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37922 Commits

Author SHA1 Message Date
Ludovic Courtès bca6396749
doc: Mention that ./pre-inst-env is generated. 
Suggested by swedebugia <swedebugia@riseup.net>.

* doc/contributing.texi (Running Guix Before It Is Installed): Mention
that ./pre-inst-env is generated.
 2018-11-16 23:16:05 +01:00
Kyle Meyer 243bdcc12e
gnu: Add git-when-merged. 
* gnu/packages/version-control.scm (git-when-merged): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-16 23:11:40 +01:00
Thorsten Wilms 7a44e8752e
gnu: Add caps-plugins-lv2. 
* gnu/packages/audio.scm (caps-plugins-lv2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-16 23:09:00 +01:00
Ludovic Courtès 54ca1a375b
doc: Recommend pool.sks-keyservers.net. 
pgp.mit.edu appears to be unreliable these days.

* doc/guix.texi (KEY-SERVER): New variable.
(Binary Installation, USB Stick and DVD Installation): Use it in 'gpg
--recv-keys' example.
 2018-11-16 23:02:18 +01:00
David Thompson a7b7d48cc7
gnu: tiled: Update to 1.2.1. 
* gnu/packages/game-development.scm (tiled): Update to 1.2.1.
 2018-11-16 10:34:29 -05:00
Clément Lassieur d827fd31ca
progress: Do not display the last 0B transfer when size is unknown. 
* guix/progress.scm (display-download-progress): Don't display anything when
both SIZE and TRANSFERRED are null.
 2018-11-16 14:53:44 +01:00
Clément Lassieur 0289dc1473
progress: Fix crash because of division by zero. 
* guix/progress.scm (display-download-progress): Handle the case where SIZE is
null.
 2018-11-16 14:53:40 +01:00
Mathieu Othacehe 2aee2a96b6
guile: newt: Update revision to 2. 
* gnu/packages/guile.scm (guile-newt): Update revision to 2.
 2018-11-16 17:42:07 +09:00
Andreas Enge eea7cd7519
gnu: Add cmh. 
* gnu/packages/algebra.scm (cmh): New variable.
 2018-11-16 09:06:31 +01:00
Andreas Enge 44ff80fc0e
gnu: gp2c: Update to 0.0.11pl1. 
* gnu/packages/algebra.scm (gp2c): Update to 0.0.11pl1.
 2018-11-16 08:48:47 +01:00
Maxim Cournoyer 03592a6f88
gnu: emacs-realgud: Patch configure.ac to repair the build. 
This fixes https://bugs.gnu.org/33196, a build problem caused by a defective
Elisp snippet in a check in configure.ac.

* gnu/packages/patches/emacs-realgud-fix-configure-ac.patch: Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs.scm (emacs-realgud)[source]: Use it.
 2018-11-15 22:42:35 -05:00
pimi 30f0d21b40
gnu: Add nanopolish. 
* gnu/packages/bioinformatics.scm (nanopolish): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-11-15 22:23:57 +01:00
Giovanni Biscuolo c61f36f368
doc: Fix typo in connman config. 
* doc/guix.texi (Networking Services): Fix typo in connman config
"disable-vpn?" parameter documentation, semantic is inverted.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2018-11-15 20:11:36 +02:00
Roel Janssen 2d86eaff5b
gnu: sambamba: Update to 0.6.8. 
* gnu/packages/bioinformatics.scm (sambamba): Update to 0.6.8.
 2018-11-15 13:09:01 +01:00
Mark H Weaver 2e0f69057a
gnu: bioinformatics: Return #t from all phases and snippets. 
* gnu/packages/bioinformatics.scm (bamtools, ribotaper, bioawk)
(codingquarry, fraggenescan, minced, pplacer, star, subread, sailfish)
(salmon): Return #t from all phases and snippets, use 'invoke' where
appropriate, and remove vestigal plumbing.
 2018-11-14 23:44:18 -05:00
Mark H Weaver 96272e2822
gnu: databases: Return #t from all phases. 
* gnu/packages/databases.scm (4store, go-gopkg.in-mgo.v2, mongodb)
(sparql-query, tdb, sqlcipher, python-sqlparse, mongo-tools): Return #t from
all phases, use invoke where appropriate, and remove vestigial plumbing.
 2018-11-14 23:44:16 -05:00
Mark H Weaver 9f6f726c7f
gnu: compression: Return #t from all phases. 
* gnu/packages/compression.scm (perl-compress-raw-zlib, java-snappy)
(java-iq80-snappy, pzstd, java-tukaani-xz): Return #t from all phases.
 2018-11-14 23:44:14 -05:00
Mark H Weaver 29594404a1
gnu: check: Return #t from all phases. 
* gnu/packages/check.scm (cmdtest, python-pytest-cov, python-fixtures)
(python-pytest-localserver, python-pytest-flakes)
(python2-coverage-test-runner, python-pylint, python-behave-web-api):
Return #t from all phases, and use invoke where appropriate.
 2018-11-14 23:44:12 -05:00
Mark H Weaver ee527187a6
gnu: audio: Return #t from all phases. 
* gnu/packages/audio.scm (clalsadrv, jack-2, libsbsms, zita-convolver)
(zita-resampler, zita-alsa-pcmi, gsm, cava): Return #t from all phases.
(ladspa): Use 'modify-phases'.  Return #t from all phases.
 2018-11-14 23:44:10 -05:00
Mark H Weaver c6bf07d14a
gnu: xorg: Return #t from all phases. 
* gnu/packages/xorg.scm (xcompmgr)
* gnu/packages/xdisorg.scm (xdotool, scrot, unclutter, xscreensaver)
(tint2, nxbelld, xautolock): Return #t from all phases.
 2018-11-14 23:44:08 -05:00
Mark H Weaver aa6f87a2b9
gnu: xml: Return #t from all phases. 
* gnu/packages/xml.scm (python-libxml2, perl-xml-sax, xlsx2csv, libxls)
(java-kxml2): Return #t from all phases.
 2018-11-14 23:44:06 -05:00
Mark H Weaver 9dcfd6aac9
gnu: video: Return #t from all phases. 
* gnu/packages/video.scm (youtube-dl-gui, avidemux, xvid, twitchy, aegisub):
Return #t from all phases, use invoke where appropriate, and remove vestigial
plumbing.
 2018-11-14 23:44:04 -05:00
Mark H Weaver 4851af9ebe
gnu: perl: Return #t from all phases. 
* gnu/packages/gd.scm (perl-gd-securityimage)
* gnu/packages/libevent.scm (perl-ev)
* gnu/packages/markup.scm (perl-text-markdown-discount)
* gnu/packages/perl-check.scm (perl-test2-bundle-extended)
* gnu/packages/perl.scm (perl-digest-md5, perl-encode-hanextra)
(perl-ipc-run, perl-pathtools)
* gnu/packages/photo.scm (perl-image-exiftool): Return #t from all phases.
 2018-11-14 23:44:02 -05:00
Mark H Weaver 366c1cbbc6
gnu: networking: Return #t from all phases. 
* gnu/packages/networking.scm (miredo, tcp-wrappers, librdkafka, ifstatus)
(iodine, httpstat, perl-socket6, perl-netaddr-ip, libproxy, openvswitch)
(libnet, asio): Return #t from all phases.
 2018-11-14 23:43:59 -05:00
Mark H Weaver 9922278b25
gnu: linux: Return #t from all phases. 
* gnu/packages/linux.scm (iproute, ntfs-3g, cpupower, radeontop, tlp):
Return #t from all phases.
 2018-11-14 23:43:57 -05:00
Mark H Weaver fccacffbf4
gnu: image: Return #t from all phases. 
* gnu/packages/image.scm (libpng-apng, pngcrush, leptonica, zimg)
(perceptualdiff): Return #t from all phases.
 2018-11-14 23:43:54 -05:00
Mark H Weaver cb8ba848d2
gnu: admin: Return #t from all phases. 
* gnu/packages/admin.scm (daemon-tools, rottlog, wpa-supplicant-minimal)
(wakelan, cpulimit, nmap, sunxi-tools): Return #t from all phases.
 2018-11-14 23:43:48 -05:00
Mark H Weaver 7413c31693
gnu: linux-libre: Update to 4.19.2. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.19.2.
(%linux-libre-hash): Update hash.
 2018-11-14 19:16:24 -05:00
Mark H Weaver 24ba798731
gnu: linux-libre@4.14: Update to 4.14.81. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.81.
(%linux-libre-4.14-hash): Update hash.
 2018-11-14 19:14:39 -05:00
Mark H Weaver 6a1cff70bc
gnu: linux-libre@4.9: Update to 4.9.137. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.137.
 2018-11-14 19:13:46 -05:00
Ludovic Courtès 21f7d88e7a
gnu: texlive-bin: Fix substitution regexp. 
This is a followup to commit be200ef316.

* gnu/packages/tex.scm (texlive-bin)[arguments]: In
'disable-failing-test' phase, escape "|" characters.
 2018-11-14 23:49:19 +01:00
Paul Garlick ae0f1dd1a4
gnu: Add fenics. 
* gnu/packages/simulation.scm (fenics): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:09 +01:00
Paul Garlick 0ace6c0b84
gnu: Add fenics-dolfin. 
* gnu/packages/simulation.scm (fenics-dolfin): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:09 +01:00
Paul Garlick 6b7f1f8afa
gnu: Add python-fenics-ffc. 
* gnu/packages/simulation.scm (python-fenics-ffc): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:09 +01:00
Paul Garlick 0fc499834f
gnu: Add python-fenics-fiat. 
* gnu/packages/simulation.scm (python-fenics-fiat): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:08 +01:00
Paul Garlick 3941cf5afa
gnu: Add python-fenics-ufl. 
* gnu/packages/simulation.scm (python-fenics-ufl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:08 +01:00
Paul Garlick f7a4757a4c
gnu: Add python-fenics-dijitso. 
* gnu/packages/simulation.scm (python-fenics-dijitso): New varaible.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:08 +01:00
Paul Garlick 6b5687d053
gnu: Add python-slepc4py. 
* gnu/packages/maths.scm (python-slepc4py): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:08 +01:00
Paul Garlick 90ff287401
gnu: Add python-petsc4py. 
* gnu/packages/maths.scm (python-petsc4py): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:08 +01:00
Paul Garlick 54fcd547b3
gnu: Add python-mpi4py. 
* gnu/packages/mpi.scm (python-mpi4py): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-11-14 21:34:08 +01:00
Ludovic Courtès 0fe1fba4af
daemon: Install 'authenticate' script under LIBEXECDIR/guix. 
That way it is handled in the same way as other helper scripts.

* nix/scripts/guix-authenticate.in: Rename to...
* nix/scripts/authenticate.in: ... this.
* config-daemon.ac: Adjust accordingly.
* nix/local.mk (libstore_a_CPPFLAGS): Remove -DOPENSSL_PATH.
(nodist_libexec_SCRIPTS): Remove.
(nodist_pkglibexec_SCRIPTS): New variable.
* nix/nix-daemon/guix-daemon.cc (main): Remove 'setenv' call for
"PATH".
* nix/libstore/local-store.cc (runAuthenticationProgram): New function.
(LocalStore::exportPath, LocalStore::importPath): Use it instead of
'runProgram' and OPENSSL_PATH.
 2018-11-14 21:34:08 +01:00
Ludovic Courtès 7a54b2281d
gnu: guix-daemon: Install 'guix-authenticate'. 
Fixes <https://bugs.gnu.org/33368>.
Reported by Konrad Hinsen <konrad.hinsen@fastmail.net>.

* gnu/packages/package-management.scm (guix-daemon)[arguments]: In
'install' phase, build "install-nodist_libexecSCRIPTS" target to install
'guix-authenticate'.
 2018-11-14 21:34:08 +01:00
Ludovic Courtès 89f1fee8e7
download: Access content-addressed mirrors over HTTPS. 
Bug <http://bugs.gnu.org/22774> is no longer relevant now that we use
"builtin:download" exclusively.

* guix/download.scm (%content-addressed-mirrors): Use "https", not
"http".
 2018-11-14 21:34:08 +01:00
Ludovic Courtès ee2cfdfe86
download: Add Software Heritage as a content-addressed mirror. 
* guix/download.scm (%content-addressed-mirrors): Add Software
Heritage.
 2018-11-14 21:34:07 +01:00
Marius Bakke 79ee97a144
Merge branch 'master' into core-updates 2018-11-14 21:20:46 +01:00
Marius Bakke 7d9d521fbc
gnu: aide: Provide libpcre.a and libz.a. 
* gnu/packages/admin.scm (aide)[inputs]: Add PCRE:STATIC and ZLIB:STATIC.
 2018-11-14 21:07:01 +01:00
Marius Bakke e921993c25
gnu: xf86-video-r128: Update to 6.12.0. 
* gnu/packages/xorg.scm (xf86-video-r128): Update to 6.12.0.
 2018-11-14 21:05:30 +01:00
Marius Bakke 24dd6ec38a
gnu: mtools: Update to 4.0.20. 
* gnu/packages/mtools.scm (mtools): Update to 4.0.20.
[source](uri): Change to 'bz2' compressed tarball.
 2018-11-14 21:05:30 +01:00
Marius Bakke 7939387da8
gnu: nano: Update to 3.2. 
* gnu/packages/nano.scm (nano): Update to 3.2.
 2018-11-14 21:05:30 +01:00
Marius Bakke d63f588486
gnu: sudo: Update to 1.8.26. 
* gnu/packages/admin.scm (sudo): Update to 1.8.26.
 2018-11-14 21:05:30 +01:00