6b12f21363
gnu: Add r-webbioc.
...
* gnu/packages/bioconductor.scm (r-webbioc): New variable.
2019-04-03 17:42:18 +02:00
7b5101c5bf
gnu: Add r-widgettools.
...
* gnu/packages/bioconductor.scm (r-widgettools): New variable.
2019-04-03 17:42:17 +02:00
b9b8b447ec
gnu: Add r-wiggleplotr.
...
* gnu/packages/bioconductor.scm (r-wiggleplotr): New variable.
2019-04-03 17:42:17 +02:00
8830664d61
gnu: Add r-wrench.
...
* gnu/packages/bioconductor.scm (r-wrench): New variable.
2019-04-03 17:42:17 +02:00
807900804d
gnu: gnu-mate-icon-theme-faenza: Update to 1.20.0.
...
* gnu/packages/mate.scm (gnu-mate-icon-theme-faenza): Update to 1.20.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:10 +02:00
1e4999de71
gnu: mate-polkit: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-polkit): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:10 +02:00
4e5b1221e7
gnu: mate-system-monitor: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-system-monitor): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:08 +02:00
b3dcbc0408
gnu: pluma: Update to 1.22.0.
...
* gnu/packages/mate.scm (pluma): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:08 +02:00
56689aa5fb
gnu: engrampa: Update to 1.22.0.
...
* gnu/packages/mate.scm (engrampa): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:08 +02:00
b85d568203
gnu: eom: Update to 1.22.0.
...
* gnu/packages/mate.scm (eom): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:08 +02:00
24eee2c025
gnu: mate-utils: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-utils): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:08 +02:00
d3440c5313
gnu: mate-screensaver: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-screensaver): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:07 +02:00
5150ba6f17
gnu: mate-netbook: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-netbook): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:07 +02:00
9c688deccc
gnu: backgrounds: Update to 1.22.0.
...
* gnu/packages/mate.scm (backgrounds): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:07 +02:00
d96a83b883
gnu: mate-calc: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-calc): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:07 +02:00
59c410dd3e
gnu: mate-user-guide: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-user-guide): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:07 +02:00
0e4c492d4d
gnu: mate-control-center: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-control-center): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:05 +02:00
4373626b5a
gnu: caja-extensions: Update to 1.22.0.
...
* gnu/packages/mate.scm (caja-extensions): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:05 +02:00
98b81c2e9e
gnu: atril: Update to 1.22.0.
...
* gnu/packages/mate.scm (atril): Update to 1.22.0.
[arguments]<#:configure-flags>: Remove pre-GTK3 option.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:04 +02:00
cca6216bfc
gnu: marco: Update to 1.22.0.
...
* gnu/packages/mate.scm (marco): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:04 +02:00
296c42b9e8
gnu: caja: Update to 1.22.0.
...
* gnu/packages/mate.scm (caja): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:04 +02:00
da5ef2a085
gnu: mate-media: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-media): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:04 +02:00
75a9f76066
gnu: mate-applets: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-applets): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:04 +02:00
e568d8339b
gnu: mate-panel: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-panel): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:04 +02:00
45bafe5501
gnu: mate-menus: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-menus): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:03 +02:00
a628389fa9
gnu: libmatekbd: Update to 1.22.0.
...
* gnu/packages/mate.scm (libmatekbd): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:03 +02:00
660aa5d9f8
gnu: libmatemixer: Update to 1.22.0.
...
* gnu/packages/mate.scm (libmatemixer): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:00 +02:00
541dfa45da
gnu: mate-settings-daemon: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-settings-daemon): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:00 +02:00
bc96f8c4a7
gnu: mate-session-manager: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-session-manager): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:26:00 +02:00
27d4e820d1
gnu: mate-terminal: Update to 1.22.0
...
* gnu/packages/mate.scm (mate-terminal): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:25:59 +02:00
595abe8688
gnu: libmatewether: Update to 1.22.0.
...
* gnu/packages/mate.scm (libmatewether): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:25:59 +02:00
2dc975d7c0
gnu: mate-desktop: Update to 1.22.2.
...
* gnu/packages/mate.scm (mate-desktop): Update to 1.22.0.
[inputs]: Add iso-codes.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:25:59 +02:00
b465500686
gnu: mate-themes: Update to 3.22.19.
...
* gnu/packages/mate.scm (mate-themes): Update to 3.22.19.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:25:59 +02:00
80e8305146
gnu: mate-icon-theme: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-icon-theme): Update to 1.20.3.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:25:59 +02:00
8b493c7cf0
gnu: mate-common: Update to 1.22.0.
...
* gnu/packages/mate.scm (mate-common): Update to 1.22.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-03 15:25:57 +02:00
44e06f9cf3
gnu: Add brlaser.
...
* gnu/packages/printers.scm (brlaser): New variable.
2019-04-02 22:04:08 +02:00
932d6e276b
gnu: wxmaxima: Update to 19.03.1.
...
* gnu/packages/maths.scm (wxmaxima): Update to 19.03.1.
2019-04-02 14:45:22 -04:00
a6f9f18c7e
gnu: livemedia-utils: Update to 2019.03.06.
...
* gnu/packages/video.scm (livemedia-utils): Update to 2019-03-06.
[source]: Remove snippet.
2019-04-02 14:44:14 -04:00
295197500f
gnu: Syncthing: Update to 1.1.1.
...
* gnu/packages/syncthing.scm (syncthing): Update to 1.1.1.
2019-04-02 13:07:03 -04:00
9c1b4316dc
gnu: Go standard crypto library: Update to 0.0.0-3.b7391e9 [security fixes].
...
Fixes a vulnerability in 'golang.org/x/crypto/salsa20' where, if more than 256
GiB of keystream is generated, or if the counter otherwise grows greater than 32
bits, the amd64 implementation will first generate incorrect output, and then
cycle back to previously generated keystream.
https://go.googlesource.com/crypto/+/b7391e95e576cacdcdd422573063bc057239113d
* gnu/packages/golang.scm (go-golang-org-x-crypto-bcrypt,
go-golang-org-x-crypto-blowfish, go-golang-org-x-crypto-pbkdf2,
go-golang-org-x-crypto-tea, go-golang-org-x-crypto-salsa20,
go-golang-org-x-crypto-cast5, go-golang-org-x-crypto-twofish,
go-golang-org-x-crypto-xtea, go-golang-org-x-crypto-ed25519,
go-golang-org-x-crypto-ripemd160, go-golang-org-x-crypto-blake2s,
go-golang-org-x-crypto-sha3, go-golang-org-x-crypto-ssh-terminal): Update to
0.0.0-3.b7391e9.
(go-golang-org-x-crypto-blake2s)[propagated-inputs]: Add
go-golang-org-x-sys-cpu.
(go-golang-org-x-crypto-blowfish, go-golang-org-x-crypto-pbkdf2,
go-golang-org-x-crypto-tea, go-golang-org-x-crypto-salsa20,
go-golang-org-x-crypto-cast5, go-golang-org-x-crypto-twofish,
go-golang-org-x-crypto-xtea, go-golang-org-x-crypto-ssh-terminal):
Inherit from go-golang-org-x-crypto-bcrypt.
2019-04-02 13:07:03 -04:00
4a136536e8
gnu: Add go-golang-org-x-sys-cpu.
...
* gnu/packages/golang.scm (go-golang-org-x-sys-cpu): New variable.
2019-04-02 13:07:03 -04:00
af76c020bf
linux-container: Make the guest UID and GID a parameter.
...
* gnu/build/linux-container.scm (initialize-user-namespace): Add
#:guest-uid and #:guest-gid parameters and honor them.
(run-container): Likewise.
(call-with-container): Likewise.
* tests/containers.scm ("call-with-container, user namespace, guest UID/GID"):
New test.
2019-04-02 18:15:37 +02:00
cbe40b8b24
gnu: pigx-scrnaseq: Use older loompy.
...
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace
python-loompy with python-loompy-for-pigx-scrnaseq.
2019-04-02 16:11:23 +02:00
dc112a0fe2
gnu: Add python-loompy-for-pigx-scrnaseq.
...
* gnu/packages/bioinformatics.scm (python-loompy-for-pigx-scrnaseq): New variable.
2019-04-02 16:11:12 +02:00
82cc117450
gnu: pigx-chipseq: Update to 0.0.40.
...
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.40.
2019-04-02 15:53:23 +02:00
b4a33870f6
gnu: python-scanpy: Add python-louvain to inputs.
...
* gnu/packages/bioinformatics.scm (python-scanpy)[propagated-inputs]: Sort
inputs and add python-louvain.
[arguments]: Do not delete test that depends on louvain.
2019-04-02 15:11:45 +02:00
6ee48091a4
gnu: Add python-louvain.
...
* gnu/packages/graph.scm (python-louvain): New variable.
2019-04-02 15:11:45 +02:00
ba907ae362
gnu: faudio: Update to 19.04.
...
* gnu/packages/audio.scm (faudio): Update to 19.04.
2019-04-02 11:30:05 +02:00
c97ad2fd8b
gnu: Add emacs-evil-numbers.
...
* gnu/packages/emacs-xyz.scm (emacs-evil-numbers): New variable.
2019-04-02 10:55:07 +02:00
d6fda4d3d1
gnu: gnome-shell: Add dependency on libgnomekbd.
...
This fixes the "Show keyboard layout" button in the keyboard layout
switcher.
* gnu/packages/gnome.scm (gnome-shell)[arguments]: In
'record-absolute-file-names' phase, record file name of
'gkbd-keyboard-display'.
[inputs]: Add LIBGNOMEKBD.
2019-04-01 23:21:02 +02:00
Ricardo Wurmus