Commit Graph

659 Commits

Author SHA1 Message Date
Ludovic Courtès 64de896a71
Merge branch 'master' into core-updates 2019-07-17 15:51:10 +02:00
Paul Garlick 37dc29200c
gnu: Add opencascade-occt.
* gnu/packages/maths.scm (opencascade-occt): New variable.
2019-07-16 22:19:26 +01:00
Marius Bakke 97149c5767
gnu: Adjust uses of C{,PLUS}_INCLUDE_PATH for GCC 7.
These variables are no longer set in the build environment by default.  GCC
still respects these search paths and treats them as "system headers" so we
can continue to use them, just not expect them to be available.

* gnu/packages/mpi.scm (openmpi)[arguments]: Do not attempt to read from
C_INCLUDE_PATH, nor CPLUS_INCLUDE_PATH.
* gnu/packages/games.scm (kiki)[arguments]: Likewise.
* gnu/packages/networking.scm (hcxtools)[arguments]: Likewise.
* gnu/packages/synergy.scm (synergy)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (gemma, sailfish)[arguments]: Likewise.
* gnu/packages/maths.scm (dune-alugrid)[arguments]: Likewise.
2019-07-14 18:13:34 +02:00
Marius Bakke 4fb9165515
Merge branch 'staging' into core-updates 2019-07-02 20:18:16 +02:00
Efraim Flashner 697df13f61
gnu: octave-cli: Sort inputs alphabetically.
* gnu/packages/maths.scm (octave-cli)[inputs]: Sort inputs alphabetically.
2019-07-02 15:04:56 +03:00
Efraim Flashner 5b786db86c
gnu: atlas: All phases return #t.
* gnu/packages/maths.scm (atlas)[arguments]: Ensure all custom phases
return #t.
2019-06-28 10:39:11 +03:00
Ludovic Courtès 5cc1075a76
Merge branch 'master' into core-updates 2019-06-27 23:33:48 +02:00
Tobias Geerinckx-Rice cb1d8aeeb3
gnu: gnuplot: Update to 5.2.7.
* gnu/packages/maths.scm (gnuplot): Update to 5.2.7.
2019-06-21 23:20:36 +02:00
Marius Bakke 6cb1ef9ea2
Merge branch 'staging' into core-updates 2019-06-20 23:38:56 +02:00
Andreas Enge 264334716f
gnu: Add ppl.
* gnu/packages/maths.scm (ppl): New variable.
2019-06-20 16:46:37 +02:00
Nicolas Goaziou ab398380eb
gnu: Move ratpoints into a different module.
* gnu/packages/maths.scm (ratpoints): Move...
* gnu/packages/algebra.scm: ...here.
2019-06-20 09:20:29 +02:00
Nicolas Goaziou 0c842e3a59
gnu: Add ratpoints.
* gnu/packages/maths.scm (ratpoints): New variable.
* gnu/packages/patches/ratpoints-sturm_and_rp_private.patch: New file.
* gnu/local.mk (dist_patch_DATA): Reference patch.
2019-06-19 21:43:12 +02:00
Andreas Enge f455d99dfa
gnu: edge-addition-planarity-suite: Move to the (gnu packages graph) module.
* gnu/packages/maths.scm (edge-addition-planarity-suite): Move from here...
* gnu/packages/maths.scm (edge-addition-planarity-suite): ...to here.
2019-06-17 19:47:15 +02:00
Andreas Enge 9f6065237d
gnu: Add edge-addition-planarity-suite.
* gnu/packages/maths.scm (edge-addition-planarity-suite): New variable.
2019-06-17 17:02:01 +02:00
Ludovic Courtès 494a8cd03a
gnu: units: Update to 2.19.
* gnu/packages/maths.scm (units): Update to 2.19.
2019-06-15 18:29:58 +02:00
Ludovic Courtès d9bbfe042e
Merge branch 'master' into core-updates 2019-06-13 13:24:35 +02:00
Kei Kebreau eeccd2e575
gnu: wxmaxima: Update to 19.05.7.
* gnu/packages/maths.scm (wxmaxima): Update to 19.05.7.
2019-06-04 10:44:14 -04:00
Kei Kebreau ccc963d528
gnu: maxima: Update to 5.43.0.
* gnu/packages/maths.scm (maxima): Update to 5.43.0.
[arguments]: Adjust "patch-paths" and "post-install" phases.
2019-06-04 09:30:38 -04:00
Eric Bavier 4d44bcad56
gnu: dealii-openmpi: Add hdf5-parallel-openmpi input.
* gnu/packages/maths.scm (dealii-openmpi)[inputs]: Add hdf5-parallel-openmpi.
2019-05-31 19:41:41 -05:00
Eric Bavier a13e0f3db4
gnu: slepc: Update to 3.11.1.
* gnu/packages/maths.scm (slepc): Update to 3.11.1.
[native-inputs]: Add petsc:examples.
[arguments]: Add PETSCCONFIGDIR to #:make-flags.
2019-05-31 19:41:41 -05:00
Eric Bavier 4f7a4a06c2
gnu: petsc: Update to 3.11.2.
* gnu/packages/maths.scm (petsc): Update to 3.11.2.
2019-05-31 19:41:41 -05:00
Eric Bavier e586c6faf3
gnu: petsc-complex-mpi: Setup MPI for tests.
* gnu/packages/maths.scm (petsc-complex-mpi)[arguments]: Add 'mpi-setup
phase.
2019-05-31 19:41:41 -05:00
Marius Bakke 57df83e07d
Merge branch 'staging' into core-updates 2019-05-25 00:25:15 +02:00
Vagrant Cascadian 57e69c1d2e
gnu: mumps: Fix typo "Gaussian".
* gnu/packages/maths (mumps)[description]: Fix typo.
2019-05-22 18:29:33 -07:00
Vagrant Cascadian 784c3da11e
gnu: hdf5-parallel-openmpi: Fix typo "explicitly".
* gnu/packages/maths (hdf5-parallel-openmpi): Fix typo.
2019-05-22 18:21:16 -07:00
Tobias Geerinckx-Rice a36efdbc60
gnu: mlucas: Update source hash.
The tarball was modified in-place with too many small changes to list
here, all of them apparently intended as minor bug fixes.

* gnu/packages/maths.scm (mlucas)[source]: Update sha256.
2019-05-17 03:27:41 +02:00
Nicolas Goaziou 6f8c41958f
gnu: Add nauty.
* gnu/packages/maths.scm (nauty): New variable.
2019-05-16 23:19:08 +02:00
Ludovic Courtès 3ea420f337
gnu: hdf5: Add dependency on Perl.
* gnu/packages/maths.scm (hdf5)[native-inputs]: Add PERL.
2019-05-14 12:11:04 +02:00
Ludovic Courtès 549d15712f
gnu: hdf5: Build a thread-safe library.
* gnu/packages/maths.scm (hdf5)[arguments]: Pass "--enable-threadsafe
--with-pthread --enable-unsupported".
2019-05-14 12:11:04 +02:00
Ricardo Wurmus ae9ed1390f
gnu: r-quadprog: Update to 1.5-7.
* gnu/packages/maths.scm (r-quadprog): Update to 1.5-7.
2019-05-11 12:05:34 +02:00
Marius Bakke e77412362f
gnu: OpenBLAS: Update to 0.3.6.
* gnu/packages/maths.scm (openblas): Update to 0.3.6.
2019-05-04 16:25:53 +02:00
Ricardo Wurmus 6b1c7ac8ed
gnu: hypre: Unconditionally return #T from build phases.
* gnu/packages/maths.scm (hypre)[arguments]: Use INVOKE and unconditionally
return #T from build phases.
2019-04-28 16:05:57 +02:00
Ricardo Wurmus 9cd82b1c9d
gnu: jacal: Unconditionally return #T from configure phase.
* gnu/packages/maths.scm (jacal)[arguments]: Use INVOKE in configure phase.
2019-04-28 16:05:57 +02:00
Ricardo Wurmus 32d5360f43
gnu: z3: Unconditionally return #T from build phases.
* gnu/packages/maths.scm (z3)[arguments]: Use INVOKE in build phases.
2019-04-28 16:05:56 +02:00
Ricardo Wurmus cb6f44d4e4
gnu: atlas: Always return #T from build phases.
* gnu/packages/maths.scm (atlas)[arguments]: Always return #T from build
phases; use INVOKE.
2019-04-28 16:05:56 +02:00
Ricardo Wurmus 1ec1782106
gnu: make-blis: Always return #T from configure phase.
* gnu/packages/maths.scm (make-blis)[arguments]: Use INVOKE.
2019-04-28 16:05:56 +02:00
Ludovic Courtès 7d62fa206b
Merge branch 'staging' 2019-04-28 14:45:35 +02:00
Ricardo Wurmus ea9d634c7e
gnu: r-quadprog: Update to 1.5-6.
* gnu/packages/maths.scm (r-quadprog): Update to 1.5-6.
2019-04-27 12:03:13 +02:00
Marius Bakke 37da4fbe15
Merge branch 'master' into staging 2019-04-23 19:43:59 +02:00
Mark H Weaver df129041dd
gnu: maxima: Return #t from custom 'check' phase.
* gnu/packages/maths.scm (maxima)[arguments]: Use invoke in the custom
check phase.
2019-04-22 14:58:24 -04:00
Marius Bakke f5961dd585
Merge branch 'master' into staging 2019-04-17 00:08:34 +02:00
Tobias Geerinckx-Rice be0997278b
gnu: hypre: Update to 2.15.1.
* gnu/packages/maths.scm (hypre): Update to 2.15.1.
2019-04-15 05:11:31 +02:00
Tobias Geerinckx-Rice fabcbf3261
gnu: hypre: Don't use unstable tarball.
* gnu/packages/maths.scm (hypre)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-04-15 05:11:31 +02:00
Tobias Geerinckx-Rice 90cea67111
gnu: openspecfun: Don't use unstable tarball.
* gnu/packages/maths.scm (openspecfun)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-04-15 05:11:31 +02:00
Tobias Geerinckx-Rice 67f1db3864
gnu: muparser: Don't use unstable tarball.
* gnu/packages/maths.scm (muparser)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-04-15 05:11:31 +02:00
Ricardo Wurmus 9f2a87d1bf
gnu: r-pracma: Update to 2.2.5.
* gnu/packages/maths.scm (r-pracma): Update to 2.2.5.
2019-04-11 23:37:24 +02:00
Tobias Geerinckx-Rice ca72dd2cb5
gnu: openlibm: Don't use unstable tarball.
* gnu/packages/maths.scm (openlibm)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-04-11 05:42:38 +02:00
Tobias Geerinckx-Rice 830971bf3a
gnu: opencascade-oce: Don't use unstable tarball.
* gnu/packages/maths.scm (opencascade-oce)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-04-11 05:42:38 +02:00
Tobias Geerinckx-Rice 5db874d1df
gnu: gctp: Don't use unstable tarball.
* gnu/packages/maths.scm (gctp)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-04-11 05:42:37 +02:00
Ludovic Courtès db7441e470
Merge branch 'master' into staging 2019-04-08 23:08:56 +02:00