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Author SHA1 Message Date
Ricardo Wurmus 1ec1989f80
gnu: r-httpuv: Update to 1.4.5. 
* gnu/packages/web.scm (r-httpuv): Update to 1.4.5.
[native-inputs]: Add pkg-config.
 2018-09-05 20:03:05 +02:00
Ricardo Wurmus f077174178
gnu: r-scran: Update to 1.8.4. 
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.8.4.
 2018-09-05 20:03:05 +02:00
Ricardo Wurmus 8e44ff0c0d
gnu: r-scater: Update to 1.8.4. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.8.4.
 2018-09-05 20:03:05 +02:00
Ricardo Wurmus e69c07e61a
gnu: r-hdf5array: Update to 1.8.1. 
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.8.1.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 16527f1cbc
gnu: r-ggbio: Update to 1.28.5. 
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.28.5.
[propagated-inputs]: Add r-rlang.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 70daf9362b
gnu: r-biovizbase: Update to 1.28.2. 
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.28.2.
[propagated-inputs]: Add r-rlang.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus ff7c7d62f4
gnu: r-keggrest: Update to 1.20.1. 
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.20.1.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 3c55304688
gnu: r-edaseq: Update to 2.14.1. 
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.14.1.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus eb251fe524
gnu: r-igraph: Update to 1.2.2. 
* gnu/packages/graph.scm (r-igraph): Update to 1.2.2.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus c273bcdfce
gnu: r-diffusionmap: Update to 1.1-0.1. 
* gnu/packages/graph.scm (r-diffusionmap): Update to 1.1-0.1.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 6f6aef80e3
gnu: r-seurat: Update to 2.3.4. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.3.4.
[source]: Remove snippet.
[arguments]: Remove.
[native-inputs]: Remove.
[propagated-inputs]: Remove r-caret, r-diffusionmap, r-fnn, r-gdata, r-ranger,
r-stringr, r-tclust, and rvgam; add r-httr.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 07bd90ce90
gnu: r-msnbase: Update to 2.6.3. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.6.3.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 4ee8c37cca
gnu: r-maldiquant: Update to 1.18. 
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.18.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 48b21f8b6b
gnu: r-seqminer: Update to 6.1. 
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 6.1.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus ad2ed8d01f
gnu: r-genomicfeatures: Update to 1.32.2. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.32.2.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus f2e79823c6
gnu: r-rtracklayer: Update to 1.40.6. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.40.6.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus aea1b6fb8a
gnu: r-delayedarray: Update to 0.6.5. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.6.5.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 3e61c2a8b1
gnu: r-rsamtools: Update to 1.32.3. 
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.32.3.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus a02340058c
gnu: r-biocparallel: Update to 1.14.2. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.14.2.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 1d56c79f86
gnu: r-genomicranges: Update to 1.32.6. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.32.6.
 2018-09-05 20:03:04 +02:00
Ricardo Wurmus 688cb08527
gnu: r-limma: Update to 3.36.3. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.36.3.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 33a103a543
gnu: r-variantannotation: Update to 1.26.1. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.26.1.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 1adf4596a6
gnu: r-edger: Update to 3.22.3. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.22.3.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 5728d9c6c0
gnu: r-iranges: Update to 2.14.11. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.14.11.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 3c04375614
gnu: r-biocviews: Update to 1.48.3. 
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.48.3.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus ce0e762bf9
gnu: r-annotationforge: Update to 1.22.2. 
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.22.2.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 65050163e0
gnu: r-chippeakanno: Update to 3.14.1. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.1.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 88e4ed55d6
gnu: Add r-clipr. 
* gnu/packages/cran.scm (r-clipr): New variable.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 6a8469755c
gnu: Add r-rdpack. 
* gnu/packages/cran.scm (r-rdpack): New variable.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus dd954dd743
gnu: Add r-gbrd. 
* gnu/packages/cran.scm (r-gbrd): New variable.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 53718658d2
gnu: Add r-polynom. 
* gnu/packages/cran.scm (r-polynom): New variable.
 2018-09-05 20:03:03 +02:00
Ricardo Wurmus 356230da4a
gnu: Add r-fansi. 
* gnu/packages/cran.scm (r-fansi): New variable.
 2018-09-05 20:03:03 +02:00
Ludovic Courtès 3b0153bd82
gnu: guix-daemon: Add dependency on Guile-Gcrypt. 
This is a followup to 53166aec98, which
made Guile-Gcrypt a hard dependency.

* gnu/packages/package-management.scm (guix-daemon)[inputs]: Add
GUILE-GCRYPT.
 2018-09-05 15:48:04 +02:00
Ludovic Courtès 7903f00a74
gnu: cuirass: Add dependency on Guile-Gcrypt. 
This is a followup to 53166aec98, which
added a hard dependency of Guix on Guile-Gcrypt.

* gnu/packages/ci.scm (cuirass)[inputs]: Add GUILE-GCRYPT.
[arguments]: In 'wrap-program' phase, use 'string-join' to compute
'mods'.  Define 'objs' for use in GUILE_LOAD_COMPILED_PATH, and take
objects from lib/guile/X.Y/site-ccache.
 2018-09-05 15:35:54 +02:00
Ludovic Courtès 5e3082df1c
gnu: guile-fibers: Install .go files to "…/site-ccache". 
* gnu/packages/guile.scm (guile-fibers)[arguments]: New field.
 2018-09-05 15:35:54 +02:00
Eric Bavier 3f5e6ccf9b
slepc: Upgrade to 3.9.2. 
* gnu/packages/maths.scm (slepc): Upgrade to 3.9.2.
 2018-09-05 08:10:38 -05:00
Eric Bavier c15be1280e
petsc: Upgrade to 3.9.3. 
* gnu/packages/maths.scm (petsc): Upgrade to 3.9.3.
[arguments]: Remove unnecessary configure flags.
 2018-09-05 08:10:37 -05:00
Eric Bavier a3a99e27bb
petsc: Move example code to "examples" output. 
* gnu/packages/maths.scm (petsc)[arguments]: New 'move-examples' phase.
 2018-09-05 08:10:37 -05:00
Eric Bavier b26e4f26ff
gnu: Add SUNDIALS. 
* gnu/packages/maths.scm (sundials, sundials-openmpi): New variables.
 2018-09-05 08:10:31 -05:00
Alex Vong 296f091b48
gnu: packages: mp3: Use HTTPS where possible. 
* gnu/packages/mp3.scm (libmad)[home-page]: Use HTTPS.
(libid3tag)[home-page]: Likewise.
(mp3info)[source, home-page]: Likewise.
(mpg123)[source]: Likewise.
(libmpcdec)[source, home-page]: Likewise.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-05 20:56:55 +08:00
Alex Vong 998100e6e8
gnu: eyed3: Update home page. 
* gnu/packages/mp3.scm (eyed3)[home-page]: Update to redirected HTTPS URL.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-05 20:56:55 +08:00
Ludovic Courtès 53166aec98
gnu: guix: Update to 3d43017. 
* gnu/packages/package-management.scm (guix): Update to 3d43017.
 2018-09-05 14:31:48 +02:00
Ludovic Courtès 185948b8a8
gnu: xorg: Fix typo. 
* gnu/packages/xorg.scm: Fix typo in Benjamin's email address.
 2018-09-05 13:57:43 +02:00
Ricardo Wurmus 4fd2622df8
gnu: python-tables: Update to 3.4.4. 
* gnu/packages/python.scm (python-tables): Update to 3.4.4.
 2018-09-05 12:01:23 +02:00
Ricardo Wurmus 8afdeb8751
gnu: python-pybigwig: Update to 0.3.12. 
* gnu/packages/bioinformatics.scm (python-pybigwig): Update to 0.3.12.
[propagated-inputs]: Add python-numpy.
 2018-09-05 12:01:23 +02:00
Ricardo Wurmus 0d7974c376
gnu: libbigwig: Update to 0.4.2. 
* gnu/packages/bioinformatics.scm (libbigwig): Update to 0.4.2.
[source]: Fetch from git.
[arguments]: Disable tests; remove build phases "disable-curl-test" and
"create-target-dirs".
[native-inputs]: Add python-2.
 2018-09-05 12:01:23 +02:00
Ricardo Wurmus ca1dc4c76a
gnu: nss-pam-ldapd: Update to 0.9.10. 
* gnu/packages/openldap.scm (nss-pam-ldapd): Update to 0.9.10.
 2018-09-05 11:44:52 +02:00
Rutger Helling fefe17b088
gnu: dolphin-emu: Update to commit 5f0d825. 
* gnu/packages/emulators.scm (dolphin-emu): Update to commit 5f0d825.
 2018-09-05 10:23:20 +02:00
Leo Famulari fcf4841c0e
gnu: Zsh: Patch some tests that began failing in 5.6. 
* gnu/packages/shells.scm (zsh)[arguments]: Patch the tests rather than deleting
them.
 2018-09-04 18:34:01 -04:00
Leo Famulari 95681e5586
gnu: Zsh: Update to 5.6 [fixes CVE-2018-{0502,13259}]. 
* gnu/packages/shells.scm (zsh): Update to 5.6.
[arguments]: Skip some tests.
 2018-09-04 18:10:53 -04:00
Ludovic Courtès ca71942445
Switch to Guile-Gcrypt. 
This removes (guix hash) and (guix pk-crypto), which now live as part of
Guile-Gcrypt (version 0.1.0.)

* guix/gcrypt.scm, guix/hash.scm, guix/pk-crypto.scm,
tests/hash.scm, tests/pk-crypto.scm: Remove.
* configure.ac: Test for Guile-Gcrypt.  Remove LIBGCRYPT and
LIBGCRYPT_LIBDIR assignments.
* m4/guix.m4 (GUIX_ASSERT_LIBGCRYPT_USABLE): Remove.
* README: Add Guile-Gcrypt to the dependencies; move libgcrypt as
"required unless --disable-daemon".
* doc/guix.texi (Requirements): Likewise.
* gnu/packages/bash.scm, guix/derivations.scm, guix/docker.scm,
guix/git.scm, guix/http-client.scm, guix/import/cpan.scm,
guix/import/cran.scm, guix/import/crate.scm, guix/import/elpa.scm,
guix/import/gnu.scm, guix/import/hackage.scm,
guix/import/texlive.scm, guix/import/utils.scm, guix/nar.scm,
guix/pki.scm, guix/scripts/archive.scm,
guix/scripts/authenticate.scm, guix/scripts/download.scm,
guix/scripts/hash.scm, guix/scripts/pack.scm,
guix/scripts/publish.scm, guix/scripts/refresh.scm,
guix/scripts/substitute.scm, guix/store.scm,
guix/store/deduplication.scm, guix/tests.scm, tests/base32.scm,
tests/builders.scm, tests/challenge.scm, tests/cpan.scm,
tests/crate.scm, tests/derivations.scm, tests/gem.scm,
tests/nar.scm, tests/opam.scm, tests/pki.scm,
tests/publish.scm, tests/pypi.scm, tests/store-deduplication.scm,
tests/store.scm, tests/substitute.scm: Adjust imports.
* gnu/system/vm.scm: Likewise.
(guile-sqlite3&co): Rename to...
(gcrypt-sqlite3&co): ... this.  Add GUILE-GCRYPT.
(expression->derivation-in-linux-vm)[config]: Remove.
(iso9660-image)[config]: Remove.
(qemu-image)[config]: Remove.
(system-docker-image)[config]: Remove.
* guix/scripts/pack.scm: Adjust imports.
(guile-sqlite3&co): Rename to...
(gcrypt-sqlite3&co): ... this.  Add GUILE-GCRYPT.
(self-contained-tarball)[build]: Call 'make-config.scm' without
 #:libgcrypt argument.
(squashfs-image)[libgcrypt]: Remove.
[build]: Call 'make-config.scm' without #:libgcrypt.
(docker-image)[config, json]: Remove.
[build]: Add GUILE-GCRYPT to the extensions  Remove (guix config) from
the imported modules.
* guix/self.scm (specification->package): Remove "libgcrypt", add
"guile-gcrypt".
(compiled-guix): Remove #:libgcrypt.
[guile-gcrypt]: New variable.
[dependencies]: Add it.
[*core-modules*]: Remove #:libgcrypt from 'make-config.scm' call.
Add #:extensions.
[*config*]: Remove #:libgcrypt from 'make-config.scm' call.
(%dependency-variables): Remove %libgcrypt.
(make-config.scm): Remove #:libgcrypt.
* build-aux/build-self.scm (guile-gcrypt): New variable.
(make-config.scm): Remove #:libgcrypt.
(build-program)[fake-gcrypt-hash]: New variable.
Add (gcrypt hash) to the imported modules.  Adjust load path
assignments.
* gnu/packages/package-management.scm (guix)[propagated-inputs]: Add
GUILE-GCRYPT.
[arguments]: In 'wrap-program' phase, add GUILE-GCRYPT to the search
path.
 2018-09-04 17:25:11 +02:00
Alex Vong 1bf758767d
gnu: Add emacs-picpocket. 
* gnu/packages/emacs.scm (emacs-picpocket): New public variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-04 15:39:43 +02:00
Paul Garlick 71ca16b58d
gnu: petsc-openmpi: Configure with support for hdf5 data format. 
* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add
hdf5-parallel-openmpi.
[arguments]: Add '--with-hdf5-include' and '--with-hdf5-lib'
flags.  Add 'set-test-environment' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-04 15:22:48 +02:00
Jonathan Brielmaier b50658fe8a
gnu: kicad: Update to 5.0.0. 
* gnu/packages/engineering.scm (kicad): Update to 5.0.0.
[source]: Change from git to url-fetch.
[arguments]: Remove now unneeded build version parameter.
[inputs]: Add opencascade-oce.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-04 15:02:59 +02:00
Arun Isaac 906a396bff
gnu: ghc-zlib: Enable tests. 
* gnu/packages/haskell.scm (ghc-zlib)[arguments]: Enable tests. Allow building
with newer tasty.
[native-inputs]: Add ghc-quickcheck, ghc-tasty, ghc-tasty-hunit and
ghc-tasty-quickcheck.
 2018-09-04 17:31:09 +05:30
Arun Isaac 6300ba5b66
gnu: ghc-integer-logarithms: Allow building with newer tasty. 
* gnu/packages/haskell.scm (ghc-integer-logarithms)[arguments]: Allow building
with newer tasty.
 2018-09-04 15:24:32 +05:30
Arun Isaac 8374cc4b05
gnu: ghc-tasty-ant-xml: Update to 1.1.4. 
* gnu/packages/haskell-check.scm (ghc-tasty-ant-xml): Update to 1.1.4.
 2018-09-04 15:21:56 +05:30
Arun Isaac 3ad6b89090
gnu: ghc-tasty: Update to 1.1.0.3. 
* gnu/packages/haskell-check.scm (ghc-tasty): Update to 1.1.0.3.
[inputs]: Add ghc-wcwidth.
(ghc-attoparsec-bootstrap, ghc-integer-logarithms-bootstrap,
ghc-scientific-bootstrap): New variables.
(ghc-wcwidth)[inputs]: Replace ghc-attoparsec with ghc-attoparsec-bootstrap.
(ghc-scientific)[inputs]: Replace ghc-integer-logarithms with
ghc-integer-logarithms-bootstrap.
(ghc-attoparsec)[inputs]: Replace ghc-scientific with
ghc-scientific-bootstrap.
 2018-09-04 12:15:17 +05:30
Arun Isaac 9c4b522f15
gnu: Add ghc-wcwidth. 
* gnu/packages/haskell.scm (ghc-wcwidth): New variable.
 2018-09-04 12:15:10 +05:30
Ludovic Courtès fd95f37f36
Revert "gnu: perl: Add support for cross-compilation" 
This reverts commit 5108c18e7e, which was
accidentally committed.
 2018-09-03 23:49:12 +02:00
Raphaël Mélotte 5108c18e7e
gnu: perl: Add support for cross-compilation 
* gnu/packages/perl.scm (perl): use cross-libc when cross-compiling

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-03 23:41:08 +02:00
Benjamin Slade 38fe6449c0
gnu: Add transset-df. 
* gnu/packages/xorg.scm (transset-df): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-03 23:40:23 +02:00
Marius Bakke 65a58f3907
gnu: ppp: Use OpenSSL for cryptography. 
* gnu/packages/samba.scm (ppp)[source](patches): Add upstream patch.
[inputs]: Add OPENSSL.
[arguments]: Add substitution for OpenSSL headers.
 2018-09-03 19:25:28 +02:00
Marius Bakke 70dc8db8e7
Merge branch 'master' into core-updates 2018-09-03 19:20:06 +02:00
Marius Bakke c702749dfd
gnu: arpack-ng: Update to 3.6.2. 
* gnu/packages/maths.scm (arpack-ng): Update to 3.6.2.
 2018-09-03 19:09:01 +02:00
Marius Bakke 91bb495b85
gnu: arpack-ng: Drop redundant phase. 
* gnu/packages/maths.scm (arpack-ng)[arguments]: Remove.
 2018-09-03 19:09:01 +02:00
Marius Bakke 1f7d142000
gnu: python-matplotlib: Update to 2.2.3. 
* gnu/packages/python.scm (python-matplotlib): Update to 2.2.3.
 2018-09-03 19:09:00 +02:00
Marius Bakke cbd7c65709
gnu: ppp: Return #t from all phases. 
* gnu/packages/samba.scm (ppp)[arguments]: Return #t from phase.
 2018-09-03 18:58:47 +02:00
Marius Bakke 84aa18ff7f
gnu: re2: Update to 2018-09-01. 
* gnu/packages/regex.scm (re2): Update to 2018-09-01.
 2018-09-03 18:58:47 +02:00
Marius Bakke fcde1d27bb
gnu: openexr: Update to 2.3.0. 
* gnu/packages/graphics.scm (openexr): Update to 2.3.0.
[source](uri): Change to new download location.
[source](snippet): Remove workaround.
[source](patches): Remove.
* gnu/packages/patches/openexr-missing-samples.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-09-03 18:58:47 +02:00
Marius Bakke 1ae2c577a6
gnu: ilmbase: Update to 2.3.0. 
* gnu/packages/graphics.scm (ilmbase): Update to 2.3.0.
[source](uri): Change to new download location.
 2018-09-03 18:58:46 +02:00
Marius Bakke 9156206199
gnu: simplescreenrecorder: Build against modular Qt. 
* gnu/packages/video.scm (simplescreenrecorder)[inputs]: Remove QT.  Add
QTBASE and QTX11EXTRAS.
 2018-09-03 18:58:46 +02:00
Marius Bakke 65e686d6cb
Merge branch 'security-updates' 2018-09-03 18:58:20 +02:00
Efraim Flashner a5896da34e
gnu: gnu-pw-mgr: Update to 2.4.2. 
* gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 2.4.2.
 2018-09-03 19:34:24 +03:00
Tobias Geerinckx-Rice 38a8cd329d
gnu: python-nbxmpp: Update to 0.6.7. 
* gnu/packages/messaging.scm (python-nbxmpp): Update to 0.6.7.
 2018-09-03 18:21:43 +02:00
Tobias Geerinckx-Rice b619b7f67b
gnu: libircclient: Update to 1.10. 
* gnu/packages/messaging.scm (libircclient): Update to 1.10.
 2018-09-03 18:21:43 +02:00
Tobias Geerinckx-Rice cfcfc6ab62
Fix some typos. 
* doc/guix.texi (Sound Services, DNS Services): Fix typos.
* gnu/packages/cpp.scm (json-modern-cxx)[description]: Likewise.
* gnu/packages/emacs.scm (emacs-fancy-narrow)[synopsis, description]:
Likewise. Edit & mark up while we're here.
* gnu/packages/mail.scm (alot)[synopsis, description]: Ditto.
 2018-09-03 18:21:43 +02:00
Tobias Geerinckx-Rice fb458bf3bc
gnu: sudo: Update to 1.8.25. 
* gnu/packages/admin.scm (sudo): Update to 1.8.25.
 2018-09-03 18:21:42 +02:00
Efraim Flashner 0cc6447669
gnu: python-efl: Update to 1.21.0. 
* gnu/packages/enlightenment.scm (python-efl): Update to 1.21.0.
[source]: Don't use pypi source.
[arguments]: Delete network tests.
 2018-09-03 17:32:44 +03:00
Efraim Flashner 290bef39f6
gnu: efl: Update to 1.21.0. 
* gnu/packages/enlightenment.scm (efl): Update to 1.21.0.
 2018-09-03 17:32:44 +03:00
Ricardo Wurmus 02ddafef55
gnu: python-scipy: Disable broken tests. 
* gnu/packages/python.scm (python-scipy)[arguments]: Skip two broken tests.
 2018-09-03 13:49:32 +02:00
Rutger Helling 26baaaf49b
gnu: c-toxcore: Update to 0.2.7. 
* gnu/packages/messaging.scm (c-toxcore): Update to 0.2.7.
 2018-09-03 08:22:51 +02:00
Rutger Helling aa613d71ec
gnu: openrct2: Update to 0.2.1. 
* gnu/packages/games.scm (openrct2-objects): Update to 1.0.6.
* gnu/packages/games.scm (openrct2): Update to 0.2.1.
 2018-09-03 08:22:50 +02:00
Efraim Flashner 647465ace9
gnu: jellyfish: Update to 2.2.10. 
* gnu/packages/bioinformatics.scm (jellyfish): Update to 2.2.10.
[supported-systems]: Add aarch64-linux, mips64el-linux.
 2018-09-03 08:32:33 +03:00
Oleg Pykhalov 3910977823
gnu: monitoring.scm: Fix copyright line. 
This is a follow-up to ead46692ec.
 2018-09-02 19:18:16 +03:00
Alex Vong 2bd6ed9e4c
gnu: haskell-mode: Fix test failure. 
Fixes <https://bugs.gnu.org/31726>.

Thanks to Jack Hill <jackhill@jackhill.us> for exploring different solutions
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=31726>.

* gnu/packages/patches/haskell-mode-unused-variables.patch,
gnu/packages/patches/haskell-mode-make-check.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/emacs.scm (haskell-mode)[source]: Use them.
[arguments]: Adjust 'pre-build' phase to embed file name.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-02 17:06:43 +02:00
Konrad Hinsen b21a55a9f2
gnu: emacs-helpful: Update to 0.13. 
* gnu/packages/emacs.scm (emacs-helpful): Update to 0.13.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-02 16:58:06 +02:00
Konrad Hinsen 351b6463af
gnu: emacs-elisp-refs: Update to 1.3. 
* gnu/packages/emacs.scm (emacs-elisp-refs): Update to 1.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-09-02 16:56:22 +02:00
Ludovic Courtès fe634eaf93
Add (guix describe) and use it to initialize '%package-search-path'. 
* guix/describe.scm: New file.
* Makefile.am (MODULES): Add it.
* gnu/packages.scm (%default-package-module-path): New variable.
(%package-module-path): Honor 'package-path-entries'.
* build-aux/update-NEWS.scm (main): Use %DEFAULT-PACKAGE-MODULE-PATH
instead of (last (%package-module-path)).
 2018-09-02 16:43:10 +02:00
Rutger Helling 87284c6b48
gnu: wine-staging: Update to 3.15. 
* gnu/packages/wine.scm (wine-staging): Update to 3.15.
 2018-09-02 08:53:03 +02:00
Rutger Helling ab2e38e206
gnu: wine-staging-patchset-data: Update to 3.15. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 3.15.
 2018-09-02 08:53:03 +02:00
宋文武 9bf98520f2
gnu: rosegarden: Update to 18.06. 
* gnu/packages/music.scm (rosegarden): Update to 18.06.
[home-page]: Use HTTPS.
 2018-09-02 13:18:28 +08:00
Danny Milosavljevic 24d298b459
gnu: rust: Move rust-1.19 down. 2018-09-02 00:22:53 +02:00
Danny Milosavljevic 3159ef7c99
gnu: rust: Bootstrap (only) Rust 1.19.0 by mrustc. 
* gnu/packages/patches/rust-1.19-mrustc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust-1.19)[source]: Add patch
"rust-1.19-mrustc.patch".
[arguments]<#:modules>: New field.
<#:phases>[patch-cargo-tomls]: New phase.
<#:phases>[build]: Modify.
<#:phases>[install]: Modify.
[native-inputs]: Replace rust-bootstrap by mrustc.
(rust-1.23)[native-inputs]: New field.
[arguments]<#:phases>: Delete phase "patch-cargo-tomls".
 2018-09-02 00:09:34 +02:00
Manuel Graf a0a273c1ee
gnu: Add perftest. 
* gnu/packages/linux.scm (perftest): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-09-01 17:51:29 -04:00
Julien Lepiller 37a0f47073
gnu: Add ruby-jekyll-paginate-v2. 
* gnu/packages/ruby.scm (ruby-jekyll-paginate-v2): New variable.
 2018-09-01 23:09:14 +02:00
Julien Lepiller 49e1dde53f
gnu: Add jekyll. 
* gnu/packages/ruby.scm (jekyll): New variable.
 2018-09-01 23:09:09 +02:00
Julien Lepiller 3729611379
gnu: Add ruby-pathutil. 
* gnu/packages/ruby.scm (ruby-pathutil): New variable.
 2018-09-01 23:09:06 +02:00
Julien Lepiller 49395112c4
gnu: Add ruby-forwardable-extended. 
* gnu/packages/ruby.scm (ruby-forwardable-extended): New variable.
 2018-09-01 23:09:04 +02:00
Julien Lepiller a13d451e18
gnu: Add ruby-liquid. 
* gnu/packages/ruby.scm (ruby-liquid): New variable.
 2018-09-01 23:09:02 +02:00
Julien Lepiller f1ec4d7611
gnu: Add ruby-mercenary. 
* gnu/packages/ruby.scm (ruby-mercenary): New variable.
 2018-09-01 23:09:00 +02:00
Julien Lepiller f8ae2ee528
gnu: Add ruby-safe-yaml. 
* gnu/packages/ruby.scm (ruby-safe-yaml): New variable.
 2018-09-01 23:08:58 +02:00
Julien Lepiller 73bfc125ef
gnu: Add ruby-heredoc-unindent. 
* gnu/packages/ruby.scm (ruby-heredoc-unindent): New variable.
 2018-09-01 23:08:56 +02:00
Julien Lepiller 2e072e37aa
gnu: Add ruby-hashie. 
* gnu/packages/ruby.scm (ruby-hashie): New variable.
 2018-09-01 23:08:55 +02:00
Julien Lepiller 2c5028bd97
gnu: Add ruby-rouge-2. 
* gnu/packages/ruby.scm (ruby-rouge-2): New variable.
 2018-09-01 23:08:53 +02:00
Julien Lepiller 4ce0414bca
gnu: Add ruby-rouge. 
* gnu/packages/ruby.scm (ruby-rouge): New variable.
 2018-09-01 23:08:46 +02:00
Julien Lepiller 5e2f74bdb8
gnu: Add ruby-em-websocket. 
* gnu/packages/ruby.scm (ruby-em-websocket): New variable.
 2018-09-01 23:08:44 +02:00
Julien Lepiller fa0063bcf4
gnu: Add ruby-http-parser.rb. 
* gnu/packages/ruby.scm (ruby-http-parser.rb): New variable.
 2018-09-01 23:08:42 +02:00
Julien Lepiller 0312706955
gnu: Add ruby-kramdown. 
* gnu/packages/ruby.scm (ruby-kramdown): New variable.
 2018-09-01 23:08:40 +02:00
Julien Lepiller 197ca8ecd2
gnu: Add ruby-prawn-table. 
* gnu/packages/ruby.scm (ruby-prawn-table): New variable.
 2018-09-01 23:08:38 +02:00
Julien Lepiller 7ad8dd086c
gnu: Add ruby-prawn. 
* gnu/packages/ruby.scm (ruby-prawn): New variable.
 2018-09-01 23:08:36 +02:00
Julien Lepiller 37fbced73c
gnu: Add ruby-yard. 
* gnu/packages/ruby.scm (ruby-yard): New variable.
 2018-09-01 23:08:34 +02:00
Julien Lepiller 770e3b535e
gnu: Add ruby-pdf-core. 
* gnu/packages/ruby.scm (ruby-pdf-core): New variable.
 2018-09-01 23:08:31 +02:00
Julien Lepiller 461fb8598e
gnu: Add ruby-pdf-inspector. 
* gnu/packages/ruby.scm (ruby-pdf-inspector): New variable.
 2018-09-01 23:08:29 +02:00
Julien Lepiller abbe629c6a
gnu: Add ruby-pdf-reader. 
* gnu/packages/ruby.scm (ruby-pdf-reader): New variable.
 2018-09-01 23:08:27 +02:00
Julien Lepiller 00d71efca6
gnu: Add ruby-morecane. 
* gnu/packages/ruby.scm (ruby-morecane): New variable.
 2018-09-01 23:08:10 +02:00
Julien Lepiller 83d9f67221
gnu: Add ruby-cane. 
* gnu/packages/ruby.scm (ruby-cane): New variable.
 2018-09-01 23:08:06 +02:00
Julien Lepiller 3224a5a84a
gnu: Add ruby-parallel. 
* gnu/packages/ruby.scm (ruby-parallel): New variable.
 2018-09-01 23:08:04 +02:00
Julien Lepiller ceac6f6f5b
gnu: Add ruby-jekyll-watch. 
* gnu/packages/ruby.scm (ruby-jekyll-watch): New variable.
 2018-09-01 23:08:02 +02:00
Julien Lepiller 88ed727fc5
gnu: Add ruby-listen-3.0. 
* gnu/packages/ruby.scm (ruby-listen-3.0): New variable.
 2018-09-01 23:08:00 +02:00
Julien Lepiller 5e242cb44c
gnu: Add ruby-jekyll-sass-converter. 
* gnu/packages/ruby.scm (ruby-jekyll-sass-converter): New variable.
 2018-09-01 23:07:58 +02:00
Julien Lepiller f00f449223
gnu: Add ruby-sass. 
* gnu/packages/ruby.scm (ruby-sass): New variable.
 2018-09-01 23:07:56 +02:00
Julien Lepiller 6456beef01
gnu: Add ruby-sass-spec. 
* gnu/packages/ruby.scm (ruby-sass-spec): New variable.
 2018-09-01 23:07:54 +02:00
Julien Lepiller ddc3a66798
gnu: Add ruby-diffy. 
* gnu/packages/ruby.scm (ruby-diffy): New variable.
 2018-09-01 23:07:52 +02:00
Julien Lepiller 0c8eedc153
gnu: Add ruby-terminfo. 
* gnu/packages/ruby.scm (ruby-terminfo): New variable.
 2018-09-01 23:07:50 +02:00
Julien Lepiller 18077ffc46
gnu: Add ruby-sass-listen. 
* gnu/packages/ruby.scm (ruby-sass-listen): New variable.
 2018-09-01 23:07:48 +02:00
Julien Lepiller 6bba8ecf7b
gnu: Add ruby-rdoc. 
* gnu/packages/ruby.scm (ruby-rdoc): New variable.
 2018-09-01 23:07:46 +02:00
Julien Lepiller f22c038799
gnu: Add ruby-command-line-reporter-3. 
* gnu/packages/ruby.scm (ruby-command-line-reporter-3): New variable.
 2018-09-01 23:07:44 +02:00
Julien Lepiller 78b9c291f6
gnu: Add ruby-command-line-reporter. 
* gnu/packages/ruby.scm (ruby-command-line-reporter): New variable.
 2018-09-01 23:07:42 +02:00
Julien Lepiller 9c7f15c048
gnu: Add ruby-colorator. 
* gnu/packages/ruby.scm (ruby-colorator): New variable.
 2018-09-01 23:07:39 +02:00
Julien Lepiller 6f2c4efb56
gnu: Add ruby-addressable. 
* gnu/package/ruby.scm (ruby-addressable): New variable.
 2018-09-01 23:07:37 +02:00
Julien Lepiller 0d16905b60
gnu: Add ruby-public-suffix. 
* gnu/packages/ruby.scm (ruby-public-suffix): New variable.
 2018-09-01 23:07:35 +02:00
Julien Lepiller afb7a3e8d5
gnu: ruby-ttfunk: Update to 1.5.1. 
* gnu/packages/ruby.scm (ruby-ttfunk): Update to 1.5.1.
 2018-09-01 23:07:32 +02:00
Julien Lepiller ef381322d5
gnu: ruby-activesupport: Update to 5.2.1. 
* gnu/packages/ruby.scm (ruby-activesupport): Update to 5.2.1.
 2018-09-01 23:07:30 +02:00
Julien Lepiller cbb50182ad
gnu: ruby-i18n: Update to 1.1.0. 
* gnu/packages/ruby.scm (ruby-i18n): Update to 1.1.0.
 2018-09-01 23:07:28 +02:00
Julien Lepiller 352b5d7e74
gnu: Add ruby-concurrent. 
* gnu/packages/ruby.scm (ruby-concurrent): New variable.
 2018-09-01 23:07:06 +02:00
Oleg Pykhalov ead46692ec
gnu: Add zabbix-agentd and zabbix-server. 
* gnu/packages/monitoring.scm (zabbix-agentd, zabbix-server): New variables.
 2018-09-01 19:01:36 +03:00
Marius Bakke e59588482b
gnu: nss, nss-certs: Update to 3.39 [fixes CVE-2018-12384]. 
* gnu/packages/gnuzilla.scm (nss): Update to 3.39.
* gnu/packages/certs.scm (nss-certs): Likewise.
 2018-09-01 13:26:13 +02:00
Marius Bakke 7ea90c217f
gnu: nspr: Update to 4.20. 
* gnu/packages/gnuzilla.scm (nspr): Update to 4.20.
 2018-09-01 13:23:39 +02:00
Marius Bakke 279ed3efee
gnu: qtbase: Fix build with glibc >= 2.28. 
* gnu/packages/patches/qtbase-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase)[source](patches): Use it.
[arguments]: Remove "--no-feature-renameat2" from #:configure-flags.
 2018-09-01 13:00:01 +02:00
Marius Bakke 53b7c9716e
gnu: python-waf: Update to 2.0.10. 
* gnu/packages/python.scm (python-waf): Update to 2.0.10.
 2018-09-01 12:59:00 +02:00
Marius Bakke 3469a5ea47
gnu: gcc@4.9: Fix FTBFS with Glibc >= 2.28. 
* gnu/packages/commencement.scm (gcc-for-libstdc++): New variable.
(libstdc++-boot0): Inherit from GCC-FOR-LIBSTDC++ instead of GCC-4.9.
* gnu/packages/gcc.scm (gcc-4.9)[source](patches): Add
"gcc-4.9-libsanitizer-ustat.patch".
* gnu/packages/patches/gcc-4.9-libsanitizer-ustat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-09-01 12:58:47 +02:00
Marius Bakke a446cf26d7
gnu: texinfo@5: Fix FTBFS with Perl >= 5.28. 
* gnu/packages/patches/texinfo-5-perl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/texinfo.scm (texinfo-5)[source](patches): New field.
 2018-09-01 12:56:52 +02:00
Leo Famulari ea59f0487b
gnu: Remove Krita 3. 
Krita 3 fails to build with Qt 5.11.1. Since it's also unmaintained upstream,
remove it.

* gnu/packages/kde.scm (krita-3): Remove variable.
 2018-09-01 02:09:53 -04:00
Leo Famulari fd67d793c2
gnu: Krita: Build with libraw 0.18. 
Fixes <https://bugs.gnu.org/32467>.

Reported by Björn Höfling <bjoern.hoefling@bjoernhoefling.de>.

* gnu/packages/photo.scm (libraw-0.18): New variable.
* gnu/packages/kde.scm (krita)[inputs]: Use libraw-0.18.
 2018-09-01 02:09:52 -04:00
Leo Famulari 7ce9eaf013
gnu: Krita: Update to 4.1.1. 
* gnu/packages/kde.scm (krita): Update to 4.1.1.
 2018-09-01 02:09:52 -04:00
Leo Famulari d84a887a5f
gnu: libksysguard: Update to 5.13.4. 
* gnu/packages/kde.scm (libksysguard): Update to 5.13.4.
 2018-09-01 02:09:52 -04:00
Leo Famulari 600f1ad8e6
gnu: KDE: Update to 5.49.0. 
Fixes <https://bugs.gnu.org/32013>.

* gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, breeze-icons,
extra-cmake-modules, kactivities, kactivities-stats, kapidox, karchive, kauth,
kbookmarks, kcmutils, kcodecs, kcompletion, kconfig, kconfigwidgets,
kcoreaddons, kcrash, kdbusaddons, kde-framework-integration, kdeclarative, kded,
kdesignerplugin, kdesu, kdewebkit, kdnssd, kdoctools, kemoticons, kfilemetadata,
kglobalaccel, kguiaddons, ki18n, kiconthemes, kidletime, kimageformats, kinit,
kio, kirigami, kitemmodels, kitemview, kjobwidgets, knewstuff, knotification,
knotifyconfig, kpackage, kparts, kpeople, kplotting, kpty, krunner, kservice,
ksyntaxhighlighting, ktexteditor, ktextwidgets, kunitcoversion, kwallet,
kwayland, kwidgetsaddons, kwindowsystem, kxmlgui, kxmlrpcclient,
modemmanager-qt, networkmanager-qt, oxygen-icons, plasma-framework, prison,
qqc2-desktop-style, solid, sonnet, threadweaver): Update to 5.49.0.
(extra-cmake-modules)[arguments]: Remove obsolete workaround.
(attica)[arguments]: Disable some new tests.

Co-authored-by: Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
 2018-09-01 02:09:49 -04:00
Eric Bavier 220458b098
gnu: hypre: Update to 2.14.0. 
* gnu/packages/maths.scm (hypre): Update to 2.14.0
 2018-08-31 10:08:00 -05:00
Ricardo Wurmus 9ce2f07ab6
gnu: python-matplotlib: Use python-pyqt-without-qtwebkit. 
* gnu/packages/python.scm (python-matplotlib)[propagated-inputs]: Replace
python-pyqt with python-pyqt-without-qtwebkit.
 2018-08-31 16:37:56 +02:00
Ricardo Wurmus 0e2d6d2698
gnu: Add python-pyqt-without-qtwebkit. 
* gnu/packages/qt.scm (python-pyqt-without-qtwebkit): New variable.
 2018-08-31 16:37:56 +02:00
Clément Lassieur 9fc2922794
services: nginx: Get the Shepherd to respawn NGINX. 
* gnu/services/web.scm (nginx-shepherd-service): Change 'start' (that is, all
actions that don't send a signal to the master process) to return the PID.
Wait until the PID file is created and contains an integer because it might be
created after the parent process exits.
 2018-08-31 16:35:39 +02:00
Rutger Helling 0b6678cd44
gnu: retroarch: Update to 1.7.4. 
* gnu/packages/emulators.scm (retroarch): Update to 1.7.4.
 2018-08-31 08:25:45 +02:00
Nicolas Goaziou be4c63f484
gnu: mame: Update to 0.201. 
* gnu/packages/emulators.scm (mame): Update to 0.201.
[arguments]: Remove unnecessary fix.
 2018-08-31 07:04:17 +02:00
Tobias Geerinckx-Rice 0c048c11a4
gnu: cmocka: Update to 1.1.2. 
* gnu/packages/check.scm (cmocka): Update to 1.1.2.
 2018-08-30 19:29:08 +02:00
Tobias Geerinckx-Rice 8a68b71d99
gnu: keyutils: Update to 1.5.11. 
* gnu/packages/crypto.scm (keyutils): Update to 1.5.11.
[inputs]: Add mit-krb5.
 2018-08-30 19:28:11 +02:00
Tobias Geerinckx-Rice d6d9ca1017
gnu: Don't use unstable tarballs in (packages opencl). 
* gnu/packages/opencl.scm (opencl-clhpp, clinfo, beignet, pocl)
[source]: Use GIT-FETCH and GIT-FILE-NAME.
(pocl)[arguments]: Remove ‘remove-headers’ phase.
(make-opencl-headers)[source]: Use GIT-FILE-NAME.
 2018-08-30 19:28:11 +02:00
Tobias Geerinckx-Rice 8294362688
gnu: Add pipewalker. 
* gnu/packages/games.scm (pipewalker): New public variable.
 2018-08-30 19:28:11 +02:00
Tobias Geerinckx-Rice 6e8c75b884
gnu: Add msr-tools. 
* gnu/packages/hardware.scm (msr-tools): New public variable.
 2018-08-30 19:28:10 +02:00
Tobias Geerinckx-Rice aadd1d241c
gnu: Add ddcutil. 
* gnu/packages/hardware.scm: New file.
(ddcutil): New public variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add the new file.
 2018-08-30 19:28:10 +02:00
Marius Bakke 7693f678d1
gnu: pango: Replace with 1.42.4. 
Fixes <https://bugs.gnu.org/32594>.

* gnu/packages/gtk.scm (pango)[replacement]: New field.
(pango-1.42.4): New public variable.
 2018-08-30 18:57:10 +02:00
Marius Bakke 883832b480
gnu: appstream-glib: Update to 0.7.12. 
* gnu/packages/glib.scm (appstream-glib): Update to 0.7.12.
 2018-08-30 18:44:57 +02:00
Marius Bakke 4c13cb36f8
gnu: GnuPG: Update to 2.2.10. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.10.
 2018-08-30 18:44:57 +02:00
Marius Bakke e50c727878
gnu: rng-tools: Update to 6.4. 
* gnu/packages/linux.scm (rng-tools): Update to 6.4.
 2018-08-30 18:44:57 +02:00
Marius Bakke d3c1075c14
gnu: samba: Update to 4.8.5. 
* gnu/packages/samba.scm (samba): Update to 4.8.5.
 2018-08-30 18:44:57 +02:00
Marius Bakke 652940d060
gnu: ldb: Update to 1.3.6. 
* gnu/packages/samba.scm (ldb): Update to 1.3.6.
 2018-08-30 18:44:57 +02:00
Marius Bakke 99088aa751
gnu: p11-kit: Update to 0.23.14. 
* gnu/packages/tls.scm (p11-kit): Update to 0.23.14.
 2018-08-30 18:44:56 +02:00
Marius Bakke 471884ed11
gnu: lilv: Propagate LV2. 
* gnu/packages/audio.scm (lilv)[propagated-inputs]: Add LV2.
[inputs]: Remove.
 2018-08-30 18:44:51 +02:00
Oleg Pykhalov b5d1286f2d
gnu: net-snmp: Specify '--with-openssl' configuration flag. 
* gnu/packages/networking.scm (net-snmp)[arguments]: Add '--with-openssl'
flag.
 2018-08-30 14:46:15 +03:00
Eric Bavier f9e140a243
netsurf: Upgrade to 3.8. 
* gnu/packages/patches/netsurf-message-timestamp.patch: New patch.
* gnu/packages/patches/netsurf-system-utf8proc.patch: Adjust to new source.
* gnu/packages/web.scm (netsurf): Upgrade to 3.8.
[source]: Add the new patch.
 2018-08-30 00:44:40 -05:00
Eric Bavier c558113fb9
nsgenbind: Upgrade to 0.6. 
* gnu/packages/web.scm (nsgenbind): Upgrade to 0.6.
 2018-08-30 00:44:40 -05:00
Eric Bavier 1be7077572
libnspsl: Upgrade to 0.1.3. 
* gnu/packages/web.scm (libnspsl): Upgrade to 0.1.3.
 2018-08-30 00:44:40 -05:00
Eric Bavier 3e1035d738
libnsutils: Upgrade to 0.0.5. 
* gnu/packages/web.scm (libnsutils): Upgrade to 0.0.5.
 2018-08-30 00:44:40 -05:00
Eric Bavier 1dc02e727b
libnsgif: Upgrade to 0.2.1. 
* gnu/packages/web.scm (libnsgif): Upgrade to 0.2.1.
 2018-08-30 00:44:39 -05:00
Eric Bavier ef2198ac5b
libnsbmp: Upgrade to 0.1.5. 
* gnu/packages/web.scm (libnsbmp): Upgrade to 0.1.5.
 2018-08-30 00:44:39 -05:00
Eric Bavier bb38628fab
libsvgtiny: Upgrade to 0.1.7. 
* gnu/packages/web.scm (libsvgtiny): Upgrade to 0.1.7.
 2018-08-30 00:44:39 -05:00
Eric Bavier f8311c0fee
libdom: Upgrade to 0.3.3. 
* gnu/packages/web.scm (libdom): Upgrade to 0.3.3.
 2018-08-30 00:44:39 -05:00
Eric Bavier 2bb1752b7d
libcss: Upgrade to 0.8.0. 
* gnu/packages/web.scm (libcss): Upgrade to 0.8.0.
 2018-08-30 00:44:39 -05:00
Eric Bavier 60e411fc94
libwapcaplet: Upgrade to 0.4.1. 
* gnu/packages/web.scm (libwapcaplet): Upgrade to 0.4.1.
 2018-08-30 00:44:39 -05:00
Eric Bavier b06bf74b41
hubbub: Upgrade to 0.3.5. 
* gnu/packages/web.scm (hubbub): Upgrade to 0.3.5.
 2018-08-30 00:44:39 -05:00
Eric Bavier ea9b34c2f5
libparserutils: Upgrade to 0.2.4. 
* gnu/packages/web.scm (libparserutils): Upgrade to 0.2.4.
 2018-08-30 00:44:38 -05:00
Eric Bavier fa4131f2aa
netsurf-buildsystem: Upgrade to 1.7. 
* gnu/packages/web.scm (netsurf-buildsystem): Upgrade to 1.7.
 2018-08-30 00:44:33 -05:00
Mark H Weaver a28604ee81
gnu: linux-libre@4.4: Update to 4.4.153. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.153.
 2018-08-30 00:53:01 -04:00
Tobias Geerinckx-Rice 9986316618
gnu: mujs: Update to 1.0.4. 
* gnu/packages/javascript.scm (mujs): Update to 1.0.4.
 2018-08-30 04:42:54 +02:00
Tobias Geerinckx-Rice bfb994d8be
gnu: r-car: Update to 3.0-2. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-2.
 2018-08-30 04:42:52 +02:00
Tobias Geerinckx-Rice ad3306f62f
gnu: perl-gd: Update to 2.69. 
* gnu/packages/gd.scm (perl-gd): Update to 2.69.
 2018-08-30 04:42:51 +02:00
Tobias Geerinckx-Rice 33eea5c439
gnu: perl-sub-identify: Update to 0.14. 
* gnu/packages/perl.scm (perl-sub-identify): Update to 0.14.
 2018-08-30 04:42:51 +02:00
Tobias Geerinckx-Rice a82b561fef
gnu: robocut: Don't use unstable tarball. 
* gnu/packages/printers.scm (robocut)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-08-30 04:42:38 +02:00
Tobias Geerinckx-Rice 1f0f9514eb
gnu: gparted: Update to 0.32.0. 
* gnu/packages/disk.scm (gparted): Update to 0.32.0.
 2018-08-30 04:40:31 +02:00
Tobias Geerinckx-Rice 7bb7920f64
gnu: duplicity: Update to 0.7.18.1. 
* gnu/packages/backup.scm (duplicity): Update to 0.7.18.1.
[arguments]: Remove upstreamed '--ignore-mdc-error' kluge.
Rename 'patch-source' phase to 'use-store-file-names'.
 2018-08-30 03:51:00 +02:00
Kei Kebreau 99e0fb24fb
gnu: audacity: Fix GtkFileChooserDialog. 
* gnu/packages/audio.scm (audacity)[arguments]: Add 'wrap-program' phase to fix
GtkFileChooserDialog.
[inputs]: Rename "gtk" to "gtk+".
 2018-08-29 20:56:35 -04:00
Tobias Geerinckx-Rice 16de7f15cb
gnu: snappy: Optimise. 
* gnu/packages/compression.scm (snappy)[source]: Build with ‘-O2’.
* gnu/package/patches/snappy-add-O2-flag-in-CmakeLists.txt.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-08-30 00:51:11 +02:00
Oleg Pykhalov 8490a8346b
services: Add ddclient service. 
* gnu/services/dns.scm (ddclient-configuration, ddclient-service-type): New
variables.
(uglify-field-name, serialize-field, serialize-boolean, serialize-integer,
serialize-string, serialize-list, serialize-extra-options,
ddclient-activation, ddclient-shepherd-service,
generate-ddclient-documentation): New procedures.
* doc/guix.texi (DNS Services): Document it.
 2018-08-30 01:19:47 +03:00
Ludovic Courtès 4db7a9dc66
linux-modules: Raise an error when a kernel module cannot be found. 
Previously we'd get an unhelpful backtrace like this:

  In gnu/build/linux-modules.scm:
     184:47  4 (recursive-module-dependencies _ #:lookup-module _)
      98:14  3 (module-dependencies _)
      85:18  2 (modinfo-section-contents _)
  In ice-9/ports.scm:
     439:11  1 (call-with-input-file #f #<procedure get-bytevector-al?> ?)
  In unknown file:
	     0 (open-file #f "r" #:encoding #f #:guess-encoding #f)

  ERROR: In procedure open-file:
  Wrong type (expecting string): #f
  builder for `/gnu/store/…-linux-modules.drv' failed with exit code 1

* gnu/build/linux-modules.scm (find-module-file): When MODULE cannot be
found, raise an error instead of returning #f.  This is more useful to
the user.
 2018-08-29 23:32:01 +02:00
Ludovic Courtès d258c79144
tests: Warn about test module load failures. 
Reported by Clément Lassieur <clement@lassieur.org>
and Leo Famulari <leo@famulari.name> at
<https://debbugs.gnu.org/cgi/bugreport.cgi?bug=32545#11>.

* gnu/tests.scm (test-modules): Pass #:warn to 'scheme-modules'.
 2018-08-29 23:32:01 +02:00
Christopher Lemmer Webber caf8a003b3
gnu: emacs-racket-mode: Update to commit 92c3348. 
* gnu/packages/emacs.scm (emacs-racket-mode): Update to commit 92c3348.
 2018-08-29 15:52:20 -04:00
Vagrant Cascadian b4c698c8c9
gnu: python-trezor: Update to 0.10.2. 
* gnu/packages/finance.scm (python-trezor): Update to 0.10.2.
[arguments]: Replace check with tests that do not require hardware device.
[propagated-inputs]: Add python-click, python-libusb1, python-pyblake2 and
python-typing.
[native-inputs]: Add python-mock and python-pytest.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-29 14:52:56 -04:00
pimi 4f9355c360
gnu: Add gffcompare. 
gnu/packages/bioinformatics.scm (gffcompare): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-29 14:13:49 -04:00
pimi 9e21f2170e
gnu: Add r-abcoptim. 
gnu/packages/cran.scm (r-abcoptim): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-29 14:13:46 -04:00
Danny Milosavljevic 15c56e8273
gnu: Add solaar. 
* gnu/packages/admin.scm (solaar): New variable.
 2018-08-29 17:18:30 +02:00