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42096 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice f86d56a7af
gnu: terraform-docs: Update to 0.6.0. 
* gnu/packages/terraform.scm (terraform-docs): Update to 0.6.0.
 2019-03-21 04:06:57 +01:00
Maxim Cournoyer 2f33a7321e
cmake: Generate documentation. 
To prevent complicating the dependencies of a core tool, a new variant,
CMAKE-MINIMAL is introduced and the CMake build system is configured to use it
by default.  The regular CMAKE package gains a manpage, info manual as well
as HTML documentation.

Fixes issue #33497 (https://bugs.gnu.org/33497).

* gnu/packages/cmake.scm (gnu): Use modules (gnu packages python-xyz),
(gnu packages texinfo) and (srfi srfi-1).
(cmake-minimal): Rename the original cmake variable to this.
[phases]{configure}: Extract the configure script arguments to...
[configure-flags]: here.
[properties]: Set the HIDDEN? property to #t.
(cmake): New variable, which inherits from CMAKE-MINIMAL.
[phases]{move-html-doc}: Add phase.
[native-inputs]: Add PYTHON-SPHINX and TEXINFO.
[outputs]: Add the "doc" output.
[properties]: Clear the inherited HIDDEN? property.
* guix/build-system/cmake.scm (default-cmake): Use CMAKE-MINIMAL instead of
CMAKE.
 2019-03-20 21:38:19 -04:00
Ricardo Wurmus 6cea61ebb5
gnu: r-spam: Update to 2.2-2. 
* gnu/packages/cran.scm (r-spam): Update to 2.2-2.
 2019-03-21 00:02:52 +01:00
Ricardo Wurmus a7524f7000
gnu: r-sjstats: Update to 0.17.4. 
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.4.
[propagated-inputs]: Remove r-bayesplot, r-coin, r-crayon, r-glmmtmb, r-nlme,
and r-pwr; add r-insight.
 2019-03-21 00:02:52 +01:00
Ricardo Wurmus 9d047572c8
gnu: r-gsl: Update to 2.1-5. 
* gnu/packages/cran.scm (r-gsl): Update to 2.1-5.
 2019-03-21 00:02:52 +01:00
Ricardo Wurmus f69ba00f09
gnu: r-coin: Update to 1.3-0. 
* gnu/packages/cran.scm (r-coin): Update to 1.3-0.
[propagated-inputs]: Add r-libcoin and r-matrixstats.
 2019-03-21 00:02:52 +01:00
Ricardo Wurmus c9ba1155a2
gnu: r-fs: Update to 1.2.7. 
* gnu/packages/cran.scm (r-fs): Update to 1.2.7.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus fef93da89d
gnu: r-ggeffects: Update to 0.9.0. 
* gnu/packages/cran.scm (r-ggeffects): Update to 0.9.0.
[propagated-inputs]: Remove r-crayon, r-ggplot2, r-lme4, r-prediction,
r-sjstats, r-tidyr; add r-insight.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus a3daf011cc
gnu: r-proc: Update to 1.14.0. 
* gnu/packages/cran.scm (r-proc): Update to 1.14.0.
[propagated-inputs]: Remove r-ggplot2.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 20b375ecd8
gnu: r-huge: Update to 1.3.1. 
* gnu/packages/cran.scm (r-huge): Update to 1.3.1.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 8aef1ea6fd
gnu: r-rgl: Update to 0.100.19. 
* gnu/packages/cran.scm (r-rgl): Update to 0.100.19.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 37317189a7
gnu: r-argparse: Update to 2.0.1. 
* gnu/packages/cran.scm (r-argparse): Update to 2.0.1.
[propagated-inputs]: Remove r-getopt.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus fcb8456577
gnu: r-findpython: Update to 1.0.5. 
* gnu/packages/cran.scm (r-findpython): Update to 1.0.5.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 31af2e7f92
gnu: r-sjmisc: Update to 2.7.9. 
* gnu/packages/cran.scm (r-sjmisc): Update to 2.7.9.
[propagated-inputs]: Remove r-broom, r-crayon, r-stringdist, r-stringr, and
r-tidyr.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 1adcbeda5f
gnu: r-ncdf4: Update to 1.16.1. 
* gnu/packages/cran.scm (r-ncdf4): Update to 1.16.1.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 5e16dff99c
gnu: r-sjlabelled: Update to 1.0.17. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.0.17.
[propagated-inputs]: Remove r-broom, r-prediction, and r-snakecase; add
r-insight.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 83bfddd1b0
gnu: r-gmp: Update to 0.5-13.5. 
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.5.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus ae7e6f0620
gnu: r-mcmc: Update to 0.9-6. 
* gnu/packages/cran.scm (r-mcmc): Update to 0.9-6.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 7e6c5ebbea
gnu: r-gamlss-dist: Update to 5.1-3. 
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.1-3.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 1a38c31456
gnu: r-future: Update to 1.12.0. 
* gnu/packages/cran.scm (r-future): Update to 1.12.0.
 2019-03-21 00:02:51 +01:00
Ricardo Wurmus 5ccf16c746
gnu: r-msir: Update to 1.3.2. 
* gnu/packages/cran.scm (r-msir): Update to 1.3.2.
[propagated-inputs]: Remove r-rgl.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus fc82a8f577
gnu: r-e1071: Update to 1.7-1. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 6720b37810
gnu: r-purrr: Update to 0.3.2. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.2.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 08859c8d27
gnu: r-mclust: Update to 5.4.3. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.3.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus c17ee12cf7
gnu: r-robustbase: Update to 0.93-4. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-4.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus e469e10e20
gnu: r-zip: Update to 2.0.1. 
* gnu/packages/cran.scm (r-zip): Update to 2.0.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 35fe7882a8
gnu: r-tinytex: Update to 0.11. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.11.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 76cbfb5ad5
gnu: r-processx: Update to 3.3.0. 
* gnu/packages/cran.scm (r-processx): Update to 3.3.0.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 78e2973827
gnu: r-cli: Update to 1.1.0. 
* gnu/packages/cran.scm (r-cli): Update to 1.1.0.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 5275f9d7f9
gnu: r-ordinal: Update to 2019.3-9. 
* gnu/packages/cran.scm (r-ordinal): Update to 2019.3-9.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 739135b2be
gnu: r-lmoments: Update to 1.3-1. 
* gnu/packages/cran.scm (r-lmoments): Update to 1.3-1.
[propagated-inputs]: Add r-rcpp and r-rcpparmadillo.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 06070c0397
gnu: r-rcpp: Update to 1.0.1. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus b21eb34776
gnu: r-glue: Update to 1.3.1. 
* gnu/packages/cran.scm (r-glue): Update to 1.3.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus f9bc918b81
gnu: r-colorspace: Update to 1.4-1. 
* gnu/packages/cran.scm (r-colorspace): Update to 1.4-1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 50d063b511
gnu: r-readxl: Update to 1.3.1. 
* gnu/packages/cran.scm (r-readxl): Update to 1.3.1.
 2019-03-21 00:02:50 +01:00
Ricardo Wurmus 1d7049335f
gnu: r-rmarkdown: Update to 1.12. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.12.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 33fba4cea8
gnu: r-rcpparmadillo: Update to 0.9.200.7.1. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.7.1.
[native-inputs]: Add ghc-pandoc, ghc-pandoc-citeproc, and r-rmarkdown.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 2391e97c4d
gnu: r-httpuv: Update to 1.5.0. 
* gnu/packages/cran.scm (r-httpuv): Update to 1.5.0.
[native-inputs]: Remove pkg-config; move r-rcpp from here...
[propagated-inputs]: ...to here; add r-r6.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus c2b45ac578
gnu: r-diversitree: Update to 0.9-11. 
* gnu/packages/bioinformatics.scm (r-diversitree): Update to 0.9-11.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 1081e8266f
gnu: r-rstudioapi: Update to 0.10. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.10.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 086ca4deae
gnu: r-git2r: Update to 0.25.2. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.25.2.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 7590441976
gnu: r-tibble: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-tibble): Update to 2.1.1.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 86c8b2f5f5
gnu: r-knitr: Update to 1.22. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.22.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus b6c5b0aca2
gnu: r-highr: Update to 0.8. 
* gnu/packages/statistics.scm (r-highr): Update to 0.8.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 1f2862b1be
gnu: r-lazyeval: Update to 0.2.2. 
* gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.2.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus a9c8127290
gnu: r-stringi: Update to 1.4.3. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.4.3.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 2bf224d0ca
gnu: r-permute: Update to 0.9-5. 
* gnu/packages/statistics.scm (r-permute): Update to 0.9-5.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 35663627fb
gnu: r-matrix: Update to 1.2-16. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-16.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 95bf4508e5
gnu: qtractor: Update to 0.9.6. 
* gnu/packages/music.scm (qtractor): Update to 0.9.6.
 2019-03-21 00:02:49 +01:00
Ricardo Wurmus 8e91ad0b5c
gnu: r-ape: Update to 5.3. 
* gnu/packages/cran.scm (r-ape): Update to 5.3.
 2019-03-21 00:02:49 +01:00