Commit Graph

640 Commits

Author SHA1 Message Date
Ricardo Wurmus e3323e0707
gnu: r-commonmark: Update to 1.4.
* gnu/packages/statistics.scm (r-commonmark): Update to 1.4.
2017-09-01 15:11:51 +02:00
Ricardo Wurmus 5d84369bda
gnu: r-ade4: Update to 1.7-8.
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-8.
2017-09-01 15:11:50 +02:00
Ricardo Wurmus fb10c923b3
gnu: r-tibble: Update to 1.3.4.
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.4.
2017-09-01 15:11:50 +02:00
Ricardo Wurmus edd5fd7208
gnu: r-rlang: Update to 0.1.2.
* gnu/packages/statistics.scm (r-rlang): Update to 0.1.2.
2017-09-01 15:11:49 +02:00
Ricardo Wurmus 5a00ef0950
gnu: r-knitr: Update to 1.17.
* gnu/packages/statistics.scm (r-knitr): Update to 1.17.
2017-09-01 15:11:49 +02:00
Ricardo Wurmus 3949aef601
gnu: r-bh: Update to 1.65.0-1.
* gnu/packages/statistics.scm (r-bh): Update to 1.65.0-1.
2017-09-01 15:11:49 +02:00
Ricardo Wurmus b93881b9c5
gnu: r-scales: Update to 0.5.0.
* gnu/packages/statistics.scm (r-scales): Update to 0.5.0.
[propagated-inputs]: Add r-r6 and r-viridislite.
2017-09-01 15:11:48 +02:00
Ricardo Wurmus 2d99a31607
gnu: r-mgcv: Update to 1.8-19.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-19.
2017-09-01 15:11:48 +02:00
Ricardo Wurmus fefe9f4753
gnu: r-matrix: Update to 1.2-11.
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-11.
2017-09-01 15:11:48 +02:00
Ricardo Wurmus caa4e796e4
gnu: Add r-dbplyr.
* gnu/packages/statistics.scm (r-dbplyr): New variable.
2017-08-31 18:24:51 +02:00
Ricardo Wurmus 174fbd5f3b
gnu: r-minimal: Remove timestamp from man page.
* gnu/packages/statistics.scm (r-minimal)[arguments]: Adjust
"build-reproducibly" phase to prevent the bundled help2man script from
printing the current month and year.
2017-08-28 15:51:05 +02:00
Efraim Flashner af9bb4cab8
gnu: pspp: Update to 1.0.1.
* gnu/packages/statistics.scm (pspp): Update to 1.0.1.
2017-08-28 14:44:41 +03:00
Ricardo Wurmus bd3a184613
gnu: r-minimal: Do not compress serialized files.
* gnu/packages/statistics.scm (r-minimal)[arguments]: Replace build phase
"patch-which" with "do-not-compress-serialized-files".
[propagated-inputs]: Move "which" from here...
[inputs]: ...to here.

Fixes <https://bugs.gnu.org/28157>.
2017-08-22 16:24:24 +02:00
Ricardo Wurmus 6be54a8751
gnu: Add rmath-standalone.
* gnu/packages/statistics.scm (rmath-standalone): New variable.
2017-08-22 16:24:24 +02:00
Efraim Flashner bda6c35093
gnu: pspp: Update to 1.0.0.
* gnu/packages/statistics.scm (pspp): Update to 1.0.0.
2017-08-20 21:44:47 +03:00
Ricardo Wurmus a8cd352304
gnu: r-minimal: Work around failure to embed reference to "which".
* gnu/packages/statistics.scm (r-minimal)[arguments]: Add phase "patch-which".
[native-inputs]: Move "which" from here...
[propagated-inputs]: ...to here.
2017-08-20 14:00:04 +02:00
Ricardo Wurmus 97cb349dc1
gnu: r-trimcluster: Update license.
* gnu/packages/statistics.scm (r-trimcluster)[license]: Also specify GPLv3+.
2017-08-17 17:26:11 +02:00
Efraim Flashner adcb30642c
gnu: pspp: Update to 0.11.0.
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
2017-08-16 17:57:40 +03:00
Efraim Flashner 2d430f2923
Revert "gnu: pspp: Update to 0.11.0."
This FTBFS on x86_64 and i686.

This reverts commit f4c808df5b.
2017-08-15 10:03:40 +03:00
Efraim Flashner f4c808df5b
gnu: pspp: Update to 0.11.0.
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
2017-08-13 10:16:17 +03:00
Ricardo Wurmus c5f744a68d
gnu: Add r-robust.
* gnu/packages/statistics.scm (r-robust): New variable.
2017-08-09 20:08:13 +02:00
Ricardo Wurmus 5d0afe8849
gnu: Add r-fit-models.
* gnu/packages/statistics.scm (r-fit-models): New variable.
2017-08-09 20:08:13 +02:00
Ricardo Wurmus 0bae5fd6a7
gnu: Add r-rrcov.
* gnu/packages/statistics.scm (r-rrcov): New variable.
2017-08-09 20:08:13 +02:00
Ricardo Wurmus 23841b2573
gnu: Add r-pcapp.
* gnu/packages/statistics.scm (r-pcapp): New variable.
2017-08-09 20:08:13 +02:00
Ricardo Wurmus 0ecd065839
gnu: r-gdtools: Update to 0.1.5.
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.5.
2017-08-09 20:08:12 +02:00
Ricardo Wurmus c3317cd9fb
gnu: r-ggbeeswarm: Update to 0.6.0.
* gnu/packages/statistics.scm (r-ggbeeswarm): Update to 0.6.0.
2017-08-09 20:08:12 +02:00
Ricardo Wurmus 1738138cb3
gnu: r-igraph: Move to (gnu packages graph).
* gnu/packages/statistics.scm (r-igraph): Move from here...
* gnu/packages/graph.scm (r-igraph): ...to here.
2017-08-09 14:47:47 +02:00
Ricardo Wurmus 2267e4d3f6
gnu: r-purrr: Update to 0.2.3.
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.3.
[propagated-inputs]: Remove r-rcpp and r-lazyeval; add r-rlang.
2017-08-03 17:53:55 +02:00
Ricardo Wurmus ceb802a31c
gnu: r-desc: Update to 1.1.1.
* gnu/packages/statistics.scm (r-desc): Update to 1.1.1.
2017-08-03 17:53:55 +02:00
Ricardo Wurmus 85cd755417
gnu: r-tclust: Update to 1.2-7.
* gnu/packages/statistics.scm (r-tclust): Update to 1.2-7.
2017-08-03 17:53:53 +02:00
Ricardo Wurmus 6bb4bfa4bc
gnu: r-car: Update to 2.1-5.
* gnu/packages/statistics.scm (r-car): Update to 2.1-5.
2017-08-03 17:53:53 +02:00
Ricardo Wurmus 0f008abe7a
gnu: r-rcppeigen: Update to 0.3.3.3.0.
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.3.0.
2017-08-03 17:53:53 +02:00
Ricardo Wurmus 12c3bbb662
gnu: r-pbapply: Update to 1.3-3.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.3-3.
2017-08-03 17:53:52 +02:00
Ricardo Wurmus 4431dd3a4e
gnu: r-vgam: Update to 1.0-4.
* gnu/packages/statistics.scm (r-vgam): Update to 1.0-4.
2017-08-03 17:53:52 +02:00
Ricardo Wurmus 41692b2963
gnu: r-mclust: Update to 5.3.
* gnu/packages/statistics.scm (r-mclust): Update to 5.3.
2017-08-03 17:53:52 +02:00
Ricardo Wurmus 60869fb2f8
gnu: r-flexmix: Update to 2.3-14.
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-14.
2017-08-03 17:53:52 +02:00
Ricardo Wurmus 62d3afc3d6
gnu: r-fastica: Update to 1.2-1.
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-1.
2017-08-03 17:53:52 +02:00
Ricardo Wurmus df03b6f90c
gnu: r-cowplot: Update to 0.8.0.
* gnu/packages/statistics.scm (r-cowplot): Update to 0.8.0.
2017-08-03 17:53:51 +02:00
Ricardo Wurmus d58faa7f44
gnu: r-rann: Update to 2.5.1.
* gnu/packages/statistics.scm (r-rann): Update to 2.5.1.
2017-08-03 17:53:51 +02:00
Ricardo Wurmus a8c2706de2
gnu: r-statmod: Update to 1.4.30.
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.30.
2017-08-03 17:53:51 +02:00
Ricardo Wurmus 80d1185076
gnu: r-gdata: Update to 2.18.0.
* gnu/packages/statistics.scm (r-gdata): Update to 2.18.0.
2017-08-03 17:53:51 +02:00
Ricardo Wurmus 2c75199c56
gnu: r-sfsmisc: Update to 1.1-1.
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-1.
2017-08-03 17:53:51 +02:00
Ricardo Wurmus 1d256438c8
gnu: r-googlesheets: Update to 0.2.2.
* gnu/packages/statistics.scm (r-googlesheets): Update to 0.2.2.
2017-08-03 17:53:50 +02:00
Ricardo Wurmus 9b9fef0eaf
gnu: r-tidyr: Update to 0.6.3.
* gnu/packages/statistics.scm (r-tidyr): Update to 0.6.3.
2017-08-03 17:53:50 +02:00
Ricardo Wurmus e1cd25bc78
gnu: r-glmnet: Update to 2.0-10.
* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-10.
2017-08-03 17:53:50 +02:00
Ricardo Wurmus 1c576cbadb
gnu: r-irlba: Update to 2.2.1.
* gnu/packages/statistics.scm (r-irlba): Update to 2.2.1.
2017-08-03 17:53:50 +02:00
Ricardo Wurmus 81c057ced9
gnu: r-sparsem: Update to 1.77.
* gnu/packages/statistics.scm (r-sparsem): Update to 1.77.
2017-08-03 17:53:50 +02:00
Ricardo Wurmus 127b926bc1
gnu: r-segmented: Update to 0.5-2.1.
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-2.1.
2017-08-03 17:53:49 +02:00
Ricardo Wurmus fe9917284f
gnu: r-xml: Update to 3.98-1.9.
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.9.
2017-08-03 17:53:49 +02:00
Ricardo Wurmus cc8ba9b69c
gnu: r-rmarkdown: Update to 1.6.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.6.
2017-08-03 17:53:49 +02:00
Ricardo Wurmus 7c172eacfa
gnu: r-rcpparmadillo: Update to 0.7.900.2.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.900.2.0.
2017-08-03 17:53:49 +02:00
Ricardo Wurmus 1c41d51743
gnu: r-plotrix: Update to 3.6-5.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-5.
2017-08-03 17:53:49 +02:00
Ricardo Wurmus 76040b8561
gnu: r-readr: Update to 1.1.1.
* gnu/packages/statistics.scm (r-readr): Update to 1.1.1.
2017-08-03 17:53:48 +02:00
Ricardo Wurmus d8048a1212
gnu: r-withr: Update to 2.0.0.
* gnu/packages/statistics.scm (r-withr): Update to 2.0.0.
2017-08-03 17:53:48 +02:00
Ricardo Wurmus f212bf84ab
gnu: r-git2r: Update to 0.19.0.
* gnu/packages/statistics.scm (r-git2r): Update to 0.19.0.
2017-08-03 17:53:48 +02:00
Ricardo Wurmus 58e1ce86ab
gnu: r-checkmate: Update to 1.8.3.
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.3.
2017-08-03 17:53:48 +02:00
Ricardo Wurmus 63f934e672
gnu: r-backports: Update to 1.1.0.
* gnu/packages/statistics.scm (r-backports): Update to 1.1.0.
2017-08-03 17:53:48 +02:00
Ricardo Wurmus c832d326a1
gnu: r-formula: Update to 1.2-2.
* gnu/packages/statistics.scm (r-formula): Update to 1.2-2.
2017-08-03 17:53:47 +02:00
Ricardo Wurmus f05c6275b7
gnu: r-r6: Update to 2.2.2.
* gnu/packages/statistics.scm (r-r6): Update to 2.2.2.
2017-08-03 17:53:47 +02:00
Ricardo Wurmus b07c8c0156
gnu: r-knitr: Update to 1.16.
* gnu/packages/statistics.scm (r-knitr): Update to 1.16.
2017-08-03 17:53:47 +02:00
Ricardo Wurmus 6dc86e8dfc
gnu: r-formatr: Update to 1.5.
* gnu/packages/statistics.scm (r-formatr): Update to 1.5.
2017-08-03 17:53:47 +02:00
Ricardo Wurmus 12cd797541
gnu: r-evaluate: Update to 0.10.1.
* gnu/packages/statistics.scm (r-evaluate): Update to 0.10.1.
2017-08-03 17:53:47 +02:00
Ricardo Wurmus d5ce380711
gnu: r-dbi: Update to 0.7.
* gnu/packages/statistics.scm (r-dbi): Update to 0.7.
2017-08-03 17:53:47 +02:00
Ricardo Wurmus 831858a7d3
gnu: r-bit64: Update to 0.9-7.
* gnu/packages/statistics.scm (r-bit64): Update to 0.9-7.
2017-08-03 17:53:46 +02:00
Ricardo Wurmus 6fb21ed2a3
gnu: r-mgcv: Update to 1.8-18.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-18.
2017-08-03 17:53:46 +02:00
Ricardo Wurmus dbeda1b4a0
gnu: r-matrix: Update to 1.2-10.
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-10.
2017-08-03 17:53:46 +02:00
Ricardo Wurmus 74b037df64
gnu: r-foreign: Update to 0.8-69.
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-69.
2017-08-03 17:53:46 +02:00
Ricardo Wurmus af1eeabe89
gnu: r-boot: Update to 1.3-20.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-20.
2017-08-03 17:53:46 +02:00
Ricardo Wurmus 64c6712d03
gnu: r-knitrbootstrap: Update to 1.0.1.
* gnu/packages/statistics.scm (r-knitrbootstrap): Update to 1.0.1.
2017-08-03 17:53:44 +02:00
Ricardo Wurmus c628b8418a
gnu: r-ranger: Update to 0.8.0.
* gnu/packages/statistics.scm (r-ranger): Update to 0.8.0.
[propagated-inputs]: Add r-matrix and r-rcppeigen.
2017-08-03 17:53:44 +02:00
Ricardo Wurmus cc9a778ecc
gnu: r-hmisc: Update to 4.0-3.
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0-3.
[propagated-inputs]: Remove r-base64.
2017-08-03 17:53:43 +02:00
Ricardo Wurmus f9b3760636
gnu: r-plotly: Update to 4.7.1.
* gnu/packages/statistics.scm (r-plotly): Update to 4.7.1.
[propagated-inputs]: Add r-crosstalk, r-data-table, r-htmltools, and
r-rcolorbrewer.
2017-08-03 17:53:43 +02:00
Ricardo Wurmus d59050823e
gnu: r-igraph: Update to 1.1.2.
* gnu/packages/statistics.scm (r-igraph): Update to 1.1.2.
[propagated-inputs]: Remove r-nmf; add r-matrix and r-pkgconfig.
2017-08-03 17:53:43 +02:00
Ricardo Wurmus 7b3688150b
gnu: r-purrr: Update to 0.2.2.2.
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.2.2.
[propagated-inputs]: Remove r-bh and r-dplyr; add r-tibble.
2017-08-03 17:53:43 +02:00
Ricardo Wurmus 5fc74f24bf
gnu: r-devtools: Update to 1.13.3.
* gnu/packages/statistics.scm (r-devtools): Update to 1.13.3.
[propagated-inputs]: Remove r-curl, r-digest, r-evaluate, r-roxygen2, and
r-rversions.
2017-08-03 17:53:43 +02:00
Ricardo Wurmus aad948a0ea
gnu: r-tibble: Update to 1.3.3.
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.3.
[propagated-inputs]: Remove r-lazyeval, add r-rlang.
2017-08-03 17:53:43 +02:00
Ricardo Wurmus a40b2c2129
gnu: r-dplyr: Update to 0.7.2.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.2.
[propagated-inputs]: Remove r-lazyeval, r-dbi; add r-rlang, r-plogr, r-glue,
r-pkgconfig, r-bindrcpp.
2017-08-03 17:53:42 +02:00
Ricardo Wurmus a8cba9dd11
gnu: r-rcpp: Move to (gnu packages cran).
* gnu/packages/statistics.scm (r-rcpp): Move from here...
* gnu/packages/cran.scm (r-rcpp): ...to here.
2017-08-03 17:53:42 +02:00
Ricardo Wurmus 736332c79c
gnu: r-rcpp: Update to 0.12.12.
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.12.
2017-08-03 17:53:42 +02:00
Ricardo Wurmus 847b457253
gnu: r-plogr: Move to (gnu packages cran).
* gnu/packages/statistics.scm (r-plogr): Move from here...
* gnu/packages/cran.scm (r-plogr): ...to here.
2017-08-03 17:53:41 +02:00
Roel Janssen 2f06dc0435
gnu: Add r-rlang.
* gnu/packages/statistics.scm (r-rlang): New variable.
2017-08-02 00:57:39 +02:00
Roel Janssen 8060a61798
gnu: r-rsqlite: Update to 2.0.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.0.
2017-08-02 00:23:16 +02:00
Roel Janssen 796237a9a4
gnu: Add r-blob.
* gnu/packages/statistics.scm (r-blob): New variable.
2017-08-02 00:22:33 +02:00
Roel Janssen aa184803f8
gnu: Add r-pkgconfig.
* gnu/packages/statistics.scm (r-pkgconfig): New variable.
2017-08-02 00:21:40 +02:00
Roel Janssen 14fce399cc
gnu: r-foreign: Update hash after upstream tarball change.
* gnu/packages/statistics.scm (r-foreign):  Update hash.  The only difference
  in the tarball is the metadata.  The contents are identical.
2017-08-01 23:07:58 +02:00
Roel Janssen cdf124c607
gnu: r-foreign: Remove duplicate recipe.
* gnu/packages/statistics.scm (r-foreign): Remove duplicate recipe.
2017-08-01 23:06:02 +02:00
Ricardo Wurmus 8f2c410fc5
gnu: r-preprocesscore: Update to 1.38.1.
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.38.1.
2017-07-27 10:04:09 +02:00
Ricardo Wurmus 056468dc5f
gnu: Add cran module.
* gnu/packages/cran.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/statistics.scm (r-colorspace): Move to cran.scm.
2017-07-22 23:48:57 +02:00
Efraim Flashner fcf4003950
gnu: r-spams: Update to 2.6-2017-03-22.
* gnu/packages/statistics.scm (r-spams): Update to 2.6-2017-03-22.
[arguments]: Remove R-3.3 work-around and syntax fixes, add phase to
prevent tuning r-spams to the compiling hardware.
2017-06-29 10:02:58 +03:00
Arun Isaac 148585c240
gnu: Move contents of zip module into compression module.
* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to...
* gnu/packages/compression.scm: ...here.
* gnu/packages/zip.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file.
* po/packages/POTFILES.in: Unregister deleted file.
* gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression,
docbook, documentation, fonts, fpga, game-development, games, gl, gnome,
gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice,
markup, maths, mc, monitoring, music, php, pretty-print, python, scheme,
smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml,
zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm:
Adapt module import.
2017-06-20 18:10:35 +05:30
Roel Janssen 26bbdabdaa
gnu: r-devtools: Update to 1.13.2.
* gnu/packages/statistics.scm (r-devtools): Update to 1.13.2.
2017-06-17 20:53:22 +02:00
Ricardo Wurmus 1dacc26956
gnu: Add r-fdrtool.
* gnu/packages/statistics.scm (r-fdrtool): New variable.
2017-06-09 03:28:40 +02:00
Ricardo Wurmus db0bb6f0af
gnu: Add r-lubridate.
* gnu/packages/statistics.scm (r-lubridate): New variable.
2017-06-09 03:27:49 +02:00
Roel Janssen 4646a79c65
gnu: r-preprocesscore: Update to 1.38.0.
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.38.0.
2017-04-28 11:05:43 +02:00
Ricardo Wurmus a71d769d1e
gnu: r-minimal: Update to 3.4.0.
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.0.
[arguments]: Set timezone to UTC+1 in "set-timezone" phase to avoid regression
test failure.
2017-04-23 22:48:19 +02:00
Ricardo Wurmus 3b74b7a283
gnu: r-caret: Update to 6.0-76.
* gnu/packages/statistics.scm (r-caret): Update to 6.0-76.
[propagated-inputs]: Add r-lattice and r-nlme.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus 96071a6db2
gnu: r-lme4: Update to 1.1-13.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-13.
[propagated-inputs]: Add r-lattice and r-matrix.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus 0d5bc9382a
gnu: r-quantreg: Update to 5.33.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.33.
[propagated-inputs]: Add r-matrix.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus f1a313dfde
gnu: r-compquadform: Update to 1.4.3.
* gnu/packages/statistics.scm (r-compquadform): Update to 1.4.3.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus 50d0b2c158
gnu: r-zoo: Update to 1.8-0.
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-0.
2017-04-22 23:30:37 +02:00