dfb403b053
doc: Fix typo.
...
* doc/guix.texi (DNS Services): Fix knot-configuration.
2017-12-15 12:47:28 +03:00
86637f18be
gnu: ruby: Replace with ruby-2.4.3 [fixes CVE-2017-17405].
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* gnu/packages/ruby.scm (ruby-2.4.3): New variable.
(ruby)[replacement]: New field.
2017-12-15 13:56:51 +10:00
6098a386a9
gnu: bedtools: Update to 2.27.1.
...
* gnu/packages/ruby.scm (bedtools): Update to 2.27.1.
2017-12-15 13:56:51 +10:00
263c56d293
gnu: ruby-2.2: Update to 2.2.9 [fixes CVE-2017-17405].
...
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.9.
2017-12-15 13:56:51 +10:00
2713e399ee
gnu: ruby-2.3: Update to 2.3.6 [fixes CVE-2017-17405].
...
* gnu/packages/ruby.scm (ruby-2.3): Update to 2.3.6.
2017-12-15 13:56:50 +10:00
86383d6746
gnu: yoshimi: Update to 1.5.5.
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* gnu/packages/music.scm (yoshimi): Update to 1.5.5.
2017-12-15 00:00:34 +01:00
1bc147d609
guix: ant-build-system: Do not compress jars.
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Fixes <https://bugs.gnu.org/29700 >.
* guix/build/ant-build-system.scm (strip-jar-timestamps): Do not compress jar
when repacking.
2017-12-15 00:00:34 +01:00
e536b1d308
gnu: s-shell: Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659.
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* gnu/packages/shells.scm (s-shell): Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659.
[version]: Use 'git-version'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14 18:26:25 +01:00
a0ec2d256d
gnu: xpra: Update to 2.2.
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* gnu/packages/xorg.scm (xpra): Update to 2.2.
[inputs]: Add python2-netifaces and python2-pyopengl-accelerate. Fix
position of commas.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14 18:26:25 +01:00
97c26793d9
gnu: Add python2-pyopengl-accelerate.
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* gnu/packages/python.scm (python2-pyopengl-accelerate): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14 18:26:25 +01:00
8a6cd65a2a
gnu: python-scikit-learn: Patch test non-determinism.
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* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch:
New file.
* gnu/packages/machine-learning.scm (python-scikit-learn)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-12-14 22:50:19 +10:00
4e0b3583ea
gnu: diamond: Update to 0.9.14.
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* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.14.
2017-12-14 22:50:10 +10:00
aa29f8fb02
gnu: gucharmap: Use glib-or-gtk-build-system.
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* gnu/packages/gnome.scm (gucharmap): Use glib-or-gtk-build-system.
2017-12-14 11:09:26 +01:00
35e86e3605
gnu: Erlang: Update to 20.1.7 [fixes CVE-2017-1000385].
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* gnu/packages/erlang.scm (erlang): Update to 20.1.7
(native-inputs): Use version-major+minor in the URI of erlang-manpages.
2017-12-13 19:51:00 -05:00
4a699769fd
gnu: youtube-dl: Update to 2017.12.14.
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* gnu/packages/video.scm (youtube-dl): Update to 2017.12.14.
2017-12-14 00:18:16 +01:00
a135b3ddfe
gnu: r-caret: Update to 6.0-78.
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* gnu/packages/statistics.scm (r-caret): Update to 6.0-78
2017-12-14 00:18:16 +01:00
5ac4bd9c0a
gnu: r-domc: Update to 1.3.5.
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* gnu/packages/statistics.scm (r-domc): Update to 1.3.5
2017-12-14 00:18:15 +01:00
a2460e0f6b
gnu: perl-text-bibtex: Update to 0.85.
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* gnu/packages/tex.scm (perl-text-bibtex): Update to 0.85
2017-12-14 00:18:15 +01:00
1d1f1b3a6e
gnu: perl-test-requires: Update to 0.10.
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* gnu/packages/perl-check.scm (perl-test-requires): Update to 0.10
2017-12-14 00:18:14 +01:00
9210fdf8b7
gnu: perl-test-pod: Update to 1.51.
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* gnu/packages/perl-check.scm (perl-test-pod): Update to 1.51
[source]: Update URI.
2017-12-14 00:17:39 +01:00
ab998d5e93
gnu: perl-test-mocktime: Update to 0.15.
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* gnu/packages/perl-check.scm (perl-test-mocktime): Update to 0.15
[propagated-inputs]: Add perl-time-piece.
2017-12-14 00:05:15 +01:00
da43edbe0f
gnu: Add perl-time-piece.
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* gnu/packages/perl.scm (perl-time-piece): New public variable.
2017-12-14 00:05:15 +01:00
e2e6e9ebf0
hydra: Pre-load the compiler.
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Starting from Guile 2.2.3, '%fresh-auto-compile' does what it says and
would auto-compile everything, including the compiler (see
<https://bugs.gnu.org/29226 >).
* build-aux/hydra/gnu-system.scm: Call 'compile'.
2017-12-13 23:11:54 +01:00
34797d8afc
hydra: Invalidate derivation caches after each architecture evaluation.
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This reduces max RSS from 1.3G to 1.0G.
* guix/derivations.scm (invalidate-derivation-caches!): New procedure.
* build-aux/hydra/gnu-system.scm (hydra-jobs): Use it. Add 'format'
call.
2017-12-13 23:11:53 +01:00
d1f01e4845
memoization: Add 'invalidate-memoization!.
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* guix/memoization.scm (%make-hash-table*): When not profiling, add the
new table to %MEMOIZATION-TABLES.
(invalidate-memoization!): New procedure.
2017-12-13 23:11:53 +01:00
90354e34e3
derivations: Don't memoize 'derivation-hash'.
...
This has little or no run-time impact and slightly reduces the memory
footprint.
* guix/derivations.scm (derivation-hash): Replace 'mlambda' with
'lambda'.
2017-12-13 23:11:53 +01:00
eb1150c22c
derivations: Split 'derivation-hash' in two procedures.
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* guix/derivations.scm (derivation/masked-inputs): New procedure.
(derivation-hash): Use it instead of the inline code.
2017-12-13 23:11:53 +01:00
d738f134e4
gnu: notmuch: Move elisp directory and generate autoloads.
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* gnu/packages/mail.scm (notmuch)[arguments]: Move elisp files to
share/emacs/site-lisp/guix.d/notmuch-<version>.
Add make-autoloads phase.
2017-12-13 23:49:14 +05:30
cc6a4b0386
pull: Add (guix profiling) to the build environment.
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Reported by Ricardo Wurmus.
* build-aux/build-self.scm (build): Add (guix profiling).
2017-12-13 17:16:40 +01:00
22358bdb7c
Revert "derivations: 'derivation-hash' assumes inputs are coalesced."
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This reverts commit 1d008d9f8chttps://bugs.gnu.org/29689 >.
2017-12-13 15:13:38 +01:00
c2c5b115ab
gnu: polyml: Update to 5.7.1.
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* gnu/packages/sml.scm (polyml): Update to 5.7.1.
2017-12-13 14:18:51 +01:00
4168ddf689
gnu: guile-gdbm-ffi: Install documentation.
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* gnu/packages/guile.scm (guile-gdbm-ffi)[arguments]: Install README.md and
some examples. Tidy up MKDIR-P calls.
2017-12-13 13:15:47 +01:00
57202f2e24
gnu: gtksourceview: Update to 3.24.6.
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* gnu/packages/gtk.scm (gtksourceview): Update to 3.24.6
2017-12-13 13:15:47 +01:00
7b307a21dd
vm: Use qemu drive device parameter.
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* gnu/build/vm.scm (load-in-linux-vm): Use device parameter to define drive
device.
2017-12-13 11:30:04 +01:00
91b21ba9f7
gnu: cgit: Patch absolute file names.
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* gnu/packages/version-control.scm (cgit): Patch absolute file names.
2017-12-13 05:15:21 +03:00
40761f57ad
gnu: Add krita.
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* gnu/packages/kde.scm (krita): New variable.
Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2017-12-12 21:00:27 -05:00
27c50d87f5
doc: Fix typo.
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* doc/guix.texi: Add missing ‘@*’ to copyright headers.
2017-12-12 22:35:37 +01:00
a7ebe9dc39
gnu: xfig: Update to 3.2.6a.
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* gnu/packages/xfig.scm (xfig): Update to 3.2.6a.
[native-inputs]: Remove groff, imake, makedepend. Add desktop-file-utils.
[inputs]: Remove libxmu and zlib.
[arguments]: Remove custom phases. Add a ‘strip-bogus-exec-prefix’ phase.
Run the rudimentary test suite.
2017-12-12 22:34:29 +01:00
64bae7237c
gnu: services: Add php-fpm.
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* gnu/services/web.scm (<php-fpm-configuration>,
<php-fpm-process-manager-configuration>): New record types.
(php-fpm-configuration?,
php-fpm-process-manager-configuration?,
php-fpm-service-type,
nginx-php-location): New procedures.
* doc/guix.texi (Web-Services): Document php-fpm service.
* gnu/tests/web.scm: Add php-fpm system test.
Signed-off-by: Christopher Baines <mail@cbaines.net>
2017-12-12 21:29:39 +00:00
e05cc6b802
gnu: meson: Update to 0.44.0.
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* gnu/packages/build-tools.scm (meson): Update to 0.44.0
2017-12-12 20:30:19 +01:00
1e000f176f
gnu: miniupnpc: Update to 2.0.20171212.
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* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.20171212.
2017-12-12 20:28:08 +01:00
cbf5eb84ef
gnu: global: Update to 6.6.
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* gnu/packages/code.scm (global): Update to 6.6.
2017-12-12 20:47:17 +02:00
1d008d9f8c
derivations: 'derivation-hash' assumes inputs are coalesced.
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* guix/derivations.scm (derivation-hash): Remove
redundant 'coalesce-duplicate-inputs' call.
2017-12-12 18:11:22 +01:00
3d19b7fbc2
derivations: Use 'define-immutable-record-type' as appropriate.
...
This is a followup to dc673fa113
2017-12-12 18:11:22 +01:00
6c80641d54
memoization: Profiling support keeps track of lookups and hits.
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* guix/memoization.scm (<cache>): New record type.
(define-lookup-procedure, define-update-procedure): New macros.
(cache-ref, cacheq-ref, cache-set!, cacheq-set!): New procedures.
(cached/mv, cachedq/mv, cached, cachedq): Use them instead of 'hash-ref'
and 'hash-set!'.
(%make-hash-table*): When 'profiled?' returns true, return a <cache>
object.
(define-cache-procedure): Adjust to show cache lookups and hits.
2017-12-12 18:11:22 +01:00
252c408377
memoization: Add profiling support.
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* guix/memoization.scm (%memoization-tables): New variable.
(%make-hash-table*, show-memoization-tables): New procedures.
(make-hash-table*): New macro.
Add top-level call to 'register-profiling-hook!'.
(memoize): Adjust to pass the resulting procedure to
'make-hash-table*'.
(%mlambda): Likewise.
2017-12-12 18:11:22 +01:00
03870da819
Add (guix profiling).
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* guix/profiling.scm: New file.
* Makefile.am (MODULES): Add it.
* guix/store.scm (record-operation): Use 'profiled?' and
'register-profiling-hook!'.
2017-12-12 18:11:22 +01:00
6e119bad60
gnu: xfig, transfig: Update home pages.
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* gnu/packages/xfig.scm (xfig, transfig)[home-page]: Use SourceForge.net.
2017-12-12 05:12:14 +01:00
cc3ac162c5
gnu: Add uthash.
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* gnu/packages/datastructures.scm (uthash): New public variable.
2017-12-12 05:12:13 +01:00
8d8d227bbb
gnu: Add fbcat.
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* gnu/packages/linux.scm (fbcat): New public variable.
2017-12-12 05:12:13 +01:00
Oleg Pykhalov