Tobias Geerinckx-Rice
2f3800e53e
gnu: ruby: Use HTTPS for home pages.
...
* gnu/packages/ruby.scm (ruby-hoe, bundler, ruby-rjb, ruby-libxml)
(ruby-permutation, ruby-gettext, ruby-test-unit, ruby-pry, ruby-tzinfo)
(ruby-tzinfo-data, ruby-term-ansicolor, ruby-pstree, ruby-json, ruby-rack)
(ruby-yard, ruby-ansi, ruby-rubytest, ruby-brass, ruby-qed, ruby-ae)
(ruby-lemon, ruby-rubytest-cli, ruby-hashery)[home-page]: Use HTTPS.
2017-12-23 05:49:47 +01:00
Tobias Geerinckx-Rice
925131916d
gnu: ruby-tzinfo-data: Update to 1.2017.3.
...
* gnu/packages/ruby.scm (ruby-tzinfo-data): Update to 1.2017.3
2017-12-23 05:25:41 +01:00
Tobias Geerinckx-Rice
4237af8529
gnu: ruby-tzinfo: Update to 1.2.4.
...
* gnu/packages/ruby.scm (ruby-tzinfo): Update to 1.2.4
2017-12-23 05:25:32 +01:00
Tobias Geerinckx-Rice
484d68f27c
gnu: ocaml-utop: Update to 2.0.2.
...
* gnu/packages/ocaml.scm (ocaml-utop): Update to 2.0.2
2017-12-23 05:09:11 +01:00
Tobias Geerinckx-Rice
0e43721f32
gnu: ocaml-jbuilder: Update to 1.0+beta16.
...
* gnu/packages/ocaml.scm (ocaml-jbuilder): Update to 1.0+beta16
2017-12-23 05:09:11 +01:00
Tobias Geerinckx-Rice
36dba63b83
gnu: ocaml-ssl: Expand description.
...
* gnu/packages/ocaml.scm (ocaml-ssl)[description]: Expand based on Debian's.
2017-12-23 05:09:10 +01:00
Tobias Geerinckx-Rice
26b438e064
gnu: ocaml-ssl: Update to 0.5.5.
...
* gnu/packages/ocaml.scm (ocaml-ssl): Update to 0.5.5
2017-12-23 05:09:10 +01:00
Tobias Geerinckx-Rice
7b20cd575e
gnu: ocaml-bitstring: Update to 2.1.1.
...
* gnu/packages/ocaml.scm (ocaml-bitstring): Update to 2.1.1
2017-12-23 05:09:09 +01:00
Tobias Geerinckx-Rice
50786325cd
gnu: fish: Mark up description.
...
* gnu/packages/shells.scm (fish)[description]: Use @command{}.
2017-12-23 05:09:09 +01:00
Tobias Geerinckx-Rice
66e86f2681
gnu: protobuf: Update to 3.5.1.
...
* gnu/packages/protobuf.scm (protobuf): Update to 3.5.1.
2017-12-23 04:48:17 +01:00
Kei Kebreau
84958de120
gnu: windowmaker: Enable xinerama support.
...
* gnu/packages/gnustep.scm (windowmaker)[inputs]: Add libxinerama.
2017-12-22 18:48:23 -05:00
Mason Hock
85f075a057
gnu: lilypond: Update to 2.19.80.
...
* gnu/packages/music.scm (lilypond): Update to 2.19.80.
2017-12-22 22:16:53 +01:00
Christopher Baines
3faa422d5f
gnu: Build wiredtiger with snappy support.
...
This is probably necessary to get the MongoDB package in Guix to successfully
use the Guix wiredtiger package, as MongoDB it uses wiredtiger with snappy by
default.
* gnu/packages/databases.scm (wiredtiger)[arguments]: Add --enable-snappy to
#:configure-flags.
[inputs]: Add snappy.
2017-12-22 19:23:53 +00:00
Tobias Geerinckx-Rice
58087bdddc
gnu: fish: Update to 2.7.1.
...
* gnu/packages/shells.scm (fish): Update to 2.7.1.
2017-12-22 19:48:44 +01:00
Kei Kebreau
9e3a8ed0eb
gnu: python-pillow: Update to 4.3.0.
...
* gnu/packages/python.scm (python-pillow): Update to 4.3.0.
[propagated-inputs]: Add python-olefile.
* gnu/packages/patches/python-pillow-freetype-2.7-test-failure.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2017-12-22 11:49:43 -05:00
Kei Kebreau
3a1f26ff75
gnu: Add python-olefile.
...
* gnu/packages/python.scm (python-olefile, python2-olefile): New variables.
2017-12-22 11:49:28 -05:00
Leo Famulari
0054564b85
gnu: mariadb: Update to 10.1.29.
...
* gnu/packages/databases.scm (mariadb): Update to 10.1.29.
2017-12-22 10:53:50 -05:00
Mathieu Othacehe
2cf5f4c144
file-systems: Move %control-groups from %base-file-systems to
...
%elogind-file-systems.
* gnu/system/file-systems.scm (%base-file-systems): Move %control-groups from
here, to ...
(%elogind-file-systems): ... here.
2017-12-22 15:03:10 +01:00
Mathieu Othacehe
c729225b0f
file-systems: Do not mount hugetlb cgroup filesystem.
...
On ARM32 without LPAE support, hugetlb control group is not supported.
As it is not needed by elogind, remove it for all platforms.
* gnu/system/file-systems.scm (%control-groups): Remove hugetlb from control
groups platforms.
2017-12-22 15:03:10 +01:00
Roel Janssen
b9bf2b8985
gnu: Update r-mutationalpatterns to 1.4.2.
...
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.4.2.
2017-12-22 12:23:06 +01:00
Rutger Helling
d633f2f62a
gnu: mutter: Add xorg-xserver-xwayland input.
...
* gnu/packages/gnome.scm (mutter)[inputs]: Add xorg-server-xwayland.
[arguments]: Add '--with-xwayland-path' to #:configure-flags.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-22 09:55:01 +01:00
Ludovic Courtès
42ff7d3be6
mapped-devices: 'luks-device-mapping' checks its source device.
...
* gnu/system/mapped-devices.scm (check-luks-device): New procedure.
(luks-device-mapping)[check]: New field.
2017-12-22 09:48:38 +01:00
Ludovic Courtès
4ca90ff597
mapped-devices: Add 'location' and 'check' fields.
...
* gnu/system/mapped-devices.scm (<mapped-device>)[location]: New field.
(<mapped-device-type>)[check]: New field.
2017-12-22 09:48:36 +01:00
Konrad Hinsen
de2032b912
gnu: Add python-activepapers.
...
* gnu/packages/python.scm (python-activepapers, python2-activepapers):
New variables.
Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2017-12-22 09:46:13 +01:00
Ludovic Courtès
4a32f58aa1
services: urandom-seed: Depend on udev.
...
Suggested by Leo Famulari <leo@famulari.name>.
* gnu/services/base.scm (urandom-seed-shepherd-service): Add 'udev' to
'requirement'.
2017-12-22 08:56:50 +01:00
Ludovic Courtès
8faaf8d7cc
services: urandom-seed: Deprecate the 'urandom-seed-service' procedure.
...
* gnu/services/base.scm (urandom-seed-service-type)[default-value]: New
field.
(urandom-seed-service): Mark as deprecated.
(%base-services): Use URANDOM-SEED-SERVICE-TYPE directly.
* gnu/services/base.scm (%base-services):
* doc/guix.texi (Base Services): Document 'urandom-seed-service-type'
instead of 'urandom-seed-service'.
2017-12-22 08:56:50 +01:00
Ludovic Courtès
4e9fd50857
services: urandom-seed: Become a dependency of 'user-processes'.
...
This ensures that 'urandom-seed' is started before programs that rely on
sources of randomness.
Fixes <https://bugs.gnu.org/29773 >.
Reported by Leo Famulari <leo@famulari.name>.
* gnu/services/base.scm (urandom-seed-shepherd-service): Change
'requirement' to (file-systems).
(urandom-seed-service-type): Extend USER-PROCESSES-SERVICE-TYPE.
2017-12-22 08:56:50 +01:00
Ludovic Courtès
206a28d84a
services: 'user-processes-service-type' can now be extended.
...
* gnu/services/base.scm (user-processes-shepherd-service): New
procedure, taken from former 'user-processes-service-type'. Add
REQUIREMENTS argument; remove GRACE-DELAY argument.
(user-processes-service-type): Redefine in terms of 'service-type'.
(user-processes-service): Remove.
(file-system-service-type): Extend USER-PROCESSES-SERVICE-TYPE.
* gnu/system.scm (essential-services): Use USER-PROCESSES-SERVICE-TYPE
directly.
2017-12-22 08:56:50 +01:00
Mathieu Othacehe
a468f89743
system: examples: Add missing initrd to beaglebone-black.tmpl.
...
* gnu/system/examples/beaglebone-black.tmpl (operating-system): Add the
initrd with "omap_hsmmc" as an extra-module.
2017-12-22 08:49:57 +01:00
Ricardo Wurmus
5145001a15
gnu: Add meandmyshadow.
...
* gnu/packages/games.scm (meandmyshadow): New variable.
2017-12-22 07:56:55 +01:00
Ricardo Wurmus
5f66a0a78b
gnu: emacs-ivy: Install documentation.
...
* gnu/packages/emacs.scm (emacs-ivy)[arguments]: Add phase "install-doc".
[native-inputs]: Add texinfo.
2017-12-22 07:56:55 +01:00
Ricardo Wurmus
a837423412
gnu: emacs-ivy: Update to 0.10.0.
...
* gnu/packages/emacs.scm (emacs-ivy): Update to 0.10.0.
2017-12-22 07:56:54 +01:00
Tobias Geerinckx-Rice
8c4ca853e0
gnu: Add plzip.
...
* gnu/packages/compression.scm (plzip): New public variable.
2017-12-22 01:06:03 +01:00
Tobias Geerinckx-Rice
2e3b1a92f4
gnu: Add lzlib.
...
* gnu/packages/compression.scm (lzlib): New public variable.
2017-12-22 01:06:02 +01:00
Tobias Geerinckx-Rice
5dca4c76ac
gnu: Add clzip.
...
* gnu/packages/compression.scm (clzip): New public variable.
2017-12-22 01:06:02 +01:00
Tobias Geerinckx-Rice
34e8cf225c
gnu: Add lunzip.
...
* gnu/packages/compression.scm (lunzip): New public variable.
2017-12-22 01:06:02 +01:00
Tobias Geerinckx-Rice
82d57f126c
gnu: Add hungrycat.
...
* gnu/packages/admin.scm (hungrycat): New public variable.
2017-12-22 01:06:01 +01:00
Tobias Geerinckx-Rice
e807306324
gnu: zstd: Use default ‘check’ target.
...
* gnu/packages/compression.scm (zstd)[arguments]: Don't set #:test-target.
2017-12-22 01:06:01 +01:00
Leo Famulari
9c3ad422d0
gnu: libgxps: Fix CVE-2017-11590.
...
* gnu/packages/patches/libgxps-CVE-2017-11590.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (libgxps)[source]: Use it.
2017-12-21 14:17:35 -05:00
Leo Famulari
5dc0e0b055
gnu: imagemagick: Update to 6.9.9-27.
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-27.
2017-12-21 13:23:02 -05:00
Leo Famulari
382e5f1947
gnu: gnupg: Update to 2.2.4.
...
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.4.
2017-12-21 12:59:56 -05:00
Tobias Geerinckx-Rice
00840ee004
gnu: weechat: Run tests.
...
* gnu/packages/irc.scm (weechat)[native-inputs]: Add cpputest.
[arguments]: Add ‘-DENABLE_TESTS=ON’ to #:configure-flags. Add
‘disable-failing-tests’ phase to do just that. Run the others.
2017-12-21 18:43:01 +01:00
Tobias Geerinckx-Rice
f45e314e19
gnu: zstd: Disable unrelated format support.
...
* gnu/packages/compression.scm (zstd)[arguments]: Add HAVE_LZMA=0 to
2017-12-21 18:43:01 +01:00
Tobias Geerinckx-Rice
5308f15b43
gnu: zstd: Update to 1.3.3.
...
* gnu/packages/compression.scm (zstd): Update to 1.3.3.
2017-12-21 18:43:01 +01:00
Leo Famulari
806e891e85
gnu: gnupg@2.0: Superseded by the latest GnuPG.
...
The 2.0 series of GnuPG will stop receiving upstream support on
2017-12-31. From the release announcement of GnuPG 2.2.0:
"This release marks the start of a new long term support series
to replace the 2.0.x series which will reach end-of-life on 2017-12-31."
https://lists.gnupg.org/pipermail/gnupg-announce/2017q3/000413.html
* gnu/packages/gnupg.scm (gnupg-2.0)[properties]: New field.
2017-12-21 12:37:25 -05:00
Leo Famulari
0c9c9526bb
gnu: libxslt: Fix CVE-2017-5029 and re-apply the fix for CVE-2016-4738.
...
This is a followup to commit 2663c38826
.
* gnu/packages/xml.scm (libxslt)[replacement]: New field.
(libxslt/fixed): New variable.
* gnu/packages/patches/libxslt-CVE-2017-5029.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-12-21 12:28:47 -05:00
Leo Famulari
2a0e3d1635
gnu: libarchive: Fix CVE-2017-14502.
...
* gnu/packages/patches/libarchive-CVE-2017-14502.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/backup.scm (libarchive-3.3.2)[source]: Use it.
2017-12-21 12:28:43 -05:00
Konrad Hinsen
c521c8f1a4
gnu: Add python-tempdir.
...
* gnu/packages/python.scm (python-tempdir, python2-tempdir): New
variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-21 10:44:39 +01:00
Leo Famulari
ce16d312c6
gnu: libexif: Fix CVE-2017-7544.
...
* gnu/packages/patches/libexif-CVE-2017-7544.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/photo.scm (feh)[source]: Use it.
2017-12-21 03:24:55 -05:00
Efraim Flashner
417f3d494f
gnu: xboing: Fix CVE-2004-0149.
...
* gnu/packages/patches/xboing-CVE-2004-0149: New file.
* gnu/packages/games.scm (xboing)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-12-21 09:04:34 +02:00
Leo Famulari
dab2542f84
gnu: mupdf: Update to 1.12.0 [fixes CVE-2017-15369].
...
* gnu/packages/pdf.scm (mupdf): Update to 1.12.0.
[source]: Remove obsolete patches.
[inputs]: Add freeglut.
* gnu/packages/patches/mupdf-CVE-2017-14685.patch,
gnu/packages/patches/mupdf-CVE-2017-14686.patch,
gnu/packages/patches/mupdf-CVE-2017-14687.patch,
gnu/packages/patches/mupdf-CVE-2017-15587.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Update and
rename to...
* gnu/packages/patches/mupdf-build-with-latest-openjpeg.patch: ... new file.
2017-12-21 02:00:59 -05:00
Tobias Geerinckx-Rice
91213c384b
gnu: weechat: Update to 2.0.1.
...
* gnu/packages/irc.scm (weechat): Update to 2.0.1.
2017-12-21 03:20:11 +01:00
Tobias Geerinckx-Rice
fa79a908bb
gnu: Add perl-test-requiresinternet.
...
* gnu/packages/perl-check.scm (perl-test-requiresinternet): New public
variable.
2017-12-21 03:20:11 +01:00
Leo Famulari
dacd8cf2e8
gnu: links: Fix-CVE-2017-11114.
...
* gnu/packages/patches/links-CVE-2017-11114.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/web-browsers.scm (links)[source]: Use it.
2017-12-20 20:08:35 -05:00
Mark H Weaver
66df43b9ae
gnu: linux-libre: Update to 4.14.8.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.8.
(%linux-libre-hash): Update hash.
2017-12-20 18:28:36 -05:00
Mark H Weaver
0786e4bd12
gnu: linux-libre@4.9: Update to 4.9.71.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.71.
2017-12-20 18:27:48 -05:00
Mark H Weaver
770635e11d
gnu: linux-libre@4.4: Update to 4.4.107.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.107.
2017-12-20 18:27:08 -05:00
Ricardo Wurmus
4305176096
gnu: microscheme: Fix home page.
...
* gnu/packages/avr.scm (microscheme)[home-page]: Use GitHub project page.
Fixes <https://bugs.gnu.org/29791 >.
2017-12-20 23:18:24 +01:00
Leo Famulari
0e06bec250
gnu: gpgme: Build with the latest GnuPG.
...
* gnu/packages/gnupg.scm (gpgme)[inputs]: Use the latest gnupg package.
[arguments]: Keep a reference to the gnupg package used for build.
2017-12-20 16:41:41 -05:00
Leo Famulari
e6f63412c9
gnu: python-pygpgme: Use GnuPG 1 for the test suite.
...
* gnu/packages/gnupg.scm (python-pygpgme, python2-pygpgme)[inputs]: Use gnupg-1
and make it a native-input.
2017-12-20 15:13:22 -05:00
Leo Famulari
5965b08307
gnu: libassuan: Update to 2.5.1.
...
* gnu/packages/gnupg.scm (libassuan): Update to 2.5.1.
2017-12-20 15:11:27 -05:00
Tobias Geerinckx-Rice
48a9654ad6
gnu: exim: Update to 4.90.
...
* gnu/packages/mail.scm (exim): Update to 4.90.
2017-12-20 16:50:28 +01:00
Leo Famulari
8bc6956bbd
gnu: rng-tools: Update to 6.1.
...
Rng-tools development appears to have moved to GitHub [0]:
"NOTE: The rng-tools project hasn't seen updates in some time, but is
still in active use. To facilitate ongoing development, the rng-tools
project is moved to here:
https://github.com/nhorman/rng-tools "
[0]
https://sourceforge.net/p/gkernel/wiki/Home/
* gnu/packages/linux.scm (rng-tools): Update to 6.1.
[source]: Use new upstream URL and give a descriptive file-name.
[arguments]: Add a 'bootstrap' phase.
[native-inputs]: Add autoconf, automake, and pkg-config.
[inputs]: Add sysfsutils.
2017-12-20 03:53:52 -05:00
Rutger Helling
09a91adcf8
gnu: libressl: Update to 2.6.4.
...
* gnu/packages/tls.scm (libressl): Update to 2.6.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-12-20 02:56:55 -05:00
Leo Famulari
afcbc348a3
gnu: babl: Update to 0.1.38.
...
* gnu/packages/gimp.scm (babl): Update to 0.1.38.
2017-12-20 01:40:14 -05:00
Leo Famulari
74c96b0b09
gnu: webkitgtk: Update to 2.18.4 [fixes CVE-2017-{7156,13856,13866,13870}].
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.4.
2017-12-19 14:52:15 -05:00
Ricardo Wurmus
57ae890fb3
gnu: r-htmltable: Update to 1.11.0.
...
* gnu/packages/web.scm (r-htmltable): Update to 1.11.0.
[propagated-inputs]: Add r-dplyr, r-htmltools, r-rstudioapi, and r-tidyr.
2017-12-19 20:35:08 +01:00
Ricardo Wurmus
aead9e1bc5
gnu: r-testthat: Update to 2.0.0.
...
* gnu/packages/statistics.scm (r-testthat): Update to 2.0.0.
[propagated-inputs]: Add r-cli, r-rlang, and r-withr.
2017-12-19 20:35:08 +01:00
Ricardo Wurmus
2976f304e2
gnu: Add r-cli.
...
* gnu/packages/cran.scm (r-cli): New variable.
2017-12-19 20:35:08 +01:00
Ricardo Wurmus
d03949449a
gnu: r-hardyweinberg: Update to 1.5.9.
...
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.5.9.
[propagated-inputs]: Add r-rsolnp.
2017-12-19 20:35:08 +01:00
Ricardo Wurmus
cb8b4c1196
gnu: Add r-rsolnp.
...
* gnu/packages/cran.scm (r-rsolnp): New variable.
2017-12-19 20:35:07 +01:00
Ricardo Wurmus
02cdb45f34
gnu: Add r-truncnorm.
...
* gnu/packages/cran.scm (r-truncnorm): New variable.
2017-12-19 20:35:07 +01:00
Ricardo Wurmus
5378f38332
gnu: r-curl: Update to 3.1.
...
* gnu/packages/web.scm (r-curl): Update to 3.1.
2017-12-19 20:35:07 +01:00
Ricardo Wurmus
f9f1291bc0
gnu: r-ade4: Update to 1.7-10.
...
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-10.
[propagated-inputs]: Add r-mass.
2017-12-19 20:35:07 +01:00
Ricardo Wurmus
83b0e1d53f
gnu: r-registry: Update to 0.5.
...
* gnu/packages/statistics.scm (r-registry): Update to 0.5.
2017-12-19 20:35:07 +01:00
Ricardo Wurmus
d2dc69b8be
gnu: r-iterators: Update to 1.0.9.
...
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.9.
2017-12-19 20:35:07 +01:00
Ricardo Wurmus
4a1945da16
gnu: r-segmented: Update to 0.5-3.0.
...
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-3.0.
2017-12-19 20:35:06 +01:00
Ricardo Wurmus
0a1b447e2b
gnu: r-rprojroot: Update to 1.3-1.
...
* gnu/packages/statistics.scm (r-rprojroot): Update to 1.3-1.
2017-12-19 20:35:06 +01:00
Ricardo Wurmus
102a271870
gnu: r-rcpparmadillo: Update to 0.8.300.1.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.8.300.1.0.
2017-12-19 20:35:06 +01:00
Ricardo Wurmus
0300cacae1
gnu: r-plotrix: Update to 3.7.
...
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7.
2017-12-19 20:35:06 +01:00
Ricardo Wurmus
004e108aad
gnu: r-git2r: Update to 0.20.0.
...
* gnu/packages/statistics.scm (r-git2r): Update to 0.20.0.
2017-12-19 20:35:06 +01:00
Ricardo Wurmus
069e3b5c09
gnu: r-backports: Update to 1.1.2.
...
* gnu/packages/statistics.scm (r-backports): Update to 1.1.2.
2017-12-19 20:35:05 +01:00
Ricardo Wurmus
1028f9ef11
gnu: r-yaml: Update to 2.1.16.
...
* gnu/packages/statistics.scm (r-yaml): Update to 2.1.16.
2017-12-19 20:35:05 +01:00
Ricardo Wurmus
de3fd9253f
gnu: r-reshape2: Update to 1.4.3.
...
* gnu/packages/statistics.scm (r-reshape2): Update to 1.4.3.
2017-12-19 20:35:05 +01:00
Ricardo Wurmus
d0c1a402db
gnu: r-digest: Update to 0.6.13.
...
* gnu/packages/statistics.scm (r-digest): Update to 0.6.13.
2017-12-19 20:35:05 +01:00
Ricardo Wurmus
2960f9658f
gnu: r-vcd: Update to 1.4-4.
...
* gnu/packages/cran.scm (r-vcd): Update to 1.4-4.
2017-12-19 20:35:05 +01:00
Ricardo Wurmus
f46a74e9f0
gnu: r-proxy: Update to 0.4-20.
...
* gnu/packages/cran.scm (r-proxy): Update to 0.4-20.
2017-12-19 20:35:04 +01:00
Ricardo Wurmus
b9e8a5c594
gnu: r-biomart: Update to 2.34.1.
...
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.34.1.
[propagated-inputs]: Add r-httr.
2017-12-19 20:35:04 +01:00
Ricardo Wurmus
11e42209a8
gnu: r-gviz: Update to 1.22.2.
...
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.22.2.
2017-12-19 20:35:04 +01:00
Ricardo Wurmus
2ccd850192
gnu: r-gqtlstats: Update to 1.10.1.
...
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.10.1.
2017-12-19 20:35:04 +01:00
Ricardo Wurmus
28d25d037e
gnu: r-rtracklayer: Update to 1.38.2.
...
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.2.
2017-12-19 20:35:04 +01:00
Ricardo Wurmus
d41f678420
gnu: r-limma: Update to 3.34.4.
...
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.34.4.
2017-12-19 20:35:03 +01:00
Ricardo Wurmus
ab0dd8ac10
gnu: r-edger: Update to 3.20.2.
...
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.2.
2017-12-19 20:35:03 +01:00
Ricardo Wurmus
7665fb39f5
gnu: r-biocstyle: Update to 2.6.1.
...
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.6.1.
2017-12-19 20:35:03 +01:00
Ricardo Wurmus
756ac7254c
gnu: r-dexseq: Update to 1.24.2.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.2.
2017-12-19 20:35:03 +01:00
Ricardo Wurmus
8d11ef4470
gnu: r-vegan: Update to 2.4-5.
...
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-5.
2017-12-19 20:35:02 +01:00
Danny Milosavljevic
68f1869cfc
gnu: xfce4-session: Disable (duplicate) Gtk+ icon cache generation.
...
* gnu/packages/xfce.scm (xfce4-session)[arguments]: Add make-flags to disable
Gtk+ icon cache generation.
2017-12-19 18:11:56 +01:00
Leo Famulari
9a56cf2b5b
services: urandom-seed: Try using a HWRNG to seed the Linux CRNG at boot.
...
* gnu/services/base.scm (urandom-seed-shepherd-service): Try to read from
'/dev/hwrng' at boot, as a supplement to any saved random seed.
* doc/guix.texi (Base Services): Document the new feature.
2017-12-19 11:31:24 -05:00
Kei Kebreau
a8db968fa4
gnu: wxmaxima: Update to 17.10.1.
...
* gnu/packages/maths.scm (wxmaxima): Update to 17.10.1.
2017-12-19 11:26:16 -05:00
nee
7a070f020b
gnu: Add quakespasm.
...
* gnu/packages/games.scm (quakespasm): New variable.
Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2017-12-19 10:21:14 -05:00
Ricardo Wurmus
0464dc1c1e
gnu: gajim: Update to 0.16.9.
...
* gnu/packages/messaging.scm (gajim): Update to 0.16.9.
2017-12-19 13:17:17 +01:00
Ricardo Wurmus
f3b985fa61
gnu: python-nbxmpp: Update to 0.6.1.
...
* gnu/packages/messaging.scm (python-nbxmpp): Update to 0.6.1.
2017-12-19 13:17:16 +01:00
Ricardo Wurmus
21bc352664
gnu: dino: Update to 0.0-3.f25fadde2.
...
* gnu/packages/messaging.scm (dino): Update to 0.0-3.f25fadde2.
2017-12-19 13:16:53 +01:00
Ricardo Wurmus
79b43bc3a1
gnu: pcsc-lite: Update to 1.8.23.
...
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.23.
[arguments]: Disable libsystemd check.
2017-12-19 13:16:42 +01:00
Ricardo Wurmus
b28e05d45e
gnu: antiword: Fix broken embedded directory name.
...
* gnu/packages/textutils.scm (antiword)[arguments]: Replace "configure" phase
to substitute reference to "/usr/share/antiword" with the actual directory in
the store.
2017-12-19 13:16:36 +01:00
Roel Janssen
fb6ca493f1
gnu: Update gwl to 0.1.1.
...
* gnu/packages/package-management.scm (gwl): Update to 0.1.1.
2017-12-19 12:27:43 +01:00
Efraim Flashner
ba1ba9fcbd
gnu: emulation-station: Add missing file-name field.
...
* gnu/packages/games.scm (emulation-station)[source]: Add missing
file-name field.
2017-12-19 12:19:04 +02:00
Roel Janssen
28fc96cb1e
gnu: Update r-cowplot to 0.9.2.
...
* gnu/packages/statistics.scm (r-cowplot): Update to 0.9.2.
2017-12-19 10:47:19 +01:00
Ludovic Courtès
a1ac7bf361
tests: Adjust php-fpm test to new nginx API.
...
Fixes <https://bugs.gnu.org/29769 >.
Reported by Mark H Weaver <mhw@netris.org>.
This is a followup to 8b223ceac4
.
* gnu/tests/web.scm (%php-fpm-nginx-server-blocks): Turn 'listen' into a
list.
2017-12-19 09:53:56 +01:00
Leo Famulari
4a408d847e
gnu: mpd: Update to 0.20.13.
...
* gnu/packages/mpd.scm (mpd): Update to 0.20.13.
2017-12-19 02:28:06 -05:00
Leo Famulari
4fad6598c6
gnu: keepassxc: Update to 2.2.4.
...
* gnu/packages/password-utils.scm (keepassxc): Update to 2.2.4.
2017-12-19 01:18:24 -05:00
Leo Famulari
4498cbd7ad
gnu: GnuPG pinentry: Update to 1.1.0.
...
* gnu/packages/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-gnome3,
pinentry-qt): Update to 1.1.0.
2017-12-18 23:25:20 -05:00
Mark H Weaver
7a6a08c945
gnu: linux-libre: Update to 4.14.7.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.7.
(%linux-libre-hash): Update hash.
2017-12-18 19:52:02 -05:00
Mark H Weaver
48e1f44415
gnu: linux-libre@4.9: Update to 4.9.70.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.70.
2017-12-18 19:51:22 -05:00
Mark H Weaver
86300e61b9
gnu: linux-libre@4.4: Update to 4.4.106.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.106.
2017-12-18 19:50:39 -05:00
Marius Bakke
98bd11cfe7
gnu: termite: Update to 13.
...
* gnu/packages/terminals.scm (termite): Update to 13.
2017-12-19 01:37:22 +01:00
Marius Bakke
972fa87039
gnu: pcsc-lite: Update to 1.8.23.
...
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.23.
[arguments]<#:configure-flags>: Add "--disable-libsystemd".
[license]: Adjust to removed sd-daemon files.
2017-12-19 01:30:14 +01:00
Marius Bakke
937790df9d
gnu: qemu: Update to 2.10.2.
...
* gnu/packages/patches/qemu-CVE-2017-15118.patch,
gnu/packages/patches/qemu-CVE-2017-15119.patch,
gnu/packages/patches/qemu-CVE-2017-15268.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/virtualization.scm (qemu): Update to 2.10.2.
[source](patches): Remove obsolete.
2017-12-19 01:15:09 +01:00
Marius Bakke
2ea3333504
gnu: libjpeg-turbo: Update to 1.5.3.
...
* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.3.
2017-12-18 23:25:20 +01:00
Marius Bakke
7bd9af7376
gnu: libsodium: Update to 1.0.16.
...
* gnu/packages/crypto.scm (libsodium): Update to 1.0.16.
2017-12-18 23:25:20 +01:00
Marius Bakke
8e9b3c6647
gnu: expect: Update to 5.45.3.
...
* gnu/packages/tcl.scm (expect): Update to 5.45.3.
2017-12-18 23:25:20 +01:00
Kei Kebreau
63dc763816
gnu: deutex: Update to 5.1.0.
...
* gnu/packages/games.scm (deutex): Update to 5.1.0.
2017-12-18 17:19:58 -05:00
Kei Kebreau
147d42fc03
gnu: emacspeak: Update to 47.0.
...
* gnu/packages/emacs.scm (emacspeak): Update to 47.0.
[source]: Remove snippet.
[arguments]: Set SHELL environment variable.
2017-12-18 16:50:45 -05:00
Efraim Flashner
91675d5082
gnu: rsync: Patch CVE-2017-{16548,17433,17434}.
...
* gnu/packages/rsync.scm (rsync)[source]: Add patches.
[properties]: Mark CVE-2017-15994 as not relevant.
* gnu/packages/patches/rsync-CVE-2017-16548.patch,
gnu/packages/patches/rsync-CVE-2017-17433.patch,
gnu/packages/patches/rsync-CVE-2017-17433-fix-tests.patch,
gnu/packages/patches/rsync-CVE-2017-17434-pt1.patch,
gnu/packages/patches/rsync-CVE-2017-17434-pt2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
2017-12-18 22:53:46 +02:00
Ludovic Courtès
b50a9cc008
gnu: psm: Update home page URL.
...
* gnu/packages/linux.scm (psm)[home-page]: Update.
[source](uri): Use it.
2017-12-18 17:52:58 +01:00
Ludovic Courtès
4e9dfe399b
gnu: Fix ambiguous 'zip' reference.
...
* gnu/packages/photo.scm: Hide 'zip' from (srfi srfi-1).
2017-12-18 17:52:58 +01:00
Mathieu Othacehe
9f1e39d1fc
system: examples: Add a template for BeagleBone Black.
...
* gnu/system/examples/beaglebone-black.tmpl: New file.
* Makefile.am (EXAMPLES): Add it.
* gnu/system/install.scm (/etc/configuration-files): Add it.
2017-12-18 15:28:14 +01:00
Tobias Geerinckx-Rice
af8c547d33
gnu: claws-mail: Update to 3.16.0.
...
* gnu/packages/mail.scm (claws-mail): Update to 3.16.0.
2017-12-18 15:22:08 +01:00
Clément Lassieur
b05e8ee120
services: nginx: Allow to add raw content to the server blocks.
...
* doc/guix.texi (Web Services): Document 'raw-content'.
* gnu/services/web.scm (<nginx-server-configuration>)[raw-content]: New field.
(emit-nginx-server-config): Add it.
2017-12-18 12:03:14 +01:00
Clément Lassieur
8b223ceac4
services: nginx: Replace 'http-port' and 'https-port' with 'listen'.
...
* doc/guix.texi (Web Services, Version Control Services): Update accordingly.
* gnu/services/certbot.scm (certbot-nginx-server-configurations): Likewise.
* gnu/services/version-control.scm (%cgit-configuration-nginx): Likewise.
* gnu/services/web.scm (<nginx-server-configuration>,
emit-nginx-server-config): Likewise.
* gnu/tests/version-control.scm (%cgit-configuration-nginx,
%git-nginx-configuration): Likewise.
* gnu/tests/web.scm (%nginx-servers, %php-fpm-nginx-server-blocks): Likewise.
2017-12-18 12:03:14 +01:00
Ricardo Wurmus
f1a2b1cb20
gnu: r-seurat: Update to 2.1.0.
...
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.1.0.
[propagated-inputs]: Add r-diffusionmap, r-dtw, r-ggjoy, r-hmisc, r-ica,
r-mass, r-matrix, r-nmf, r-plotly, r-sdmtools, r-tidyr; remove r-plyr,
r-rcppeigen, r-fastica.
2017-12-18 12:01:35 +01:00
Ricardo Wurmus
fff9b88439
gnu: Add r-diffusionmap.
...
* gnu/packages/graph.scm (r-diffusionmap): New variable.
2017-12-18 12:01:35 +01:00
Ricardo Wurmus
007f6d9885
gnu: Add r-ggjoy.
...
* gnu/packages/cran.scm (r-ggjoy): New variable.
2017-12-18 12:01:34 +01:00
Ricardo Wurmus
f90018e568
gnu: Add r-ggridges.
...
* gnu/packages/cran.scm (r-ggridges): New variable.
2017-12-18 12:01:34 +01:00
Ricardo Wurmus
ae3f207951
gnu: Add r-scatterplot3d.
...
* gnu/packages/cran.scm (r-scatterplot3d): New variable.
2017-12-18 12:01:34 +01:00
Ricardo Wurmus
15ef07f00e
gnu: Add r-sdmtools.
...
* gnu/packages/cran.scm (r-sdmtools): New variable.
2017-12-18 12:01:34 +01:00
Ricardo Wurmus
bf025ff6f2
gnu: Add r-dtw.
...
* gnu/packages/cran.scm (r-dtw): New variable.
2017-12-18 12:01:34 +01:00
Ricardo Wurmus
ae16426007
gnu: Add r-ica.
...
* gnu/packages/cran.scm (r-ica): New variable.
2017-12-18 12:01:34 +01:00
Ricardo Wurmus
8271b8d22a
gnu: r-seurat: Fix ModularityOptimizer.jar.
...
* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class
attribute in manifest.
2017-12-18 12:01:34 +01:00
Ricardo Wurmus
b6313997ad
gnu: qmidiarp: Update to 0.6.5.
...
* gnu/packages/music.scm (qmidiarp): Update to 0.6.5.
2017-12-18 12:01:33 +01:00
Ricardo Wurmus
cf31d5e114
gnu: Add noise-repellent.
...
* gnu/packages/audio.scm (noise-repellent): New variable.
2017-12-18 12:01:33 +01:00
Ricardo Wurmus
13edf1b9ea
gnu: Add aj-snapshot.
...
* gnu/packages/music.scm (aj-snapshot): New variable.
2017-12-18 12:01:33 +01:00
Ricardo Wurmus
39b335849b
gnu: Add jack-capture.
...
* gnu/packages/music.scm (jack-capture): New variable.
2017-12-18 12:01:33 +01:00
Ricardo Wurmus
4071379357
gnu: Add qjackrcd.
...
* gnu/packages/audio.scm (qjackrcd): New variable.
2017-12-18 12:01:33 +01:00
Ricardo Wurmus
92b36e3aa5
gnu: Add whysynth.
...
* gnu/packages/music.scm (whysynth): New variable.
2017-12-18 12:01:33 +01:00
Ricardo Wurmus
f7ce213404
gnu: Add sonivox-eas.
...
* gnu/packages/music.scm (sonivox-eas): New variable.
2017-12-18 12:01:32 +01:00
Leo Famulari
2ca712bdba
vm: Pass the host's /dev/urandom to the guest at /dev/hwrng.
...
* gnu/build/vm.scm (load-in-linux-vm): Use QEMU's virtio-rng-pci.
* gnu/system/vm.scm (common-qemu-options): Likewise.
2017-12-18 00:39:40 -05:00
Mark H Weaver
87dbb634a9
gnu: openssl: Update replacement to 1.0.2n [fixes CVE-2017-{3737,3738}].
...
* gnu/packages/tls.scm (openssl)[replacement]: Use openssl-1.0.2n.
(openssl-1.0.2m): Replace with ...
(openssl-1.0.2n): ... this updated version. Update comment.
2017-12-17 21:10:45 -05:00
Christopher Baines
98cf8ca89a
gnu: Add mod-wsgi.
...
* gnu/packages/web.scm (mod-wsgi): New variable.
2017-12-17 20:46:46 +00:00
Christopher Baines
e0d96774dd
gnu: system: vm: Use loose cache for 9p file system.
...
This improves the performance of the shared store for operations involving
lots of files, e.g. searching through the store.
* gnu/system/vm.scm (mapping->file-system): Add cache=loose to options.
2017-12-17 20:46:40 +00:00