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33126 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice 35b3236732
gnu: r-haven: Update to 1.1.2. 
* gnu/packages/cran.scm (r-haven): Update to 1.1.2.
[inputs]: Add zlib.
 2018-06-28 16:20:15 +02:00
Tobias Geerinckx-Rice e077186334
gnu: r-ggpubr: Update to 0.1.7. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.1.7.
 2018-06-28 16:20:15 +02:00
Rutger Helling 219ae29b6b
gnu: wine: Update to 3.0.2. 
* gnu/packages/wine.scm (wine): Update to 3.0.2.
 2018-06-28 15:18:42 +02:00
Gábor Boskovits 4c9aa15edb
gnu: java-eclipse-jetty-security: Disable failing test. 
* gnu/packages/web.scm (java-eclise-jetty-security): Disable failing test.
* gnu/packages/web.scm (java-eclipse-jetty-security-9.2): Adjust accordingly.
 2018-06-28 10:34:16 +02:00
Ricardo Wurmus 4bfd8579f9
gnu: astyle: Update to 3.1. 
* gnu/packages/code.scm (astyle): Update to 3.1.
 2018-06-27 23:51:00 +02:00
Ludovic Courtès 108015df6d
self: Add dependency on GnuTLS. 
Fixes <https://bugs.gnu.org/31983>.
Reported by Fis Trivial <ybbs.daans@hotmail.com>.

* guix/self.scm (specification->package): Add "gnutls" and
"guile2.0-gnutls".
(compiled-guix)[gnutls]: New variable.
[dependencies]: Add it.
 2018-06-27 23:30:44 +02:00
Ludovic Courtès 5007fbb76e
nls: Update 'pt_BR' translation. 2018-06-27 23:30:44 +02:00
Taylan Kammer 0925c0ea77
scripts: gc: Report size in MiBs instead of bytes. 
* guix/scripts/gc.scm (guix-gc): Show info in MiBs not bytes.
 2018-06-28 00:29:46 +02:00
Gábor Boskovits 3785ccd201
gnu: java-aqute-libg-bootstrap: Use base package phases. 
* gnu/packages/java.scm (java-aqute-libg-boostrap)[arguments]: Do not ignore
base package arguments.
 2018-06-27 19:54:50 +02:00
Kei Kebreau eb9dda9c83
gnu: autojump: Update to 22.5.1. 
* gnu/packages/admin.scm (autojump): Update to 22.5.1.
[arguments]: Use 'invoke' in 'check' phase.  Rewrite 'install' phase for the
updated installation script.
 2018-06-27 11:20:05 -04:00
Ludovic Courtès bf5e9bfcf9
gnu: guile-lib: Update to 0.2.6. 
* gnu/packages/guile.scm (guile-lib): Update to 0.2.6.  Add 'modules'
and 'snippet'.
 2018-06-27 16:58:59 +02:00
Ludovic Courtès 26db747a86
ui: Hint at the installation of locale packages and 'GUIX_LOCPATH'. 
* guix/ui.scm (install-locale): Hide the "warning: failed to install
locale" on Guile 2.2.  Add a hint about 'glibc-utf8-locales' and
'GUIX_LOCPATH'.
 2018-06-27 16:58:59 +02:00
Ludovic Courtès fc6cbb311c
doc: Specify Guile-SQLite3 minimum version. 
* doc/guix.texi (Requirements): Specify the minimum guile-sqlite3
version.
* README (Requirements): Likewise.
 2018-06-27 16:58:59 +02:00
Ludovic Courtès 319e26e4de
gnu: guile-sqlite3: Update to 0.1.0. 
* gnu/packages/guile.scm (guile-sqlite3)[source]: Remove 'modules' and
'snippet'.  Use commit v0.1.0.
[arguments]: Remove.
 2018-06-27 16:58:59 +02:00
Kei Kebreau 2fee261331
gnu: rename: Update to 0.35. 
* gnu/packages/admin.scm (rename): Update to 0.35.
 2018-06-27 09:53:11 -04:00
Tobias Geerinckx-Rice e96ba83fae
gnu: python-scikit-learn: Return #t from phases. 
* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]:
Substitute INVOKE for SYSTEM*.
 2018-06-27 12:46:40 +02:00
Tobias Geerinckx-Rice 8448e6bfcf
gnu: dlib: Return #t from all phases. 
* gnu/packages/machine-learning.scm (dlib)[arguments]: Substitute INVOKE
for SYSTEM*. Return #t rather than undefined from phases.
 2018-06-27 12:46:40 +02:00
Tobias Geerinckx-Rice 3929f46c99
gnu: dlib: Fix tests. 
* gnu/packages/machine-learning.scm (dlib)[native-inputs]: Add libnsl.
 2018-06-27 12:46:40 +02:00
Tobias Geerinckx-Rice 3107259f05
gnu: ghmm: Return #t from all phases. 
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-06-27 12:46:39 +02:00
Tobias Geerinckx-Rice 3a28209c31
gnu: discount: Return #t from all phases. 
* gnu/packages/markup.scm (discount)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-27 12:46:39 +02:00
Tobias Geerinckx-Rice 6023fa366d
gnu: papagayo: Return #t from all phases. 
* gnu/packages/animation.scm (papagayo)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-06-27 12:46:39 +02:00
Tobias Geerinckx-Rice 6ac59f45ff
gnu: samba: Return #t from all phases. 
* gnu/packages/samba.scm (samba)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-27 12:46:31 +02:00
Tobias Geerinckx-Rice 55f0e9ccc5
gnu: cifs-utils: Return #t from all phases. 
* gnu/packages/samba.scm (cifs-utils)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-27 12:46:31 +02:00
Tobias Geerinckx-Rice e8e3c3577a
gnu: python-mpd2: Return #t from phases. 
* gnu/packages/mpd.scm (python-mpd2)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-27 12:46:30 +02:00
Tobias Geerinckx-Rice 9cbd819ab7
gnu: python-patsy: Return #t from phases. 
* gnu/packages/statistics.scm (python-patsy)[arguments]: Substitute
INVOKE for SYSTEM*.
 2018-06-27 12:46:30 +02:00
Tobias Geerinckx-Rice b44b14cd85
gnu: scm: Return #t from phases. 
* gnu/packages/scheme.scm (scm)[arguments]: Substitute INVOKE for
SYSTEM*. Return #t rather than undefined from phases.
 2018-06-27 12:46:30 +02:00
Tobias Geerinckx-Rice 2e14ca1982
gnu: slib: Return #t from phases. 
* gnu/packages/scheme.scm (slib)[arguments]: Substitute INVOKE for
SYSTEM*. Return #t rather than undefined from phases.
 2018-06-27 12:46:30 +02:00
Tobias Geerinckx-Rice b69819d8c2
gnu: scmutils: Return #t from all phases. 
* gnu/packages/scheme.scm (scmutils)[arguments]: Substitute INVOKE for
SYSTEM*. Return #t rather than undefined or #f from phases.
 2018-06-27 12:46:29 +02:00
Tobias Geerinckx-Rice 24674e6141
gnu: hop: Return #t from phases. 
* gnu/packages/scheme.scm (hop)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-27 12:46:29 +02:00
Tobias Geerinckx-Rice d9a7fab647
gnu: squeak-vm: Return #t from phases. 
* gnu/packages/smalltalk.scm (squeak-vm)[arguments]: Substitute INVOKE
for SYSTEM*. Return #t rather than undefined from phases.
 2018-06-27 12:46:29 +02:00
Tobias Geerinckx-Rice 5bad645159
gnu: java-jgit: Return #t from phases. 
* gnu/packages/version-control.scm (java-jgit)[arguments]: Substitute
INVOKE for SYSTEM*. Return #t rather than undefined from phases.
 2018-06-27 12:46:29 +02:00
Tobias Geerinckx-Rice 923e2d249e
gnu: aegis: Return #t from phases. 
* gnu/packages/version-control.scm (aegis)[arguments]: Substitute INVOKE
for SYSTEM*. Return #t rather than undefined from phases.
 2018-06-27 12:46:28 +02:00
Tobias Geerinckx-Rice 0b6be05e5e
gnu: aegis: Skip failing tests. 
* gnu/packages/version-control.scm (aegis)[arguments]: Disable some
failing tests that should otherwise cause build failures.
 2018-06-27 12:46:28 +02:00
Tobias Geerinckx-Rice a83d0c57b9
gnu: stgit: Return #t from phases. 
* gnu/packages/version-control.scm (stgit)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-06-27 12:46:28 +02:00
Tobias Geerinckx-Rice 0eb21fbaf7
gnu: cgit: Return #t from all phases. 
* gnu/packages/version-control.scm (cgit)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-06-27 12:46:28 +02:00
Tobias Geerinckx-Rice a15e4b160a
doc: Private key passphrases are not supported. 
* doc/guix.texi (Daemon Offload Setup): Note this.
 2018-06-27 12:46:27 +02:00
Tobias Geerinckx-Rice 13a29ba79f
gnu: inxi-minimal: Update to 3.0.13-1. 
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.13-1.
 2018-06-27 12:46:27 +02:00
Tobias Geerinckx-Rice a348af5012
gnu: python-webtest: Update to 2.0.30. 
* gnu/packages/python-web.scm (python-webtest): Update to 2.0.30.
 2018-06-27 12:46:27 +02:00
Ricardo Wurmus b7238c3d64
gnu: glusterfs: Update to 3.10.12. 
* gnu/packages/file-systems.scm (glusterfs): Update to 3.10.12.
 2018-06-27 12:10:08 +02:00
Rutger Helling f98c667989
gnu: xpra: Update to 2.3.2. 
* gnu/packages/xorg.scm (xpra): Update to 2.3.2.
 2018-06-27 12:00:45 +02:00
Rutger Helling f6f0e48637
gnu: shaderc: Disable tests. 
* gnu/packages/vulkan.scm (shaderc): Disable tests since they are
failing.
 2018-06-27 10:59:39 +02:00
Nicolas Goaziou bc1d26e39e
gnu: emacs-web-mode: Update to 16. 
* gnu/packages/emacs.scm (emacs-web-mode): Update to 16.
 2018-06-27 09:57:14 +02:00
Mark H Weaver 605e3345c3
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
Includes fixes for CVE-2018-12363, CVE-2018-12364, CVE-2018-12366, the
remaining 1 out of 2 changesets for CVE-2018-5156, and the remaining 7 out
of 17 changesets for CVE-2018-5188.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from
the upstream mozilla-esr52 repository.
* gnu/packages/patches/icecat-bug-1413868-pt1.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-06-27 01:08:53 -04:00
Mark H Weaver 018229734f
gnu: icecat: Relabel patches to reflect CVE assignments. 
Document that we include fixes for CVE-2018-6126, CVE-2018-12359,
CVE-2018-12360, CVE-2018-12362, CVE-2018-12365, 1 out of 2 changesets for
CVE-2018-5156, and 10 out of 17 changesets for CVE-2018-5188.

* gnu/packages/gnuzilla.scm (icecat)[source]: Relabel patches to reflect CVE
assignments.
 2018-06-27 01:08:46 -04:00
Vagrant Cascadian e64088f0b5
gnu: Add python-pyblake2. 
* gnu/packages/python-crypto.scm (python-pyblake2): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-06-26 23:52:36 +02:00
Vagrant Cascadian 7abe38262a
gnu: Add python-libusb1. 
* gnu/packages/libusb.scm (python-libusb1): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-06-26 23:52:36 +02:00
Marius Bakke 486406cc50
gnu: feh: Update to 2.26.4. 
* gnu/packages/image-viewers.scm (feh): Update to 2.26.4.
 2018-06-26 23:52:36 +02:00
Jan Nieuwenhuizen 8127a43cab
gnu: mescc-tools: Update to 0.5.1. 
* gnu/packages/mes.scm (mescc-tools): Update to 0.5.1.
 2018-06-26 23:15:53 +02:00
Fis Trivial f19b263078
gnu: Add beignet. 
* gnu/packages/opencl.scm (beignet): New variable.
* gnu/packages/patches/beignet-correct-file-names.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2018-06-26 23:01:16 +02:00
Fis Trivial 184a214bad
gnu: Add clinfo. 
* gnu/packages/opencl.scm (clinfo): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-06-26 23:01:16 +02:00