Commit Graph

39265 Commits

Author SHA1 Message Date
Ricardo Wurmus 22b2d8b97f
gnu: r-quantmod: Update to 0.4-15.
* gnu/packages/cran.scm (r-quantmod): Update to 0.4-15.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus f5ec882390
gnu: r-tinytex: Update to 0.14.
* gnu/packages/cran.scm (r-tinytex): Update to 0.14.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus db794146ac
gnu: r-xfun: Update to 0.8.
* gnu/packages/cran.scm (r-xfun): Update to 0.8.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus 1f7e8d49c3
gnu: r-performanceanalytics: Update to 1.5.3.
* gnu/packages/cran.scm (r-performanceanalytics): Update to 1.5.3.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus 4ae5f18a25
gnu: r-abbyyr: Update to 0.5.5.
* gnu/packages/cran.scm (r-abbyyr): Update to 0.5.5.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus 5b86bcfa68
gnu: r-phangorn: Update to 2.5.5.
* gnu/packages/bioinformatics.scm (r-phangorn): Update to 2.5.5.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus 7f17e60ab7
gnu: r-tximport: Update to 1.12.3.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.3.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus dafd290d21
gnu: r-genomicfeatures: Update to 1.36.3.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.3.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus c40bba2b36
gnu: r-genomicalignments: Update to 1.20.1.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.1.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus 888085c36c
gnu: r-biomart: Update to 2.40.1.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.1.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus f0c244229a
gnu: r-edger: Update to 3.26.5.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.5.
2019-06-29 01:34:43 +02:00
Ricardo Wurmus 0253b5d881
gnu: r-systempiper: Update to 1.18.2.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.2.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus 3e265d968b
gnu: r-rsubread: Update to 1.34.4.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.4.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus 3c944fdace
gnu: r-genomicscores: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.8.1.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus aff3ecbfda
gnu: r-dose: Update to 3.10.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.2.
2019-06-29 01:34:42 +02:00
Marius Bakke 4289d1d71c
gnu: python-llvmlite: Build against LLVM 7.
This is a follow-up to commit c5296e205b.

* gnu/packages/llvm.scm (llvm-7, clang-runtime-7, clang-7): New public variables.
(python-llvmlite)[inputs]: Inherit from LLVM-7 instead of LLVM.
2019-06-28 20:53:20 +02:00
Jakob L. Kreuze 4ee2cce327
gnu: Add beets-bandcamp.
* gnu/packages/music.scm (beets-bandcamp): New variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-06-28 14:22:05 +02:00
Nicolas Goaziou 9d83e60e51
gnu: musescore: Update to 3.2.
* gnu/packages/music.scm (musescore): Update to 3.2.
2019-06-28 10:46:45 +02:00
Nicolas Goaziou 458f410bc2
gnu: snap: Update to 5.
* gnu/packages/education.scm (snap): Update to 5.
2019-06-28 10:11:12 +02:00
Efraim Flashner 5b786db86c
gnu: atlas: All phases return #t.
* gnu/packages/maths.scm (atlas)[arguments]: Ensure all custom phases
return #t.
2019-06-28 10:39:11 +03:00
Nicolas Goaziou 2668e06efd
gnu: krita: Update to 4.2.2.
* gnu/packages/kde.scm (krita): Update to 4.2.2.
[source]: Don't use NAME in source URI.
[arguments]: Remove obsolete configure flags.
[native-inputs]: Add pkg-config.
[inputs]: Add quazip, reorder alphabetically.
2019-06-28 09:34:25 +02:00
Nicolas Goaziou 09debcf5aa
gnu: Add quazip.
* gnu/packages/compression.scm (quazip): New variable.
2019-06-28 09:34:25 +02:00
Mark H Weaver fbb5b688b6
gnu: linux-libre@4.14: Update to 4.14.131.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.131.
(%linux-libre-4.14-hash): Update hash.
2019-06-27 18:58:45 -04:00
Mark H Weaver 1ad3e3f9f1
gnu: linux-libre@4.9: Update to 4.9.184.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.184.
2019-06-27 18:58:06 -04:00
Mark H Weaver 9969b436af
gnu: linux-libre@4.4: Update to 4.4.184.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.184.
2019-06-27 18:57:10 -04:00
Ricardo Wurmus bae0f8af21
gnu: pigx-scrnaseq: Update to 0.0.8.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 0.0.8.
2019-06-27 23:23:29 +02:00
Rutger Helling 6ad087b821
gnu: mame: Update to 0.211.
* gnu/packages/emulators.scm (mame): Update to 0.211.
2019-06-27 13:28:33 +02:00
Ludovic Courtès 066eeae1a1
packages: 'specification->package+output' distinguishes "no output specified".
Until now the caller couldn't tell the different between a spec like
"foo:out" and one like "foo".  This change allows users to distinguish
between these two cases.

* gnu/packages.scm (specification->package+output): Disable output
membership test when OUTPUT = #f and SUB-DRV = #f.
* tests/packages.scm ("specification->package+output")
("specification->package+output invalid output")
("specification->package+output no default output")
("specification->package+output invalid output, no default"): New tests.
2019-06-27 11:14:41 +02:00
Ludovic Courtès c25b44d640
accounts: Use 'fsync' instead of 'fdatasync'.
* gnu/build/accounts.scm (catch-ENOSYS): Remove.
(database-writer): Use 'fsync' instead of 'fdatasync'.
2019-06-27 11:14:40 +02:00
Rutger Helling b09e4960be
gnu: dosbox: Update to 0.74-3.
* gnu/packages/emulators.scm (dosbox): Update to 0.74-3.
2019-06-27 10:24:11 +02:00
Arun Isaac 4ffed73419
gnu: rep-gtk: Update to 0.90.8.3.
* gnu/packages/sawfish.scm (rep-gtk): Update to 0.90.8.3.
[source]: Use HTTPS URI.
[arguments]: Add remove-autogen phase.
[native-inputs]: Add autoconf, automake and libtool.
[home-page]: Update URI.
2019-06-27 12:22:04 +05:30
Benjamin Slade edccf761e3
gnu: sawfish: Update to 1.12.0.
* gnu/packages/sawfish.scm (sawfish): Update to 1.12.0.
[source]: Use HTTPS URI.
[home-page]: Update URI.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2019-06-27 12:21:09 +05:30
Vagrant Cascadian 7a70e7ca04
gnu: electron-cash: Update to 4.0.7.
* gnu/packages/finance (electron-cash): Update to 4.0.7.
2019-06-26 20:14:45 -07:00
Tobias Geerinckx-Rice ba912479e8
Revert "gnu: openssh: Don't create the PRIVSEP_PATH directory."
This reverts commit 46475f72ab.
2019-06-27 00:21:16 +02:00
Tobias Geerinckx-Rice 1ebb908d44
Revert "gnu: openssh: Clean-up custom install phase."
This reverts commit 7754136e46.
2019-06-27 00:21:16 +02:00
Nicolas Goaziou cac6c3bad5
gnu: supertux: Fix homepage.
* gnu/packages/games.scm (supertux)[homepage]: Fix URL.
2019-06-26 19:45:34 +02:00
Andreas Enge 75a137da76
gnu: Add texmacs.
* gnu/packages/text-editors.scm (texmacs): New variable.
2019-06-26 18:23:02 +02:00
Ricardo Wurmus 49ad11e958
gnu: python-pathpy: Update to 11.5.0.
* gnu/packages/python-xyz.scm (python-pathpy): Update to 11.5.0.
[outputs]: Add separate "doc" output.
[native-inputs]: Add python-jaraco-packaging.
[arguments]: Enable tests; uncomment "build-doc" and "install-doc" phases;
replace "check" phase to skip flaky test.
2019-06-26 16:24:59 +02:00
Ricardo Wurmus 37c173d162
gnu: Add python-jaraco-packaging.
* gnu/packages/python-xyz.scm (python-jaraco-packaging): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 05b3dcbe32
gnu: Add python-pytest-virtualenv.
* gnu/packages/python-check.scm (python-pytest-virtualenv): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 7d5ffecba5
gnu: Add python-pytest-fixture-config.
* gnu/packages/python-check.scm (python-pytest-fixture-config): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 21e2c55945
gnu: Add python-pytest-shutil.
* gnu/packages/python-check.scm (python-pytest-shutil): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 3b89476b70
gnu: Add python-pytest-flake8.
* gnu/packages/python-check.scm (python-pytest-flake8): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 85bf6798e6
gnu: Add python-pytest-checkdocs.
* gnu/packages/python-check.scm (python-pytest-checkdocs): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 15b6561769
gnu: Add python-importlib-metadata.
* gnu/packages/python-xyz.scm (python-importlib-metadata): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 94f960ffed
gnu: Add python-zipp.
* gnu/packages/python-compression.scm (python-zipp): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 724a350c87
gnu: Add python-setuptools-git.
* gnu/packages/python-xyz.scm (python-setuptools-git): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 3e8f76d801
gnu: Add python-contextlib2.
* gnu/packages/python-xyz.scm (python-contextlib2): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus bb74ea0990
gnu: Add python-pathlib2.
* gnu/packages/python-xyz.scm (python-pathlib2): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 37cb4e5b8e
gnu: Add mesa-opencl-icd.
* gnu/packages/gl.scm (mesa-opencl-icd): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus fae4294246
gnu: Add mesa-opencl.
* gnu/packages/gl.scm (mesa-opencl): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus a2cc25ab96
gnu: Add libclc.
* gnu/packages/llvm.scm (libclc): New variable.
2019-06-26 16:24:58 +02:00
Ricardo Wurmus 4980b0b5b9
gnu: libcxx: Update hash.
This is a follow-up to commit c5296e205b, which
updated llvm.

* gnu/packages/llvm.scm (libcxx): Update hash.
2019-06-26 16:24:58 +02:00
Guillaume LE VAILLANT 072e986ec8
gnu: Add gramps
* gnu/packages/genealogy.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-26 15:59:58 +02:00
Guillaume LE VAILLANT ee34be7375
gnu: Add osm-gps-map
* gnu/packages/geo.scm (osm-gps-map): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-26 15:59:58 +02:00
Guillaume LE VAILLANT f825e60590
gnu: Add python-bsddb3
* gnu/packages/python-xyz.scm (python-bsddb3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-26 15:59:58 +02:00
Ludovic Courtès 83817158b2
gnu: python-on-guile: Wrap 'python' executable.
* gnu/packages/guile-xyz.scm (python-on-guile)[arguments]: Add 'wrap'
phase.
2019-06-26 15:59:58 +02:00
Ludovic Courtès 5d5edb88bd
gnu: python-on-guile: Update to 00a51a2.
* gnu/packages/guile-xyz.scm (python-on-guile): Update to 00a51a2.
2019-06-26 15:59:58 +02:00
Amar Singh 67d24b15ca
gnu: Add celestia-gtk.
* gnu/packages/astronomy.scm (celestia-gtk): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-06-26 15:59:58 +02:00
Amar Singh ca310f65c5
gnu: Add celestia.
* gnu/packages/astronomy.scm (celestia): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-26 15:59:58 +02:00
Ricardo Wurmus 2cb738a6ad
gnu: Add r-rsubread.
* gnu/packages/bioconductor.scm (r-rsubread): New variable.
2019-06-26 15:52:10 +02:00
Pierre Neidhardt 536dcafbf9
gnu: Add sbcl-cl-cookie.
* gnu/packages/lisp.scm (sbcl-cl-cookie): New variable.
2019-06-26 13:39:10 +02:00
Pierre Neidhardt 167fec29f5
gnu: Add sbcl-cl-reexport.
* gnu/packages/lisp.scm (sbcl-cl-reexport): New variable.
2019-06-26 13:39:02 +02:00
Pierre Neidhardt 63015205d8
gnu: Add sbcl-closure-common.
* gnu/packages/lisp.scm (sbcl-closure-common): New variable.
2019-06-26 13:03:58 +02:00
Pierre Neidhardt 6ac69aae7f
gnu: Add sbcl-ieee-floats.
* gnu/packages/lisp.scm (sbcl-ieee-floats): New variable.
2019-06-26 13:03:50 +02:00
Pierre Neidhardt 9f641dd705
gnu: Add sbcl-iolib+sockets.
* gnu/packages/lisp.scm (sbcl-iolib+sockets): New variable.
2019-06-26 13:02:29 +02:00
Pierre Neidhardt 28f3e3b1f4
gnu: Add sbcl-iolib+streams.
* gnu/packages/lisp.scm (sbcl-iolib+streams): New variable.
2019-06-26 13:02:29 +02:00
Pierre Neidhardt 5b686054b5
gnu: Add sbcl-iolib+syscalls.
* gnu/packages/lisp.scm (sbcl-iolib+syscalls): New variable.
2019-06-26 13:02:29 +02:00
Pierre Neidhardt a3531660e6
gnu: Add sbcl-iolib+multiplex.
* gnu/packages/lisp.scm (sbcl-iolib+multiplex): New variable.
2019-06-26 13:02:29 +02:00
Pierre Neidhardt ef656e119a
gnu: Add sbcl-iolib.
* gnu/packages/lisp.scm (sbcl-iolib): New variable.
2019-06-26 13:02:28 +02:00
Pierre Neidhardt 216dd6f6af
gnu: Add sbcl-iolib.grovel.
* gnu/packages/lisp.scm (sbcl-iolib.grovel): New variable.
2019-06-26 13:02:28 +02:00
Pierre Neidhardt 5dffca3377
gnu: Add sbcl-iolib.base.
* gnu/packages/lisp.scm (sbcl-iolib.base): New variable.
2019-06-26 13:02:28 +02:00
Pierre Neidhardt 213937fb36
gnu: Add sbcl-iolib.common-lisp.
* gnu/packages/lisp.scm (sbcl-iolib.common-lisp): New variable.
2019-06-26 13:02:28 +02:00
Pierre Neidhardt 63158bf6e9
gnu: Add sbcl-iolib.conf.
* gnu/packages/lisp.scm (sbcl-iolib.conf): New variable.
2019-06-26 13:02:28 +02:00
Pierre Neidhardt 69c68b470f
gnu: Add sbcl-iolib.asdf.
* gnu/packages/lisp.scm (sbcl-iolib.asdf): New variable.
2019-06-26 13:02:28 +02:00
Pierre Neidhardt ccba380a60
gnu: Add swap-bytes.
* gnu/packages/lisp.scm (cl-swap-bytes, ecl-swap-bytes, sbcl-swap-bytes): New variables.
2019-06-26 13:02:28 +02:00
Pierre Neidhardt d2a93264c3
gnu: Add idna.
* gnu/packages/lisp.scm (cl-idna, ecl-idna, sbcl-idna): New variables.
2019-06-26 13:02:28 +02:00
Maxim Cournoyer dc7c489605
gnu: Add emacs-gnugo.
* gnu/packages/emacs-xyz.scm (emacs-gnugo): New variable.
2019-06-26 11:08:45 +09:00
Maxim Cournoyer d558e2362e
gnu: Add emacs-xpm.
* gnu/packages/emacs-xyz.scm (emacs-xpm): New variable.
2019-06-26 11:08:45 +09:00
Maxim Cournoyer 2fdfa195a6
gnu: Add emacs-ascii-art-to-unicode.
* gnu/packages/emacs-xyz.scm (emacs-ascii-art-to-unicode): New variable.
2019-06-26 11:08:45 +09:00
Maxim Cournoyer dae2eb1c12
gnu: Add python-typed-ast.
* gnu/packages/python-xyz.scm (python-typed-ast): New variable.
2019-06-26 11:08:44 +09:00
Mark H Weaver 5a7e7ca1d7
gnu: linux-libre: Update to 5.1.15.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.15.
(%linux-libre-hash): Update hash.
2019-06-25 19:07:39 -04:00
Mark H Weaver a579f93197
gnu: linux-libre@4.19: Update to 4.19.56.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.56.
(%linux-libre-4.19-hash): Update hash.
2019-06-25 19:06:59 -04:00
Mark H Weaver f6d78ff9b6
gnu: linux-libre@4.14: Update to 4.14.130.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.130.
(%linux-libre-4.14-hash): Update hash.
2019-06-25 19:06:06 -04:00
Tobias Geerinckx-Rice 10a303a4a5
gnu: xcalc: Update to 1.1.0.
* gnu/packages/xorg.scm (xcalc): Update to 1.1.0.
2019-06-25 23:52:05 +02:00
Mathieu Othacehe fdbf4447bc
linux-initrd: Fix cross compilation.
* gnu/system/linux-initrd.scm (default-initrd-modules): Check system name
against %current-target-system first in case we are cross-compiling.
2019-06-25 21:38:42 +02:00
Mathieu Othacehe d8dbfbce60
gnu: bash-completion: Fix cross-compilation.
* gnu/packages/bash.scm (bash-completion)[arguments]: Search for util-linux in
native-inputs and inputs during "remove-redundant-completions" phase.
2019-06-25 21:34:36 +02:00
Efraim Flashner 6c6a049b13
gnu: perl-parent: Part of Perl core.
* gnu/packages/perl.scm (perl-parent): Mark deprecated.
(perl-file-temp, perl-moose)[propagated-inputs]: Remove perl-parent.
2019-06-25 21:17:36 +03:00
Efraim Flashner a402b088e7
gnu: perl-base: Part of Perl core.
* gnu/packages/perl.scm (perl-base): Mark deprecated.
(perl-class-accessor, perl-tree-simple-visitorfactory)
[propagated-inputs]: Remove perl-base.
2019-06-25 21:17:32 +03:00
Efraim Flashner 201a25a311
gnu: perl-uri: Update to 1.76.
* gnu/packages/web.scm (perl-uri): Update to 1.76.
[source]: Use new upstream source.
2019-06-25 21:17:08 +03:00
Efraim Flashner 887ae6175d
gnu: perl-libwww: Update to 6.39.
* gnu/packages/web.scm (perl-libwww): Update to 6.39.
2019-06-25 21:17:04 +03:00
Timotej Lazar 455e6a31d4
gnu: cmus: Update to 2.8.0.
* gnu/packages/music.scm (cmus): Update to 2.8.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-06-25 20:26:37 +03:00
Tobias Geerinckx-Rice 535fc98797
gnu: sessreg: Update to 1.1.2.
* gnu/packages/xorg.scm (sessreg): Update to 1.1.2.
2019-06-25 18:56:23 +02:00
Efraim Flashner 7754136e46
gnu: openssh: Clean-up custom install phase.
* gnu/packages/ssh.scm (openssh)[arguments]: Factor out outputs in
custom 'install phase to clean-up code.
2019-06-25 19:47:21 +03:00
Efraim Flashner 46475f72ab
gnu: openssh: Don't create the PRIVSEP_PATH directory.
* gnu/packages/ssh.scm (openssh)[arguments]: Modify the custom 'install
phase to remove the /var directory.
2019-06-25 19:47:17 +03:00
Efraim Flashner 8566d8793b
gnu: toot: Don't install the Makefile.
* gnu/packages/mastodon.scm (toot)[arguments]: Add custom phase to
prevent installing data_files.
2019-06-25 19:09:51 +03:00
Katherine Cox-Buday 31263ec227
gnu: Add fare-utils.
* gnu/packages/lisp.scm (fare-utils): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-25 17:41:25 +02:00
Katherine Cox-Buday 98b9409c16
gnu: Add metabang-bind.
* gnu/packages/lisp.scm (metabang-bind): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-25 17:41:25 +02:00
Katherine Cox-Buday 245b19cae1
gnu: Add burgled-batteries3.
* gnu/packages/lisp.scm (burgled-batteries3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-25 17:41:25 +02:00
Katherine Cox-Buday 2ddc55c6dc
gnu: Add cl-quickcheck.
* gnu/packages/lisp.scm (cl-quickcheck): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-25 17:41:25 +02:00