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42201 Commits

Author SHA1 Message Date
Ricardo Wurmus 1adcbeda5f
gnu: r-ncdf4: Update to 1.16.1. 
* gnu/packages/cran.scm (r-ncdf4): Update to 1.16.1.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 5e16dff99c
gnu: r-sjlabelled: Update to 1.0.17. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.0.17.
[propagated-inputs]: Remove r-broom, r-prediction, and r-snakecase; add
r-insight.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 83bfddd1b0
gnu: r-gmp: Update to 0.5-13.5. 
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.5.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus ae7e6f0620
gnu: r-mcmc: Update to 0.9-6. 
* gnu/packages/cran.scm (r-mcmc): Update to 0.9-6.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 7e6c5ebbea
gnu: r-gamlss-dist: Update to 5.1-3. 
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.1-3.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 1a38c31456
gnu: r-future: Update to 1.12.0. 
* gnu/packages/cran.scm (r-future): Update to 1.12.0.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 5ccf16c746
gnu: r-msir: Update to 1.3.2. 
* gnu/packages/cran.scm (r-msir): Update to 1.3.2.
[propagated-inputs]: Remove r-rgl.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus fc82a8f577
gnu: r-e1071: Update to 1.7-1. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 6720b37810
gnu: r-purrr: Update to 0.3.2. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.2.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 08859c8d27
gnu: r-mclust: Update to 5.4.3. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.3.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus c17ee12cf7
gnu: r-robustbase: Update to 0.93-4. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-4.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus e469e10e20
gnu: r-zip: Update to 2.0.1. 
* gnu/packages/cran.scm (r-zip): Update to 2.0.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 35fe7882a8
gnu: r-tinytex: Update to 0.11. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.11.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 76cbfb5ad5
gnu: r-processx: Update to 3.3.0. 
* gnu/packages/cran.scm (r-processx): Update to 3.3.0.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 78e2973827
gnu: r-cli: Update to 1.1.0. 
* gnu/packages/cran.scm (r-cli): Update to 1.1.0.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 5275f9d7f9
gnu: r-ordinal: Update to 2019.3-9. 
* gnu/packages/cran.scm (r-ordinal): Update to 2019.3-9.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 739135b2be
gnu: r-lmoments: Update to 1.3-1. 
* gnu/packages/cran.scm (r-lmoments): Update to 1.3-1.
[propagated-inputs]: Add r-rcpp and r-rcpparmadillo.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 06070c0397
gnu: r-rcpp: Update to 1.0.1. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus b21eb34776
gnu: r-glue: Update to 1.3.1. 
* gnu/packages/cran.scm (r-glue): Update to 1.3.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus f9bc918b81
gnu: r-colorspace: Update to 1.4-1. 
* gnu/packages/cran.scm (r-colorspace): Update to 1.4-1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 50d063b511
gnu: r-readxl: Update to 1.3.1. 
* gnu/packages/cran.scm (r-readxl): Update to 1.3.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 1d7049335f
gnu: r-rmarkdown: Update to 1.12. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.12.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 33fba4cea8
gnu: r-rcpparmadillo: Update to 0.9.200.7.1. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.7.1.
[native-inputs]: Add ghc-pandoc, ghc-pandoc-citeproc, and r-rmarkdown.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 2391e97c4d
gnu: r-httpuv: Update to 1.5.0. 
* gnu/packages/cran.scm (r-httpuv): Update to 1.5.0.
[native-inputs]: Remove pkg-config; move r-rcpp from here...
[propagated-inputs]: ...to here; add r-r6.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus c2b45ac578
gnu: r-diversitree: Update to 0.9-11. 
* gnu/packages/bioinformatics.scm (r-diversitree): Update to 0.9-11.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 1081e8266f
gnu: r-rstudioapi: Update to 0.10. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.10.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 086ca4deae
gnu: r-git2r: Update to 0.25.2. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.25.2.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 7590441976
gnu: r-tibble: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-tibble): Update to 2.1.1.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 86c8b2f5f5
gnu: r-knitr: Update to 1.22. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.22.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus b6c5b0aca2
gnu: r-highr: Update to 0.8. 
* gnu/packages/statistics.scm (r-highr): Update to 0.8.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 1f2862b1be
gnu: r-lazyeval: Update to 0.2.2. 
* gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.2.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus a9c8127290
gnu: r-stringi: Update to 1.4.3. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.4.3.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 2bf224d0ca
gnu: r-permute: Update to 0.9-5. 
* gnu/packages/statistics.scm (r-permute): Update to 0.9-5.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 35663627fb
gnu: r-matrix: Update to 1.2-16. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-16.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 95bf4508e5
gnu: qtractor: Update to 0.9.6. 
* gnu/packages/music.scm (qtractor): Update to 0.9.6.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 8e91ad0b5c
gnu: r-ape: Update to 5.3. 
* gnu/packages/cran.scm (r-ape): Update to 5.3.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus db39269c89
gnu: r-maldiquant: Update to 1.19.2. 
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.19.2.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 42f344faf7
gnu: Add r-libcoin. 
* gnu/packages/cran.scm (r-libcoin): New variable.
 2019-03-21 00:02:48 +01:00
Ricardo Wurmus d1021421d9
gnu: r-callr: Update to 3.2.0. 
* gnu/packages/cran.scm (r-callr): Update to 3.2.0.
 2019-03-21 00:02:48 +01:00
Ricardo Wurmus df04509932
gnu: r-dendextend: Update to 1.10.0. 
* gnu/packages/cran.scm (r-dendextend): Update to 1.10.0.
 2019-03-21 00:02:48 +01:00
Ricardo Wurmus ffd6e2fd8f
gnu: r-sys: Update to 3.1. 
* gnu/packages/cran.scm (r-sys): Update to 3.1.
 2019-03-21 00:02:48 +01:00
Ricardo Wurmus 28d0eb2565
gnu: r-diversitree: Fix typo. 
* gnu/packages/bioinformatics.scm (r-diversitree)[propagated-inputs]: Fix typo
in package labels.
 2019-03-21 00:02:48 +01:00
Ricardo Wurmus d14c770d55
gnu: Add r-insight. 
* gnu/packages/cran.scm (r-insight): New variable.
 2019-03-21 00:02:48 +01:00
Mark H Weaver 8b672b2c48
gnu: blender: Restore version 2.79b for systems without OpenGL 3. 
Fixes <https://bugs.gnu.org/33882>.

* gnu/packages/graphics.scm (blender-2.79): New variable.
(blender)[description]: Remove obsolete claim that the stable
release no longer works in Guix.
* gnu/packages/patches/blender-2.79-newer-ffmpeg.patch,
gnu/packages/patches/blender-2.79-python-3.7-fix.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2019-03-20 18:20:36 -04:00
Ricardo Wurmus 933cc19684
gnu: r-annotationhub: Update to 2.14.5. 
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.5.
 2019-03-20 22:32:37 +01:00
Ricardo Wurmus e49d5d34ed
gnu: r-genomicfeatures: Update to 1.34.6. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.6.
 2019-03-20 22:32:32 +01:00
Ricardo Wurmus 2b83d218d8
gnu: r-variantannotation: Update to 1.28.13. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.13.
 2019-03-20 22:32:25 +01:00
Ricardo Wurmus 0adb6f207b
gnu: r-category: Update to 2.48.1. 
* gnu/packages/bioinformatics.scm (r-category): Update to 2.48.1.
 2019-03-20 22:32:17 +01:00
Ricardo Wurmus e014dc78f0
gnu: r-dexseq: Update to 1.28.3. 
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.3.
 2019-03-20 22:32:11 +01:00
Ricardo Wurmus 877fd189c4
gnu: r-annotate: Update to 1.60.1. 
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.60.1.
 2019-03-20 22:31:59 +01:00