Commit Graph

14671 Commits

Author SHA1 Message Date
Marius Bakke 63d62305c3
gnu: Remove obsolete numpy comment.
* gnu/packages/python.scm: Remove comment.
2017-03-09 16:39:08 +01:00
Marius Bakke ed6a21b45f
gnu: inetutils: Disable parallel tests.
* gnu/packages/admin.scm (inetutils)[arguments]: Add #:parallel-tests? #f.
2017-03-09 16:39:08 +01:00
Marius Bakke ce79279d34
gnu: python-pandas: Really fix build on 32bit.
* gnu/packages/patches/python-pandas-skip-failing-tests.patch: Fix confusion
with same-named test.
2017-03-09 16:39:08 +01:00
Thomas Danckaert 0da4f3659a
gnu: Add rsnapshot.
* gnu/packages/backup.scm (rsnapshot): New variable.
2017-03-09 12:29:23 +01:00
Mark H Weaver 7b1866d783
gnu: python-fake-factory: Add back missing patch file.
This reverts the removal of "python-fake-factory-fix-build-32bit.patch"
by commit ce7911ddae.

* gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-03-09 06:08:18 -05:00
Leo Famulari 483188b76e
gnu: inetutils: Set the $localstatedir.
This is a followup to commit 6f5d28f9d0.

* gnu/packages/admin.scm (inetutils)[arguments]: Pass
'--localstatedir=/var' to #:configure-flags.
2017-03-09 05:00:29 -05:00
Mark H Weaver 1fa8a51ecc
gnu: icecat: Add fixes from upstream Firefox ESR 45.8.0.
Includes fixes for CVE-2017-5398, CVE-2017-5400, CVE-2017-5401, CVE-2017-5402,
CVE-2017-5404, CVE-2017-5405, CVE-2017-5407, CVE-2017-5408, CVE-2017-5409, and
CVE-2017-5410.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr45 repository.
2017-03-09 03:58:29 -05:00
Mark H Weaver c9b631aef4
gnu: icecat: Update to 45.7.0-gnu1.
* gnu/packages/gnuzilla.scm (icecat): Update to 45.7.0-gnu1.  Remove patches
included in 45.7.0.
2017-03-09 03:58:27 -05:00
Ricardo Wurmus f2ac937924
gnu: r: Remove obsolete configure flags.
* gnu/packages/statistics.scm (r)[arguments]: Remove obsolete configure flags.
2017-03-09 07:38:24 +01:00
Ricardo Wurmus f7db12022c
gnu: r: Update to 3.3.3.
* gnu/packages/statistics.scm (r): Update to 3.3.3.
2017-03-09 07:38:24 +01:00
Roel Janssen c49840f8d4
gnu: Add lensfun.
* gnu/packages/photo.scm (lensfun): New variable.
2017-03-08 23:49:24 +01:00
Ludovic Courtès d75e8f36a8
packages: Use PACKAGE@VERSION syntax when reporting ambiguities.
* gnu/packages.scm (%find-package): Upon ambiguity, use the
PACKAGE@VERSION syntax instead of 'package-full-name'.
2017-03-08 23:42:53 +01:00
Ludovic Courtès 64f34aefe7
gnu: Add guile2.2-haunt.
* gnu/packages/guile.scm (guile2.2-haunt): New variable.
2017-03-08 23:42:53 +01:00
Ludovic Courtès 517fce6327
gnu: Add guile2.2-reader.
* gnu/packages/guile.scm (guile2.2-reader): New variable.
2017-03-08 23:42:53 +01:00
Ludovic Courtès 77aa0887e1
gnu: guile-reader: Update to 0.6.2.
* gnu/packages/guile.scm (guile-reader): Update to 0.6.2.
[arguments]: Remove.
2017-03-08 23:42:53 +01:00
Ludovic Courtès 1099988904
services: prosody: Use 'id' to introduce unhygienic top-level identifiers.
* gnu/services/messaging.scm (define-all-configurations): Use 'id' to
introduce raw/literal/unhygienic top-level identifiers.  Fixes
compilation with Guile 2.2.
2017-03-08 23:42:52 +01:00
Ludovic Courtès 5d1ee4d7bc
services: prosody: Make sure 'id' is available at expansion time.
* gnu/services/messaging.scm (id): Use 'define-syntax-rule' instead of
'define' to make sure 'id' is available at expansion time.
2017-03-08 23:42:52 +01:00
Ludovic Courtès beb1e8067d
gnu: Remove unneeded imports.
* gnu/packages/backup.scm: Remove unneeded (guix build utils) import.
* gnu/packages/finance.scm: Likewise.
2017-03-08 23:42:52 +01:00
Maxim Cournoyer 6f5d28f9d0
gnu: inetutils: Enable tests.
* gnu/packages/admin.scm (inetutils)[arguments]: Remove '#:tests? #f'
and #:configure-flags.
[native-inputs]: Add net-tools.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-03-08 13:11:59 -05:00
Marius Bakke b03ee02f0d
gnu: python-pandas: Fix build on 32-bit.
* gnu/packages/patches/python-pandas-skip-failing-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pandas, python2-pandas): Use it.
2017-03-08 18:04:23 +01:00
Marius Bakke ce7911ddae
gnu: Add python-faker.
* gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Adjust
paths. Also rename to ...
* gnu/packages/patches/python-faker-fix-build-32bit.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python.scm (python-faker, python2-faker): New variables.
(python-fake-factory)[properties]: Superseded by PYTHON-FAKER.
(python2-fake-factory)[properties]: Superseded by PYTHON2-FAKER.
(python-orator, python2-orator)[propagated-inputs]: Replace
PYTHON-FAKE-FACTORY with PYTHON-FAKER.
2017-03-08 18:00:43 +01:00
Thomas Danckaert 1eaaea41e5
gnu: python-matplotlib-documentation: Fix build.
* gnu/packages/python.scm (python-matplotlib-documentation)[native-inputs]:
Add python-mock and graphviz.
[arguments]: Use separate build and install phases; correctly set latex paper size.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-08 17:39:00 +01:00
Marius Bakke 9c974c9366
gnu: iperf: Update to 3.1.7.
* gnu/packages/networking.scm (iperf): Update to 3.1.7.
2017-03-08 17:37:51 +01:00
Marius Bakke 3a38cf2dfd
gnu: libinput: Update to 1.6.3.
* gnu/packages/freedesktop.scm (libinput, libinput-minimal): Update to 1.6.3.
2017-03-08 17:18:11 +01:00
Ricardo Wurmus beaa026aa7
gnu: r: Fix more reproducibility problems.
* gnu/packages/statistics.scm (r)[arguments]: Patch locations in the
build system that need special treatment for reproducibility.
2017-03-08 12:32:49 +01:00
Ricardo Wurmus 745c687be3
gnu: r: Fix syntax for INSTALL_OPTS.
This is a follow-up to commit 4621acfd82.

* gnu/packages/statistics.scm (r)[arguments]: Ensure that
"--built-timestamp" appears on the same line as the other INSTALL_OPTS.
2017-03-08 12:32:49 +01:00
Ludovic Courtès 6c5b56f9fa
gnu: bash: Use the bootstrap Guile in 'url-fetch/reset-patch-level'.
Fixes <http://bugs.gnu.org/25775>.
Reported by Sirgazil, Ricardo Wurmus, Andy Wingo, and others.

* guix/download.scm (in-band-download): Always use GUILE.  This reverts
9f05908fb1.
* gnu/packages/bash.scm (url-fetch/reset-patch-level): Remove #:guile.
Pass %BOOTSTRAP-GUILE as #:guile to 'url-fetch'.  Remove #:guile-for-build
argument in 'gexp->derivation' call.
2017-03-07 23:58:08 +01:00
Thomas Danckaert faa65e2735
gnu: kdevelop: Upgrade to 5.0.4.
* gnu/packages/kde.scm (kdevelop, kdevplatform): Upgrade to 5.0.4.
(kdevplatform)[source]: Use kde mirror instead of github.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-07 23:21:59 +01:00
Marius Bakke 9bb766e70d
gnu: pcre2: Update to 10.23.
* gnu/packages/pcre.scm (pcre2): Update to 10.23.
[source]: Remove patch.
[arguments]: Add phase to substitute /bin/echo reference.
* gnu/packages/patches/pcre2-CVE-2016-3191.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-03-07 23:21:22 +01:00
Leo Famulari 3391e2a078
gnu: khal: Update to 0.9.3.
* gnu/packages/calendar.scm (khal): Update to 0.9.3.
[native-inputs]: Use python-pytest-2.9.2.
2017-03-07 16:37:21 -05:00
Leo Famulari f11275c9e5
gnu: gnupg: Update to 2.1.19.
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.19.
[arguments]: Add 'patch-test-paths' phase and remove 'set-gnupg-home' phase.
Add '--enable-gnupg-builddir-envvar' to #:configure-flags.
[source]: Add 'gnupg-2.1-fix-Y2038-test-failure.patch'.
* gnu/packages/patches/gnupg-2.1-fix-Y2038-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-03-07 16:37:17 -05:00
Ricardo Wurmus c1029f86e3
gnu: Add emacs-yasnippet.
* gnu/packages/emacs.scm (emacs-yasnippet): New variable.
2017-03-07 19:44:49 +01:00
Sergei Trofimovich 605fec783f
gnu: Add basic support for "alpha-linux" systems.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add
"/lib/ld-linux.so.2" as "alpha-linux" ld.so.
* gnu/packages/linux.scm (system->linux-architecture): Add "alpha" arch.

Signed-off-by: Sergei Trofimovich <slyfox@inbox.ru>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-07 18:20:33 +01:00
Pjotr Prins d6abd094fc
gnu: python-rpy2: Propagate python2-singledispatch.
* gnu/packages/python.scm (python-rp2)[native-inputs]: Rename to...
[propagated-inputs]: ... this.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-07 18:19:51 +01:00
Ricardo Wurmus 9296684713
gnu: java-xz: Update to 1.6.
* gnu/packages/java.scm (java-xz): Update to 1.6.
2017-03-07 17:27:30 +01:00
Maxim Cournoyer af12687522
gnu: guile-lib: Update to 0.2.5
The build was broken since the URL of version 0.2.3 was changed. The archive
was moved into an "old" subdirectory of the original location.

* gnu/packages/guile.scm (guile-lib): Update to 0.2.5.
[make-flags]: Add GUILE_AUTO_COMPILE to prevent guild errors.
[phases]: Remove 'check replacement since it is no longer needed.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-07 16:44:02 +01:00
Nicolas Goaziou eaa72e3a11
gnu: asymptote: Update to 2.40.
* gnu/packages/plotutils.scm (asymptote): Update to 2.40.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-03-07 20:02:04 +08:00
宋文武 c402743579
gnu: Add blind.
* gnu/packages/suckless.scm (blind): New package.
2017-03-07 19:41:23 +08:00
Mekeor Melire 45321beb7d
gnu: surf: Add 'dmenu' and 'xprop' to 'inputs'.
'dmenu' and 'xprop' are necessary to open a new URL in surf.

* gnu/packages/suckless.scm (surf)[inputs]: Add dmenu and xprop.
[arguments]: Add 'set-dmenu-and-xprop-file-name' phase to patch the
paths to the 'dmenu' and 'xprop' binaries in surf's configuration file.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-03-07 00:29:14 -05:00
David Craven 909de139e7
vm: Fix full-boot? option.
* gnu/system/vm.scm (virtualized-operating-system): Add full-boot?
  option. Don't add a %store-mapping when full-boot? is passed. This leads
  the grub-configuration-file procedure to look for the kernel and initrd in
  / instead of /gnu/store.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-06 23:54:48 +01:00
Ludovic Courtès ecc4324fef
system: grub: Add missing URL in comment.
* gnu/system/grub.scm (grub-root-search): Add missing URL in comment.
2017-03-06 23:54:48 +01:00
Thomas Danckaert ba062b3ec4
gnu: python-colorspacious: Run tests.
* gnu/packages/python.scm (python-colorspacious,
python2-colorspacious)[native-inputs]: Add python-nose.
[arguments]: Add custom 'check phase which runs nosetests.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-06 23:51:23 +01:00
Marius Bakke 46d6219d41
gnu: rofi: Fix test failure.
* gnu/packages/xdisorg.scm (rofi)[arguments]: Disable parallel tests.
2017-03-06 23:38:48 +01:00
Thomas Danckaert 5eefa50abd
gnu: Remove python-sphinx-1.2.3.
* gnu/packages/python.scm (python-sphinx-1.2.3, python2-sphinx-1.2.3): Remove variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-06 23:28:10 +01:00
Marius Bakke 6cb7477699
gnu: python-statsmodels: Update to 0.8.0.
* gnu/packages/statistics.scm (python-statsmodels, python2-statsmodels):
Update to 0.8.0.
[source]: Use 'pypi-uri'.
[arguments]: Add more files to matplotlib backend substitution.
* gnu/packages/patches/python-statsmodels-fix-tests.patch: Drop test that
fails with numpy 1.12. Remove previous contents.
2017-03-06 23:24:11 +01:00
Marius Bakke 8e08604814
gnu: python-pandas: Update to 0.19.2.
* gnu/packages/python.scm (python-pandas, python2-pandas): Update to 0.19.2.
[source]: Use 'pypi-uri'.
2017-03-06 23:24:03 +01:00
Thomas Danckaert 4535a93adb
gnu: python-matplotlib: Update to 2.0.0.
* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Update to
2.0.0.
[source]: Remove Tk backend patch, use Github instead of Sourceforge.
[outputs]: Remove "doc" output.
[inputs]: Add python-pyqt.
[propagated-inputs]: Add python-cycler.
[native-inputs]: Remove python-sphinx, python-numpydoc, texlive and texinfo.
(python2-matplotlib)[native-inputs]: Add python2-functools32 and
python2-subprocess32.
(python-matplotlib-documentation, python2-matplotlib-documentation): New
variables.
* gnu/packages/patches/matplotlib-setupext-tk.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-06 23:22:22 +01:00
Marius Bakke 550bd98b41
gnu: Add python2-subprocess32.
* gnu/packages/python.scm (python2-subprocess32): New variable.
* gnu/packages/patches/python2-subprocess32-disable-input-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-03-06 23:21:34 +01:00
Thomas Danckaert 7ccb71e0ea
gnu: python-numpy: Update to 1.12.0.
* gnu/packages/python.scm (python-numpy): Update to 1.12.0.
  [source]: Use github instead of sourceforge.
  [native-inputs]: Add python-cython.

  To simplify the handling of dependency cycles (numpy documentation depends
  on matplotlib, which depends on numpy), we split out the documentation into
  a separate package:
  (python-numpy-bootstrap, python2-numpy-bootstrap): Remove variables.
  (python-numpy-documentation, python2-numpy-documentation): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-06 23:21:06 +01:00
Leo Famulari 14807141e5
Revert "gnu: gnupg: Update to 2.1.19."
This reverts commit 07302d1ab4.

GnuPG 2.1.19 fails to build on armhf-linux and i686-linux:

<https://bugs.gnupg.org/gnupg/issue2988>
2017-03-06 17:11:19 -05:00