93e8731dcb
gnu: perl-sql-abstract: Update to 1.85.
...
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.85.
2018-03-17 16:37:19 +01:00
9f388b1ee1
Merge branch 'master' into core-updates
2018-03-17 01:18:37 -04:00
6cbee49d66
gnu: All snippets report errors using exceptions, else return #t.
...
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm,
gnu/packages/bioinformatics.scm, gnu/packages/cdrom.scm,
gnu/packages/chez.scm, gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/cross-base.scm, gnu/packages/crypto.scm, gnu/packages/cups.scm,
gnu/packages/databases.scm, gnu/packages/dns.scm, gnu/packages/emacs.scm,
gnu/packages/emulators.scm, gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm, gnu/packages/fpga.scm,
gnu/packages/freedesktop.scm, gnu/packages/ftp.scm, gnu/packages/games.scm,
gnu/packages/gcc.scm, gnu/packages/geo.scm, gnu/packages/ghostscript.scm,
gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm, gnu/packages/graphics.scm, gnu/packages/gtk.scm,
gnu/packages/guile.scm, gnu/packages/irc.scm, gnu/packages/java.scm,
gnu/packages/kerberos.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm,
gnu/packages/lxde.scm, gnu/packages/machine-learning.scm,
gnu/packages/mail.scm, gnu/packages/maths.scm, gnu/packages/messaging.scm,
gnu/packages/monitoring.scm, gnu/packages/mp3.scm, gnu/packages/music.scm,
gnu/packages/netpbm.scm, gnu/packages/networking.scm, gnu/packages/node.scm,
gnu/packages/nvi.scm, gnu/packages/ocaml.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/php.scm, gnu/packages/plotutils.scm,
gnu/packages/pretty-print.scm, gnu/packages/profiling.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm,
gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/robotics.scm,
gnu/packages/sawfish.scm, gnu/packages/scanner.scm, gnu/packages/scheme.scm,
gnu/packages/scribus.scm, gnu/packages/sdl.scm,
gnu/packages/serialization.scm, gnu/packages/shells.scm,
gnu/packages/slang.scm, gnu/packages/smalltalk.scm, gnu/packages/ssh.scm,
gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/tbb.scm,
gnu/packages/terminals.scm, gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm, gnu/packages/textutils.scm,
gnu/packages/tls.scm, gnu/packages/unrtf.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xorg.scm:
In all snippets, report errors using exceptions, or else return #t.
2018-03-16 09:08:31 -04:00
5e5ac7102c
gnu: Add python-pyarrow.
...
* gnu/packages/databases.scm (python-pyarrow, python2-pyarrow): New variables.
2018-03-15 10:57:52 -04:00
dae7661a0d
gnu: Add apache-arrow.
...
* gnu/packages/databases.scm (apache-arrow): New variable.
2018-03-15 10:57:52 -04:00
9a92b9e61a
gnu: gdbm: Update to 1.14.1.
...
* gnu/packages/databases.scm (gdbm): Update to 1.14.1.
2018-03-14 22:11:34 +01:00
8c72ed923d
Merge branch 'master' into core-updates
2018-03-14 17:37:20 +01:00
189be331ac
build-system/gnu: Add 'bootstrap' phase.
...
This factorizes what has become a widespread idiom.
* guix/build/gnu-build-system.scm (%bootstrap-scripts): New variable.
(bootstrap): New procedure.
(%standard-phases): Add it after 'unpack'.
* guix/build/ant-build-system.scm (%standard-phases): Delete 'bootstrap.
* guix/build/asdf-build-system.scm (%standard-phases/source)
(%standard-phases): Likewise.
* guix/build/cargo-build-system.scm (%standard-phases): Likewise.
* guix/build/cmake-build-system.scm (%standard-phases): Likewise.
* guix/build/dub-build-system.scm (%standard-phases): Likewise.
* guix/build/emacs-build-system.scm (%standard-phases): Likewise.
* guix/build/font-build-system.scm (%standard-phases): Likewise.
* guix/build/go-build-system.scm (%standard-phases): Likewise.
* guix/build/haskell-build-system.scm (%standard-phases): Likewise.
* guix/build/minify-build-system.scm (%standard-phases): Likewise.
* guix/build/ocaml-build-system.scm (%standard-phases): Likewise.
* guix/build/perl-build-system.scm (%standard-phases): Likewise.
* guix/build/python-build-system.scm (%standard-phases): Likewise.
* guix/build/r-build-system.scm (%standard-phases): Likewise.
* guix/build/ruby-build-system.scm (%standard-phases): Likewise.
* guix/build/scons-build-system.scm (%standard-phases): Likewise.
* guix/build/texlive-build-system.scm (%standard-phases): Likewise.
* guix/build/waf-build-system.scm (%standard-phases): Likewise.
* gnu/packages/audio.scm (faad2)[arguments]: Replace 'bootstrap.
(soundtouch, cuetools, bluez-alsa): Remove 'arguments'.
(cava)[arguments]: Replace 'bootstrap.
* gnu/packages/backup.scm (rdup): Remove 'bootstrap.
* gnu/packages/bioinformatics.scm (seek)[arguments]: Replace
'bootstrap.
* gnu/packages/bioinformatics.scm (htslib-for-sambamba): Remove
'arguments'.
* gnu/packages/ci.scm (hydra, cuirass): Remove 'bootstrap'.
* gnu/packages/crypto.scm (libb2): Remove #:phases.
* gnu/packages/databases.scm (guile-wiredtiger): Likewise.
* gnu/packages/debug.scm (stress-make): Remove 'bootstrap'.
* gnu/packages/documentation.scm (asciidoc): Likewise.
* gnu/packages/fontutils.scm (libuninameslist): Remove 'arguments'.
* gnu/packages/ftp.scm (weex): Remove 'arguments'.
* gnu/packages/game-development.scm (ois): Remove 'arguments'.
* gnu/packages/games.scm (pioneer): Remove 'bootstrap.
* gnu/packages/gnome.scm (vte-ng, byzanz): Replace 'bootstrap.
(arc-theme): Remove 'arguments'.
(faba-icon-theme): Remove 'bootstrap.
(arc-icon-theme): Remove 'arguments'.
* gnu/packages/gnunet.scm (guile-gnunet): Likewise.
* gnu/packages/gtk.scm (guile-rsvg): Likewise.
* gnu/packages/guile.scm (mcron2): Remove 'bootstrap.
(guile-bash): Remove #:phases.
(guile-git): Remove 'bootstrap.
(guile-syntax-highlight): Remove 'arguments'.
(guile-sjson): Likewise.
* gnu/packages/java.scm (classpath-devel): Remove 'bootstrap.
* gnu/packages/kodi.scm (libdvdnav/kodi)
(libdvdread/kodi, libdvdcss/kodi): Likewise.
* gnu/packages/libreoffice.scm (hunspell): Remove 'arguments'.
* gnu/packages/libusb.scm (hidapi): Likewise.
* gnu/packages/linux.scm (bridge-utils): Rename 'bootstrap' to
'patch-stuff'; move it before 'bootstrap', without autoreconf
invocation.
(eudev): Rename 'bootstrap' to 'patch-file-names', without 'autogen.sh'
invocation; move it before 'bootstrap.
(gpm): Replace 'bootstrap'.
(f2fs-tools): Remove 'arguments'.
(rng-tools): Remove #:phases.
* gnu/packages/messaging.scm (hexchat): Rename 'bootstrap' to
'copy-intltool-makefile'; remove "autoreconf" invocation and move before
'bootstrap'.
(libmesode): Remove 'arguments'.
(libstrophe): Likewise.
* gnu/packages/microcom.scm (microcom): Likewise.
* gnu/packages/networking.scm (libnet): Remove 'bootstrap.
* gnu/packages/onc-rpc.scm (libnsl): Remove 'arguments'.
* gnu/packages/package-management.scm (guix): Replace 'bootstrap.
* gnu/packages/sawfish.scm (librep): Remove 'arguments'.
* gnu/packages/version-control.scm (findnewest): Likewise.
* gnu/packages/video.scm (liba52, handbrake, motion): Replace
'bootstrap.
* gnu/packages/web.scm (fcgiwrap): Remove #:phases.
(tidy): Replace 'bootstrap.
(gumbo-parser): Remove #:phases.
* gnu/packages/wget.scm (wget2): Replace 'bootstrap.
* gnu/packages/wm.scm (i3lock-color): Remove #:phases.
* gnu/packages/xdisorg.scm (xclip): Likewise.
* gnu/packages/xml.scm (libxls): Replace 'bootstrap'.
* gnu/packages/xorg.scm (xf86-video-freedreno)
(xf86-video-intel): Remove #:phases.
* gnu/packages/zile.scm (zile-on-guile): Replace 'bootstrap.
2018-03-11 22:04:40 +01:00
7fa9cca84a
gnu: rocksdb: Update to 5.10.4.
...
* gnu/packages/databases.scm (rocksdb): Update to 5.10.4.
[source]: Substitute the unbundled copy of GNU Parallel.
[arguments]: Add "V=1" "USE_RTTI=1" and
"ROCKSDBTESTS_END=db_tailing_iter_test" to #:make-flags. Set #:test-target to
"check_some". Respect parallel jobs in 'build-release-libraries' phase and
rename to 'build'.
[license]: Update for changes in 5.5.4.
2018-03-04 17:54:39 +01:00
c553b08b49
gnu: python-apsw: Use invoke.
...
* gnu/packages/databases.scm (python-apsw)[arguments]: Use invoke.
2018-03-04 12:05:14 +02:00
f5c847ebd0
gnu: python-apsw: Declare a source file-name.
...
* gnu/packages/databases.scm (python-apsw)[source]: Declare a source
file-name.
2018-03-04 12:05:14 +02:00
703a8b7dc5
gnu: postgresql@9.6: Update to 9.6.8 [fixes CVE-2018-1058].
...
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.8.
2018-03-01 20:01:48 -05:00
bb17b2be49
gnu: postgresql: Update to 10.3 [fixes CVE-2018-1058].
...
* gnu/packages/databases.scm (postgresql): Update to 10.3.
2018-03-01 20:01:48 -05:00
e9802319f7
gnu: memcached: Update to 1.5.6.
...
* gnu/packages/databases.scm (memcached): Update to 1.5.6.
2018-03-01 20:00:12 -05:00
29c9c9c2c1
gnu: r-rmysql: Update to 0.10.14.
...
* gnu/packages/databases.scm (r-rmysql): Update to 0.10.14.
2018-03-01 21:28:53 +01:00
ff856cfdcc
gnu: python-pickleshare: Run the tests.
...
* gnu/packages/databases.scm (python-pickleshare)[arguments]: Replace CHECK-PHASE.
[native-inputs]: Add PYTHON-PYTEST.
2018-02-26 04:50:30 +01:00
ed519b3c1f
gnu: python-pickleshare: Update to 0.7.4.
...
* gnu/packages/databases.scm (python-pickleshare): Update to 0.7.4.
[source](uri): Use PYPI-URI.
[propagated-inputs]: Remove.
[properties]: Delay python2 variant.
(python2-pickleshare)[propagated-inputs]: Add PYTHON2-PATHLIB2.
2018-02-26 04:49:52 +01:00
cff07bde98
gnu: sqlite: Fix source URL.
...
* gnu/packages/databases.scm (sqlite)[source]: Change "/2017" to
"/2018".
2018-02-24 23:11:49 +01:00
eaa7b9664e
gnu: gdbm: Update to 1.14.
...
* gnu/packages/databases.scm (gdbm): Update to 1.14.
2018-02-20 19:54:24 +01:00
e83f62f947
gnu: sqlite: Update to 3.22.0.
...
* gnu/packages/databases.scm (sqlite): Update to 3.22.0.
2018-02-20 16:01:46 +01:00
150062f190
Merge branch 'master' into core-updates
2018-02-16 13:14:26 -05:00
8c078ddec4
gnu: perl-dbd-pg: Update to 3.7.4.
...
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.4.
2018-02-16 11:15:02 +01:00
efe2a2833c
Merge branch 'master' into core-updates
2018-02-09 01:46:34 -05:00
2c433a1612
gnu: postgresql: Update to 10.2 [CVE-2018-{1052,1053}].
...
* gnu/packages/databases.scm (postgresql): Update to 10.2.
2018-02-08 17:47:52 -05:00
e7ca634912
Merge branch 'master' into core-updates
2018-02-03 22:46:07 -05:00
9b32bf6e6c
gnu: Fix and improve the mongo-tools package.
...
The hash of the source for this package is wrong. Most probably because the
source was changed from a tarball to a git repository without updating the
hash. Fixing this seems to break the check phase, so I rewrote that as well,
making changes to the build and install phases as needed.
* gnu/packages/databases.scm (mongo-tools)[source]: Update the hash value.
[arguments]: Remove the different unpack path, as this isn't necessary when
using the git repository as a source. Move the list of tools to make it
accessible from multiple phases. Rewrite the build phase, getting it to
install the tools in to the location the tests seem to expect to find
them. Replace the check phase to run the tests for each tool
individually. Add an install phase to install the tools, now that go install
is not being run in the build phase.
[native-inputs]: Add go-github.com-smartystreets-goconvey as a native-input
as this is required for running the tests.
2018-02-01 20:21:25 +00:00
bee7bb315c
Merge branch 'master' into core-updates
2018-02-01 13:18:47 +01:00
33c88fcb25
gnu: Add mongo-tools.
...
* gnu/packages/databases.scm (mongo-tools): New variable.
2018-01-30 07:41:31 +00:00
5807172300
gnu: Add go-gopkg.in-mgo.v2.
...
* gnu/packages/databases.scm (go-gopkg.in-mgo.v2): New variable.
2018-01-30 07:41:30 +00:00
b9ed5ef3fb
gnu: Add sqlite-with-fts5.
...
* gnu/packages/databases.scm (sqlite-with-fts5): New variable.
2018-01-28 00:23:32 -05:00
b89d8a4271
Merge branch 'master' into core-updates
2018-01-26 00:15:26 -05:00
bbf9092b9d
gnu: 4store: Update URI.
...
* gnu/packages/databases.scm (4store)[source, home-page]: Update URI.
2018-01-26 00:09:19 +01:00
e074a655dd
Merge branch 'master' into core-updates
2018-01-19 23:59:20 -05:00
8d7b476ba9
gnu: mongodb: Fix indentation.
...
* gnu/packages/databases.scm (mongodb): Replace tabs with spaces.
2018-01-18 15:12:04 +02:00
7f6a607e2a
gnu: mysql: Update to 5.7.21.
...
* gnu/packages/databases.scm (mysql): Update to 5.7.21.
2018-01-18 15:12:02 +02:00
0076f5a98c
gnu: Remove redundant wrapping from packages using ruby-build-system.
...
Now that the build system does wrapping automatically, it can be removed from
the packages that do it manually.
* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove #:phases.
* gnu/packages/ruby.scm (ruby-redcloth)[arguments]: Remove #:phases.
(ruby-httpclient)[arguments]: Remove 'wrap-bin-httpclient from the modified
phases.
2018-01-14 22:16:26 +00:00
3cb3fa6747
guix: build: ruby-build-system: Install to the vendor directory
...
* guix/build/ruby-build-system.scm (install): Install gems to the vendor
directory, rather than the GEM_HOME. The vendor directory does not include
the version of ruby used to install the gem in the path, which makes it
easier to add it to the GEM_PATH for all versions of ruby to use.
(gem-home): Remove procedure.
* gnu/packages/ruby.scm (ruby, ruby-2.1)[native-search-paths]: Switch to
lib/ruby/vendor_ruby.
(ruby-1.8)[native-search-paths]: Remove native-search-paths.
(gem-directory): Remove procedure.
(ruby-ansi, ruby-ae)[arguments]: Remove use of gem-directory.
(ruby-metaclass, ruby-instantiator, ruby-introspection, ruby-mocha,
ruby-nokogiri, ruby-minitest-tu-shim, ruby-redcloth)[arguments]: Remove use
of gem-home.
(ruby-git, ruby-httpclient)[arguments]: Remove use of GEM_HOME.
* gnu/packages/databases.scm (es-dump-restore)[arguments]: Remove use of
GEM_HOME.
2018-01-14 22:16:08 +00:00
4adb40bffc
Merge branch 'master' into core-updates
2018-01-11 14:22:50 -08:00
3926a099b4
gnu: guile-wiredtiger: Update to 0.6.3.
...
* gnu/package/databases.scm (guile-wiredtiger): Update to 0.6.3.
[arguments]: Enable tests; disable parallel tests; remove
'remove-bundled-dependencies' phase.
[synopsis, description]: Improve them.
Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2018-01-08 12:46:53 -05:00
23de2e1d5f
Merge remote-tracking branch 'origin/master' into core-updates
2017-12-31 14:10:25 +02:00
90205b625e
gnu: Run some tests in the mongodb package check phase.
...
Previously the mongodb dbtests and unittests were only built, and not actually
run.
* gnu/packages/databases.scm (mongodb)[native-inputs]: Add python2-minimal,
python2-pymongo and python2-pyyaml for running the resmoke.py program, and
add tzdata as some tests fail without this.
[arguments]: Run the tests through the resmoke.py script in the check phase,
set TZDIR as a couple of tests seem to depend on this, add a comment about
the resource requirements of the tests, as they require a large amount of
disk space, and disable the async_stream_test, as it seems to hang.
2017-12-27 13:28:34 +00:00
a469c69508
gnu: Build wiredtiger with builtin compressors.
...
WiredTiger is used by MongoDB, and it seems to require it to be built with
builtin support for snappy compression.
* gnu/packages/databases.scm (wiredtiger)[arguments]: Replace --enable-zlib
and --enable-snappy with --with-builtins=snappy,zlib.
2017-12-27 13:28:24 +00:00
53ae35e443
gnu: python-sqlalchemy-utils: Update to 0.32.21.
...
* gnu/packages/databases.scm (python-sqlalchemy-utils): Update to 0.32.21.
2017-12-26 16:44:52 +01:00
bcdc5caed7
gnu: python-sadisplay: Update to 0.4.8.
...
* gnu/packages/databases.scm (python-sadisplay): Update to 0.4.8.
2017-12-26 16:43:57 +01:00
a7f27da7f2
gnu: check, databases: Use HTTPS for bitbucket.org.
...
* gnu/packages/check.scm (python-pytest-capturelog)[home-page]: Likewise.
* gnu/packages/databases.scm (python-alembic)[home-page]: Likewise.
2017-12-26 02:27:42 +01:00
08455a3464
gnu: python-redis: Update to 2.10.6.
...
* gnu/packages/databases.scm (python-redis): Update to 2.10.6.
2017-12-26 02:03:41 +01:00
030274ccac
gnu: python-alembic: Update to 0.9.6.
...
* gnu/packages/databases.scm (python-alembic): Update to 0.9.6.
2017-12-26 02:03:41 +01:00
3faa422d5f
gnu: Build wiredtiger with snappy support.
...
This is probably necessary to get the MongoDB package in Guix to successfully
use the Guix wiredtiger package, as MongoDB it uses wiredtiger with snappy by
default.
* gnu/packages/databases.scm (wiredtiger)[arguments]: Add --enable-snappy to
#:configure-flags.
[inputs]: Add snappy.
2017-12-22 19:23:53 +00:00
0054564b85
gnu: mariadb: Update to 10.1.29.
...
* gnu/packages/databases.scm (mariadb): Update to 10.1.29.
2017-12-22 10:53:50 -05:00
32cd878be0
Merge branch 'master' into core-updates
2017-12-19 01:42:40 +01:00
439980b707
gnu: perl-sql-abstract: Update source uri.
...
* gnu/packages/databases.scm (perl-sql-abstract)[source]: Update source uri.
2017-12-10 11:35:28 +02:00
9e111db453
Merge branch 'master' into core-updates
2017-12-07 18:26:11 +01:00
b10ac21511
gnu: perl-dbd-pg: Update to 3.7.0.
...
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.0
2017-12-07 02:59:24 +01:00
47b059197d
gnu: perl-sql-abstract: Update to 1.84.
...
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.84
2017-12-07 02:59:24 +01:00
b2b995622a
gnu: perl-dbix-class-schema-loader: Update to 0.07047.
...
* gnu/packages/databases.scm (perl-dbix-class-schema-loader): Update to
0.07047
2017-12-07 02:59:17 +01:00
84a0008ae7
gnu: perl-dbi: Update to 1.637.
...
* gnu/packages/databases.scm (perl-dbi): Update to 1.637
2017-12-07 02:57:28 +01:00
77181815ae
Merge branch 'master' into core-updates
2017-12-05 23:41:30 +01:00
6e385b76e6
gnu: mongodb: Use scons-build-system.
...
* gnu/packages/databases.scm (mongodb): Switch to scons-build-system.
2017-11-30 18:21:23 +05:30
51b0f09e05
gnu: mongodb: Remove some bundled sources.
...
* gnu/packages/databases.scm (mongodb)[source]: Add snippet to remove
some of the bundled sources.
[input]: Remove unused boost input.
2017-11-26 14:16:08 +02:00
319b52c382
gnu: mongodb: Use system wiredtiger when available.
...
* gnu/packages/databases.scm (mongodb)[inputs]: Add wiredtiger on
64-bit systems.
[arguments]: When using wiredtiger, use system wiredtiger.
2017-11-26 14:16:08 +02:00
29cfbfca43
gnu: mongodb: Build without wiredtiger on 32-bit systems.
...
* gnu/packages/databases.scm (mongodb)[arguments]: Add a configure-flag
to build without wiredtiger support on 32-bit systems.
2017-11-26 14:16:04 +02:00
f1c49e75f4
gnu: mongodb: Update to 3.4.10.
...
* gnu/packages/databases.scm (mongodb): Update to 3.4.10.
2017-11-25 20:28:11 -05:00
41916bea1b
gnu: Add python-pyodbc.
...
* gnu/packages/databases.scm (python-pyodbc, python2-pyodbc): New variables.
2017-11-20 20:47:59 +01:00
2dd12924cf
Merge branch 'master' into core-updates
2017-11-19 15:01:00 +01:00
a8714bf680
gnu: Move database packages from python.scm to databases.scm.
...
* gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite,
python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils,
python2-sqlalchemy-utils, python-alembic, python2-alembic,
python-pickleshare, python2-pickleshare, python-apsw, python2-apsw,
python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2,
python-sadisplay, python2-sadisplay, python-mysqlclient,
python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis,
python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq,
python-trollius-redis, python2-trollius-redis, python-sqlparse,
python2-sqlparse, python-sql, python2-sql): Move from here...
* gnu/packages/databases.scm: ...to here.
* gnu/packages/tryton.scm,
gnu/packages/python-web.scm,
gnu/packages/nutrition.scm,
gnu/packages/medical.scm: Adjust accordingly.
2017-11-17 22:36:27 +01:00
1697307185
gnu: Add guile-wiredtiger.
...
* gnu/packages/databases.scm (guile-wiredtiger): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-14 23:46:53 +01:00
5ccde2079e
gnu: Move test packages from perl to perl-check.
...
* gnu/packages/perl.scm (perl-test2-bundle-extended,
perl-test2-plugin-nowarnings, perl-test-base, perl-test-class,
perl-test-class-most, perl-test-cleannamespaces, perl-test-command,
perl-test-cpan-meta, perl-test-cpan-meta-json, perl-test-deep,
perl-test-differences, perl-test-directory, perl-test-eol,
perl-test-exception, perl-test-fatal, perl-test-file-sharedir-dist,
perl-test-files, perl-test-harness, perl-test-leaktrace,
perl-test-longstring, perl-test-manifest, perl-test-memory-cycle,
perl-test-mockobject, perl-test-mocktime, perl-test-most, perl-test-needs,
perl-test-notabs, perl-test-nowarnings, perl-test-number-delta,
perl-test-output, perl-test-pod, perl-test-pod-coverage, perl-test-requires,
perl-test-script, perl-test-sharedfork, perl-test-simple, perl-test-taint,
perl-test-tester, perl-test-trap, perl-test-utf8, perl-test-warn,
perl-test-warnings, perl-test-without-module, perl-test-writevariants,
perl-test-yaml, perl-test-trailingspace): Move variables to ...
* gnu/packages/perl-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/glib.scm,
gnu/packages/gnupg.scm,
gnu/packages/image-viewers.scm,
gnu/packages/language.scm,
gnu/packages/networking.scm,
gnu/packages/package-management.scm,
gnu/packages/perl.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/version-control.scm,
gnu/packages/web.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm: Use perl-check module.
2017-11-13 23:03:01 +01:00
179b7ac66d
gnu: postgresql@9.6: Update to 9.6.6 [security fixes].
...
This fixes CVE-2017-12172, CVE-2017-15098, CVE-2017-15099.
* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.6.
2017-11-10 10:24:13 +02:00
1d8e73ba67
gnu: postgresql: Update to 10.1 [security fixes].
...
Fixes CVE-2017-12172, CVE-2017-15098 and CVE-2017-15099.
* gnu/packages/databases.scm (postgresql): Update to 10.1.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-11-10 01:22:53 +01:00
74248d22a0
gnu: Add r-rmysql.
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* gnu/packages/databases.scm (r-rmysql): New variable.
2017-11-07 08:15:43 +01:00
aa70cf8c36
gnu: redis: Update to 4.0.2.
...
* gnu/packages/databases.scm (redis): Update to 4.0.2.
2017-11-05 19:03:32 +01:00
4527a97fac
gnu: sqlite: Update to 3.21.0.
...
* gnu/packages/databases.scm (sqlite): Update to 3.21.0.
2017-11-01 23:35:12 +01:00
eda8a841ac
Merge remote-tracking branch 'origin/python-updates' into core-updates
2017-10-26 12:45:11 +03:00
b7883b111d
Merge branch 'master' into core-updates
2017-10-25 20:02:08 +02:00
6a23c8b183
gnu: Add sqlite-with-fts3.
...
* gnu/packages/databases.scm (sqlite-with-fts3): New variable.
Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>
2017-10-25 15:13:38 +02:00
ca4fd41de8
Merge branch 'master' into core-updates
2017-10-24 22:00:23 +02:00
57af0d13b2
gnu: python-lmdb: Update to 0.93.
...
* gnu/packages/databases.scm (python-lmdb): Update to 0.93.
2017-10-23 14:49:32 +02:00
afd845368a
gnu: python-peewee: Update to 2.10.2.
...
* gnu/packages/databases.scm (python-peewee): Update to 2.10.2.
2017-10-23 14:49:31 +02:00
119a749db9
Merge branch 'master' into core-updates
2017-10-22 20:12:52 +02:00
48f8b07082
gnu: mysql: Update to 5.7.20.
...
* gnu/packages/databases.scm (mysql): Update to 5.7.20.
2017-10-20 15:36:42 -04:00
928da609b5
gnu: Remove python-pytest@2.
...
* gnu/packages/python.scm (python-pytest): Update to 3.0.7.
[source]: Move substitution to ...
[arguments]: ... here. Incorporate phase from pytest-3.0.
[native-inputs]: Add PYTHON-HYPOTHESIS.
(python-pytest-3.0): Remove variable.
(python2-pytest-3.0): Rename to ...
(python2-pytest): ... this.
[native-inputs]: Add PYTHON2-ENUM34.
* gnu/packages/backup.scm (borg)[native-inputs]: Replace PYTHON-PYTEST-3.0
with PYTHON-PYTEST.
* gnu/packages/calendar.scm (khal): Likewise.
* gnu/packages/databases.scm (python-orator): Likewise.
* gnu/packages/python.scm (python-sphinx-1.6, python-sphinx-1.5.3,
python-pexpect, python-cryptography, python-pyopenssl, python-pytest-warnings,
python-pytest-capturelog, python-pytest-catchlog, python-marshmallow,
python-apispec, python-flasgger, python-pyjwt, python-grako,
python-honcho): Likewise.
* gnu/packages/web.scm (python-internetarchive): Likewise.
2017-10-19 00:16:49 +02:00
8cff2e7aed
Merge 'master' into core-updates
2017-10-16 19:52:30 +02:00
7658d89bb7
gnu: Add postgresql@9.6.
...
* gnu/packages/databases.scm (postgresql@9.6): New variable.
2017-10-12 23:39:35 +03:00
c01ef97594
Merge branch 'master' into core-updates
2017-10-10 22:33:28 +02:00
1c055d7258
Merge branch 'staging'
2017-10-10 21:44:32 +02:00
231123ee16
gnu: postgresql: Update to 10.0.
...
* gnu/packages/databases.scm (postgresql): Update to 10.0.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-10-10 10:33:26 -04:00
ad3a937dae
Merge branch 'master' into staging
2017-10-07 12:54:40 +02:00
6bbbca9073
gnu: Add mongodb.
...
* gnu/packages/databases.scm (mongodb): New variable.
2017-10-06 21:24:23 +01:00
7716ccd59c
Merge branch 'master' into staging
2017-10-05 00:45:38 +02:00
48b68c6178
gnu: virtuoso-ose: Limit to 64-bit platforms.
...
* gnu/packages/databases.scm (virtuoso-ose)[supported-systems]: New field.
2017-10-04 10:51:19 +03:00
61ce0998e0
gnu: Add virtuoso-ose.
...
* gnu/packages/databases.scm (virtuoso-ose): New variable.
2017-10-03 15:36:05 +02:00
64df08f0cf
Merge remote-tracking branch 'origin/master' into core-updates
2017-10-01 22:16:22 +03:00
afcbb02057
gnu: Add ruby-es-dump-restore.
...
* gnu/packages/databases.scm (es-dump-restore): New variable.
2017-09-30 11:46:10 +01:00
595dcd48a9
gnu: bdb: Update to 6.2.32.
...
* gnu/packages/databases.scm (bdb): Update to 6.2.32.
2017-09-21 20:33:56 +02:00
dc1d3cdef7
gnu: Use 'modify-phases' syntax.
...
* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal,
wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use
'modify-phases' syntax.
* gnu/packages/algebra.scm (arb)[arguments]: Likewise.
* gnu/packages/apr.scm (apr-util)[arguments]: Likewise.
* gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano,
lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound,
zita-convolver, zita-alsa-pcmi)[arguments]: Likewise.
* gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express,
flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise.
* gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise.
* gnu/packages/compression.scm (sharutils)[arguments]: Likewise.
* gnu/packages/conky.scm (conky)[arguments]: Likewise.
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise.
* gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise.
* gnu/packages/display-managers.scm (slim)[arguments]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise.
* gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise.
* gnu/packages/engineering.scm (pcb)[arguments]: Likewise.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise.
* gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise.
* gnu/packages/fltk.scm (fltk)[arguments]: Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise.
* gnu/packages/gd.scm (perl-gd)[arguments]: Likewise.
* gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise.
* gnu/packages/glib.scm (glibmm)[arguments]: Likewise.
* gnu/packages/gl.scm (glew)[arguments]: Likewise.
* gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs,
libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise.
* gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise.
* gnu/packages/graphics.scm (agg)[arguments]: Likewise.
* gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present,
python2-pycairo)[arguments]: Likewise.
* gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise.
* gnu/packages/hugs.scm (hugs)[arguments]: Likewise.
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal)
[arguments]: Likewise.
* gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise.
* gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static,
lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools)
[arguments]: Likewise.
* gnu/packages/lisp.scm (ccl)[arguments]: Likewise.
* gnu/packages/lout.scm (lout)[arguments]: Likewise.
* gnu/packages/lua.scm (luajit)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise.
* gnu/packages/mail.scm (exim)[arguments]: Likewise.
* gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise.
* gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun)
[arguments]: Likewise.
* gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise.
* gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise.
* gnu/packages/music.scm (solfege)[arguments]: Likewise.
* gnu/packages/noweb.scm (noweb)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]:
Likewise.
* gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise.
* gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]:
Likewise.
* gnu/packages/photo.scm (gphoto2)[arguments]: Likewise.
* gnu/packages/popt.scm (popt)[arguments]: Likewise.
* gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]:
Likewise.
* gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise.
* gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy,
python-sqlalchemy, python-docopt)[arguments]: Likewise.
* gnu/packages/rdf.scm (lrdf)[arguments]: Likewise.
* gnu/packages/regex.scm (tre)[arguments]: Likewise.
* gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise.
* gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise.
* gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise.
* gnu/packages/scheme.scm (racket)[arguments]: Likewise.
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise.
* gnu/packages/serveez.scm (serveez)[arguments]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise.
* gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise.
* gnu/packages/tcl.scm (expect)[arguments]: Likewise.
* gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise.
* gnu/packages/textutils.scm (recode, libgtextutils)[arguments]:
Likewise.
* gnu/packages/time.scm (time)[arguments]: Likewise.
* gnu/packages/tor.scm (privoxy)[arguments]: Likewise.
* gnu/packages/uucp.scm (uucp)[arguments]: Likewise.
* gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise.
* gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
* gnu/packages/wicd.scm (wicd)[arguments]: Likewise.
* gnu/packages/wm.scm (bspwm)[arguments]: Likewise.
* gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise.
* gnu/packages/xfce.scm (xfconf)[arguments]: Likewise.
* gnu/packages/xfig.scm (transfig)[arguments]: Likewise.
* gnu/packages/xorg.scm (imake)[arguments]: Likewise.
2017-09-20 20:58:04 -04:00
da1f7a9e16
gnu: python-orator: Move to (gnu packages databases).
...
* gnu/packages/python.scm: Remove (gnu packages time) import.
(python-orator, python2-orator): Move from here ...
* gnu/packages/databases.scm: ... to here.
2017-09-17 11:07:46 +10:00
accf6c6acc
gnu: sqlite: Update to 3.20.1.
...
* gnu/packages/databases.scm (sqlite): Update to 3.20.1.
2017-09-11 16:29:50 +02:00
d10092b849
gnu: Put autoconf-related phases immediately after the 'unpack phase.
...
* gnu/packages/audio.scm (audacity, rtmidi)[arguments]: Correct phases
accordingly.
* gnu/packages/bioinformatics.scm (mash, seek, vsearch, emboss,
htslib-for-sambamba)[arguments]: Likewise.
* gnu/packages/ci.scm (cuirass)[arguments]: Likewise.
* gnu/packages/compression.scm (minizip, xdelta)[arguments]: Likewise.
* gnu/packages/cpp.scm (libzen)[arguments]: Likewise.
* gnu/packages/crypto.scm (opendht)[arguments]: Likewise.
* gnu/packages/databases.scm (4store, mdbtools)[arguments]: Likewise.
* gnu/packages/debug.scm (stress-make)[arguments]: Likewise.
* gnu/packages/dns.scm (dnscrypt-proxy, dnscrypt-wrapper)[arguments]:
Likewise.
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[arguments]: Likewise.
* gnu/packages/engineering.scm (gerbv)[arguments]: Likewise.
* gnu/packages/erlang.scm (erlang)[arguments]: Likewise.
* gnu/packages/ftp.scm (weex)[arguments]: Likewise.
* gnu/packages/gnome.scm (dia)[arguments]: Likewise.
* gnu/packages/gnunet.scm (gnurl, guile-gnunet)[arguments]: Likewise.
* gnu/packages/gtk.scm (guile-rsvg, graphene)[arguments]: Likewise.
* gnu/packages/guile.scm (guildhall, guile-ics, guile-sqlite3)[arguments]:
Likewise.
* gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Likewise.
* gnu/packages/irc.scm (weechat)[arguments]: Likewise.
* gnu/packages/java.scm (classpath-devel)[arguments]: Likewise.
* gnu/packages/libreoffice.scm (libetonyek)[arguments]: Likewise.
* gnu/packages/libusb.scm (hidapi)[arguments]: Likewise.
* gnu/packages/linux.scm (gpm)[arguments]: Likewise.
* gnu/packages/logging.scm (glog)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Likewise.
* gnu/packages/mail.scm (dovecot-trees, dovecot-libsodium-plugin, esmtp)
[arguments]: Likewise.
* gnu/packages/messaging.scm (freetalk, libmesode, libstrophe)[arguments]:
Likewise.
* gnu/packages/microcom.scm (microcom)[arguments]: Likewise.
* gnu/packages/ocaml.scm (ocaml-ssl)[arguments]: Likewise.
* gnu/packages/parallel.scm (slurm)[arguments]: Likewise.
* gnu/packages/pdf.scm (libharu)[arguments]: Likewise.
* gnu/packages/samba.scm (cifs-utils)[arguments]: Likewise.
* gnu/packages/serialization.scm (msgpack)[arguments]: Likewise.
* gnu/packages/shells.scm (scsh)[arguments]: Likewise.
* gnu/packages/telephony.scm (libiax2)[arguments]: Likewise.
* gnu/packages/textutils.scm (dotconf)[arguments]: Likewise.
* gnu/packages/version-control.scm (findnewest)[arguments]: Likewise.
* gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Likewise.
2017-09-04 00:10:59 -04:00
7d099cbe13
gnu: mysql: Enable tests on aarch64.
...
* gnu/packages/databases.scm (mysql)[arguments]: Remove logic disabling
the tests on aarch64-linux.
2017-09-01 10:50:39 +03:00
ff54f194f3
gnu: postgresql: Update to 9.6.5.
...
* gnu/packages/databases.scm (postgresql): Update to 9.6.5.
Release-notes: https://www.postgresql.org/docs/9.6/static/release-9-6-5.html
2017-08-31 21:34:20 +02:00
Tobias Geerinckx-Rice