Commit Graph

19740 Commits

Author SHA1 Message Date
Ludovic Courtès 5e66574a12
activation: Do not create setuid binaries in the store [security fix].
Fixes <https://bugs.gnu.org/28751>.

* gnu/build/activation.scm (activate-setuid-programs)[link-or-copy]: Remove.
Use 'copy-file' instead.
2017-10-08 21:27:48 +02:00
Leo Famulari d265169b36
gnu: borg: Update to 1.1.0.
* gnu/packages/backup.scm (borg): Update to 1.1.0.
[native-inputs]: Replace python-sphinx-rtd-theme with
python-guzzle-sphinx-theme.
2017-10-08 13:36:21 -04:00
Leo Famulari d7eb680d85
gnu: Add python-guzzle-sphinx-theme.
* gnu/packages/python.scm (python-guzzle-sphinx-theme,
python2-guzzle-sphinx-theme): New variables.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
2017-10-08 13:36:20 -04:00
Thomas Danckaert 3ceb70e1e6
gnu: kdevelop: Do not hardcode user profile locations in wrapper.
* gnu/packages/kde.scm (kdevelop): [arguments]: Do not add
  ${HOME}/.guix-profile/{share,lib/plugins} to XDG_DATA_DIRS and
  QT_PLUGIN_PATH when wrapping the executable.
2017-10-08 19:07:46 +02:00
Christopher Baines 02bc41c4ce
tests: databases: Add a simple test for MySQL.
Previously, the activation phase for this service caused some systems using it
to not boot. This test checks that it's possible to boot a system using it,
and at least start the service.

* gnu/tests/databases.scm (%mysql-os, %test-mysql): New variables.
  (run-mysql-test): New procedure.
2017-10-08 17:31:49 +01:00
Christopher Baines b36e06c2b0
linux-initrd: Ensure that the guile used in the initrd is referenced.
By referencing guile from the initrd output explicitly, it will be present in
the store when this initrd is used. If the exact guile used within the initrd
isn't present in the store, then after root is switched during the boot
process, loading modules (such as (ice-9 popen)) won't work.

This fixes guix-patches bug #28399, "Fix mysql activation, and add a basic
test".

* gnu/system/linux-initrd.scm (expression->initrd)[builder]: Write out a file
  called references in to the initrd output, which includes the store path for
  guile.
2017-10-08 17:31:49 +01:00
Tobias Geerinckx-Rice fe90a6e08b
gnu: youtube-dl: Update to 2017.10.07.
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.07.
2017-10-08 17:49:47 +02:00
Tobias Geerinckx-Rice 71b7950e24
gnu: offlineimap: Update to 7.1.3.
* gnu/packages/mail.scm (offlineimap): Update to 7.1.3.
2017-10-08 17:49:47 +02:00
Ludovic Courtès 60273031e8
services: Remove unneeded imported.
This caused a circular dependency.
Reported by Oleg Pykhalov <go.wigust@gmail.com>
at <https://lists.gnu.org/archive/html/help-guix/2017-10/msg00021.html>.

* gnu/services/networking.scm: Remove unneeded import of (gnu system
base).
2017-10-08 17:43:51 +02:00
Tobias Geerinckx-Rice be6a1c2d39
gnu: gnome-calendar: Update to 3.26.2.
* gnu/packages/gnome.scm (gnome-calendar): Update to 3.26.2.
2017-10-08 17:06:16 +02:00
Tobias Geerinckx-Rice de1a32a41a
gnu: par2cmdline: Update to 0.7.4.
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.4.
2017-10-08 17:06:15 +02:00
Tobias Geerinckx-Rice 5578a9c64b
gnu: munge: Update to 0.5.13.
* gnu/packages/admin.scm (munge): Update to 0.5.13.
2017-10-08 17:06:14 +02:00
Kei Kebreau 226e57d674
gnu: aisleriot: Update to 3.22.3.
* gnu/packages/gnome.scm (aisleriot): Update to 3.22.3.
[inputs]: Use guile-2.2 instead of guile-2.0.
2017-10-08 11:02:40 -04:00
Christopher Baines 6626c54ddf
gnu: Add missing mongodb patch to local.mk.
* gnu/local.mk (dist_patch_DATA): Add the
  mongodb-support-unknown-linux-distributions.patch.
2017-10-08 15:11:04 +01:00
Christopher Baines 834dc83069
web: Add nginx-documentation.
* gnu/packages/web.scm (nginx): Add comment about updating the documentation.
  (nginx-xslscript): New variable.
  (nginx-documentation): New variable.
2017-10-08 14:30:30 +01:00
Christopher Baines 024d37d119
perl: Add perl-parse-recdescent.
* gnu/packages/perl.scm (perl-parse-recdescent): New variable.
2017-10-08 14:30:25 +01:00
Tomáš Čech 3eabcc7878
gnu: Add missing input to python-py3status and fix call path.
file is used to determine configuration file encoding and py3status fails to
start when this tool is missing.

* gnu/packages/python.scm (python-py3status)[inputs]: Add file.
  [arguments]: Modify phases to patch py3status to call file with an absolute
  path.
2017-10-08 13:03:07 +02:00
Oleg Pykhalov 3803331803
gnu: sdl: Add debug output.
* gnu/packages/sdl.scm (sdl, sdl-gfx, sdl-image, sdl-mixer, sdl-net, sdl-ttf):
  Add debug output.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-07 23:01:52 +02:00
ng0 06ebba151b
gnu: getmail: Update to 5.4.
* gnu/packages/mail.scm (getmail): Update to 5.4.
2017-10-07 21:56:22 +02:00
Leo Famulari 3202d601a8
gnu: khal: Update to 0.9.8.
* gnu/packages/calendar.scm (khal): Update to 0.9.8.
[arguments]: Make sure to stop building if the documentation fails to
build.  Skip some failing tests.
2017-10-07 13:14:50 -04:00
Ludovic Courtès 9070ca4479
gnu: zile: Update to 2.4.14.
* gnu/packages/zile.scm (zile): Update to 2.4.14.
2017-10-07 17:08:32 +02:00
Ben Woodcroft 3ae76f7f57
gnu: vsearch: Update to 2.5.0.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.5.0.
2017-10-07 09:42:55 +10:00
Mark H Weaver ecfcb2e048
gnu: linux-libre: Update to 4.13.5.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.5.
(%linux-libre-hash): Update hash.
2017-10-06 18:29:05 -04:00
Mark H Weaver 4556703783
gnu: linux-libre@4.9: Update to 4.9.53.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.53.
2017-10-06 18:28:26 -04:00
Mark H Weaver 428951b84f
gnu: linux-libre@4.4: Update to 4.4.90.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.90.
2017-10-06 18:27:45 -04:00
Ludovic Courtès 90d23ed9df
system: Really filter out Linux device names for the store.
This is a followup to db4e8fd5d4.
Fixes <https://bugs.gnu.org/28445>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/system.scm (ensure-not-/dev): New procedure.
(read-boot-parameters)[ensure-not-/dev]: Remove.
(operating-system-boot-parameters): Use it.
2017-10-07 00:05:18 +02:00
Christopher Baines 5266ff719e
services: Add MongoDB.
* gnu/services/databases.scm (%default-mongodb-configuration-file,
  %mongodb-accounts, mongodb-service-type): New variables.
  (<mongodb-configuration>): New record type.
  (mongodb-activation, mongodb-shepherd-service): New procedures.
* gnu/tests/databases.scm (%test-mongodb): New variable.
* doc/guix.texi (Database Services): Add MongoDB documentation.
2017-10-06 21:24:30 +01:00
Christopher Baines 6bbbca9073
gnu: Add mongodb.
* gnu/packages/databases.scm (mongodb): New variable.
2017-10-06 21:24:23 +01:00
Tobias Geerinckx-Rice 4bbc27aca0
gnu: btrfs-progs: Update to 4.13.2.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.13.2.
2017-10-06 17:33:52 +02:00
Efraim Flashner 2320d4f058
gnu: glibc-locales: Use 'modify-phases' syntax.
* gnu/packages/base.scm (glibc-locales)[arguments]: Use 'modify-phases'
syntax.
2017-10-06 16:00:11 +03:00
Ludovic Courtès 1738e24455
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix): Update to 8b920d7.
2017-10-06 14:43:31 +02:00
Tobias Geerinckx-Rice 8bde6a524e
gnu: dconf: Update to 0.26.1.
* gnu/packages/gnome.scm (dconf): Update to 0.26.1.
2017-10-06 01:00:59 +02:00
Tobias Geerinckx-Rice 4a79befe2c
gnu: glade: Update to 3.20.1.
* gnu/packages/gnome.scm (glade): Update to 3.20.1.
2017-10-06 01:00:58 +02:00
Tobias Geerinckx-Rice 6c97f17fa1
gnu: tor: Enable directory protocol compression.
* gnu/packages/tor.scm (tor)[native-inputs]: Add pkg-config.
[inputs]: Add xz and zstd.
2017-10-06 01:00:49 +02:00
Tobias Geerinckx-Rice b519d46269
gnu: tor: Fix typo.
* gnu/packages/tor.scm (tor)[inputs]: Move unquote to its operand.
2017-10-06 01:00:11 +02:00
Arun Isaac 5ca4fe9696
gnu: octave: Reference makeinfo with absolute path.
* gnu/packages/maths.scm (octave)[arguments]: Add configure-makeinfo phase.
[inputs]: Add texinfo.
[native-inputs]: Remove texinfo.
2017-10-06 03:34:59 +05:30
Marius Bakke 7006370e59
gnu: vte-ng: Update to 0.50.1.a.
* gnu/packages/gnome.scm (vte-ng): Update to 0.50.1.a.
2017-10-05 20:28:33 +02:00
Marius Bakke 3f697ff2e8
gnu: openjpeg: Update to 2.3.0.
* gnu/packages/patches/openjpeg-CVE-2017-12982.patch,
gnu/packages/patches/openjpeg-CVE-2017-14040.patch,
gnu/packages/patches/openjpeg-CVE-2017-14041.patch,
gnu/packages/patches/openjpeg-CVE-2017-14151.patch,
gnu/packages/patches/openjpeg-CVE-2017-14152.patch,
gnu/packages/patches/openjpeg-CVE-2017-14164.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/image.scm (openjpeg): Update to 2.3.0.
[source](patches): Remove.
* gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Adjust openjpeg
substitution.
2017-10-05 20:28:32 +02:00
Marius Bakke 6d89a1ab4e
gnu: imagemagick: Update to 6.9.9-18.
Fixes <https://bugs.gnu.org/28692>.
Reported by Diego Nicola Barbato <dnbarbato@posteo.de>.

* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-18.
2017-10-05 20:14:13 +02:00
Leo Famulari 6cdd8c97b7
gnu: libpng@1.2: Update to 1.2.59.
* gnu/packages/image.scm (libpng-1.2): Update to 1.2.59.
2017-10-05 10:42:36 -04:00
Leo Famulari eb93f1c9c4
gnu: certbot, python-acme: Update to 0.19.0.
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.19.0.
2017-10-05 10:38:52 -04:00
Kei Kebreau 5fe56448f3
gnu: lightning: Update to 2.1.2.
* gnu/packages/assembly.scm (lightning): Update to 2.1.2.
2017-10-05 10:36:06 -04:00
Ricardo Wurmus 227dbd841a
gnu: Add pdsh.
* gnu/packages/ssh.scm (pdsh): New variable.
2017-10-05 15:17:26 +02:00
Dave Love 04717e9406
gnu: Add imb-openmpi.
* gnu/packages/benchmark.scm (imb): New procedure.
(imb-openmpi): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-05 12:09:17 +02:00
Ludovic Courtès dd41a7f8d8
file-systems: Add a 'location' field to <file-system>.
* gnu/system/file-systems.scm (<file-system>)[location]: New field.
2017-10-05 12:09:17 +02:00
Ludovic Courtès aed1f1b049
uuid: Add 'uuid=?' and use it.
* gnu/system/uuid.scm (uuid=?): New procedure.
* tests/uuid.scm ("uuid=?"): New test.
* gnu/build/file-systems.scm (partition-uuid-predicate)
(luks-partition-uuid-predicate): Use it instead of 'bytevector=?'.
2017-10-05 12:09:17 +02:00
Ricardo Wurmus 67a08f1809
gnu: Add python-numpy-next.
* gnu/packages/python.scm (python-numpy-next, python2-numpy-next): New
variables.
2017-10-05 12:04:32 +02:00
Ricardo Wurmus eaa1db1de6
Revert "gnu: python-numpy: Update to 1.13.1."
This reverts commit 025b196d9b.

This is necessary as neither the current release nor the latest development
version of python-pandas can be build with numpy 1.13.x.
2017-10-05 12:04:32 +02:00
Kei Kebreau 46cf31868c
gnu: curl: Update replacement to 7.56.0 [security fixes].
Fixes CVE-2017-1000254.
See <https://curl.haxx.se/docs/adv_20171004.html> for details.

* gnu/packages/curl.scm (curl)[replacement]: Update to 7.56.0.
(curl-7.55.0): Rename to ...
(curl-7.56.0): ... this.
[arguments]: Remove 'fix-Makefile' phase.
[source]: Remove patch.
* gnu/packages/patches/curl-bounds-check.patch: Delete it.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-10-04 19:37:55 -04:00
Leo Famulari 488d380c82
gnu: go: update to 1.9.1 [security fixes].
See the release announcement and bug reports for more details about the
security issues fixed in this release:

https://groups.google.com/forum/m/#!topic/golang-nuts/sHfMg4gZNps
https://golang.org/issue/22125
https://golang.org/issue/22134

* gnu/packages/golang.scm (go-1.9): Update to 1.9.1.
2017-10-04 19:08:09 -04:00