Commit Graph

32424 Commits

Author SHA1 Message Date
Ricardo Wurmus a4ab65ee79
gnu: pigx-scrnaseq: Update to 0.0.4.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 0.0.4.
2018-05-23 15:27:32 +02:00
Ricardo Wurmus 6623bd826b
gnu: libusb-for-axoloti: Adjust patch.
* gnu/packages/patches/libusb-for-axoloti.patch: Adjust patch for use with
current version of libusb.
2018-05-23 15:23:01 +02:00
Ricardo Wurmus 8efe2a22ea
gnu: Use "code" instead of "indent".
This is a follow-up to commit e470abf8b7.

* gnu/packages/commencement.scm,
gnu/packages/flex.scm: Use module "code" instead of "indent".
2018-05-23 13:59:46 +02:00
Ricardo Wurmus 6c7d0620cf
gnu: Use "code" instead of "indent".
This is a follow-up to commit e470abf8b7.

* gnu/packages/debug.scm: Use module "code" instead of "indent".
2018-05-23 13:58:40 +02:00
Rouby Pierre-Antoine 21290c35b1
gnu: Add go-github-com-tevino-abool.
* gnu/packages/golang.scm (go-github-com-tevino-abool): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-23 13:53:14 +02:00
Rouby Pierre-Antoine 28380e0e28
gnu: Add go-github-com-stretchr-testify.
* gnu/packages/golang.scm (go-github-com-stretchr-testify): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-23 13:53:14 +02:00
Rouby Pierre-Antoine c4230cda09
gnu: Add go-github-com-jpillora-backoff.
* gnu/packages/golang.scm (go-github-com-jpillora-backoff): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-23 13:53:14 +02:00
Rouby Pierre-Antoine 0972411a57
gnu: Add go-github-com-hashicorp-go-version.
* gnu/packages/golang.scm (go-github-com-hashicorp-go-version): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-23 13:53:14 +02:00
Rouby Pierre-Antoine 8c5a69aa00
gnu: Add go-github-com-getsentry-raven-go.
* gnu/packages/golang.scm (go-github-com-getsentry-raven-go): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-23 13:53:14 +02:00
Rouby Pierre-Antoine fb50664f6b
gnu: Add go-github-com-burntsushi-toml.
* gnu/packages/golang.scm (go-github-com-burntsushi-toml): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-23 13:53:13 +02:00
Ricardo Wurmus 2b47ebe1a6
gnu: Add r-learnr.
* gnu/packages/cran.scm (r-learnr): New variable.
2018-05-23 13:48:57 +02:00
Ricardo Wurmus 94a8990f78
gnu: Add r-rappdirs.
* gnu/packages/cran.scm (r-rappdirs): New variable.
2018-05-23 13:48:57 +02:00
Ludovic Courtès e470abf8b7
gnu: Move 'indent' to code.scm.
Suggested by Pierre Neidhardt <ambrevar@gmail.com>.

* gnu/packages/indent.scm: Remove.  Move 'indent' to...
* gnu/packages/code.scm (indent):  ... here.  New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove indent.scm.
2018-05-23 12:14:27 +02:00
Ludovic Courtès c1e5109b68
gnu: Move 'astyle' to code.scm.
Suggested by Pierre Neidhardt <ambrevar@gmail.com>.

* gnu/packages/pretty-print.scm (astyle): Move to...
* gnu/packages/code.scm (astyle): ... here.  New variable.
2018-05-23 12:14:12 +02:00
Pierre Neidhardt 9c4dcfaf66
gnu: Add uncrustify.
* gnu/packages/code.scm (uncrustify): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-23 12:09:37 +02:00
Ludovic Courtès 7874bbbb9f
records: Insert record type ABI checks in constructors.
* guix/records.scm (print-record-abi-mismatch-error): New procedure.
<top level>: Add 'set-exception-printer!' call.
(current-abi-identifier, abi-check): New procedures.
(make-syntactic-constructor): Add #:abi-cookie parameter.  Insert calls
to 'abi-check'.
(define-record-type*)[compute-abi-cookie]: New procedure.
Use it and emit a definition of the 'current-abi-identifier' for TYPE.
* tests/records.scm ("ABI checks"): New test.
2018-05-23 10:21:02 +02:00
Ludovic Courtès 56f9d442e0
vm: Use a deterministic file system UUID in shared-store VMs.
* gnu/system/vm.scm (system-qemu-image/shared-store): Pass
 #:file-system-uuid to 'qemu-image'.
2018-05-23 10:21:02 +02:00
Ludovic Courtès 353df40102
vm: Print the label and UUID of partitions.
* gnu/build/vm.scm (create-ext-file-system): Print the label and UUID.
2018-05-23 10:21:02 +02:00
Ludovic Courtès d282388789
linux-initrd: Enable "virtio-rng".
Fixes <https://bugs.gnu.org/31268>.

* gnu/system/linux-initrd.scm (default-initrd-modules)[virtio-modules]:
Add "virtio-rng".
2018-05-23 10:21:02 +02:00
Ricardo Wurmus b2086776f1
gnu: gimp-fourier: Fix build.
* gnu/packages/gimp.scm (gimp-fourier)[arguments]: Copy gegl-0.4.pc to
gegl-0.3.pc in the configure phase.
[inputs]: Add gegl.
2018-05-23 10:08:20 +02:00
Mark H Weaver 4935701a4a
Revert "gnu: cmake: Delete Emacs library."
This reverts commit f037673c31.
2018-05-22 14:39:53 -04:00
Oleg Pykhalov aa4818c33b
gnu: cmake.scm: Add missing module.
* gnu/packages/cmake.scm: Import emacs-build-system.
2018-05-22 17:37:14 +03:00
Oleg Pykhalov bbdf36666b
gnu: Add emacs-cmake-mode.
* gnu/packages/cmake.scm (emacs-cmake-mode): New public variable.
2018-05-22 17:20:46 +03:00
Oleg Pykhalov f037673c31
gnu: cmake: Delete Emacs library.
* gnu/packages/finance.scm (cmake)[arguments]: Delete Emacs library.
2018-05-22 17:16:40 +03:00
Ricardo Wurmus 0f5ad3a1bc
gnu: bismark: Patch bismark2report before installing.
* gnu/packages/bioinformatics.scm (bismark)[arguments]: Patch file before
installing it.
2018-05-22 16:05:41 +02:00
Pierre Neidhardt 71d3521541
gnu: Add emacs-esh-autosuggest.
* gnu/packages/emacs.scm (emacs-esh-autosuggest): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-05-22 12:26:01 +02:00
Ricardo Wurmus 35d438439c
gnu: emacs-daemons: Fix typo in description.
* gnu/packages/emacs.scm (emacs-daemons)[description]: Fix typo.
2018-05-22 12:16:49 +02:00
Pierre Neidhardt bdadf8557e
gnu: Add emacs-daemons.
* gnu/packages/emacs.scm (emacs-daemons): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-05-22 12:15:33 +02:00
Mark H Weaver 6b84d396e0
gnu: gstreamer: Update to 4.14.1.
* gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base, gst-plugins-good)
(gst-plugins-bad, gst-plugins-ugly, gst-libav, python-gst): Update to 4.14.1.
2018-05-22 04:35:40 -04:00
Mark H Weaver 4e2432d1b2
gnu: isc-dhcp: Update to 4.4.1.
* gnu/packages/admin.scm (isc-dhcp): Update to 4.4.1.  Update bundled copy of
bind to 9.11.3.
[license]: Change license to MPL-2.0.
2018-05-22 04:35:32 -04:00
Leo Famulari 096c10cb47
gnu: mutt: Update to 1.10.0.
* gnu/packages/mail.scm (mutt): Update to 1.10.0.
2018-05-21 15:35:20 -04:00
Mark H Weaver ab9da9ec66
Merge branch 'master' into core-updates 2018-05-21 13:41:18 -04:00
Leo Famulari 4699ffa383
gnu: procps: Update to 3.3.14.
* gnu/packages/linux.scm (procps): Update to 3.3.14.
[arguments]: Remove obsolete phase 'disable-strtod-test' because the change has
been upstreamed.
2018-05-21 13:34:18 -04:00
Leo Famulari 7d798b3bb3
gnu: curl: Update replacement to 7.60.0 [Fixes CVE-2018-{1000300,1000301}].
* gnu/packages/curl.scm (curl)[replacement]: Update to 7.60.0.
(curl-7.59.0): Replace with ...
(curl-7.60.0): ... new variable.
2018-05-21 13:34:18 -04:00
Leo Famulari 27135cf447
gnu: BIND: Update to 9.12.1-P2 [fixes CVE-2018-{5736,5737}].
* gnu/packages/dns.scm (isc-bind): Update to 9.12.1-P2.
2018-05-21 13:34:18 -04:00
Andreas Enge 6bc85e79c2
gnu: pius: Really add the patch file.
* gnu/packages/patches/pius.patch: New file.

This is a follow-up to commit a92d97266d.
2018-05-21 19:24:51 +02:00
Mark H Weaver 0661758e13
Merge branch 'master' into core-updates 2018-05-21 13:22:32 -04:00
Mark H Weaver c036959b1a
gnu: linux-libre: Update to 4.16.10.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.16.10.
(%linux-libre-hash): Update hash.
2018-05-21 13:20:18 -04:00
Mark H Weaver b1bb1e8429
gnu: linux-libre@4.14: Update to 4.14.42.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.42.
(%linux-libre-4.14-hash): Update hash.
2018-05-21 13:19:33 -04:00
Mark H Weaver e205afbd1c
gnu: linux-libre@4.9: Update to 4.9.101.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.101.
2018-05-21 13:18:41 -04:00
Andreas Enge a92d97266d
gnu: pius: Fix incompatibility with newer GnuPG versions.
* gnu/packages/gnupg.scm (pius)[source]: Add patch.
* gnu/packages/patches/pius.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-05-21 17:05:56 +02:00
Andreas Enge fcb1dd9994
gnu: pius: Add input python2-sip.
* gnu/packages/gnupg.scm (pius)[inputs]: Add python2-six, imported from
the pius Python script.
2018-05-21 16:55:11 +02:00
Efraim Flashner c9dbcd208d
gnu: aria2: Update to 1.34.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.34.0.
2018-05-21 13:25:34 +03:00
Danny Milosavljevic de136f3ee7
profiles: Add hook to generate "gschemas.compiled".
* guix/profiles.scm (glib-schemas): New procedure.
(%default-profile-hooks): Add it.
2018-05-21 09:56:37 +02:00
Danny Milosavljevic f1656a59f4
gnu: Add can-utils.
* gnu/packages/networking.scm (can-utils): New variable.
2018-05-21 02:33:28 +02:00
Vagrant Cascadian 5a9dc4a807
gnu: linux-libre: Enable build for aarch64-linux.
* gnu/packages/linux.scm (%linux-compatible-systems): Add aarch64-linux.
  (linux-libre-4.14): Limit to x86_64-linux, i686-linux and armhf-linux.
* gnu/packages/aux-files/linux-libre/4.16-arm64.conf: New file.
* Makefile.am (AUX_FILES): Add 4.16-arm64.conf.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-21 00:12:02 +02:00
Vagrant Cascadian a8e3fd5f9d
gnu: linux-libre: Use "make dtbs_install" to install device tree files.
* gnu/packages/linux.scm (make-linux-libre):
  Use "make dtbs_install" to install device tree files.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-20 23:36:59 +02:00
Fis Trivial 62813c10a9
gnu: Add vigra-c.
* gnu/packages/image.scm (vigra-c): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-20 23:34:27 +02:00
Fis Trivial 1900fa792f
gnu: Add python-glob2.
* gnu/packages/python.scm (python-glob2, python2-glob2): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-20 23:20:37 +02:00
Tonton dea5c0b8d0
gnu: Add ghc-bytes.
* gnu/packages/haskell.scm (ghc-bytes): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-20 22:58:50 +02:00