Commit Graph

27377 Commits (7342edf390031556bb27c21e51dfbd3d5ef49a45)

Author SHA1 Message Date
Marius Bakke 0c86790bfd
Revert "gnu: glibc: Fix CVE-2017-15670, CVE-2017-15671."
These issues has been classified as minor by Debian:

https://security-tracker.debian.org/tracker/CVE-2017-15670
https://security-tracker.debian.org/tracker/CVE-2017-15671

In addition, the patch only fixes one of the two CVEs it claims to fix.  We
don't backport most CVEs, especially non-critical ones, so no need to carry
this (which is in 2.26).  See discussion at <https://bugs.gnu.org/29490>.

This reverts commit 60e29339d8.
2018-01-02 16:55:17 +01:00
Tobias Geerinckx-Rice 8057dee15b
gnu: htslib: Mark up description.
* gnu/packages/bioinformatics.scm (htslib)[description]: Use @command{}.
2018-01-02 16:13:23 +01:00
Ricardo Wurmus 7edee34427
gnu: ribotaper: Wrap executables.
* gnu/packages/bioinformatics.scm (ribotaper)[arguments]: Add phase
"wrap-executables".
2018-01-02 12:07:06 +01:00
Rutger Helling 1adc6013fe
gnu: wine64-staging: Copy missing man file.
* gnu/packages/wine.scm (wine64-staging)[arguments]: Copy missing man file from
"wine-staging" input. Clarify 'copy-wine32-files phase with comments.
[synopsis]: Use proper "WoW64" term.
2018-01-02 11:40:02 +01:00
Rutger Helling 68e4921130
gnu: wine64: Copy missing man file.
* gnu/packages/wine.scm (wine64)[arguments]: Copy missing man file from "wine"
input. Clarify 'copy-wine32-files phase with comments.
[synopsis]: Use proper "WoW64" term.
2018-01-02 11:39:57 +01:00
Rutger Helling 95c45e5349
gnu: wine-staging: Update synopsis.
* gnu/packages/wine.scm (wine-staging)[synopsis]: Clarify synopsis.
2018-01-02 08:32:22 +01:00
Rutger Helling 06e57331fc
gnu: wine: Update synopsis.
* gnu/packages/wine.scm (wine)[synopsis]: Clarify synopsis.
2018-01-02 08:32:18 +01:00
Mark H Weaver 4adde2a919
gnu: emacs-no-x: Remove more inputs from inherited emacs.
* gnu/packages/emacs.scm (emacs-no-x)[inputs]: Remove imagemagick,
libotf, and m17n-lib.
2018-01-02 02:21:29 -05:00
Mark H Weaver e1f32cf1b6
gnu: ocaml: Use gcc:lib from gcc, not gcc-4.9.
* gnu/packages/ocaml.scm (ocaml)[inputs]: Use canonical 'gcc', not gcc-4.9.
2018-01-02 02:15:12 -05:00
Tobias Geerinckx-Rice 6856518456
gnu: python-pysam: Update to 0.13.0.
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.13.0.
2018-01-02 02:13:38 +01:00
Tobias Geerinckx-Rice ddf38ece8a
gnu: htslib: Update to 1.6.
* gnu/packages/bioinformatics.scm (htslib): Update to 1.6.
2018-01-02 01:47:42 +01:00
Tobias Geerinckx-Rice e22473ffe2
gnu: ansible: Update to 2.4.2.0.
* gnu/packages/admin.scm (ansible): Update to 2.4.2.0.
[description]: Redistribute hyphens.
2018-01-02 01:17:58 +01:00
Tobias Geerinckx-Rice c89b9d63e1
gnu: moreutils: Update to 0.62.
* gnu/packages/moreutils.scm (moreutils): Update to 0.62.
2018-01-02 01:14:20 +01:00
Tobias Geerinckx-Rice ff18d0f186
gnu: ansible: Use HTTPS for home page.
* gnu/packages/admin.scm (ansible)[home-page]: Use HTTPS.
2018-01-02 00:31:55 +01:00
Tobias Geerinckx-Rice f0904b26d1
gnu: perl-archive-zip: Remove duplicate package definition.
* gnu/packages/perl.scm (perl-archive-zip): Remove duplicate variable.
2018-01-02 00:09:17 +01:00
Tobias Geerinckx-Rice b6f024ada7
gnu: Rename perl-zip to perl-archive-zip.
It's called Archive::Zip, after all.  Bring it in line with other modules.

* gnu/packages/compression.scm (perl-zip): Rename from this...
(perl-archive-zip): ...to this.
* gnu/packages/libreoffice.scm (libreoffice): Update the only caller.
2018-01-02 00:09:17 +01:00
Tobias Geerinckx-Rice d5960bf7c2
gnu: perl-zip: Update to 1.60.
* gnu/packages/compression.scm (perl-zip): Update to 1.60.
[native-inputs]: Add perl-test-mockmodule.
[home-page]: Use version-independent URL.
2018-01-02 00:09:17 +01:00
Tobias Geerinckx-Rice d948fe7ce8
gnu: Add perl-test-mockmodule.
* gnu/packages/perl-check.scm (perl-test-mockmodule): New public variable.
2018-01-02 00:09:16 +01:00
Tobias Geerinckx-Rice f1a2cb94ca
gnu: perl-check: Request to add packages alphabetically.
* gnu/packages/perl-check.scm: Copy comment from gnu/packages/perl.scm.
2018-01-02 00:09:16 +01:00
Tobias Geerinckx-Rice e84f22257f
gnu: Add perl-super.
* gnu/packages/perl.scm (perl-super): New public variable.
2018-01-02 00:09:16 +01:00
Tobias Geerinckx-Rice 49ab09e699
gnu: perl-zip: Tweak synopsis & description.
* gnu/packages/compression.scm (perl-zip)[synopsis]: Capitalise consisently.
[description]: Use @code{}.
2018-01-02 00:09:16 +01:00
Tobias Geerinckx-Rice d9465101f4
gnu: libksysguard: Update to 5.11.4.
* gnu/packages/kde.scm (libksysguard): Update to 5.11.4.
2018-01-02 00:09:15 +01:00
Tobias Geerinckx-Rice 263e9b851a
gnu: diffoscope: Update to 90.
* gnu/packages/package-management.scm (diffoscope): Update to 90.
2018-01-02 00:09:15 +01:00
Ludovic Courtès 92f36323c4
ui: It's 2018 now!
* guix/ui.scm (show-version-and-exit): Change year to 2018.
2018-01-01 18:22:28 +01:00
Mathieu Lirzin 397cd9cc41
doc: Update requirements in 'README'.
* README (Requirements): Update.
2018-01-01 18:21:55 +01:00
Ludovic Courtès a5e3d59bb3
gnu: python-jupyter-console: Make it installable.
Fixes <https://bugs.gnu.org/29860>.
Reported by Johannes Laute <j.laute3@googlemail.com>.

* gnu/packages/python.scm (python-jupyter-console-minimal)[name]: New field.
2018-01-01 18:21:55 +01:00
Danny Milosavljevic d1a08062c6
build-system/glib-or-gtk: Don't generate 'icon-theme.cache'.
* guix/build-system/glib-or-gtk.scm (glib-or-gtk-build): Don't generate
'icon-theme.cache'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-01 18:09:05 +01:00
Kei Kebreau f0aba38440
gnu: xonsh: Update to 0.6.0.
* gnu/packages/shells.scm (xonsh): Update to 0.6.0.
2017-12-31 21:28:40 -05:00
Tobias Geerinckx-Rice c300cae682
gnu: crypto++: Don't use ‘-march=native’.
* gnu/packages/crypto.scm (crypto++)[arguments]: Add
‘disable-native-optimisation’ phase.
2017-12-31 22:18:22 +01:00
Tobias Geerinckx-Rice 55dee52b9c
gnu: nasm: Update to 2.13.02.
* gnu/packages/assembly.scm (nasm): Update to 2.13.02.
2017-12-31 22:18:22 +01:00
Tobias Geerinckx-Rice cc17345d54
gnu: Add xxhash.
* gnu/packages/digest.scm: New file
(xxhash): New public variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
2017-12-31 22:18:22 +01:00
Efraim Flashner b4a330ac72
gnu: wine: Add support for armhf and aarch64.
* gnu/packages/wine.scm (wine)[arguments]: Target armhf-linux when
building on armhf or aarch64.
[supported-systems]: Add armhf and aarch64 to supported systems.
2017-12-31 22:58:27 +02:00
Leo Famulari 2a74f6f7e7
gnu: gimp: Fix CVE-2017-{17784,17785,17786,17787,17789}.
* gnu/packages/patches/gimp-CVE-2017-17784.patch,
gnu/packages/patches/gimp-CVE-2017-17785.patch,
gnu/packages/patches/gimp-CVE-2017-17786.patch,
gnu/packages/patches/gimp-CVE-2017-17787.patch,
gnu/packages/patches/gimp-CVE-2017-17789.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gimp.scm (gimp)[source]: Use them.
2017-12-31 13:51:20 -05:00
Rutger Helling c41fb54f95
gnu: wine64-staging: Add 32-bit support.
* gnu/packages/wine.scm (wine64-staging)[inputs]: Add wine-staging.
[arguments]: Install libraries to /lib/wine64. Don't inherit phases. Add
'copy-win32-files phase.
[description]: Update description.
-
2017-12-31 19:05:47 +01:00
Rutger Helling 58cbcb02a5
gnu: wine64: Add 32-bit support.
* gnu/packages/wine.scm (wine64)[inputs]: Add wine.
[arguments]: Install libraries to /lib/wine64. Don't inherit phases. Add
'copy-win32-files phase.
[description]: Update description.
2017-12-31 19:05:47 +01:00
Rutger Helling 5cead94554
gnu: wine: Install libraries to /lib/wine32.
* gnu/packages/wine.scm (wine)[arguments]: Install libraries to /lib/wine32.
2017-12-31 19:05:47 +01:00
Leo Famulari 8de9d5329e
gnu: Add kurly.
* gnu/packages/curl.scm (kurly): New variable.
2017-12-31 12:36:08 -05:00
Leo Famulari 12f496ba56
gnu: Add go-github-com-davidjpeacock-cli.
* gnu/packages/golang.scm (go-github-com-davidjpeacock-cli): New variable.
2017-12-31 12:36:08 -05:00
Leo Famulari 11b12655f0
gnu: Add go-github-com-aki237-nscjar.
* gnu/packages/golang.scm (go-github-com-aki237-nscjar): New variable.
2017-12-31 12:36:07 -05:00
Leo Famulari d3878e88f3
gnu: Add go-github-com-alsm-ioprogress.
* gnu/packages/golang.scm (go-github-com-alsm-ioprogress): New variable.
2017-12-31 12:36:07 -05:00
Christopher Baines 809b884260
gnu: packages: 0ad: Tweak the build options.
Use the -C make option, rather than changing directory before the build
phase. Add config=release to the make flags as this might improve performance,
and verbose=1 as this might make the build process clearer.

Also remove --minimal-flags, as I don't quite understand what this does, but
using it seems to remove lots of flags that would be used by default.

* gnu/packages/games.scm (0ad)[arguments]: Add #:make-flags, remove the
  --minimal-flags argument from the configure phase, remove the 'chdir phase,
  and change the chdir argument in the install phase.
2017-12-31 14:11:46 +00:00
Efraim Flashner 23de2e1d5f
Merge remote-tracking branch 'origin/master' into core-updates 2017-12-31 14:10:25 +02:00
Ludovic Courtès 091191c3dc
list-runtime-root: Fix off-by-one in 'strip-drop' call.
Fixes <https://bugs.gnu.org/29862>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* nix/scripts/list-runtime-roots.in (canonicalize-store-item): Define
'store' with a trailing "/".  Have the 'string-prefix?' call match the
'string-drop' call.
2017-12-31 11:18:30 +01:00
Mark H Weaver 1c27f72fc2
doc: Fix typo.
* doc/guix.texi (Desktop Services): "orMATE" --> "or MATE".
2017-12-30 21:05:09 -05:00
Ludovic Courtès ec6ba5c1fe
gnu: gcc: Fix cross-compilation to GNU/Hurd.
* gnu/packages/gcc.scm (gcc-configure-flags-for-triplet): Return
"--disable-libcilkrts" when TARGET matches "-gnu".
2017-12-31 01:20:30 +01:00
Ludovic Courtès c99a64e15f
gnu: guile-static: Reuse the existing phases.
This is a followup to 33c3a214a4.

* gnu/packages/make-bootstrap.scm (%guile-static)[arguments]: Use
'substitute-keyword-arguments'.  Honor the existing phases.
2017-12-31 01:20:30 +01:00
Danny Milosavljevic 6a1a69679d
build: dub-build-system: Make builds reproducible.
* guix/build/dub-build-system.scm (build): Make reproducible.
(check): Make reproducible.
2017-12-31 00:29:59 +01:00
ng0 431703ffd0
gnu: services: Add MATE desktop service.
* gnu/services/desktop.scm (<mate-desktop-configuration>,
mate-desktop-service-type): New variable.
(mate-desktop-service): New public variable.

* doc/guix.texi (Desktop Services): Document the service.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-12-30 22:55:26 +01:00
ng0 6ce4fc69f5
gnu: mate: Add more packages.
* gnu/packages/mate.scm (mate)[inputs]: Add "mate-user-guide", "mate-calc", "mate-backgrounds",
"mate-netbook", "hicolor-icon-theme", "mate-utils", "engrampa", "eom", "mate-polkit",
"mate-system-monitor", "mate-utils", "pluma", "atril".

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-12-30 22:55:26 +01:00
ng0 95073bfc3e
gnu: Add mate-polkit.
* gnu/packages/mate.scm (mate-polkit): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-12-30 22:55:25 +01:00