Commit Graph

13538 Commits

Author SHA1 Message Date
Ludovic Courtès 9e485ffa1b
gnu: kcrash: Work around race condition when starting Xvfb.
Sometimes tests would start running before Xvfb is listening.
See <https://hydra.gnu.org/build/1750201>.

* gnu/packages/kde-frameworks.scm (kcrash)[arguments]: In
'start-xorg-server', add 'sleep' call after starting Xvfb.  Pass "Xvfb"
to 'system' instead of its absolute file name.
2017-01-11 11:23:41 -05:00
Leo Famulari dca73a742c
Revert "gnu: nss: Add comment about test failures in NSS 3.27.2"
This reverts commit 4f6ff977c2.
2017-01-11 11:23:39 -05:00
Efraim Flashner 5a52e86eb4
gnu: cairomm: Update to 1.12.2.
* gnu/packages/gtk.scm (cairomm): Update to 1.12.2.
[source]: Download from cairographics.org.
[home-page]: Use https.
2017-01-11 11:23:37 -05:00
Efraim Flashner b3822954ea
gnu: cairo: Update to 1.14.8.
* gnu/packages/gtk.scm (cairo): Update to 1.14.8.
[source]: Use https.
[home-page]: Use https.
2017-01-11 11:23:36 -05:00
Efraim Flashner 16f6ee9932
gnu: harfbuzz: Update to 1.3.4.
* gnu/packages/gtk.scm (harfbuzz): Update to 1.3.4.
2017-01-11 11:23:34 -05:00
Efraim Flashner 51f0592fbf
gnu: poppler: Update to 0.50.0.
* gnu/packages/pdf.scm (poppler): Update to 0.50.0.
2017-01-11 11:23:32 -05:00
Efraim Flashner f8489f160b
gnu: cups-filters: Update to 1.13.1.
* gnu/packages/cups.scm (cups-filters): Update to 1.13.1.
[inputs]: Switch libjpeg-8 to libjpeg.
[arguments]: Disable driverless printing, set location for bash shell.
2017-01-11 11:23:30 -05:00
David Thompson b4c8c413ca
gnu: mesa: Enable floating point textures.
* gnu/packages/gl.scm (mesa): Add --enable-texture-float to configure flags.
2017-01-11 11:23:29 -05:00
Marius Bakke 5e107b22df
gnu: libxpm: Update to 3.5.12.
* gnu/packages/xorg.scm (libxpm): Update to 3.5.12.
2017-01-11 11:23:27 -05:00
Tobias Geerinckx-Rice 45e38a07eb
gnu: kmod: Update to 23.
* gnu/packages/linux.scm (kmod): Update to 23.
2017-01-11 11:23:25 -05:00
John Darrington 54d8d0fef1
gnu: Patch libxt's default search path.
* gnu/packages/patches/libxt-guix-search-paths.patch: New file.
* gnu/packages/xorg.scm (libxt) [source]: Add patch.
2017-01-11 11:23:23 -05:00
Ludovic Courtès 69323016d3
services: wicd: Create /var/run/wpa_supplicant.
* gnu/services/networking.scm (%wicd-activation): Create
/var/run/wpa_supplicant.
2017-01-11 11:16:14 +01:00
Leo Famulari 7b903a920c
gnu: eyed3: Update to 0.7.10.
* gnu/packages/mp3.scm (eyed3): Update to 0.7.10.
2017-01-11 00:48:48 -05:00
Leo Famulari 541b3f59ae
gnu: beets: Update to 1.4.3.
* gnu/packages/music.scm (beets): Update to 1.4.3.
2017-01-11 00:48:47 -05:00
Leo Famulari 653439c6b1
gnu: python-mutagen: Update to 1.36.
* gnu/packages/music.scm (python-mutagen, python2-mutagen): Update to 1.36.
2017-01-11 00:48:44 -05:00
Kei Kebreau 2fbc004f43
gnu: moc: Update to 2.5.2.
* gnu/packages/music.scm (moc): Update to 2.5.2.
[source](modules, snippet): Remove timestamps from the output.
2017-01-10 20:30:28 -05:00
Leo Famulari b0a567640c
gnu: cracklib: Fix buffer overflow.
* gnu/packages/patches/cracklib-fix-buffer-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/password-utils.scm (cracklib)[source]: Use it.
2017-01-10 17:52:42 -05:00
Leo Famulari 4b96149d8b
gnu: libtiff: Fix CVE-2016-{10092,10093,10094} and others.
* gnu/packages/patches/libtiff-CVE-2016-10092.patch,
gnu/packages/patches/libtiff-CVE-2016-10093.patch,
gnu/packages/patches/libtiff-CVE-2016-10094.patch,
gnu/packages/patches/libtiff-assertion-failure.patch,
gnu/packages/patches/libtiff-divide-by-zero-ojpeg.patch,
gnu/packages/patches/libtiff-divide-by-zero-tiffcp.patch,
gnu/packages/patches/libtiff-divide-by-zero-tiffcrop.patch,
gnu/packages/patches/libtiff-divide-by-zero.patch,
gnu/packages/patches/libtiff-heap-overflow-pixarlog-luv.patch,
gnu/packages/patches/libtiff-heap-overflow-tif-dirread.patch,
gnu/packages/patches/libtiff-heap-overflow-tiffcp.patch,
gnu/packages/patches/libtiff-heap-overflow-tiffcrop.patch,
gnu/packages/patches/libtiff-invalid-read.patch,
gnu/packages/patches/libtiff-null-dereference.patch,
gnu/packages/patches/libtiff-tiffcp-underflow.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[replacement]: New field.
(libtiff/fixed): New variable.
2017-01-10 17:52:42 -05:00
Marius Bakke 8966c6b439
gnu: notmuch: Update to 0.23.5.
* gnu/packages/mail.scm (notmuch, python2-notmuch): Update to 0.23.5.
2017-01-10 23:42:38 +01:00
Marius Bakke 0d11a69f30
gnu: xapian: Update to 1.4.2.
* gnu/packages/search.scm (xapian): Update to 1.4.2.
2017-01-10 23:42:38 +01:00
Ludovic Courtès 3c0f7910e4
gnu: gnutls: Replace with 3.5.8 [fixes GNUTLS-SA-2017-{1,2}].
* gnu/packages/tls.scm (gnutls-3.5.8): New variable.
(gnutls)[replacement]: New field.
2017-01-10 23:40:33 +01:00
Marius Bakke 88f2dd1ddf
gnu: rofi: Update to 1.3.1.
* gnu/packages/xdisorg.scm (rofi): Update to 1.3.1.
2017-01-10 22:35:05 +01:00
Ludovic Courtès 39dc70323c
gnu: youtube-dl: Update to 2017.01.10.
* gnu/packages/video.scm (youtube-dl): Update to 2017.01.10.  Change
URLs to yt-dl.org.
2017-01-10 22:15:27 +01:00
Ludovic Courtès 082be6d2a1
gnu: e2fsprogs: Remove timestamp from 'libext2fs.info.gz'.
* gnu/packages/linux.scm (e2fsprogs)[source](snippet): Patch
'doc/Makefile.in' to use the '-n' option of gzip.
2017-01-10 22:15:26 +01:00
Ludovic Courtès 74d212911e
gnu: e2fsprogs: Use symlinks instead of hard links.
* gnu/packages/linux.scm (e2fsprogs)[arguments]: Pass
"--enable-symlink-install".
2017-01-10 22:15:26 +01:00
Leo Famulari 6d3e08d4e8
gnu: Add sysstat.
* gnu/packages/linux.scm (sysstat): New variable.
2017-01-10 13:38:35 -05:00
Tobias Geerinckx-Rice d4acb6db2f
gnu: python-click: Update to 6.7.
* gnu/packages/python.scm (python-click): Update to 6.7.
2017-01-10 17:36:57 +01:00
Mark H Weaver 3720371580
gnu: linux-libre@4.4: Update hash for fixed upstream tarball.
The initial upload of linux-libre-4.4.41-gnu.tar.xz was corrupted.

* gnu/packages/linux.scm (linux-libre-4.4)[source]: Update hash.
2017-01-10 11:04:13 -05:00
Ludovic Courtès 022c977258
gnu: libgit2, python-pygit2: Update to 0.25.1 [security fixes].
See <http://www.openwall.com/lists/oss-security/2017/01/10/5>.

* gnu/packages/version-control.scm (libgit2): Update to 0.25.1.
* gnu/packages/python.scm (python-pygit2): Update to 0.25.0.
2017-01-10 15:49:49 +01:00
David Craven b1a505baf6
system: Add btrfs file system support.
* gnu/build/file-systems.scm (%btrfs-endianness, btrfs-superblock?,
  read-btrfs-superblock, btrfs-superblock-uuid,
  btrfs-superblock-volume-name, check-btrfs-file-system): New variables.
  (%paritition-label-readers, %partition-uuid-readers): Add btrfs
  readers.
* gnu/system/linux-initrd.scm (linux-modules): Add btrfs modules when a
  btrfs file-system is used.
* gnu/tests/install.scm (%btrfs-root-os %btrfs-root-os-source,
  %btrfs-root-installation-script, %test-btrfs-root-os): New system
  test.
* doc/guix.texi: Adjust accordingly.

Fixes <http://bugs.gnu.org/19280>.
2017-01-10 12:00:35 +01:00
David Craven f3e44f5cd0
gnu: Add btrfs-progs/static.
* gnu/packages/linux.scm (btrfs-progs/static): New variable.
2017-01-10 12:00:34 +01:00
David Craven ab4e939c50
file-systems: Refactor file-system predicates.
* gnu/build/file-systems.scm (partition-field-reader,
  read-partition-field, %partition-label-readers,
  %partition-uuid-readers, read-partition-label, read-partition-uuid):
  New variables.
  (partition-predicate, partition-label-predicate,
  partition-uuid-predicate, luks-partition-uuid-predicate): Use
  partition field readers.
  (find-partition): New variable.
  (find-partition-by-label, find-partition-by-uuid,
  find-partition-by-luks-uuid): Use find-partition-by.
2017-01-10 12:00:05 +01:00
David Craven 26905ec8a6
file-systems: Refactor check-file-system.
* gnu/build/file-systems.scm (check-file-system): Use file-system type
  specific checker.
  (check-ext2-file-system): New variable.
2017-01-10 11:58:11 +01:00
David Craven 313880c73a
gnu: e2fsck/static: Only copy e2fsck.
* gnu/packages/linux.scm (e2fsck/static)[arguments]: Only copy e2fsck.
  [synopsis, description]: Adjust accordingly.
2017-01-10 11:58:11 +01:00
Ricardo Wurmus f03168327f
gnu: Add pcc.
* gnu/packages/c.scm (pcc): New variable.
2017-01-10 11:30:42 +01:00
Ben Woodcroft cba53c60d5
gnu: ruby-sqlite3: Update to 1.3.13.
* gnu/packages/ruby.scm (ruby-sqlite3): Update to 1.3.13.
2017-01-10 18:40:58 +10:00
Mark H Weaver d33f889dac
gnu: linux-libre: Update to 4.9.2.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.2.
2017-01-09 22:42:32 -05:00
Mark H Weaver 75fd35b670
gnu: linux-libre@4.4: Update to 4.4.41.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.41.
2017-01-09 22:41:21 -05:00
Alex Kost 28fd01bceb
gnu: emacs-guix: Update to 0.2.2.
* gnu/packages/emacs.scm (emacs-guix): Update to 0.2.2.
2017-01-10 00:23:07 +03:00
Alex Kost f6b1dd233d
gnu: emacs-bui: Update to 1.1.0.
* gnu/packages/emacs.scm (emacs-bui): Update to 1.1.0.
2017-01-10 00:23:07 +03:00
ng0 5ed962263c
gnu: whois: Update to 5.2.14.
* gnu/packages/networking.scm (whois): Update to 5.2.14.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-09 16:04:55 -05:00
Leo Famulari 5ba5b4b240
gnu: imagemagick: Update to 6.9.7-3.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-3.
2017-01-09 14:18:51 -05:00
John Darrington 4f903085ac
Revert "gnu: Update imagemagick to version 7.0.4-3."
This reverts commit dea228cf12.
2017-01-09 20:06:26 +01:00
Mathieu Lirzin 04927b6f26
gnu: cuirass: Update to 0.0.1 revision 3.
* gnu/packages/ci.scm (cuirass): Update to 0.0.1 revision 3.
[arguments]: Move 'bootstrap' phase before 'configure'.  Disable
"tests/repo.scm" test.
2017-01-09 18:57:15 +01:00
John Darrington cac19f0df9
gnu: Update aqbanking to version 5.6.12.
* gnu/packages/gnucash.scm (aqbanking): Update to version 5.6.12.
2017-01-09 18:55:27 +01:00
John Darrington dea228cf12
gnu: Update imagemagick to version 7.0.4-3.
* gnu/packages/imagemagick.scm: Update to version 7.0.4-3
2017-01-09 18:55:22 +01:00
José Miguel Sánchez García 84aafbbb66
gnu: Add nim.
* gnu/packages/nim.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add nim.scm.
2017-01-09 18:01:52 +01:00
David Craven 5d18d776d2
gnu: rustc: Retain binutils.
* gnu/packages/rust.scm (rustc)[arguments]: Retain binutils. Add
  wrap-rustc phase.

Problem reported by Ben Woodcroft <donttrustben@gmail.com>.
2017-01-09 18:01:52 +01:00
John Darrington 834458f6ff
gnu: Simplify the downloads from http://www.aquamaniac.de
* gnu/packages/gnucash.scm (aqbanking, gwenhyfar): Remove dummy parameter
from source url.
2017-01-09 17:50:49 +01:00
Christopher Allan Webber ab4a1731d8
gnu: guile-8sync: Add #t at end of setenv phase.
* gnu/packages/guile.scm: Add #t at end of setenv phase.
2017-01-09 09:51:10 -06:00
Christopher Allan Webber c5793e7eb7
gnu: Add guile-8sync.
* gnu/packages/guile.scm (guile-8sync): New variable.
2017-01-09 09:41:30 -06:00
Thomas Danckaert 7bbf2e39f7
gnu: hdf4: Update to 4.2.12.
* gnu/packages/maths.scm (hdf4): Update to 4.2.12.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-09 15:55:57 +01:00
Maxim Cournoyer 392c26b0d1
gnu: python-pip: Update to 9.0.1
* gnu/packages/python.scm (python-pip): Update to 9.0.1.
[native-inputs]: Remove.
[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-09 15:55:57 +01:00
Alex Sassmannshausen 814b18e587
gnu: Add Guile-ICS.
* gnu/packages/guile.scm (guile-ics): New variable.
2017-01-09 11:34:09 +01:00
Danny Milosavljevic ee719fba2d
gnu: Add corrode.
* gnu/packages/haskell.scm (corrode): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-01-09 10:44:52 +01:00
ng0 f048f12ba1
gnu: Add dotherside.
* gnu/packages/qt.scm (dotherside): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-09 10:33:07 +01:00
ng0 bb0756c7c7
gnu: Add font-google-roboto.
* gnu/packages/fonts.scm (font-google-roboto): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-09 10:33:07 +01:00
Mark H Weaver 96404be814
gnu: gdk-pixbuf: Update replacement to 2.36.3.
* gnu/packages/gtk.scm (gdk-pixbuf/fixed): Update to 2.36.3.
2017-01-08 23:42:03 -05:00
Mark H Weaver 86c41ec3e4
gnu: icecat: Add fixes from upstream mozilla-esr45.
* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add selected fixes
from the upstream mozilla-esr45 repository.
2017-01-08 20:36:29 -05:00
Mark H Weaver 989862005a
gnu: icecat: Rename patches that have been assigned CVEs.
* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Rename patches that
have since been assigned CVEs.
2017-01-08 20:36:27 -05:00
Mark H Weaver b9acdad717
gnu: gdk-pixbuf: Replace with 2.36.2.
* gnu/packages/gtk.scm (gdk-pixbuf)[replacement]: New field.
(gdk-pixbuf/fixed): New variable.
(package/inherit): New macro.
(gdk-pixbuf+svg): Use 'package/inherit'.
2017-01-08 20:36:20 -05:00
Clément Lassieur 78cef99b98
gnu: Add Prosody service.
* gnu/services/messaging.scm: New file.
* gnu/services/configuration.scm: New exported procedures.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/services/messaging.scm.
* doc/guix.texi (Messaging Services): New section.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-08 23:39:36 +01:00
Clément Lassieur 84bf2a2e74
gnu: prosody: Make config and data files visible to 'prosodyctl'.
* gnu/packages/messaging.scm (prosody)[arguments]: Add a 'fix-makefile' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-08 23:38:49 +01:00
Clément Lassieur 5b4946180e
gnu: prosody: Add OpenSSL and Coreutils to the PATH of programs.
* gnu/packages/messaging.scm (prosody)[arguments]: In 'wrap-programs'
phase, add 'openssl' and 'coreutils' to 'PATH'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-08 23:37:06 +01:00
Ludovic Courtès 9e3e972d1e
gnu: Add fprintd.
* gnu/packages/freedesktop.scm (fprintd): New variable.
2017-01-08 23:26:47 +01:00
Ludovic Courtès dfb01baec4
gnu: Add libfprint.
* gnu/packages/freedesktop.scm (libfprint): New variable.
2017-01-08 23:26:47 +01:00
David Craven ec460a2a37
gnu: font-liberation: Use @item in @enumerate.
* gnu/packages/fonts.scm (font-liberation)[description]: Use @item.

Followup to 0102fba27c.
2017-01-08 23:00:55 +01:00
Mark H Weaver 3a3e309975
gnu: ruby-yard: Fix typo in source URI.
This is a followup to commit 6499893ef8.

* gnu/packages/ruby.scm (ruby-yard)[source][uri]: Fix typo.
2017-01-08 07:25:45 -05:00
Ben Woodcroft 6499893ef8
gnu: ruby-yard: Update to 0.9.6.
* gnu/packages/ruby.scm (ruby-yard): Update to 0.9.6.
[source]: Use 'GitHub' source.
[arguments]: Run tests without 'Rakefile'.
[native-inputs]: Replace 'ruby-rspec-2' with ruby-rspec'.
* gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-01-08 11:10:28 +10:00
Mark H Weaver 57fe28a082
gnu: linux-libre: Update to 4.9.1.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.1.
* gnu/packages/linux-libre-4.8-x86_64.conf,
gnu/packages/linux-libre-4.8-i686.conf: Delete files.
* gnu/packages/linux-libre-4.9-x86_64.conf,
gnu/packages/linux-libre-4.9-i686.conf: New files.
* Makefile.am (KCONFIGS): Update accordingly.
2017-01-07 19:42:36 -05:00
Mark H Weaver 0860081413
gnu: linux-libre@4.4: Update to 4.4.40.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.40.
2017-01-07 19:42:23 -05:00
Leo Famulari 1c9cea74b4
gnu: python-pygpgme: Fix build failure.
* gnu/packages/patches/python-pygpgme-fix-pinentry-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (python-pygpgme, python2-pygpgme)[source]: Use it.
2017-01-07 19:00:58 -05:00
Clément Lassieur 261f56914c
gnu: econnman: Add missing input.
* gnu/packages/connman.scm (econnman)[inputs]: Add python2-dbus.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-07 23:02:48 +01:00
Alex Griffin 2b84170782
gnu: gnome-mpv: Update to 0.11.
* gnu/packages/video.scm (gnome-mpv): Update to 0.11.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-07 22:55:40 +01:00
Thomas Danckaert e10872cc83
gnu: gpgme: Patch CMake files.
* gnu/packages/gnupg.scm (gpgme)[arguments]: Substitute '@libsuffix@' by
  '.so'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-07 22:55:40 +01:00
Ludovic Courtès b2859a4fef
gnu: zlib: Fix alternate download URL.
* gnu/packages/compression.scm (zlib)[source](uri): Update SourceForge URL.
2017-01-07 22:55:40 +01:00
Leo Famulari 9385f0e9cb
Revert "gnu: nspr: Update to 4.13.1."
There were many reports that NSS failed to build with this change.

This reverts commit 707c65aad7.
2017-01-07 15:38:30 -05:00
Ludovic Courtès d7d5050c51
gnu: ao-cad: Point 'LD_LIBRARY_PATH' to Mesa.
* gnu/packages/engineering.scm (ao)[arguments]: In
'install-guile-bindings', wrap 'ao-guile' to set 'LD_LIBRARY_PATH'.
[inputs]: Add MESA.
2017-01-07 00:38:03 +01:00
Tobias Geerinckx-Rice a2bd16ff99
gnu: vim: Update to 8.0.0147.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0147.
2017-01-07 00:26:23 +01:00
Tobias Geerinckx-Rice 0102fba27c
gnu: font-liberation: Use @enumerate in description.
* gnu/packages/fonts.scm (font-liberation)[description]: Use @enumerate.
2017-01-07 00:26:22 +01:00
Tobias Geerinckx-Rice b4774d87e4
gnu: fonts: Improve synopses & descriptions.
* gnu/packages/fonts.scm (font-google-noto, font-hack)[synopsis,
description]: Fix typos, grammar, and general style only.
(font-dejavu, font-terminus, font-wqy-zenhei)[description]: Likewise.
2017-01-07 00:26:22 +01:00
Tobias Geerinckx-Rice 8837860c66
gnu: fonts: Use install-file where appropriate.
* gnu/packages/fonts.scm (font-ubuntu, font-dejavu, font-bitstream-vera,
font-gnu-freefont-ttf, font-liberation, font-wqy-zenhei, font-anonymous-pro,
font-google-noto, font-un, font-hack): Substitute the simpler INSTALL-FILE
for every COPY-FILE invoked with redundant arguments.
2017-01-07 00:26:12 +01:00
Tobias Geerinckx-Rice 9657aeb187
gnu: python-tblib: Properly @end enumerate.
* gnu/packages/python.scm (python-tblib)[description]: Don't use
‘@end itemize’ to end an ‘@enumerate’ block.
2017-01-07 00:23:53 +01:00
Leo Famulari aa21c764d6
gnu: python-pycrypto: Fix CVE-2013-7459.
* gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto)[source]: Use the
patch. Use pypi-uri.
2017-01-06 13:50:18 -05:00
Leo Famulari 707c65aad7
gnu: nspr: Update to 4.13.1.
* gnu/packages/gnuzilla.scm (nspr): Update to 4.13.1.
2017-01-06 13:09:05 -05:00
Ricardo Wurmus 3a3bf2f819
gnu: Add r-copywriter.
* gnu/packages/bioinformatics.scm (r-copywriter): New variable.
2017-01-06 16:31:19 +01:00
Ricardo Wurmus d407bdb931
gnu: Add r-copyhelper.
* gnu/packages/bioinformatics.scm (r-copyhelper): New variable.
2017-01-06 16:31:14 +01:00
Ricardo Wurmus 6193563a36
gnu: Add r-chipseq.
* gnu/packages/bioinformatics.scm (r-chipseq): New variable.
2017-01-06 16:31:02 +01:00
David Craven 974e02da76
file-systems: Refactor file system detection logic.
* gnu/build/file-systems.scm (read-superblock,
  null-terminated-latin1->string): New variables.
  (sub-bytevector): Move to general section.
  (ext2-superblock?, read-ext2-superblock): New variables.
  (ext2-superblock-uuid, ext2-superblock-volume-name): Use
  sub-bytevector and null-terminated-latin1->string.
  (%ext2-sblock-magic, %ext2-sblock-creator-os, %ext2-sblock-uuid,
  %ext2-sblock-volume-name): Inline constants.
  (luks-superblock?, read-luks-header): New variables.
  (%luks-header-size, %luks-magic): Inline.
  (partition-label-predicate, partition-uuid-predicate,
  luks-partition-uuid-predicate): Use new functions.
2017-01-06 15:06:42 +01:00
Christopher Baines fab2784dbb
gnu: gnome-tweak-tool: Add missing inputs.
* gnu/packages/gnome.scm (gnome-tweak-tool)[inputs]: Add gnome-desktop
and libsoup.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-06 10:23:27 +01:00
Christopher Baines adb41527ad
gnu: gnome-tweak-tool: Make propagated-inputs just inputs.
* gnu/packages/gnome.scm (gnome-tweak-tool)[propagated-inputs]: Merge
with...
[inputs]: ... this.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-06 10:23:27 +01:00
Christopher Baines 9af6bce1e1
gnu: gnome-tweak-tool: Wrap program to set 'GI_TYPELIB_PATH'.
* gnu/packages/gnome.scm (gnome-tweak-tool)[arguments]: Add
'wrap-program' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-06 10:23:27 +01:00
Christopher Baines 7ef335b0e8
gnu: gnome-tweak-tool: Use glib-or-gtk-build-system.
This allows gobject introspection namespaces to be found.

* gnu/packages/gnome.scm (gnome-tweak-tool)[build-system]: Set to
GLIB-OR-GTK-BUILD-SYSTEM.
[arguments]: Use %GLIB-OR-GTK-BUILD-SYSTEM-MODULES in #:imported-modules.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-06 10:23:27 +01:00
Ben J Woodcroft dbf9d37114
gnu: bioruby: Update to 1.5.1.
* gnu/packages/bioinformatics.scm (bioruby): Update to 1.5.1.
2017-01-06 19:06:07 +10:00
Ben J Woodcroft 0c37e2a3d2
gnu: cd-hit: Update to 4.6.6.
* gnu/packages/bioinformatics.scm (cd-hit): Update to 4.6.6.
2017-01-06 19:06:03 +10:00
Leo Famulari e50d5b8c9d
gnu: khal: Disable failing tests.
* gnu/packages/patches/khal-disable-failing-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/calendar.scm (khal): Use it.
2017-01-06 03:19:40 -05:00
Leo Famulari e0c32fc817
gnu: vdirsyncer: Update to 0.14.1.
* gnu/packages/dav.scm (vdirsyncer): Update to 0.14.1.
2017-01-06 03:19:40 -05:00
Leo Famulari 491b78a8e8
gnu: python-icalendar: Update to 3.11.1.
* gnu/packages/python.scm (python-icalendar): Update to 3.11.1.
2017-01-06 03:19:36 -05:00
Ludovic Courtès fbec5abeef
gnu: gv: Do not propagate Ghostscript.
* gnu/packages/gv.scm (gv)[propagated-inputs]: Remove.
[arguments]: New field.
[inputs]: Add GHOSTCRIPT/X.
2017-01-05 23:45:38 +01:00
Alex Kost ec14d2157d
gnu: emacs-smartparens: Update to 1.9.0.
* gnu/packages/emacs.scm (emacs-smartparens): Update to 1.9.0.
2017-01-06 00:31:03 +03:00