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Author SHA1 Message Date
Roel Janssen cbe1314a7e
gnu: Update r-minimal to 3.4.3. 
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.3.
 2017-11-30 12:50:23 +01:00
Marius Bakke 2dd12924cf
Merge branch 'master' into core-updates 2017-11-19 15:01:00 +01:00
Ricardo Wurmus 33dc54b08c
gnu: Move date/time packages from python.scm to time.scm. 
* gnu/packages/python.scm (python-pytz, python2-pytz, python-dateutil,
python2-dateutil, python-parsedatetime, python2-parsedatetime,
python-tzlocal, python-isodate, python2-isodate, python-iso8601,
python2-iso8601, python-monotonic, python2-monotonic, python-pyrfc3339,
python2-pyrfc3339, python-arrow, python2-arrow, python-aniso8601,
python2-aniso8601): Move from here...
* gnu/packages/time.scm: ...to here.
* gnu/packages/calendar.scm,
gnu/packages/check.scm,
gnu/packages/django.scm,
gnu/packages/ebook.scm,
gnu/packages/gnome.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/mail.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/rdf.scm,
gnu/packages/statistics.scm,
gnu/packages/tls.scm,
gnu/packages/tryton.scm,
gnu/packages/version-control.scm: Adjust accordingly.
 2017-11-18 12:45:19 +01:00
Ricardo Wurmus 9ef9c6489f
gnu: Remove duplicates from (gnu packages statistics). 
* gnu/packages/statistics.scm (r-cluster, r-codetools, r-kernsmooth): Remove
duplicates.
 2017-11-18 11:18:39 +01:00
Ricardo Wurmus ac257f127a
gnu: Move testing packages from python.scm to check.scm. 
* gnu/packages/python.scm (python-behave-web-api, python2-behave-web-api,
python-mock, python2-mock, python-mock-2, python-nose, python2-nose,
python-nose2, python2-nose2, python-unittest2, python2-unittest2,
python-pytest, python2-pytest, python-pytest-3.0, python2-pytest-3.0,
python-pytest-cov, python2-pytest-cov, python-pytest-runner,
python2-pytest-runner, python-pytest-mock, python2-pytest-mock,
python-pytest-xdist, python2-pytest-xdist, python-scripttest,
python2-scripttest, python-testtools, python2-testtools, python-testscenarios,
python2-testscenarios, python-testresources, python2-testresources,
python-subunit, python2-subunit, python-fixtures, python2-fixtures,
python-testrepository, python2-testrepository, python-coverage,
python2-coverage, python-cov-core, python2-cov-core, python-testpath,
python2-testpath, python-testlib, python2-testlib, python-pytest-cache,
python2-pytest-cache, python-pytest-localserver, python-pytest-xprocess,
python-pytest-subtesthack, python2-pytest-subtesthack, python-hypothesis,
python2-hypothesis, python-lit, python2-lit, python-pytest-pep8,
python2-pytest-pep8, python-pytest-flakes, python2-pytest-flakes,
python2-coverage-test-runner, python-pylint, python2-pylint,
python-paramunittest, python2-python-paramunittest, python-pytest-warnings,
python2-pytest-warnings, python-pytest-capturelog, python2-pytest-capturelog,
python-pytest-catchlog, python2-pytest-catchlog, python-nosexcover,
python2-nosexcover, python-discover, python2-discover, behave, python-rednose,
python2-rednose, python-nose-randomly, python2-nose-randomly,
python-nose-timer, python2-nose-timer): Move from here...
* gnu/packages/check.scm: ...to here.
* gnu/packages/admin.scm,
gnu/packages/android.scm,
gnu/packages/backup.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/calendar.scm,
gnu/packages/dav.scm,
gnu/packages/django.scm,
gnu/packages/freedesktop.scm,
gnu/packages/haskell.scm,
gnu/packages/image.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/ldc.scm,
gnu/packages/libffi.scm,
gnu/packages/mail.scm,
gnu/packages/mpd.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/password-utils.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/rdf.scm,
gnu/packages/statistics.scm,
gnu/packages/storage.scm,
gnu/packages/time.scm,
gnu/packages/tls.scm,
gnu/packages/tor.scm,
gnu/packages/tryton.scm: Adjust accordingly.
 2017-11-17 22:36:26 +01:00
Kyle Meyer e99f045cc8
gnu: Add r-directlabels. 
* gnu/packages/statistics.scm (r-directlabels): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-09 23:54:48 +01:00
Ricardo Wurmus 2e648d2bc4
gnu: r-prabclus: Update description. 
* gnu/packages/statistics.scm (r-prabclus)[description]: Fix grammar errors.
 2017-11-07 23:32:46 +01:00
Ricardo Wurmus 14e5f6b20a
gnu: r-fdrtool: Update description. 
* gnu/packages/statistics.scm (r-fdrtool)[description]: Use "@dfn" syntax.
 2017-11-07 23:32:46 +01:00
Ricardo Wurmus 60ec9da3aa
gnu: r-tidyselect: Update to 0.2.3. 
* gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.3.
 2017-11-07 08:15:44 +01:00
Ricardo Wurmus 65a8cd6676
gnu: r-lubridate: Update to 1.7.1. 
* gnu/packages/statistics.scm (r-lubridate): Update to 1.7.1.
[propagated-inputs]: Add r-rcpp.
 2017-11-07 08:15:41 +01:00
Ricardo Wurmus 689edf1153
gnu: r-preprocesscore: Update to 1.40.0. 
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.40.0.
 2017-11-07 08:15:41 +01:00
Ricardo Wurmus e7f680f071
gnu: r-r-utils: Update to 2.6.0. 
* gnu/packages/statistics.scm (r-r-utils): Update to 2.6.0.
 2017-11-07 08:15:41 +01:00
Ricardo Wurmus ecfe98a17a
gnu: r-openssl: Update to 0.9.8. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.8.
 2017-11-07 08:15:40 +01:00
Ricardo Wurmus aced057fbc
gnu: r-rlang: Update to 0.1.4. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.1.4.
 2017-11-07 08:15:40 +01:00
Leo Famulari f9c3bd2e01
gnu: Generalize the variable name of the test-only tzdata package. 
* gnu/packages/base.scm (tzdata-2017a): Rename variable to tzdata-for-tests.
* gnu/packages/calcurse.scm (calcurse)[native-inputs, arguments]: Adjust
accordingly.
gnu/packages/glib.scm (glib): Likewise.
* gnu/packages/perl.scm (perl-libtime-parsedate): Adjust accordingly and
add tzdata-for-tests #:disallowed-references.
* gnu/packages/statistics.scm (r-minimal): Adjust accordingly.
 2017-11-04 10:32:30 -04:00
Ricardo Wurmus a6ec5b7043
gnu: r-withr: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-withr): Update to 2.1.0.
[propagated-inputs]: Add r-lattice.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus fd9afcf4ea
gnu: r-quantreg: Update to 5.34. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.34.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus 1fe75660c0
gnu: r-robustbase: Update to 0.92-8. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.92-8.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus 1fb415cb50
gnu: r-purrr: Update to 0.2.4. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.4.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus c8818f5577
gnu: r-irlba: Update to 2.3.1. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.1.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus 116e9837b5
gnu: r-checkmate: Update to 1.8.5. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.5.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus fde66e3018
gnu: r-multitaper: Update to 1.0-14. 
* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-14.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus 0a123e0609
gnu: r-data-table: Update to 1.10.4-3. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.10.4-3.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus b5a2f37157
gnu: r-pryr: Update to 0.1.3 
* gnu/packages/statistics.scm (r-pryr): Update to 0.1.3.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus bc409c8d3b
gnu: r-lazyeval: Update to 0.2.1. 
* gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.1.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus 1f6f4c40c1
gnu: Add r-tgconfig. 
* gnu/packages/statistics.scm (r-tgconfig): New variable.
 2017-10-30 12:07:53 +01:00
Ricardo Wurmus 7941d1ed5d
gnu: Add r-tgstat. 
* gnu/packages/statistics.scm (r-tgstat): New variable.
 2017-10-30 12:07:51 +01:00
Efraim Flashner 8ba3f751b6
gnu: r-nloptr: Update package hash. 
The source was repacked and reuploaded without incrementing the version
number. The difference was windows line endings on the windows files.

* gnu/packages/statistics.scm (r-nloptr)[source]: Update package hash.
 2017-10-26 10:46:02 +03:00
Kyle Meyer 4c77abc4da
gnu: Add r-forcats. 
* gnu/packages/statistics.scm (r-forcats): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 16:24:03 +02:00
Tobias Geerinckx-Rice 5713bbf157
Use HTTPS for bioconductor.org. 
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for
bioconductor.org URLs.
* gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter)
(r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category)
(r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews)
(r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata)
(r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi)
(r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray)
(r-summarizedexperiment, r-genomicalignments, r-rtracklayer)
(r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern)
(r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport)
(r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid)
(r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)
(r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db)
(r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db)
(r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9)
(r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene)
(r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10)
(r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]:
Likewise.
* gnu/packages/statistics.scm (r-rcurl)[source]: Likewise.
* guix/build-system/r.scm (bioconductor-uri): Likewise.
* guix/import/cran.scm (%cran-url, bioconductor-package?)
(bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
 2017-10-21 17:43:40 +02:00
Ricardo Wurmus e059bdc9a7
gnu: r-tidyr: Update to 0.7.2. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.7.2.
 2017-10-17 20:58:24 +02:00
Ricardo Wurmus d8455fe146
gnu: r-tidyselect: Update to 0.2.2. 
* gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.2.
 2017-10-17 20:58:24 +02:00
Ricardo Wurmus c43db8da3a
gnu: r-rcpparmadillo: Update to 0.8.100.1.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.8.100.1.0.
[native-inputs]: Add r-knitr.
 2017-10-17 20:58:24 +02:00
Ricardo Wurmus 711e6cc5f4
gnu: r-data-table: Update to 1.10.4-2. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.10.4-2.
 2017-10-17 20:58:23 +02:00
Ricardo Wurmus 767ad2f7ad
gnu: r-chron: Update to 2.3-51. 
* gnu/packages/statistics.scm (r-chron): Update to 2.3-51.
 2017-10-17 20:58:23 +02:00
Ricardo Wurmus dc6cb56dec
gnu: r-dplyr: Update to 0.7.4. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.4.
 2017-10-17 20:58:23 +02:00
Roel Janssen 6de897ac5a
gnu: Add r-ggdendro. 
* gnu/packages/statistics.scm (r-ggdendro): New variable.
 2017-10-11 10:02:08 +02:00
Ricardo Wurmus 6048986c89
gnu: r-lme4: Update to 1.1-14. 
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-14.
 2017-09-28 22:00:44 +02:00
Ricardo Wurmus 26cd4194ef
gnu: r-doparallel: Update to 1.0.11. 
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.11.
 2017-09-28 22:00:44 +02:00
Ricardo Wurmus 7147d8f7ad
gnu: r-checkmate: Update to 1.8.4. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.4.
 2017-09-28 22:00:44 +02:00
Ricardo Wurmus 2c49184e2c
gnu: r-backports: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-backports): Update to 1.1.1.
 2017-09-28 22:00:43 +02:00
Ricardo Wurmus 1344deb937
gnu: r-minimal: Update to 3.4.2. 
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.2.
 2017-09-28 20:21:18 +02:00
Ricardo Wurmus 91316f31d4
gnu: r-glmnet: Update to 2.0-13. 
* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-13.
 2017-09-24 11:36:17 +02:00
Ricardo Wurmus d9400ee46a
gnu: r-segmented: Update to 0.5-2.2. 
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-2.2.
 2017-09-24 11:36:17 +02:00
Ricardo Wurmus 29457c43bf
gnu: r-mgcv: Update to 1.8-22. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-22.
 2017-09-24 11:36:17 +02:00
Ricardo Wurmus 2c67f96b1b
gnu: r-glmnet: Update to 2.0-12. 
* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-12.
 2017-09-18 14:23:03 +02:00
Ricardo Wurmus 0b2fc9836b
gnu: r-lambda-r: Update to 1.2. 
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.
 2017-09-18 14:23:03 +02:00
Ricardo Wurmus 9f14fffea6
gnu: r-gridextra: Update to 2.3. 
* gnu/packages/statistics.scm (r-gridextra): Update to 2.3.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus 37c6a738f3
gnu: r-dplyr: Update to 0.7.3. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.3.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus b0c8cba485
gnu: r-crayon: Update to 1.3.4. 
* gnu/packages/statistics.scm (r-crayon): Update to 1.3.4.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus ea008095c3
gnu: r-svglite: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-svglite): Update to 1.2.1.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus 7904531e5b
gnu: r-mgcv: Update to 1.8-21. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-21.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus d9c65e5a9c
gnu: r-caret: Update to 6.0-77. 
* gnu/packages/statistics.scm (r-caret): Update to 6.0-77.
[propagated-inputs]: Remove r-car; add r-recipes and r-withr.
 2017-09-18 11:33:26 +02:00
Ricardo Wurmus 9272144a88
gnu: r-rstudioapi: Update to 0.7. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.7.
 2017-09-18 11:33:26 +02:00
Ricardo Wurmus 0dc3b4d41e
gnu: r-openssl: Update to 0.9.7. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.7.
[inputs]: Replace openssl with libressl.
 2017-09-18 11:33:25 +02:00
Ricardo Wurmus 8036caa75a
gnu: r-tidyr: Update to 0.7.1. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.7.1.
 2017-09-05 16:59:46 +02:00
Ricardo Wurmus 31b7f0c0fc
gnu: r-gdtools: Update to 0.1.6. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.6.
 2017-09-05 16:59:45 +02:00
Ricardo Wurmus ebbb6301a3
gnu: r-minimal: Update to 3.4.1. 
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.1.
 2017-09-01 22:05:39 +02:00
Ricardo Wurmus 89b620e7ee
gnu: r-tidyr: Update to 0.7.0. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.7.0.
[propagated-inputs]: Remove r-lazyeval; add r-glue, r-purrr, r-rlang, and
r-tidyselect.
 2017-09-01 15:11:58 +02:00
Ricardo Wurmus c4a4ef39ed
gnu: Add r-tidyselect. 
* gnu/packages/statistics.scm (r-tidyselect): New variable.
 2017-09-01 15:11:58 +02:00
Ricardo Wurmus 9077f6d9aa
gnu: r-tclust: Update to 1.3-1. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.3-1.
 2017-09-01 15:11:53 +02:00
Ricardo Wurmus 347cab66b6
gnu: r-fastcluster: Update to 1.1.24. 
* gnu/packages/statistics.scm (r-fastcluster): Update to 1.1.24.
 2017-09-01 15:11:52 +02:00
Ricardo Wurmus d574d6bcc2
gnu: r-rcpparmadillo: Update to 0.7.960.1.2. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.960.1.2.
 2017-09-01 15:11:52 +02:00
Ricardo Wurmus 2dda8fca6f
gnu: r-plotrix: Update to 3.6-6. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-6.
 2017-09-01 15:11:51 +02:00
Ricardo Wurmus 7d60652ebe
gnu: r-httr: Update to 1.3.1. 
* gnu/packages/statistics.scm (r-httr): Update to 1.3.1.
[propagated-inputs]: Remove r-digest and r-stringr.
 2017-09-01 15:11:51 +02:00
Ricardo Wurmus e3323e0707
gnu: r-commonmark: Update to 1.4. 
* gnu/packages/statistics.scm (r-commonmark): Update to 1.4.
 2017-09-01 15:11:51 +02:00
Ricardo Wurmus 5d84369bda
gnu: r-ade4: Update to 1.7-8. 
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-8.
 2017-09-01 15:11:50 +02:00
Ricardo Wurmus fb10c923b3
gnu: r-tibble: Update to 1.3.4. 
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.4.
 2017-09-01 15:11:50 +02:00
Ricardo Wurmus edd5fd7208
gnu: r-rlang: Update to 0.1.2. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.1.2.
 2017-09-01 15:11:49 +02:00
Ricardo Wurmus 5a00ef0950
gnu: r-knitr: Update to 1.17. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.17.
 2017-09-01 15:11:49 +02:00
Ricardo Wurmus 3949aef601
gnu: r-bh: Update to 1.65.0-1. 
* gnu/packages/statistics.scm (r-bh): Update to 1.65.0-1.
 2017-09-01 15:11:49 +02:00
Ricardo Wurmus b93881b9c5
gnu: r-scales: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-scales): Update to 0.5.0.
[propagated-inputs]: Add r-r6 and r-viridislite.
 2017-09-01 15:11:48 +02:00
Ricardo Wurmus 2d99a31607
gnu: r-mgcv: Update to 1.8-19. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-19.
 2017-09-01 15:11:48 +02:00
Ricardo Wurmus fefe9f4753
gnu: r-matrix: Update to 1.2-11. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-11.
 2017-09-01 15:11:48 +02:00
Ricardo Wurmus caa4e796e4
gnu: Add r-dbplyr. 
* gnu/packages/statistics.scm (r-dbplyr): New variable.
 2017-08-31 18:24:51 +02:00
Ricardo Wurmus 174fbd5f3b
gnu: r-minimal: Remove timestamp from man page. 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Adjust
"build-reproducibly" phase to prevent the bundled help2man script from
printing the current month and year.
 2017-08-28 15:51:05 +02:00
Efraim Flashner af9bb4cab8
gnu: pspp: Update to 1.0.1. 
* gnu/packages/statistics.scm (pspp): Update to 1.0.1.
 2017-08-28 14:44:41 +03:00
Ricardo Wurmus bd3a184613
gnu: r-minimal: Do not compress serialized files. 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Replace build phase
"patch-which" with "do-not-compress-serialized-files".
[propagated-inputs]: Move "which" from here...
[inputs]: ...to here.

Fixes <https://bugs.gnu.org/28157>.
 2017-08-22 16:24:24 +02:00
Ricardo Wurmus 6be54a8751
gnu: Add rmath-standalone. 
* gnu/packages/statistics.scm (rmath-standalone): New variable.
 2017-08-22 16:24:24 +02:00
Efraim Flashner bda6c35093
gnu: pspp: Update to 1.0.0. 
* gnu/packages/statistics.scm (pspp): Update to 1.0.0.
 2017-08-20 21:44:47 +03:00
Ricardo Wurmus a8cd352304
gnu: r-minimal: Work around failure to embed reference to "which". 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Add phase "patch-which".
[native-inputs]: Move "which" from here...
[propagated-inputs]: ...to here.
 2017-08-20 14:00:04 +02:00
Ricardo Wurmus 97cb349dc1
gnu: r-trimcluster: Update license. 
* gnu/packages/statistics.scm (r-trimcluster)[license]: Also specify GPLv3+.
 2017-08-17 17:26:11 +02:00
Efraim Flashner adcb30642c
gnu: pspp: Update to 0.11.0. 
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
 2017-08-16 17:57:40 +03:00
Efraim Flashner 2d430f2923
Revert "gnu: pspp: Update to 0.11.0." 
This FTBFS on x86_64 and i686.

This reverts commit f4c808df5b.
 2017-08-15 10:03:40 +03:00
Efraim Flashner f4c808df5b
gnu: pspp: Update to 0.11.0. 
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
 2017-08-13 10:16:17 +03:00
Ricardo Wurmus c5f744a68d
gnu: Add r-robust. 
* gnu/packages/statistics.scm (r-robust): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 5d0afe8849
gnu: Add r-fit-models. 
* gnu/packages/statistics.scm (r-fit-models): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 0bae5fd6a7
gnu: Add r-rrcov. 
* gnu/packages/statistics.scm (r-rrcov): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 23841b2573
gnu: Add r-pcapp. 
* gnu/packages/statistics.scm (r-pcapp): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 0ecd065839
gnu: r-gdtools: Update to 0.1.5. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.5.
 2017-08-09 20:08:12 +02:00
Ricardo Wurmus c3317cd9fb
gnu: r-ggbeeswarm: Update to 0.6.0. 
* gnu/packages/statistics.scm (r-ggbeeswarm): Update to 0.6.0.
 2017-08-09 20:08:12 +02:00
Ricardo Wurmus 1738138cb3
gnu: r-igraph: Move to (gnu packages graph). 
* gnu/packages/statistics.scm (r-igraph): Move from here...
* gnu/packages/graph.scm (r-igraph): ...to here.
 2017-08-09 14:47:47 +02:00
Ricardo Wurmus 2267e4d3f6
gnu: r-purrr: Update to 0.2.3. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.3.
[propagated-inputs]: Remove r-rcpp and r-lazyeval; add r-rlang.
 2017-08-03 17:53:55 +02:00
Ricardo Wurmus ceb802a31c
gnu: r-desc: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-desc): Update to 1.1.1.
 2017-08-03 17:53:55 +02:00
Ricardo Wurmus 85cd755417
gnu: r-tclust: Update to 1.2-7. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.2-7.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 6bb4bfa4bc
gnu: r-car: Update to 2.1-5. 
* gnu/packages/statistics.scm (r-car): Update to 2.1-5.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 0f008abe7a
gnu: r-rcppeigen: Update to 0.3.3.3.0. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.3.0.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 12c3bbb662
gnu: r-pbapply: Update to 1.3-3. 
* gnu/packages/statistics.scm (r-pbapply): Update to 1.3-3.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 4431dd3a4e
gnu: r-vgam: Update to 1.0-4. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.0-4.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 41692b2963
gnu: r-mclust: Update to 5.3. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.3.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 60869fb2f8
gnu: r-flexmix: Update to 2.3-14. 
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-14.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 62d3afc3d6
gnu: r-fastica: Update to 1.2-1. 
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-1.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus df03b6f90c
gnu: r-cowplot: Update to 0.8.0. 
* gnu/packages/statistics.scm (r-cowplot): Update to 0.8.0.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus d58faa7f44
gnu: r-rann: Update to 2.5.1. 
* gnu/packages/statistics.scm (r-rann): Update to 2.5.1.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus a8c2706de2
gnu: r-statmod: Update to 1.4.30. 
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.30.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus 80d1185076
gnu: r-gdata: Update to 2.18.0. 
* gnu/packages/statistics.scm (r-gdata): Update to 2.18.0.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus 2c75199c56
gnu: r-sfsmisc: Update to 1.1-1. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-1.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus 1d256438c8
gnu: r-googlesheets: Update to 0.2.2. 
* gnu/packages/statistics.scm (r-googlesheets): Update to 0.2.2.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 9b9fef0eaf
gnu: r-tidyr: Update to 0.6.3. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.6.3.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus e1cd25bc78
gnu: r-glmnet: Update to 2.0-10. 
* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-10.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 1c576cbadb
gnu: r-irlba: Update to 2.2.1. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.2.1.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 81c057ced9
gnu: r-sparsem: Update to 1.77. 
* gnu/packages/statistics.scm (r-sparsem): Update to 1.77.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 127b926bc1
gnu: r-segmented: Update to 0.5-2.1. 
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-2.1.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus fe9917284f
gnu: r-xml: Update to 3.98-1.9. 
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.9.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus cc8ba9b69c
gnu: r-rmarkdown: Update to 1.6. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.6.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus 7c172eacfa
gnu: r-rcpparmadillo: Update to 0.7.900.2.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.900.2.0.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus 1c41d51743
gnu: r-plotrix: Update to 3.6-5. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-5.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus 76040b8561
gnu: r-readr: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-readr): Update to 1.1.1.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus d8048a1212
gnu: r-withr: Update to 2.0.0. 
* gnu/packages/statistics.scm (r-withr): Update to 2.0.0.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus f212bf84ab
gnu: r-git2r: Update to 0.19.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.19.0.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus 58e1ce86ab
gnu: r-checkmate: Update to 1.8.3. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.3.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus 63f934e672
gnu: r-backports: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-backports): Update to 1.1.0.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus c832d326a1
gnu: r-formula: Update to 1.2-2. 
* gnu/packages/statistics.scm (r-formula): Update to 1.2-2.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus f05c6275b7
gnu: r-r6: Update to 2.2.2. 
* gnu/packages/statistics.scm (r-r6): Update to 2.2.2.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus b07c8c0156
gnu: r-knitr: Update to 1.16. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.16.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus 6dc86e8dfc
gnu: r-formatr: Update to 1.5. 
* gnu/packages/statistics.scm (r-formatr): Update to 1.5.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus 12cd797541
gnu: r-evaluate: Update to 0.10.1. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.10.1.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus d5ce380711
gnu: r-dbi: Update to 0.7. 
* gnu/packages/statistics.scm (r-dbi): Update to 0.7.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus 831858a7d3
gnu: r-bit64: Update to 0.9-7. 
* gnu/packages/statistics.scm (r-bit64): Update to 0.9-7.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus 6fb21ed2a3
gnu: r-mgcv: Update to 1.8-18. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-18.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus dbeda1b4a0
gnu: r-matrix: Update to 1.2-10. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-10.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus 74b037df64
gnu: r-foreign: Update to 0.8-69. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-69.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus af1eeabe89
gnu: r-boot: Update to 1.3-20. 
* gnu/packages/statistics.scm (r-boot): Update to 1.3-20.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus 64c6712d03
gnu: r-knitrbootstrap: Update to 1.0.1. 
* gnu/packages/statistics.scm (r-knitrbootstrap): Update to 1.0.1.
 2017-08-03 17:53:44 +02:00
Ricardo Wurmus c628b8418a
gnu: r-ranger: Update to 0.8.0. 
* gnu/packages/statistics.scm (r-ranger): Update to 0.8.0.
[propagated-inputs]: Add r-matrix and r-rcppeigen.
 2017-08-03 17:53:44 +02:00
Ricardo Wurmus cc9a778ecc
gnu: r-hmisc: Update to 4.0-3. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0-3.
[propagated-inputs]: Remove r-base64.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus f9b3760636
gnu: r-plotly: Update to 4.7.1. 
* gnu/packages/statistics.scm (r-plotly): Update to 4.7.1.
[propagated-inputs]: Add r-crosstalk, r-data-table, r-htmltools, and
r-rcolorbrewer.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus d59050823e
gnu: r-igraph: Update to 1.1.2. 
* gnu/packages/statistics.scm (r-igraph): Update to 1.1.2.
[propagated-inputs]: Remove r-nmf; add r-matrix and r-pkgconfig.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus 7b3688150b
gnu: r-purrr: Update to 0.2.2.2. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.2.2.
[propagated-inputs]: Remove r-bh and r-dplyr; add r-tibble.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus 5fc74f24bf
gnu: r-devtools: Update to 1.13.3. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.13.3.
[propagated-inputs]: Remove r-curl, r-digest, r-evaluate, r-roxygen2, and
r-rversions.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus aad948a0ea
gnu: r-tibble: Update to 1.3.3. 
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.3.
[propagated-inputs]: Remove r-lazyeval, add r-rlang.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus a40b2c2129
gnu: r-dplyr: Update to 0.7.2. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.2.
[propagated-inputs]: Remove r-lazyeval, r-dbi; add r-rlang, r-plogr, r-glue,
r-pkgconfig, r-bindrcpp.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus a8cba9dd11
gnu: r-rcpp: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rcpp): Move from here...
* gnu/packages/cran.scm (r-rcpp): ...to here.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus 736332c79c
gnu: r-rcpp: Update to 0.12.12. 
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.12.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus 847b457253
gnu: r-plogr: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-plogr): Move from here...
* gnu/packages/cran.scm (r-plogr): ...to here.
 2017-08-03 17:53:41 +02:00
Roel Janssen 2f06dc0435
gnu: Add r-rlang. 
* gnu/packages/statistics.scm (r-rlang): New variable.
 2017-08-02 00:57:39 +02:00
Roel Janssen 8060a61798
gnu: r-rsqlite: Update to 2.0. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.0.
 2017-08-02 00:23:16 +02:00
Roel Janssen 796237a9a4
gnu: Add r-blob. 
* gnu/packages/statistics.scm (r-blob): New variable.
 2017-08-02 00:22:33 +02:00
Roel Janssen aa184803f8
gnu: Add r-pkgconfig. 
* gnu/packages/statistics.scm (r-pkgconfig): New variable.
 2017-08-02 00:21:40 +02:00
Roel Janssen 14fce399cc
gnu: r-foreign: Update hash after upstream tarball change. 
* gnu/packages/statistics.scm (r-foreign):  Update hash.  The only difference
  in the tarball is the metadata.  The contents are identical.
 2017-08-01 23:07:58 +02:00