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8863 Commits

Author SHA1 Message Date
Ben Woodcroft 41ddebdd2a gnu: Add mafft. 
* gnu/packages/bioinformatics.scm (mafft): New variable.
 2015-09-16 23:06:14 +02:00
Efraim Flashner e864722731 gnu: Add keepassx. 
* gnu/packages/password-utils.scm (keepassx): New variable.
 2015-09-16 23:00:01 +02:00
Cyril Roelandt 2c9d96767a gnu: Add python-requests-mock. 
* gnu/packages/openstack.scm (python-requests-mock,
  python2-requests-mock): New variables.
 2015-09-16 22:53:36 +02:00
Cyril Roelandt de34aface7 gnu: Add python-webob. 
* gnu/packages/python.scm (python-webob, python2-webob): New variables.
 2015-09-16 22:53:36 +02:00
Cyril Roelandt c7c7a93621 gnu: Add python-oslo.context. 
* gnu/packages/openstack.scm (python-oslo.context,
  python2-oslo.context): New variables.
 2015-09-16 22:53:36 +02:00
Cyril Roelandt 5702efe3e9 gnu: Add python-oslo.serialization. 
* gnu/packages/openstack.scm (python-oslo.serialization,
  python2-oslo.serialization): New variables.
 2015-09-16 22:53:36 +02:00
Ricardo Wurmus 979f9e8aed gnu: sfarklib: Update to 2.24. 
* gnu/packages/compression.scm (sfarklib): Update to 2.24.
 2015-09-16 22:42:45 +02:00
Ludovic Courtès 2ed74cea5c gnu: imagemagick: Update to 6.9.2-1. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.2-1.
  [source]: Add imagemagick-test-segv.patch.
  [inputs]: Replace LIBJPEG-8 with LIBJPEG.
 2015-09-16 17:59:16 +02:00
Pjotr Prins f9ae2c068d gnu: Add ruby-log4r. 
* gnu/packages/ruby.scm (ruby-log4r): New variable.
 2015-09-16 08:41:46 -04:00
Vicente Vera Parra 8ea6b30fea gnu: Add r-dbi. 
* gnu/packages/statistics.scm (r-dbi): New variable.
 2015-09-16 12:01:12 +02:00
Mark H Weaver 1d6c8db57c gnu: valgrind: Adapt to glibc-2.22 and linux-libre-4.x. 
* gnu/packages/patches/valgrind-glibc-2.21.patch: Rename to ...
  gnu/packages/patches/valgrind-glibc-2.22.patch: ... this, and add a case for
  glibc-2.22.
* gnu/packages/patches/valgrind-linux-libre-4.x.patch: New file.
* gnu-system.am (dist_patch_DATA): Add the new file, and rename the other one.
* gnu/packages/valgrind.scm (valgrind)[source]: Add new patch.
 2015-09-15 18:21:16 -04:00
Andreas Enge b76b1dcb96 gnu: cups-filters: Add glib:bin as a native input. 
* gnu/packages/cups.scm (cups-filters)[native-inputs]: Add the bin output
  of the glib package.
 2015-09-15 23:55:09 +02:00
Ludovic Courtès f4e92db3cb nls: Add "TRANSLATORS:" comment about Texinfo. 
* gnu/packages/abiword.scm: Add comment above 'description'.
 2015-09-15 22:48:53 +02:00
Ludovic Courtès cbd02397b5 doc: Add guidelines for synopses and descriptions. 
* doc/guix.texi (Synopses and Descriptions): New node.
* doc/contributing.texi (Submitting Patches): Add item that
  cross-references it.
 2015-09-15 22:48:52 +02:00
Ludovic Courtès 2cbed07eef doc: Change authorship to "The GNU Guix Developers". 
* doc/guix.texi: Replace outdated @author list with just "The GNU Guix
  Developers".
 2015-09-15 22:48:52 +02:00
Vicente Vera Parra 6af4813430 gnu: Add r-lazyeval. 
* gnu/packages/statistics.scm (r-lazyeval): New variable.
 2015-09-15 22:33:57 +02:00
Mark H Weaver d02f38f3f8 gnu: gcc-toolchain: Don't try to delete OUT/bin/sh, which no longer exists. 
* gnu/packages/commencement.scm (gcc-toolchain)[arguments]: Remove code that
  deletes OUT/bin/sh and OUT/bin/bash, since those files no longer exist in
  our libc package.
 2015-09-15 16:12:35 -04:00
Vicente Vera Parra ed6094fc77 gnu: Add r-assertthat. 
* gnu/packages/statistics.scm (r-assertthat): New variable.
 2015-09-15 21:09:02 +02:00
pjotr.public12@thebird.nl 62e4cc5aa1 gnu: Add ruby-gherkin3. 
* gnu/packages/ruby.scm (ruby-gherkin3): New variable.
 2015-09-15 14:37:09 -04:00
Mathieu Lirzin 3500e659f1 lint: Add 'check-texinfo-markup' checker. 
* guix/script/lint.scm (check-description-style): Check for invalid
  Texinfo markup.
* tests/lint.scm: Test it.
 2015-09-15 19:01:23 +02:00
宋文武 c136546aaa gnu: librsvg: Update to 2.40.10. 
* gnu/packages/gnome.scm (librsvg): Update to 2.40.10.
 2015-09-15 20:32:23 +08:00
宋文武 4ea50f2bc8 gnu: libgsf: Update to 1.14.34. 
* gnu/packages/gnome.scm (libgsf): Update to 1.14.34.
 2015-09-15 20:31:47 +08:00
宋文武 eb6afbcde7 gnu: harfbuzz: Add "bin" output. 
* gnu/packages/gtk.scm (harfbuzz)[outputs]: New field.
  [arguments]<#:configure-flags>: Pass '--bindir'.
 2015-09-15 20:19:39 +08:00
Alex Kost 83d95c7b36 emacs: Add "View build log" action to build popup. 
* emacs/guix-command.el (guix-run-view-build-log): New function.
  (guix-command-additional-execute-arguments,
  guix-command-special-executors): Add entries for "View build log"
  action.
* emacs/guix-utils.el (guix-find-file-or-url): New function.
 2015-09-15 15:19:31 +03:00
Alex Kost 34850cd59d emacs: Add modes for viewing build logs. 
* emacs/guix-build-log.el: New file.
* emacs.am (ELFILES): Add it.
* doc/emacs.texi (Emacs Build Log): Document it.  New node.
  (Emacs Interface): Add it.
* doc/guix.texi (Top): Likewise.
 2015-09-15 15:19:31 +03:00
Alex Kost ea369ee1b0 emacs: Display guix command errors in the minibuffer. 
* emacs/guix-main.scm (output+error): New procedure.
  (guix-command-output): Use it.
* emacs/guix-base.el (guix-command-output): Display error output in the
  minibuffer.
 2015-09-15 15:19:31 +03:00
Alex Kost 46e17df661 emacs: Add customization groups for faces. 
* emacs/guix.el (guix-faces): New custom group.
* emacs/guix-base.el (guix-operation-option-key): Use it.
  (guix-define-buffer-type): Generate faces group.
* emacs/guix-info.el: Adjust faces to use new groups.
  (guix-info-faces): New custom group.
* emacs/guix-list.el: Likewise
  (guix-list-faces): New custom group.
 2015-09-15 15:19:30 +03:00
宋文武 fd9b3b43ab gnu: harfbuzz: Propagate graphite2 and icu4c. 
* gnu/packages/gtk.scm (harfbuzz): Move graphite2 and icu4c to 'propagated-inputs'.
  [source]: Improve formatting.
 2015-09-15 20:11:52 +08:00
Mark H Weaver 40f4817846 gnu: util-linux: Adapt util-linux-tests.patch to version 2.27. 
This is a followup to commit 57a66c2729.

* gnu/packages/patches/util-linux-tests.patch: Adapt to util-linux 2.27.
 2015-09-15 01:41:57 -04:00
Mark H Weaver 57a66c2729 gnu: util-linux: Update to 2.27. 
* gnu/packages/linux.scm (util-linux): Update to 2.27.
 2015-09-15 00:17:50 -04:00
Mark H Weaver 8338c24163 gnu: util-linux: Minor fixes. 
* gnu/packages/linux.scm (util-linux)[source]: Return #t from the snippet.
  [arguments]: Remove "--enable-ddate" from configure flags, as it is no
  longer recognized (ddate is no longer included in util-linux).
 2015-09-15 00:17:49 -04:00
Eric Bavier 50f5c46d06 guix: lint: Check for meaningful origin file names. 
* guix/scripts/lint.scm (check-source-file-name): New procedure.
  (%checkers): Add 'source-file-name' checker.
* tests/lint.scm ("source-file-name", "source-file-name: v prefix")
  ("source-file-name: valid", "source-file-name: bad checkout")
  ("source-file-name: good checkout"): New tests.
* doc/guix.texi (Invoking guix lint): Mention file name check.
 2015-09-14 18:03:33 -05:00
Eric Bavier 3b4d01035f guix: packages: Add origin-actual-file-name. 
* guix/scripts/graph.scm (uri->file-name, node-full-name): Move origin file
  name logic to...
* guix/packages.scm (origin-actual-file-name): ...here.
* tests/packages.scm ("origin-actual-file-name")
  ("origin-actual-file-name, file-name"): New tests.
 2015-09-14 18:02:37 -05:00
Steve Sprang eb95ace9f1 download: Avoid type errors when formatting download progress output. 
* guix/build/download.scm (nearest-exact-integer): New procedure.
  (seconds->string, byte-count->string): Use it.
 2015-09-14 23:36:26 -04:00
Ludovic Courtès d89e0990f5 guix system: Gracefully handle incomplete commands. 
Fixes <http://bugs.gnu.org/21451>.
Reported by Steve Sprang <steve.sprang@gmail.com>.

* guix/scripts/system.scm (guix-system)[option-arguments]: Error out
  when ACTION is #f.
 2015-09-15 00:04:27 +02:00
Mathieu Lirzin 17d8e33f31 doc: Use the recommended Scheme format. 
Apply the recommended formatting rules from '.dir-locals.el' to the
examples in the manual in order to fulfill it's purpose of being a
reference.

* doc/package-hello.scm: Indent it.
* doc/guix.texi (Defining Packages, Version Numbers): Likewise.
* gnu/packages/base.scm (hello): Be consistent with the manual.
 2015-09-14 23:10:58 +02:00
Pjotr Prins 9c38b54027 gnu: Add bio-locus. 
* gnu/packages/bioinformatics.scm (bio-locus): New variable.
 2015-09-14 12:06:04 -04:00
David Thompson 801a0a2219 Revert "gnu: Add bio-locus." 
This reverts commit b429c4fbb0.
 2015-09-14 12:05:15 -04:00
Pjotr Prins b429c4fbb0 gnu: Add bio-locus. 
* gnu/packages/bioinformatics.scm (bio-locus): New variable.
 2015-09-14 11:36:30 -04:00
宋文武 1b7b7f27bd gnu: cmake: Update to 3.3.1. 
* gnu/packages/cmake.scm (cmake): Update to 3.3.1.  Enable parallel
  tests.
 2015-09-14 21:05:38 +08:00
David Thompson 239db054a7 gnu: system: Add Linux container module. 
* gnu/system/linux-container.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu/system.scm: Export 'operating-system-etc-directory',
  'operating-system-boot-script', 'operating-system-locale-directory', and
  'file-union'.
  (operating-system-boot-script): Add #:container? keyword argument.
  (operating-system-activation-script): Add #:container?  keyword argument.
  Don't call 'activate-firmware' or 'activate-ptrace-attach' when activating a
  container.
 2015-09-14 08:30:46 -04:00
David Thompson 5dc876231b build: ruby: Add support for tarball and directory sources. 
Previously, the Ruby build system only knew how to work with gem archives,
which made it difficult to build unreleased gems from a Git repository or
released gems in tarball form.

* gnu/build/ruby-build-system.scm (gnu:unpack, gem-archive?): New procedures.
  (unpack): Use GNU build system unpack phase for non-gem sources.
  (build): Rebuild the gemspec iff the source is a gem archive.
* guix.texi ("ruby-build-system"): Mention that tarballs and directories are
  acceptable.
 2015-09-14 08:29:07 -04:00
宋文武 f56e8f5730 gnu: pciutils: Update to 3.3.1. 
* gnu/packages/pciutils.scm (pciutils): Update to 3.3.1.
 2015-09-14 20:01:13 +08:00
宋文武 62bffcaa3b Revert "gnu: libtasn1: Update to 4.6." 
Causes a test of GnuTLS to fail:
<http://lists.gnu.org/archive/html/help-libtasn1/2015-09/msg00003.html>.

This reverts commit 866ee34f7e.
 2015-09-14 19:21:23 +08:00
Cyril Roelandt 27cc9f2544 gnu: Add python-oslo.utils. 
* gnu/packages/openstack.scm (python-oslo.utils, python2-oslo.utils): New variables.
 2015-09-14 00:14:56 +02:00
Cyril Roelandt 2713527e06 gnu: Add python-debtcollector. 
* gnu/packages/openstack.scm (python-debtcollector,
  python2-debtcollector): New variables.
 2015-09-14 00:14:56 +02:00
Cyril Roelandt 5e412b6383 gnu: Add python-monotonic. 
* gnu/packages/python.scm (python-monotonic, python2-monotonic): New variables.
 2015-09-14 00:14:56 +02:00
Cyril Roelandt b85c85becd gnu: Add python-iso8601. 
* gnu/packages/python.scm (python-iso8601, python2-iso8601): New variables.
 2015-09-14 00:14:55 +02:00
Cyril Roelandt 8c692a5258 gnu: Add python-wrapt 
* gnu/packages/python.scm (python-wrapt, python2-wrapt): New variables.
 2015-09-14 00:14:53 +02:00
Cyril Roelandt ed56af06bc gnu: Add python-oslo.config. 
* gnu/packages/openstack.scm (python-oslo.config, python2-oslo.config): New variables.
 2015-09-13 23:31:57 +02:00