5865606459
gnu: Add r-rhisat2.
...
* gnu/packages/bioconductor.scm (r-rhisat2): New variable.
2019-05-10 13:31:03 +02:00
1444153913
gnu: Add r-sgseq.
...
* gnu/packages/bioconductor.scm (r-sgseq): New variable.
2019-05-10 13:31:03 +02:00
30f1029f4c
gnu: Add r-xgboost.
...
* gnu/packages/cran.scm (r-xgboost): New variable.
2019-05-10 13:31:03 +02:00
29591ca611
gnu: Add r-citr.
...
* gnu/packages/cran.scm (r-citr): New variable.
2019-05-10 13:31:02 +02:00
afc4370d4c
gnu: Add r-refmanager.
...
* gnu/packages/cran.scm (r-refmanager): New variable.
2019-05-10 13:31:02 +02:00
85625cae66
gnu: Add r-ggfortify.
...
* gnu/packages/cran.scm (r-ggfortify): New variable.
2019-05-10 13:31:02 +02:00
c9487dfadc
gnu: Add r-plot3d.
...
* gnu/packages/cran.scm (r-plot3d): New variable.
2019-05-10 13:31:02 +02:00
70debac5f1
gnu: Add r-enrichr.
...
* gnu/packages/cran.scm (r-enrichr): New variable.
2019-05-10 13:31:02 +02:00
5bea832f72
gnu: Add r-dalex.
...
* gnu/packages/cran.scm (r-dalex): New variable.
2019-05-10 13:31:02 +02:00
4d06ef4b71
gnu: Add r-rbowtie.
...
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
2019-05-10 13:31:02 +02:00
8c42f8f6e8
gnu: Add r-iclusterplus.
...
* gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
2019-05-10 13:31:01 +02:00
b40a36baff
gnu: linux-libre: Update to 5.1.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.
(%linux-libre-hash): Update hash.
(%linux-libre-5.0-patches): Rename to ...
(%linux-libre-5.1-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-veyron)
(linux-libre-arm-omap2plus): Use %linux-libre-5.1-patches.
(vhba-module): Move definition below the kernel packages.
* gnu/packages/aux-files/linux-libre/5.0-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.1-arm.conf,
gnu/packages/aux-files/linux-libre/5.1-arm64.conf,
gnu/packages/aux-files/linux-libre/5.1-i686.conf,
gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2019-05-10 00:00:49 -04:00
3d8033af42
gnu: rust: Update to 1.34.1.
...
* gnu/packages/rust.scm (rust): Update to 1.34.1.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:09 +02:00
4ed20d3cfe
gnu: rust: Make source derivations smaller.
...
* gnu/packages/rust.scm (rust-source-pre-1.32): Delete procedure.
(rust-bootstrapped-package-pre-1.32): Delete procedure.
(rust-bootstrapped-package): Remove optional keys, and return an origin.
(rust-uri): New variable.
(mrustc): Change native-input "rust" to use source of rust-1.19.
(rust-1.19)[source]: Define package source.
(rust-1.20): Use rust-bootstrapped-package.
(rust-1.21): Likewise.
(rust-1.22): Likewise.
(rust-1.23): Likewise.
(rust-1.24): Likewise.
(rust-1.25): Likewise.
(rust-1.26): Likewise.
(rust-1.27): Likewise.
(rust-1.28): Likewise.
(rust-1.29): Likewise.
(rust-1.30): Likewise.
(rust-1.31): Likewise.
(rust-1.32): Likewise.
(rust-1.33): Likewise.
(rust-1.34): Likewise.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:09 +02:00
bea01c0d2b
gnu: rust: Delete install logs and manifests.
...
* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[delete-install-logs]:
New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:08 +02:00
e88735b45f
build/cargo-utils: Remove "src-name" parameter.
...
* gnu/packages/gnuzilla.scm (icecat)[arguments]<#:phases>
[patch-cargo-checksums]: Delete "null-file" variable.
* gnu/packages/rust.scm (%cargo-reference-project-file): Delete variable.
* gnu/packages/rust.scm (rust-1.19): Remove reference to
"%cargo-reference-project-file".
* guix/build/cargo-utils.scm (generate-checksums): Remove "src-name"
parameter.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:08 +02:00
d78010b81e
gnu: gcc-4.7: Hide package.
...
* gnu/packages/gcc.scm (gcc-4.7): Wrap in "hidden-package" expression.
2019-05-09 23:18:39 +02:00
935568d5ce
gnu: emacs-dash: Update to 2.16.0.
...
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.16.0.
2019-05-09 22:51:33 +02:00
b97b4624d0
gnu: Add guile-file-names.
...
* gnu/packages/guile-xyz.scm (guile-file-names): New variable.
2019-05-09 22:41:14 +02:00
ae623b3f9d
gnu: seabios: Update to 1.12.1.
...
This is a stable release despite the missing tarball.
<https://mail.coreboot.org/hyperkitty/list/seabios@seabios.org/thread/ONGRJVF3A45SAXOKBED52V2UD3YUWTRT/ >
* gnu/packages/firmware.scm (seabios): Update to 1.12.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
2019-05-09 21:16:54 +02:00
05de4c346d
gnu: man-pages: Update to 5.01.
...
* gnu/packages/man.scm (man-pages): Update to 5.01.
2019-05-09 21:16:53 +02:00
34dce89a0c
gnu: emacs-sml-mode: Update to 6.9.
...
* gnu/packages/emacs-xyz.scm (emacs-sml-mode): Update to 6.9.
2019-05-09 21:16:53 +02:00
b03a4ed465
gnu: cdemu-client: Update to 3.2.1.
...
* gnu/packages/cdrom.scm (cdemu-client): Update to 3.2.1.
2019-05-09 21:13:29 +02:00
97dbf75a56
gnu: cdemu-daemon: Update to 3.2.2.
...
* gnu/packages/cdrom.scm (cdemu-daemon): Update to 3.2.2.
2019-05-09 21:13:28 +02:00
d201571754
gnu: libmirage: Update to 3.2.2.
...
* gnu/packages/cdrom.scm (libmirage): Update to 3.2.2.
2019-05-09 21:13:28 +02:00
819b3b8201
gnu: vhba-module: Update to 20190410.
...
* gnu/packages/linux.scm (vhba-module): Update to 20190410.
2019-05-09 21:13:28 +02:00
38878020b0
gnu: cloc: Update to 1.82.
...
* gnu/packages/code.scm (cloc): Update to 1.82.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
2019-05-09 21:13:28 +02:00
6c2180f5d0
services: dhcp-client: Ignore interfaces that are not ARP capable.
...
* gnu/services/networking.scm (dhcp-client-service-type): Filter interfaces
that do not support the ARP protocol.
2019-05-09 20:00:22 +02:00
18160c3408
gnu: Use mirror://kernel.org in source URIs.
...
* gnu/packages/linux.scm (bridge-utils, cpufrequtils, sbc)[source](uri): Use
"mirror://kernel.org" instead of www.kernel.org directly.
2019-05-09 14:06:07 +02:00
aeb1ed1abc
gnu: wpa_supplicant: Update to 2.8 [security fixes].
...
This release fixes CVE-2019-9494, CVE-2019-9495, CVE-2019-9496, CVE-2019-9497,
CVE-2019-9498, CVE-2019-9499, and CVE-2019-11555.
* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.8.
[source](snippet): New field. Disable D-Bus.
[arguments]: Change CONFIG_TLS to use OpenSSL rather than GnuTLS. This is
required by many of the new default build-time settings.
[inputs]: Remove GNUTLS and LIBGCRYPT. Add OPENSSL.
(wpa-supplicant)[arguments]: Remove obsolete CONFIG_CTRL_IFACE_DBUS=y.
2019-05-09 13:43:03 +02:00
3fde051bfd
gnu: libtorrent-rasterbar: Update to 1.1.13.
...
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.13.
2019-05-09 13:43:03 +02:00
3a32be71eb
gnu: leveldb: Update to 1.22.
...
* gnu/packages/databases.scm (leveldb): Update to 1.22.
2019-05-09 13:43:03 +02:00
4506018e28
gnu: Mercurial: Update to 5.0
...
* gnu/packages/version-control.scm (mercurial): Update to 5.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-09 12:11:37 +02:00
e6b1a2248f
services: Log-in services now require "pam_loginuid".
...
Fixes <https://bugs.gnu.org/35553 >.
Reported by Bruno Haible <bruno@clisp.org>.
* gnu/services/base.scm (login-pam-service): Pass #:login-uid? #t to
'unix-pam-service'.
* gnu/services/ssh.scm (lsh-pam-services, openssh-pam-services):
Likewise.
* gnu/services/xorg.scm (slim-pam-service): Likewise.
(gdm-pam-service): Likewise for "gdm-autologin" and "gdm-password".
* gnu/tests/base.scm (run-basic-test)["getlogin on tty1"]: New test.
* gnu/tests/ssh.scm (run-ssh-test): Add #:test-getlogin? parameter.
["getlogin"]: New test.
(%test-dropbear): Pass #:test-getlogin? #f.
2019-05-09 12:11:36 +02:00
af55ca481d
system: pam: Add #:login-uid? parameter to 'unix-pam-service'.
...
* gnu/system/pam.scm (unix-pam-service): Add #:login-uid? parameter. In
then 'session' field, add "pam_loginuid.so" as required when LOGIN-UID?
is true.
2019-05-09 12:11:36 +02:00
56038bac60
gnu: Add hostapd.
...
* gnu/packages/admin.scm (hostapd): New variable.
2019-05-09 12:11:36 +02:00
6ad799d7c5
services: slim: Provide the 'xorg-server' Shepherd service.
...
This is a followup to 61569171d0
2019-05-09 12:11:36 +02:00
cae0725b80
bootloader: grub: Remove unneeded 'terminal_output'.
...
Fixes <https://bugs.gnu.org/35585 >.
Reported by Florian Pelz <pelzflorian@pelzflorian.de>.
This statement was added in 8d058e7b1b
2019-05-09 12:11:36 +02:00
fb98e430d4
installer: Add missing 'G_' call.
...
* gnu/installer/newt/user.scm (run-user-page): Add 'G_' call for "User
creation".
2019-05-09 12:11:36 +02:00
063edf928a
gnu: Add python-pylibmc.
...
* gnu/packages/databases.scm (python-pylibmc, python2-pylibmc): New variables.
2019-05-09 00:22:38 -04:00
da6026792b
gnu: Add libmemcached.
...
* gnu/packages/databases.scm (libmemcached): New variable.
2019-05-09 00:22:37 -04:00
c526b3176f
gnu: linux-libre: Update to 5.0.14.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.14.
(%linux-libre-hash): Update hash.
2019-05-08 22:51:27 -04:00
013130cf0b
gnu: linux-libre@4.19: Update to 4.19.41.
...
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.41.
(%linux-libre-4.19-hash): Update hash.
2019-05-08 22:19:29 -04:00
f9ab5c47bd
gnu: linux-libre@4.14: Update to 4.14.117.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.117.
(%linux-libre-4.14-hash): Update hash.
2019-05-08 22:18:13 -04:00
9902e3dfd8
gnu: linux-libre@4.9: Update to 4.9.174.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.174.
2019-05-08 22:17:31 -04:00
429a38a009
gnu: usbutils: Add ‘python’ output.
...
* gnu/packages/linux.scm (usbutils)[outputs]: Add ‘python’.
[arguments]: Add ‘separate-python-output’ phase.
2019-05-09 01:14:55 +02:00
a6592732cf
gnu: usbutils: Fix broken lsusb.py.
...
* gnu/packages/linux.scm (usbutils)[inputs]: Add python.
2019-05-09 01:14:55 +02:00
5b26635893
gnu: usbutils: Update to 012.
...
* gnu/packages/linux.scm (usbutils): Update to 012.
[arguments]: Add ‘patch-bootstrap-scripts’ phase.
[native-inputs]: Add autoconf, automake, and libtool.
2019-05-09 01:14:55 +02:00
26fad5b7df
gnu: mbpfan: Update to 2.1.1.
...
* gnu/packages/linux.scm (mbpfan): Update to 2.1.1.
2019-05-08 23:21:34 +02:00
b786ae69aa
gnu: dovecot: Update to 2.3.6.
...
* gnu/packages/mail.scm (dovecot): Update to 2.3.6.
2019-05-08 23:21:34 +02:00
Ricardo Wurmus