6e1f8d552b
Merge branch 'master' into staging
2019-06-29 23:23:59 +02:00
8e92d5465f
gnu: nginx: Update to 1.17.1.
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* gnu/packages/web.scm (nginx): Update to 1.17.1.
2019-06-29 23:17:13 +02:00
55d1d9eb2f
gnu: gstreamer: Fix buffer offset problem.
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* gnu/packages/patches/gstreamer-buffer-reset-offset.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gstreamer)[source](patches): New field.
[arguments]: Do not disable any tests.
2019-06-29 23:17:13 +02:00
bdb51ed6d1
gnu: stow: Update license information.
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* gnu/packages/package-management.scm (stow)[license]: Update to gpl3+.
2019-06-29 21:18:50 +03:00
3a8bfebed9
etc: Remove hydra.gnu.org.pub key.
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* etc/substitutes/hydra.gnu.org.pub: Delete file.
* guix/self.scm (miscellaneous-files): Don't install it.
* Makefile.am (dist_pkgdata_DATA): Remove it.
* gnu/services/base.scm (%default-authorized-guix-keys): Likewise.
(hydra-key-authorization): Rename to…
(substitute-key-authorization): …this. Adjust only call site.
2019-06-29 14:27:22 +02:00
a3efe269b5
gnu: flashrom: Update to 1.1.
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* gnu/packages/flashing-tools.scm (flashrom): Update to 1.1.
2019-06-29 06:28:50 +02:00
ad9baf38ce
gnu: di: Update to 4.47.1.
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* gnu/packages/admin.scm (di): Update to 4.47.1.
2019-06-29 06:28:50 +02:00
30833b1397
gnu: stow: Update to 2.3.0.
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* gnu/packages/package-management.scm (stow): Update to 2.3.0.
[propagated-inputs]: New field.
2019-06-28 22:49:21 -05:00
d1555f34c0
gnu: Add Perl Clone::Choose.
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* gnu/packages/perl.scm (perl-clone-choose): New variable.
2019-06-28 22:44:59 -05:00
f5de2b9a3e
gnu: rust: use llvm@8
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* gnu/packages/llvm.scm (llvm): Rename to...
(llvm-8): ...this.
(llvm): New variable.
* gnu/packages/rust.scm (rust)[inputs]: Use llvm-8
2019-06-28 18:31:51 -07:00
f676b2a45f
gnu: rust: downgrade older versions to llvm@6
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* gnu/packages/rust.scm: (rust-1.30): Remove llvm override.
2019-06-28 18:31:51 -07:00
f309420b2d
gnu: rust: remove debug-info patch thanks to newer gdb version
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* gnu/local.mk: (dist_patch_DATA): Delete
%D%/packages/patches/rust-1.30-gdb-llvm.patch
* gnu/packages/rust.scm: (rust-1.30): Delete patch overrides.
(rust-1.31): Delete patch overrides.
2019-06-28 18:31:47 -07:00
3d0c9ff83e
gnu: r-quantreg: Update to 5.41.
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* gnu/packages/statistics.scm (r-quantreg): Update to 5.41.
2019-06-29 01:34:45 +02:00
73a29d39b3
gnu: r-fpc: Update to 2.2-3.
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* gnu/packages/statistics.scm (r-fpc): Update to 2.2-3.
[propagated-inputs]: Remove r-mvtnorm.
2019-06-29 01:34:45 +02:00
666a5a649c
gnu: r-mclust: Update to 5.4.4.
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* gnu/packages/statistics.scm (r-mclust): Update to 5.4.4.
2019-06-29 01:34:45 +02:00
fad641716e
gnu: r-mvtnorm: Update to 1.0-11.
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* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-11.
2019-06-29 01:34:45 +02:00
30f7acdb6b
gnu: r-segmented: Update to 1.0-0.
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* gnu/packages/statistics.scm (r-segmented): Update to 1.0-0.
2019-06-29 01:34:45 +02:00
5eddf1e291
gnu: r-plotrix: Update to 3.7-6.
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* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-6.
2019-06-29 01:34:45 +02:00
0b17f1d1dd
gnu: r-dbplyr: Update to 1.4.2.
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* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.2.
2019-06-29 01:34:45 +02:00
ef558bcfc5
gnu: r-rlang: Update to 0.4.0.
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* gnu/packages/statistics.scm (r-rlang): Update to 0.4.0.
2019-06-29 01:34:45 +02:00
45ad3fa9e1
gnu: r-gdtools: Update to 0.1.9.
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* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.9.
2019-06-29 01:34:45 +02:00
2c4b38002e
gnu: r-cluster: Update to 2.1.0.
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* gnu/packages/statistics.scm (r-cluster): Update to 2.1.0.
2019-06-29 01:34:44 +02:00
d42fb7d293
gnu: r-future-apply: Update to 1.3.0.
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* gnu/packages/cran.scm (r-future-apply): Update to 1.3.0.
2019-06-29 01:34:44 +02:00
36ff60f539
gnu: r-bootstrap: Update to 2019.6.
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* gnu/packages/cran.scm (r-bootstrap): Update to 2019.6.
2019-06-29 01:34:44 +02:00
93e72161ae
gnu: r-rnifti: Update to 0.11.0.
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* gnu/packages/cran.scm (r-rnifti): Update to 0.11.0.
2019-06-29 01:34:44 +02:00
9f84c9e843
gnu: r-rgl: Update to 0.100.24.
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* gnu/packages/cran.scm (r-rgl): Update to 0.100.24.
2019-06-29 01:34:44 +02:00
da4754a3b1
gnu: r-remotes: Update to 2.1.0.
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* gnu/packages/cran.scm (r-remotes): Update to 2.1.0.
2019-06-29 01:34:44 +02:00
a634a76a06
gnu: r-bayestestr: Update to 0.2.2.
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* gnu/packages/cran.scm (r-bayestestr): Update to 0.2.2.
2019-06-29 01:34:44 +02:00
992e03d209
gnu: r-emmeans: Update to 1.3.5.1.
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* gnu/packages/cran.scm (r-emmeans): Update to 1.3.5.1.
2019-06-29 01:34:44 +02:00
56ab7acb96
gnu: r-ggstance: Update to 0.3.2.
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* gnu/packages/cran.scm (r-ggstance): Update to 0.3.2.
2019-06-29 01:34:44 +02:00
c46a16407b
gnu: r-flextable: Update to 0.5.5.
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* gnu/packages/cran.scm (r-flextable): Update to 0.5.5.
2019-06-29 01:34:44 +02:00
36c5f86fab
gnu: r-sjmisc: Update to 2.8.1.
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* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.1.
2019-06-29 01:34:44 +02:00
c3447a92ee
gnu: r-prediction: Update to 0.3.14.
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* gnu/packages/cran.scm (r-prediction): Update to 0.3.14.
2019-06-29 01:34:44 +02:00
0d2e266220
gnu: r-officer: Update to 0.3.5.
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* gnu/packages/cran.scm (r-officer): Update to 0.3.5.
2019-06-29 01:34:44 +02:00
0ccb34584c
gnu: r-ggpubr: Update to 0.2.1.
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* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.1.
2019-06-29 01:34:43 +02:00
a4bc73b236
gnu: r-ellipsis: Update to 0.2.0.
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* gnu/packages/cran.scm (r-ellipsis): Update to 0.2.0.
[propagated-inputs]: Add r-rlang.
2019-06-29 01:34:43 +02:00
dacf52e0a3
gnu: r-cgdsr: Update to 1.3.0.
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* gnu/packages/cran.scm (r-cgdsr): Update to 1.3.0.
[propagated-inputs]: Add r-httr.
2019-06-29 01:34:43 +02:00
22b2d8b97f
gnu: r-quantmod: Update to 0.4-15.
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* gnu/packages/cran.scm (r-quantmod): Update to 0.4-15.
2019-06-29 01:34:43 +02:00
f5ec882390
gnu: r-tinytex: Update to 0.14.
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* gnu/packages/cran.scm (r-tinytex): Update to 0.14.
2019-06-29 01:34:43 +02:00
db794146ac
gnu: r-xfun: Update to 0.8.
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* gnu/packages/cran.scm (r-xfun): Update to 0.8.
2019-06-29 01:34:43 +02:00
1f7e8d49c3
gnu: r-performanceanalytics: Update to 1.5.3.
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* gnu/packages/cran.scm (r-performanceanalytics): Update to 1.5.3.
2019-06-29 01:34:43 +02:00
4ae5f18a25
gnu: r-abbyyr: Update to 0.5.5.
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* gnu/packages/cran.scm (r-abbyyr): Update to 0.5.5.
2019-06-29 01:34:43 +02:00
5b86bcfa68
gnu: r-phangorn: Update to 2.5.5.
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* gnu/packages/bioinformatics.scm (r-phangorn): Update to 2.5.5.
2019-06-29 01:34:43 +02:00
7f17e60ab7
gnu: r-tximport: Update to 1.12.3.
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* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.3.
2019-06-29 01:34:43 +02:00
dafd290d21
gnu: r-genomicfeatures: Update to 1.36.3.
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* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.3.
2019-06-29 01:34:43 +02:00
c40bba2b36
gnu: r-genomicalignments: Update to 1.20.1.
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* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.1.
2019-06-29 01:34:43 +02:00
888085c36c
gnu: r-biomart: Update to 2.40.1.
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* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.1.
2019-06-29 01:34:43 +02:00
f0c244229a
gnu: r-edger: Update to 3.26.5.
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* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.5.
2019-06-29 01:34:43 +02:00
0253b5d881
gnu: r-systempiper: Update to 1.18.2.
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* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.2.
2019-06-29 01:34:42 +02:00
3e265d968b
gnu: r-rsubread: Update to 1.34.4.
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* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.4.
2019-06-29 01:34:42 +02:00
Marius Bakke