-19 10:48:14 +02:00
Ludovic Courtès 7af5c2a248
self: Define derived '-directory' variables in config.scm.
This is a followup to d6b5aa0b03.

* guix/self.scm (%config-variables): Remove %CONFIG-DIRECTORY,
%STATE-DIRECTORY, %STORE-DATABASE-DIRECTORY, and %STORE-DIRECTORY.
(make-config.scm): Define them here.
* build-aux/build-self.scm (%config-variables, make-config.scm):
Likewise.
2018-06-18 23:56:16 +02:00
Ludovic Courtès e8cb9c01c6
build: Remove checks for 'nix-instantiate'.
* guix/import/snix.scm (open-nixpkgs): Use "nix-instantiate"
unconditionally.
* configure.ac: Remove check for 'nix-instantiate'.
* guix/config.scm.in (%nix-instantiate): Remove.
* guix/self.scm (%dependency-variables): Remove '%nix-instantiate'.
(make-config.scm): Remove it from the generated "config.scm".
* build-aux/build-self.scm (%dependency-variables, make-config.scm):
Likewise.
2018-06-18 23:19:51 +02:00
Ludovic Courtès 45779fa676
self: Make (guix config) generation really stateless.
Previously the %CONFIG-VARIABLES list would be generated based on what
the current (guix config) contains.  Thus, it would include
'%guix-register-program', which we recently removed, because
existing (guix config) most likely contained that variable.  Since its
value could differ from machine to machine, the build farm could be
building a different config.scm, thereby preventing people from getting
substitutes.

* guix/self.scm (%config-variables): Turn into a white list instead of
taking all the remaining variables from the current (guix config).
* build-aux/build-self.scm (%config-variables): Likewise.
2018-06-18 23:19:51 +02:00
Ludovic Courtès 870677cbb8
compile: Work around non-thread-safe module autoloading.
* guix/build/compile.scm <top level>: Set 'try-module-autoload' when
running on Guile < 2.2.4.
2018-06-18 23:19:51 +02:00
Gábor Boskovits 90ea1006a8
guix: ant-build-system: Use manifest task to create manifest.
* guix/build/ant-build-system.scm (default-build.xml): Use manifest task
to create manifest file instead of a custom echo task.
2018-06-18 17:08:32 +02:00
Marius Bakke 6969c4de44
Merge branch 'master' into staging 2018-06-18 15:29:38 +02:00
Ricardo Wurmus 32eb44240d
build-system/r: Accept #:r argument.
* guix/build-system/r.scm (lower): Add #:r to private-keywords.
2018-06-18 13:51:28 +02:00
Ludovic Courtès a89faa3faa
self: Install .go files to 'lib/guile/X.Y/site-ccache'.
* guix/self.scm (guix-command): Add 'compiled-modules' parameter and
honor it.
(whole-package): Likewise.
(compiled-guix)[built-modules]: Turn into a procedure.
When PULL-VERSION is 1, use separate source and compiled modules.
When PULL-VERSION is 0, return a single directory containing both .scm
and .go files.
2018-06-17 01:40:14 +02:00
Marius Bakke 259341cf93
gnu: ldb: Fix build on 32-bit systems.
* guix/utils.scm (target-64bit?): New procedure.
* gnu/packages/samba.scm (ldb)[inputs]: Only add LMDB on 64-bit systems.
[arguments]: Make #:tests? conditional on LMDB availability.
2018-06-16 21:35:25 +02:00
Ricardo Wurmus d7ee90fe90
build-system/ant: Unconditionally return #t in build phases.
* guix/build/ant-build-system.scm (unpack, build, strip-jar-timestamps, check,
install): Use invoke.

Signed-off-by: Gábor Boskovits <boskovits@gmail.com>
2018-06-16 20:51:32 +02:00
Ludovic Courtès 265048cc89
offload: Fix error message in 'guix offload test'.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>
in <https://bugs.gnu.org/31824>.

* guix/scripts/offload.scm (assert-node-has-guix): Fix typo in failure
message; add missing argument.
2018-06-15 10:04:59 +02:00
Ludovic Courtès a9a685cc00
offload: Gracefully handle invalid results from 'machines.scm'.
* guix/scripts/offload.scm (build-machines): Check the result of FILE.
Ignore it if it's not a list of <build-machine>.
2018-06-14 23:34:59 +02:00
Ludovic Courtès baed923682
self: Add 'guix-daemon' to the result.
* gnu/packages/package-management.scm (guix-daemon): New variable.
* guix/self.scm (whole-package): Add #:daemon and honor it.
(compiled-guix): Pass #:daemon to 'whole-package'.
2018-06-14 23:34:59 +02:00
Julien Lepiller af09bed7dc
guix: ui: Allow translation of dates.
* guix/ui.scm (display-generation): Allow translation of dates.
The format string will show dates as month day year, but some languages use a
different convention.
2018-06-14 21:53:12 +02:00
Ludovic Courtès ea0a06cee2
Remove 'guix-register' and its traces.
* Makefile.am (SH_TESTS): Remove tests/guix-register.sh.
* build-aux/pre-inst-env.in (GUIX_REGISTER): Remove.
* gnu/build/install.scm (directives): Remove outdated comment.
* gnu/build/vm.scm (root-partition-initializer): Update comment.
* gnu/packages/package-management.scm (guix-register): Remove.
* guix/config.scm.in (%sbindir, %guix-register-program): Remove.
* guix/scripts/system.scm (install): Adjust docstring.
* guix/self.scm (make-config.scm): Remove #:guix.  Do not generate
%sbindir and %guix-register-program.
(specification->package): Remove "guix".
* nix/guix-register/guix-register.cc: Remove.
* nix/libstore/store-api.cc (decodeValidPathInfo): Remove.
* nix/libstore/store-api.hh (decodeValidPathInfo): Remove declaration.
* nix/local.mk (sbin_PROGRAMS, guix_register_SOURCES)
(guix_register_CPPFLAGS, guix_register_LDFLAGS): Remove.
* tests/guix-register.sh: Remove.
2018-06-14 11:17:00 +02:00
Ludovic Courtès df2f6400b1
store: Remove 'register-path'.
* guix/store.scm (register-path): Remove.
* guix/nar.scm: Use (guix store database).
* guix/scripts/system.scm: Likewise.
* tests/store-database.scm: Remove #:hide (register-path).
* tests/store.scm ("register-path"): Remove.
2018-06-14 11:17:00 +02:00
Ludovic Courtès eb9fe97495
database: Allow for deterministic database construction.
Fixes <https://bugs.gnu.org/21073>.

* guix/store/database.scm (sqlite-register): Add #:time.
(%epoch): New variable.
(register-items): Add #:registration-time.  Pass #:time to
'sqlite-register'.
* gnu/build/install.scm (register-closure): Pass #:registration-time.
2018-06-14 11:17:00 +02:00
Ludovic Courtès 078c2329c0
install: Use 'reset-timestamps' from (guix store database).
* gnu/build/install.scm (reset-timestamps): Remove.
* gnu/build/vm.scm: Use 'reset-timestamps' from (guix store database).
2018-06-14 11:17:00 +02:00
Ludovic Courtès 31a63be878
database: Add 'register-items'.
* guix/build/store-copy.scm (store-info): Export.
* guix/store/database.scm (register-items): New procedure.
(register-path): Implement in terms of 'register-items'.
* gnu/build/install.scm (register-closure): Use 'register-items' instead
of 'for-each' and 'register-path'.
2018-06-14 11:17:00 +02:00
Ludovic Courtès ef1297e8c7
database: 'sqlite-register' takes a database, not a file name.
* guix/store/database.scm (sqlite-register): Remove #:db-file and add
'db' parameter.  Remove #:schema and 'parameterize'.
(register-path): Wrap 'sqlite-register' call in 'with-database' and in
'parameterize'.
* tests/store-database.scm ("new database")
("register-path with unregistered references"): Adjust accordingly.
2018-06-14 11:17:00 +02:00
Ludovic Courtès c45477d2a1
install: Use (guix store database) instead of 'guix-register'.
* gnu/build/install.scm (register-closure): Add #:reset-timestamps? and
and #:schema; honor them.  Rewrite in terms of 'register-path'.
(populate-single-profile-directory): Add #:schema and honor it.  Make
/var/guix/profiles and /var/guix/gcroots.
* gnu/build/vm.scm (root-partition-initializer): Pass
 #:reset-timestamps? to 'register-closure'.
* gnu/system/vm.scm (not-config?): New procedure.
(guile-sqlite3&co): New variable.
(expression->derivation-in-linux-vm)[config]: New variable.
[builder]: Use 'with-extensions'.
(iso9660-image)[schema, config]: New variables.
Wrap build expression in 'with-extensions'; add 'sql-schema' call.
Remove GUIX from INPUTS.
(qemu-image)[schema, config]: New variables.
Wrap body in 'with-extensions'.
(system-docker-image)[not-config?]: Remove.
[config]: Use 'make-config.scm'.
[schema]: New variable.
[build]: Use 'with-extensions'.  Add call to 'sql-schema'.  Remove GUIX
from INPUTS.
* gnu/system/file-systems.scm (%store-prefix): Check whether
'%store-prefix' is defined.
* guix/scripts/pack.scm (self-contained-tarball)[not-config?]
[libgcrypt, schema]: New variables.
[build]: Wrap in 'with-extensions'.  Adjust imported module list to use
'make-config.scm' for (guix config).
2018-06-14 11:16:59 +02:00
Ludovic Courtès 49c393ccaa
database: 'reset-timestamps' sets file permissions as well.
* guix/store/database.scm (reset-timestamps): Add 'chmod' calls.
2018-06-14 11:16:59 +02:00
Ludovic Courtès 122a6cad7d
database: Replace existing entries in Refs.
* guix/store/database.scm (add-reference-sql): Add "OR REPLACE".
2018-06-14 11:16:59 +02:00
Ludovic Courtès 4bd86f0d62
database: Add #:reset-timestamps? to 'register-path'.
* guix/store/database.scm (register-path): Add #:reset-timestamps? and
honor it.
2018-06-14 11:16:59 +02:00
Ludovic Courtès b85e2ff484
database: Remove extra SQL parameter in 'update-or-insert'.
* guix/store/database.scm (update-or-insert): Remove extra #:path
parameter.
2018-06-14 11:16:59 +02:00
Ludovic Courtès 0d0438ed8c
deduplicate: Fix a couple of thinkos.
* guix/store/deduplication.scm (get-temp-link): Turn 'args' in the 'catch'
handler into a rest argument.
(deduplicate): Use 'lstat' instead of 'file-is-directory?' to properly
handle symlinks.  When iterating over the result of 'scandir', exclude
the ".links" sub-directory.
* tests/store-deduplication.scm ("deduplicate"): Create sub-directories
and call 'deduplicate' directly on STORE.
2018-06-14 11:16:59 +02:00
Ludovic Courtès 866ee8c66a
database: 'register-path' creates the database directory if needed.
* guix/store/database.scm (register-path): Call 'mkdir-p'.
2018-06-14 11:16:59 +02:00
Ludovic Courtès 33fddb763a
database: Provide a way to specify the schema location.
* guix/store/database.scm (sqlite-register): Add #:schema.  Parameterize
'sql-schema' based on this.
(register-path): Add #:schema and pass it to 'sqlite-register'.
2018-06-14 11:16:59 +02:00
Ludovic Courtès 6892f0a247
store-copy: 'read-reference-graph' returns a list of records.
The previous implementation of 'read-reference-graph' was good enough
for many use cases, but it discarded the graph structure, which is
useful information in some cases.

* guix/build/store-copy.scm (<store-info>): New record type.
(read-reference-graph): Rewrite to return a list of <store-info>.
(closure-size, populate-store): Adjust accordingly.
* gnu/services/base.scm (references-file): Adjust accordingly.
* gnu/system/vm.scm (system-docker-image): Likewise.
* guix/scripts/pack.scm (squashfs-image, docker-image): Likewise.
* tests/gexp.scm ("gexp->derivation #:references-graphs"): Likewise.
2018-06-14 11:16:58 +02:00
Ludovic Courtès f8f9f7cabc
database: Fail registration when encountering unregistered references.
* guix/store/database.scm (add-reference-sql): Remove nested SELECT.
(add-references): Expect REFERENCES to be a list of ids.
(sqlite-register): Call 'path-id' for each of REFERENCES and pass it to
'add-references'.
* tests/store-database.scm ("register-path with unregistered references"):
New test.
2018-06-14 11:16:58 +02:00
Ludovic Courtès 3931c76154
database: 'with-database' can now initialize new databases.
* nix/libstore/schema.sql: Rename to...
* guix/store/schema.sql: ... this.
* Makefile.am (nobase_dist_guilemodule_DATA): Add it.
* nix/local.mk (%D%/libstore/schema.sql.hh): Adjust accordingly.
* guix/store/database.scm (sql-schema): New variable.
(sqlite-exec, initialize-database, call-with-database): New procedures.
(with-database): Rewrite in terms of 'call-with-database'.
* tests/store-database.scm ("new database"): New test.
* guix/self.scm (compiled-guix)[*core-modules*]: Add 'schema.sql' to
 #:extra-files.
2018-06-14 11:16:58 +02:00
Ludovic Courtès e2f8be0664
pull: Add '--list-generations'.
* guix/scripts/pull.scm (show-help, %options): Add '--list-generations'.
(display-profile-content, process-query): New procedures.
(guix-pull): Honor '--list-generations'.
2018-06-13 23:41:21 +02:00
Oleg Pykhalov 38212ff7b9
import: utils: Import more dependencies.
* guix/import/utils.scm (recursive-import): Import more dependencies.
2018-06-12 19:51:03 +03:00
Ludovic Courtès 2bf9351e31
substitute: Make progress message shorter.
* guix/scripts/substitute.scm (fetch-narinfos)[update-progress!]:
Shorten progress message so it fits on 80 columns.
2018-06-12 15:23:34 +02:00
Ludovic Courtès 4c97a368a6
substitute: Erase the current line when reporting progress.
* guix/scripts/substitute.scm (fetch-narinfos)[update-progress!]: Use
the ANSI erase-current-line sequence next to \r.
2018-06-12 15:23:34 +02:00
Ludovic Courtès a708de151c
offload: Honor the build timeout internally.
* guix/scripts/offload.scm (call-with-timeout): New procedure.
(with-timeout): New macro.
(process-request): Use it around 'transfer-and-offload' call.
2018-06-11 15:19:01 +02:00
Jelle Licht 3edf0d53a4
import: json: Consolidate duplicate json-fetch functionality.
* guix/import/json.scm (json-fetch): Return a list or hash table.
  (json-fetch-alist): New procedure.
* guix/import/github.scm (json-fetch*): Remove.
  (latest-released-version): Use json-fetch.
* guix/import/cpan.scm (module->dist-name): Use json-fetch-alist.
  (cpan-fetch): Likewise.
* guix/import/crate.scm (crate-fetch): Likewise.
* guix/import/gem.scm (rubygems-fetch): Likewise.
* guix/import/pypi.scm (pypi-fetch): Likewise.
* guix/import/stackage.scm (stackage-lts-info-fetch): Likewise.
2018-06-10 22:15:12 +02:00
Ludovic Courtès 77a1aac6cc
pull: Record the URL, branch, and commit as a manifest entry property.
* guix/scripts/pull.scm (derivation->manifest-entry): Turn COMMIT into a
keyword parameter; add #:url and #:branch.  Add a 'source' property to
the manifest entry.
(build-and-install): Add #:url and #:branch and pass it to
'derivation->manifest-entry'.
(guix-pull): Adjust accordingly.
2018-06-09 12:02:28 +02:00
Ludovic Courtès f6f2346f9b
profiles: Add 'properties' field to manifest entries.
* guix/profiles.scm (<manifest-entry>)[properties]: New field.
(manifest->gexp)[entry->gexp]: Serialize it.
(sexp->manifest)[sexp->manifest-entry]: Deserialize it.
2018-06-09 12:02:28 +02:00
Ludovic Courtès c423ae8918
packages: Add 'package-patched-vulnerabilities'.
* guix/packages.scm (patch-file-name): New procedure.
(%vulnerability-regexp): New variable.
(package-patched-vulnerabilities): New procedure.
* guix/scripts/lint.scm (patch-file-name): Remove.
(check-vulnerabilities): Adjust to use
'package-patched-vulnerabilities'.
* tests/packages.scm ("package-patched-vulnerabilities"): New test.
2018-06-09 12:02:28 +02:00
Ludovic Courtès efcb4441f1
profiles: Add '%current-profile', 'user-friendly-profile', & co.
* guix/scripts/package.scm (%user-profile-directory)
(%profile-directory, %current-profile, canonicalize-profile)
(user-friendly-profile): Move to...
* guix/profiles.scm: ... here.
2018-06-09 12:02:28 +02:00
Ludovic Courtès 24cb66d18e
ui: Avoid #:select'ing bindings introduced in the latest (guix build utils).
This should allow 'guix pull' to complete even when invoked from a Guix
that predates commit 5d669883ec.

* guix/ui.scm: Use #:hide instead of #:select.  This is a followup to
5d669883ec.
2018-06-09 12:02:28 +02:00
Ludovic Courtès 4554d4c8a9
self: Build the Info manual.
* guix/self.scm (info-manual): New procedure.
(whole-package): Add #:info and honor it.
(compiled-guix): Pass #:info.
2018-06-09 12:02:28 +02:00
Ludovic Courtès 9f1c3559b0
self: Compute and use locale data.
* guix/self.scm (sub-directory, locale-data): New procedures.
(guix-command): Add SOURCE parameter.  Call 'locale-data' when SOURCE is
true and use it in staged 'bindtextdomain' calls.
(whole-package): Add #:command and honor it.
(compiled-guix): Pass #:command to 'whole-package'.
2018-06-09 12:02:27 +02:00
Ludovic Courtès 75e24d7b0e
pull: Install the new Guix in a profile.
* guix/scripts/pull.scm (%pull-version): New variable.
(build-from-source): Pass #:pull-version to BUILD.
(whole-package-for-legacy, derivation->manifest-entry): New procedure.
(build-and-install): Rewrite in terms of 'build-and-use-profile'.
* guix/scripts/system.scm (maybe-suggest-running-guix-pull)[latest]:
Switch to "/current".
* scripts/guix.in (augment-load-paths!): Remove use of
~/.config/guix/latest.
* build-aux/compile-as-derivation.scm: Replace "/guix/latest/" with
"/current/share/guile/site/X.Y"
* guix/scripts.scm (warn-about-old-distro)[age]: Check "/current"
instead of "/latest".
* doc/guix.texi (Invoking guix pull): Document it.
* doc/contributing.texi (Running Guix Before It Is Installed): Remove
footnote about abusing ~/.config/guix/latest.
2018-06-09 12:02:27 +02:00
Ludovic Courtès 8a0d9bc8a3
self: Produce a complete package with the 'guix' command.
* guix/self.scm (guix-command): New procedure.
(compiled-guix): Add #:pull-version parameter.
[command, package]: New variables.
Honor PULL-VERSION.
(guix-derivation): Add #:pull-version and pass it to 'compiled-guix'.
* build-aux/build-self.scm (build-program): Add #:pull-version
parameter.  Pass it to 'guix-derivation'.
(build): Add #:pull-version and pass it to 'build-program'.
* build-aux/compile-as-derivation.scm: Pass #:pull-version to BUILD.
2018-06-09 12:02:27 +02:00
Oleg Pykhalov 62d78ec076
import: elpa: Remove unused (gnu packages) module.
* guix/import/elpa.scm: Remove unused (gnu packages) module.
2018-06-08 17:05:18 +03:00
Ludovic Courtès 9953685c09
config: Remove 'canonicalize-path' call.
The call was unnecessary and would cause test failures because
'test-tmp/db' does not exist initially.

* guix/config.scm.in (%store-database-directory): Remove
'canonicalize-path' call.
2018-06-08 15:23:39 +02:00
Oleg Pykhalov 74032da3a2
import: elpa: Add recursive import.
* doc/guix.texi (Invoking guix import): Document elpa recursive import.
* guix/import/elpa.scm (elpa-package->sexp): Return package and
dependencies values.
(elpa-guix-name, elpa-recursive-import): New procedures.
* guix/scripts/import/elpa.scm (show-help, %options): Add recursive
option.
(guix-import-elpa): Use 'elpa-recursive-import'.
2018-06-08 14:58:33 +03:00
Oleg Pykhalov ae9e5d6602
import: utils: Add recursive-import.
* guix/import/cran.scm (cran-guix-name, cran-recursive-import): New
procedures.
(recursive-import): Remove procedure.
* guix/import/utils.scm (guix-name, recursive-import): New procedures.
* guix/scripts/import/cran.scm (guix-import-cran): Use
'cran-recursive-import' procedure.
2018-06-08 14:58:33 +03:00
Ricardo Wurmus 66ece08d05
Merge branch 'master' into core-updates 2018-06-05 09:59:27 +02:00
Ricardo Wurmus 0ebef06dbe
build-system/r: Update to Bioconductor 3.7.
This is a follow-up to 41f17554d8.

* guix/build-system/r.scm (bioconductor-uri): Update to version 3.7.
2018-06-05 09:58:52 +02:00
Mark H Weaver 0c0431f9ce
Merge branch 'master' into core-updates 2018-06-03 03:36:47 -04:00
Ludovic Courtès 8292f5a9c5
self: Do not build (guix man-db).
* guix/self.scm (specification->package): Remove "guile-gdbm-ffi" and
"guile2.0-gdbm-ffi".
(compiled-guix)[guile-gdbm-ffi]: Remove.
[dependencies]: Remove it.
[*core-modules*]: Add "guix/man-db.scm" via #:extra-files.
[*extra-modules*]: Exclude "guix/man-db.scm".
2018-06-02 16:02:51 +02:00
Ricardo Wurmus e0f8970357
Merge branch 'master' into core-updates 2018-06-02 13:44:43 +02:00
Ricardo Wurmus 41f17554d8
import: cran: Update to Bioconductor 3.7.
* guix/import/cran.scm (%bioconductor-version): Update to 3.7.
2018-06-02 13:39:13 +02:00
Ludovic Courtès 1458f768c1
self: Include gnu/build/* in the result.
Previously, modules like gnu/build/cross-toolchain.scm or
gnu/build/svg.scm were missing from the result.

* guix/self.scm (compiled-guix)[*system-modules*]: Add gnu/build/* to
 #:extra-files.
(imported-files)[same-target?]: New procedure.
[build]: Call 'delete-duplicates' on FILES.
2018-06-02 00:43:49 +02:00
Ludovic Courtès 8031b3fa3c
self: 'compiled-files' builds the given list of files.
* guix/self.scm (compiled-files): Add 'module-files' parameter.
[build]: 'process-directory' now honors MODULE-FILES instead of
building any '.scm' file it sees.
(scheme-node): Adjust accordingly.
2018-06-02 00:43:49 +02:00
Ludovic Courtès e3a87d770f
self: Improve backtraces for 'imported-files'.
* guix/self.scm (imported-files): Pass #:env-vars.
2018-06-02 00:43:49 +02:00
Ludovic Courtès a13c1bf4ca
Merge branch 'master' into core-updates 2018-06-01 23:41:40 +02:00
Ludovic Courtès 54be2b4d75
self: Show backtraces on more columns.
* guix/self.scm (compiled-modules): Add "COLUMNS" to #:env-vars.
2018-06-01 18:41:45 +02:00
Ludovic Courtès 6d52844cd4
self: Add dependency on guile-gdbm-ffi.
Fixes a regression introduced in
331ac4cc23 whereby "guile-gdbm-ffi" would
now be mandatory.

* guix/self.scm (specification->package): Add "guile-gdbm-ffi" and
"guile2.0-gdbm-ffi".
(compiled-guix)[guile-gdbm-ffi]: New variables.
[dependencies]: Add it.
2018-06-01 18:41:45 +02:00
Caleb Ristvedt bf5bf5778c
Add (guix store deduplication).
* guix/store/database.scm (register-path): Add #:deduplicate? and call
'deduplicate' when it's true.
(counting-wrapper-port, nar-sha256): Move to...
* guix/store/deduplication.scm: ... here.  New file.
* tests/store-deduplication.scm: New file.
* Makefile.am (STORE_MODULES): Add deduplication.scm.
(SCM_TESTS) [HAVE_GUILE_SQLITE3]: Add store-deduplication.scm.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 15:35:54 +02:00
Ludovic Courtès 285cc75c31
database: 'register-path' resets timestamps.
* guix/store/database.scm (reset-timestamps): New procedure.
(register-path): Use it.
2018-06-01 15:35:45 +02:00
Caleb Ristvedt 7f9d184d9b
Add (gnu store database).
* guix/config.scm.in (%store-database-directory): New variable.
* guix/store/database.scm: New file.
* tests/store-database.scm: New file.
* Makefile.am (STORE_MODULES): New variable.
(MODULES, MODULES_NOT_COMPILED): Adjust accordingly.
(SCM_TESTS) [HAVE_GUILE_SQLITE3]: Add tests/store-database.scm.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 15:35:32 +02:00
Ludovic Courtès d59e75f3b5
build: Check for Guile-SQLite3.
* m4/guix.m4 (GUIX_CHECK_GUILE_SQLITE3): New macro.
* configure.ac: Use it and define 'HAVE_GUILE_SQLITE3'.
* guix/self.scm (specification->package): Add "guile-sqlite3".
(compiled-guix)[guile-sqlite3]: New variable.
[dependencies]: Add it.
2018-06-01 15:35:15 +02:00
Ludovic Courtès 331ac4cc23
profiles: Use 'with-extensions'.
* guix/profiles.scm (manual-database)[build]: Use 'with-extensions'.
Remove 'add-to-load-path' call.
* guix/man-db.scm: Use (gdbm) the normal way; remove 'module-autoload!'
call.
2018-06-01 15:21:28 +02:00
Ludovic Courtès 13993c77fe
pack: Use 'with-extensions' when referring to (guix docker).
* guix/docker.scm: Use module (json) the normal way.
* guix/scripts/pack.scm (docker-image)[build]: Wrap in
'with-extensions'.
2018-06-01 15:21:28 +02:00
Ludovic Courtès 838e17d805
gexp: Add 'with-extensions'.
* guix/gexp.scm (<gexp>)[extensions]: New field.
(gexp-attribute): New procedure.
(gexp-modules): Write in terms of 'gexp-attribute'.
(gexp-extensions): New procedure.
(gexp->derivation): Add #:effective-version.
[extension-flags]: New procedure.
Honor extensions of EXP.
(current-imported-extensions): New syntax parameter.
(with-extensions): New macro.
(gexp): Honor CURRENT-IMPORTED-EXTENSIONS.
(compiled-modules): Add #:extensions and honor it.
(load-path-expression): Likewise.
(gexp->script, gexp->file): Honor extensions.
* tests/gexp.scm (%extension-package): New variable.
("gexp-extensions & ungexp")
("gexp-extensions & ungexp-splicing")
("gexp-extensions and literal Scheme object")
("gexp->derivation & with-extensions")
("program-file & with-extensions"): New tests.
* doc/guix.texi (G-Expressions): Document 'with-extensions'.
2018-06-01 15:20:54 +02:00
Ludovic Courtès 5d669883ec
gexp: 'compiled-modules' no longer overrides (guix build utils).
Until now 'compiled-modules' would override (guix build utils) with its
own.  Thus, when asked to build a different (guix build utils),
via #:module-path, it would fail badly because a (guix build utils)
module was already loaded and possibly incompatible with the new one.

This happened when running 'guix pull --branch=core-updates' from
current master: in 'core-updates', (guix build utils) exports
'ignore-error?' but in 'master' it does not.  Thus, 'guix pull' would
fail with:

  no binding `invoke-error?' in module (guix build utils)
  builder for `/gnu/store/…-module-import-compiled.drv' failed with exit code 1
  cannot build derivation `/gnu/store/…-compute-guix-derivation.drv': 1 dependencies couldn't be built

This patch fixes it.

* guix/gexp.scm (compiled-modules)[build-utils-hack?]: New variable.
[build]: Load MODULES/build/utils.scm when it exists.
2018-06-01 13:50:27 +02:00
Mathieu Othacehe 8fc3a971b0
scripts: system: Sort profile generations in reverse order.
* guix/scripts/system.scm (profile-boot-parameters): Reverse
generation-numbers list. This allows old generations to be listed from most
recent to oldest in bootloaders configuration files.
2018-06-01 09:40:07 +02:00
Ludovic Courtès 9768848af8
records: Make a couple of procedures available at expansion time.
* guix/records.scm (current-abi-identifier, abi-check): Wrap in
'eval-when'.
2018-05-31 18:13:08 +02:00