Commit Graph

17901 Commits (588bd05fcee63e6f3c141403d444e0ac4ef4ecdf)

Author SHA1 Message Date
Ricardo Wurmus 44436def9b
gnu: Add texlive-metapost.
* gnu/packages/tex.scm (texlive-metapost): New variable.
2017-07-09 17:07:37 +02:00
Ricardo Wurmus 406af0d663
gnu: Add texlive-latex-lh.
* gnu/packages/tex.scm (texlive-latex-lh): New variable.
2017-07-09 17:07:37 +02:00
Ricardo Wurmus ae3779d5cd
gnu: Add texlive-latex-eepic.
* gnu/packages/tex.scm (texlive-latex-eepic): New variable.
2017-07-09 17:07:37 +02:00
Ricardo Wurmus 1562763c0a
gnu: Add texlive-latex-eso-pic.
* gnu/packages/tex.scm (texlive-latex-eso-pic): New variable.
2017-07-09 17:07:36 +02:00
Ricardo Wurmus 83c830d1ac
gnu: Add texlive-fonts-ec.
* gnu/packages/tex.scm (texlive-fonts-ec): New variable.
2017-07-09 17:07:36 +02:00
Ricardo Wurmus 9186c1560b
gnu: Add texlive-generic-epsf.
* gnu/packages/tex.scm (texlive-generic-epsf): New variable.
2017-07-09 17:07:35 +02:00
Ricardo Wurmus cd2c77f434
gnu: Add texlive-latex-wasysym.
* gnu/packages/tex.scm (texlive-latex-wasysym): New variable.
2017-07-09 17:07:35 +02:00
Ricardo Wurmus acc620d6ed
gnu: Add texlive-latex-titlesec.
* gnu/packages/tex.scm (texlive-latex-titlesec): New variable.
2017-07-09 17:07:34 +02:00
Ricardo Wurmus 2db3a03445
gnu: Add texlive-latex-subfigure.
* gnu/packages/tex.scm (texlive-latex-subfigure): New variable.
2017-07-09 17:07:34 +02:00
Ricardo Wurmus d8fef6ea1f
gnu: Add texlive-fonts-stmaryrd.
* gnu/packages/tex.scm (texlive-fonts-stmaryrd): New variable.
2017-07-09 17:07:34 +02:00
Ricardo Wurmus adc02c70c2
gnu: Add texlive-latex-pdfpages.
* gnu/packages/tex.scm (texlive-latex-pdfpages): New variable.
2017-07-09 17:07:33 +02:00
Ricardo Wurmus da38b23595
gnu: Add texlive-latex-overpic.
* gnu/packages/tex.scm (texlive-latex-overpic): New variable.
2017-07-09 17:07:33 +02:00
Ricardo Wurmus ecffeeb54f
gnu: Add texlive-latex-multirow.
* gnu/packages/tex.scm (texlive-latex-multirow): New variable.
2017-07-09 17:07:32 +02:00
Ricardo Wurmus 02fd07b305
gnu: Add texlive-latex-jknapltx.
* gnu/packages/tex.scm (texlive-latex-jknapltx): New variable.
2017-07-09 17:07:32 +02:00
Ricardo Wurmus b2bc1daf98
gnu: Add texlive-latex-listings.
* gnu/packages/tex.scm (texlive-latex-listings): New variable.
2017-07-09 17:07:32 +02:00
Ricardo Wurmus 3921bc7c24
gnu: Add texlive-latex-footmisc.
* gnu/packages/tex.scm (texlive-latex-footmisc): New variable.
2017-07-09 17:07:31 +02:00
Ricardo Wurmus df2b9bb4de
gnu: Add texlive-latex-float.
* gnu/packages/tex.scm (texlive-latex-float): New variable.
2017-07-09 17:07:31 +02:00
Ricardo Wurmus 18ce343773
gnu: Add texlive-latex-fancyvrb.
* gnu/packages/tex.scm (texlive-latex-fancyvrb): New variable.
2017-07-09 17:07:31 +02:00
Ricardo Wurmus 20282111e5
gnu: Add texlive-latex-fancyhdr.
* gnu/packages/tex.scm (texlive-latex-fancyhdr): New variable.
2017-07-09 17:07:30 +02:00
Ricardo Wurmus 36ce05ffdd
gnu: Add texlive-latex-fancybox.
* gnu/packages/tex.scm (texlive-latex-fancybox): New variable.
2017-07-09 17:07:30 +02:00
Ricardo Wurmus e003a5f06d
gnu: Add texlive-latex-colortbl.
* gnu/packages/tex.scm (texlive-latex-colortbl): New variable.
2017-07-09 17:07:30 +02:00
Ricardo Wurmus b92ac281e5
gnu: Add texlive-latex-changebar.
* gnu/packages/tex.scm (texlive-latex-changebar): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus 1d3be84e73
gnu: Add texlive-latex-appendix.
* gnu/packages/tex.scm (texlive-latex-appendix): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus bda61541d5
gnu: Add texlive-latex-anysize.
* gnu/packages/tex.scm (texlive-latex-anysize): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus 137f9cbc88
gnu: Add texlive-latex-amsfonts.
* gnu/packages/tex.scm (texlive-latex-amsfonts): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus 98b4aca156
gnu: Add texlive-fonts-amsfonts.
* gnu/packages/tex.scm (texlive-fonts-amsfonts): New variable.
2017-07-09 17:07:28 +02:00
Ricardo Wurmus beb476ed77
gnu: texlive-generic-ifxetex: Fix description.
* gnu/packages/tex.scm (texlive-generic-ifxetex)[description]: Fix typo.
2017-07-09 17:07:28 +02:00
Ricardo Wurmus 05d28068ed
gnu: texlive-latex-oberdiek: Build ifpdf package.
* gnu/packages/tex.scm (texlive-latex-oberdiek)[arguments]: Only build the
"oberdiek.ins" package (which includes all other packages); patch file to
build "ifpdf.dtx" instead of "ifpdf.ins".
2017-07-09 17:07:28 +02:00
Ricardo Wurmus 702f23b3b8
gnu: texlive-latex-base: Fix xetex and xelatex formats.
* gnu/packages/tex.scm (texlive-latex-base)[arguments]: Build xetex and
xelatex formats with matching interpreters.
2017-07-09 17:07:27 +02:00
Ricardo Wurmus fed7200862
gnu: deeptools: Update to 2.5.1.
* gnu/packages/bioinformatics.scm (deeptools): Update to 2.5.1.
[arguments]: Remove.
[native-inputs]: Use "python-" instead of "python2-" variants.
[inputs]: Likewise; add python-py2bit.
2017-07-09 17:07:27 +02:00
Ricardo Wurmus eb2200f3bd
gnu: Add python-py2bit.
* gnu/packages/bioinformatics.scm (python-py2bit): New variable.
2017-07-09 17:07:23 +02:00
Ricardo Wurmus bdb31853f0
gnu: Add java-jgit-4.2.
* gnu/packages/version-control.scm (java-jgit-4.2): New variable.
2017-07-09 16:57:05 +02:00
Ricardo Wurmus 2613f5aff0
gnu: Add java-jgit.
* gnu/packages/version-control.scm (java-jgit): New variable.
2017-07-09 16:57:05 +02:00
Ricardo Wurmus f8e4d0224b
gnu: Add java-slf4j-api.
* gnu/packages/java.scm (java-slf4j-api): New variable.
2017-07-09 16:57:04 +02:00
Ricardo Wurmus eb270ecfdd
gnu: Add java-javaewah.
* gnu/packages/java.scm (java-javaewah): New variable.
2017-07-09 16:57:04 +02:00
Ricardo Wurmus 218d093b15
gnu: Add java-classpathx-servletapi
* gnu/packages/java.scm (java-classpathx-servletapi): New variable.
2017-07-09 16:57:03 +02:00
Tobias Geerinckx-Rice efd5a841e5
gnu: youtube-dl: Update to 2017.07.09.
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.09.
2017-07-09 15:58:35 +02:00
Marius Bakke ed40e7c5eb
gnu: libjpeg-turbo: Update to 1.5.2.
* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.2.
[arguments]<#:phases>: Remove.
2017-07-09 15:12:53 +02:00
Feng Shu e2155f58c0
gnu: you-get: Update to 0.4.775.
* gnu/packages/video.scm (you-get): Update to 0.4.775.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-07-09 21:27:37 +10:00
Leo Famulari b3cc304b30
gnu: poppler: Use an ABI-compatible replacement to fix CVE-2017-9776.
This is a followup to commit 95bbaa02aa.
See <https://bugs.gnu.org/27621> for more information.

Poppler 0.56.0's ABI is not compatible with Poppler 0.52.0, so it's not
possible to graft the newer version in place of the older one.

This change leaves CVE-2017-9775 unfixed for now.

* gnu/packages/patches/poppler-CVE-2017-9776.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler-0.56.0): Replace with ...
(poppler/fixed): ... new variable.
(poppler)[replacement]: Replaced with poppler/fixed.
2017-07-09 02:25:27 -04:00
Tobias Geerinckx-Rice 447f75825f
gnu: sshuttle: Update to 0.78.3.
* gnu/packages/vpn.scm (sshuttle): Update to 0.78.3.
2017-07-09 01:59:25 +02:00
Kei Kebreau 5143517c99
gnu: wxmaxima: Update to 17.05.0.
* gnu/packages/maths.scm (wxmaxima): Update to 17.05.0.
[source]: Update URL and add file-name.
[native-inputs]: Add autoconf, automake and gettext-minimal.
[arguments]: Add 'autoconf' phase.
2017-07-08 17:05:55 -04:00
Efraim Flashner fac2b430b9
gnu: font-gnu-unifont: Update to 10.0.04.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.04.
2017-07-08 23:49:29 +03:00
Ludovic Courtès 3512bd4d1c
gnu: wget: Update comment about test failures.
* gnu/packages/wget.scm (wget)[arguments]: Update comment.
2017-07-08 16:39:45 +02:00
Ludovic Courtès 2deb146f6d
gnu: libsoup: Adjust to new GnuTLS certificate-check behavior.
* gnu/packages/gnome.scm (libsoup)[arguments]: Add #:modules.
In 'pre-check' phase, invoke 'certtool'.
[native-inputs]: Add GNUTLS.
2017-07-08 16:39:40 +02:00
Ludovic Courtès 26c228f9b4
gnu: libsoup: Reindent.
* gnu/packages/gnome.scm (libsoup): Reindent.
2017-07-08 16:09:59 +02:00
Ben Woodcroft 4732e6ee84
gnu: blast+: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.  Add patch.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
* gnu/packages/patches/blast+-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-08 12:05:59 +10:00
Kei Kebreau f2fa86cc82
gnu: maxima: Ensure gcc is available at runtime.
* gnu/packages/maths.scm (maxima)[inputs]: Add gcc.
[arguments]: Use modify-phases syntax. Add 'set-gcc-path' phase.
2017-07-07 20:47:28 -04:00
Leo Famulari 0ca1e77c14
gnu: perl-dbd-mysql: Update to 4.043.
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.043.
2017-07-07 20:34:52 -04:00
Marius Bakke d28f90bed9
gnu: python-pyopenssl: Fix test failure on 32-bit platforms.
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pyopenssl)[source]: Use it.
2017-07-07 18:43:16 +02:00
Leo Famulari 4909eadfad
gnu: irssi: Update to 1.0.4 [fixes CVE-2017-{10965,10966}].
* gnu/packages/irc.scm (irssi): Update to 1.0.4.
2017-07-07 12:36:00 -04:00
Danny Milosavljevic acc0f6bb58
guix system: Add file system label and uuid to iso9660-image.
* gnu/system/vm.scm (system-disk-image): Pass root-label to ...
(iso9660-image): ... here.  Add keyword arguments #:file-system-label
and #:file-system-uuid.
2017-07-07 18:04:31 +02:00
Mark H Weaver 0b1e2ecb25
gnu: webkitgtk: Update to 2.16.5.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.16.5.
2017-07-07 11:54:01 -04:00
Ludovic Courtès 0b6e4f82fc
gnu: groff: Remove dependency on netpbm.
* gnu/packages/groff.scm (groff)[inputs]: Remove 'netpbm'.
2017-07-07 17:07:16 +02:00
Ludovic Courtès 7f0980839e
gnu: wget: Fix compilation with Perl 5.26; skip faulty tests.
* gnu/packages/wget.scm (wget)[arguments]: New field.
[source](patches): Add "wget-perl-5.26.patch".
* gnu/packages/patches/wget-perl-5.26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-07 17:07:16 +02:00
Ludovic Courtès c89e210788
gnu: Add basic support for powerpc64le-linux-gnu targets.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add
"powerpc64le-linux".
* gnu/packages/linux.scm (system->linux-architecture): Add "powerpc"
prefix.
(system->defconfig): Add "powerpc64le-" prefix.
2017-07-07 17:07:16 +02:00
Tobias Geerinckx-Rice 5826e7b11b
gnu: rdma-core: Update to 14.
* gnu/packages/linux.scm (rdma-core): Update to 14.
2017-07-07 15:24:14 +02:00
Tobias Geerinckx-Rice 5d3474c5a9
gnu: catimg: Update to 2.3.2.
* gnu/packages/image-viewers.scm (catimg): Update to 2.3.2.
2017-07-07 15:24:14 +02:00
Leo Famulari 642656a144
gnu: python-parsedatetime: Update to 2.4.
* gnu/packages/python.scm (python-parsedatetime, python2-parsedatetime):
Update to 2.4.
2017-07-07 01:23:12 -04:00
Leo Famulari 93013f1e79
gnu: python-icalendar: Update to 3.11.5.
* gnu/packages/python.scm (python-icalendar): Update to 3.11.5.
2017-07-07 01:23:08 -04:00
Alex Vong dab536fe1a
gnu: libtiff: Fix CVE-2017-{9936,10688}.
* gnu/packages/patches/libtiff-CVE-2017-9936.patch,
gnu/packages/patches/libtiff-CVE-2017-10688.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-07 00:06:37 -04:00
Kei Kebreau ab104672e1
gnu: xorg-server: Fix CVE-2017-{10971,10972}.
* gnu/packages/patches/xorg-server-CVE-2017-10971.patch,
gnu/packages/patches/xorg-server-CVE-2017-10972.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (xorg-server)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-06 23:52:22 -04:00
Alex Vong 96dcaa0ca9
gnu: youtube-dl: Update to 2017.07.02.
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.02.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2017-07-07 01:50:27 +02:00
Leo Famulari 0a66c38764
Revert "gnu: blast+: Update to 2.6.0."
This reverts commit 18dea67dc3.
2017-07-06 19:38:55 -04:00
Ludovic Courtès 5dfbd76971
gnu: shadow: Correctly match the system type.
* gnu/packages/admin.scm (shadow)[inputs]: Use 'string-contains' instead
of 'string-prefix?' when matching the system type.
2017-07-07 00:44:55 +02:00
Mark H Weaver 879b89d1ae
gnu: linux-libre@4.9: Update to 4.9.36.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.36.
2017-07-06 18:41:45 -04:00
Mark H Weaver 95f69e9cfc
gnu: linux-libre@4.4: Update to 4.4.76.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.76.
2017-07-06 18:40:43 -04:00
Tobias Geerinckx-Rice 856f68786f
gnu: iproute: Update to 4.12.0.
* gnu/packages/linux.scm (iproute): Update to 4.12.0.
2017-07-06 15:57:16 +02:00
Danny Milosavljevic 6b994438b0
gnu: ghostscript: Don't write CreationDate and ModDate header entries.
Followup to a64b174751.

* gnu/packages/ghostscript.scm (ghostscript)[source]: Don't write CreationDate
and ModDate header entries.
2017-07-06 12:18:28 +02:00
Rutger Helling d3f52500f3
gnu: xpra: Update to 2.0.3.
* gnu/packages/xorg.scm (xpra): Update to 2.0.3.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-07-06 13:28:08 +05:30
Efraim Flashner 8c6acc3efe
gnu: freeipmi: Remove readline from inputs.
This is a follow-up to 694b7c3180.

* gnu/packages/freeimpi.scm (freeipmi)[inputs]: Really remove readline.
2017-07-06 09:45:52 +03:00
Efraim Flashner 694b7c3180
gnu: freeipmi: Update to 1.5.6.
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.5.6.
[inputs]: Remove readline.
2017-07-06 09:39:09 +03:00
Danny Milosavljevic 5bc42e1a46
gnu: netpbm: Remove timestamps.
Fixes <https://bugs.gnu.org/27567>.

* gnu/packages/netpbm.scm (netpbm)[source]: Remove timestamps.
2017-07-06 02:20:33 +02:00
Danny Milosavljevic a64b174751
gnu: ghostscript: Make build reproducible.
Fixes <https://bugs.gnu.org/27563>.

* gnu/packages/ghostscript.scm (ghostscript)[source]: Remove timestamps.
2017-07-06 02:19:15 +02:00
Tobias Geerinckx-Rice 08094dc926
gnu: zstd: Update to 1.3.0.
* gnu/packages/compression.scm (zstd): Update to 1.3.0.
2017-07-06 01:28:05 +02:00
Tobias Geerinckx-Rice 6c69663400
gnu: libvirt: Update to 3.5.0.
* gnu/packages/qemu.scm (libvirt): Update to 3.5.0.
2017-07-06 01:28:05 +02:00
Tobias Geerinckx-Rice ab3cac3785
gnu: bash-completion: Update to 2.6.
* gnu/packages/bash.scm (bash-completion): Update to 2.6.
2017-07-06 01:28:05 +02:00
Marius Bakke a6a979cba3
gnu: mariadb: Update to 10.1.25.
* gnu/packages/databases.scm (mariadb): Update to 10.1.25.
2017-07-06 00:15:14 +02:00
Marius Bakke 79937f72c3
gnu: strace: Update to 4.18.
* gnu/packages/linux.scm (strace): Update to 4.18.
2017-07-06 00:15:13 +02:00
Marius Bakke ece8bb3812
gnu: xscreensaver: Update to 5.37.
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.37.
2017-07-06 00:15:13 +02:00
Ludovic Courtès ad01c7aa14
gnu: artanis: Update source URL.
* gnu/packages/guile.scm (artanis)[source]: Change URL to mirror://gnu.
2017-07-06 00:02:41 +02:00
Efraim Flashner 298fd38b4b
gnu: julia: Add support for aarch64-linux.
* gnu/packages/julia.scm (julia)[arguments]: Add make-flag argument for
aarch64-linux.
[supported-systems]: Add aarch64-linux.
2017-07-05 20:26:46 +03:00
Efraim Flashner cdc827b3f3
gnu: gcompris: Update to 17.05.
* gnu/packages/education.scm (gcompris): Update to 17.05.
2017-07-05 12:40:40 +03:00
Efraim Flashner 0dd8791922
gnu: gcc@6: Update to 6.4.0.
* gnu/packages/gcc.scm (gcc@6, gfortran@6): Update to 6.4.0.
2017-07-05 08:31:46 +03:00
Leo Famulari 7550f8eaeb
gnu: net-tools: Remove `hostname` from description.
This is a followup to commit c9e0a44eec.

* gnu/packages/linux.scm (net-tools)[description]: Update description.
2017-07-05 00:35:37 -04:00
Leo Famulari e048de6098
gnu: inet-utils: Mention `hostname` in description.
* gnu/packages/admin.scm (inetutils)[description]: Update description.
2017-07-05 00:35:28 -04:00
Stefan Reichör 2d677f84f4
gnu: tmux: Update to 2.5.
* gnu/packages/tmux.scm (tmux): Update to 2.5.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-05 00:24:02 +02:00
ng0 32f9cc3386
gnu: alpine: Use new URL.
* gnu/packages/mail.scm (alpine)[source]: Use new URL for download.
(home-page): Use new URL.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-05 00:24:02 +02:00
Ludovic Courtès 425ab478ac
gnu: shepherd: Allow cross-compilation.
* gnu/packages/admin.scm (shepherd)[native-inputs]: Add GUILE-2.0.
2017-07-04 23:45:12 +02:00
Ludovic Courtès ba4aca3ae4
gnu: util-linux: Fix cross-compilation.
* gnu/packages/linux.scm (util-linux)[inputs]: Add NET-BASE
when (%current-target-system) is true.  Fixes cross-compilation.
2017-07-04 23:45:12 +02:00
Ludovic Courtès 6d9a859038
linux-initrd: Avoid monadic style a bit.
* gnu/system/linux-initrd.scm (expression->initrd): Use 'program-file'
for 'init'.
(flat-linux-module-directory): Use 'computed-file' instead of
'gexp->derivation'.
(raw-initrd): Adjust accordingly.
2017-07-04 23:45:12 +02:00
Feng Shu e208bf789c
gnu: emacs-exwm-x: Update to 1.6.2.
* gnu/packages/emacs.scm (emacs-exwm-x): Update to 1.6.2.
2017-07-04 22:03:15 +02:00
Feng Shu adaebe80fb
gnu: emacs-switch-window: Update to 1.5.1.
* gnu/packages/emacs.scm (emacs-switch-window): Update to 1.5.1.
2017-07-04 22:02:12 +02:00
Efraim Flashner ce7e361fa3
gnu: gemma: Fix building on non-Intel architectures.
* gnu/packages/patches/gemma-intel-compat.patch: New file.
* gnu/packages/bioinformatics.scm (gemma)[source]: Add patch.
[arguments]: Add NO_INTEL_COMPAT flag on non-Intel architectures.
* gnu/local.mk (dist_patch_DATA): Register patch.
2017-07-04 22:55:44 +03:00
Arun Isaac 0545e43a91
gnu: gajim: Update to 0.16.8.
* gnu/packages/messaging.scm (gajim): Update to 0.16.8.
[source]: Remove patch.
* gnu/packages/patches/gajim-CVE-2016-10376.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-04 23:07:15 +05:30
宋文武 296bf4d5ab
services: Add 'sysctl-service-type'.
* gnu/services/sysctl.scm: New file.
* doc/guix.texi (Miscellaneous Services): Document it.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2017-07-04 20:40:51 +08:00
Ben J Woodcroft a522517cdb
gnu: diamond: Update to 0.9.9.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.9.
2017-07-04 19:59:01 +10:00
Ben Woodcroft 18dea67dc3
gnu: blast+: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
2017-07-04 19:58:42 +10:00
Mark H Weaver c24ea83cd7
gnu: linux-libre: Update to 4.12.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.11-i686.conf,
gnu/packages/aux-files/linux-libre/4.11-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.12-i686.conf,
gnu/packages/aux-files/linux-libre/4.12-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Update accordingly.
2017-07-04 04:24:58 -04:00
Efraim Flashner fdaf6cd345
gnu: qt: Update to 5.9.1.
* gnu/packages/qt.scm (qtbase, qtsvg, qtimageformats, qtx11extras)
(qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors)
(qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel)
(qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2)
(qtgraphicaleffects, qtgamepad, qtscxml, qtpurchasing, qtcanvas3d)
(qtcharts, qtdatavis3d, qtwebkit): Update to 5.9.1.
(qtwebkit)[source]: Change to official qt location.
2017-07-04 08:55:00 +03:00