Commit Graph

1894 Commits

Author SHA1 Message Date
Ben Woodcroft e88d5fa9eb import: gem: Beautify only the description, not the synopsis.
* guix/import/gem.scm (make-gem-sexp): Add synopsis argument.
(gem->guix-package): Pass unbeautified synopsis to make-gem-sexp.
* tests/gem.scm: Adapt it.
2016-01-20 21:52:52 +10:00
Ricardo Wurmus d0bd632f89 import: Add Bioconductor importer and updater.
* guix/import/cran.scm (%bioconductor-updater,
latest-bioconductor-release, bioconductor-package?): New procedures.
(cran->guix-package): Support repositories other than CRAN.
(%bioconductor-url, %bioconductor-svn-url): New variables.
(description->package): Update signature to distinguish between packages
from different repositories.
(latest-release): Rename procedure ...
(latest-cran-release): ... to this.
(cran-package?): Do not assume all R packages are available on CRAN.
* tests/cran.scm: Update tests.
* guix/scripts/import/cran.scm: Add "--archive" option and default to
CRAN.
* guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater".
* doc/guix.texi: Document Bioconductor importer and updater.
2016-01-20 12:41:28 +01:00
Ludovic Courtès f495301902 guix build: Add '--keep-going'.
* guix/scripts/build.scm (show-build-options-help)
(%standard-build-options): Add --keep-going.
* guix/scripts/build.scm (set-build-options-from-command-line): Honor
it.
* doc/guix.texi (Invoking guix build): Document it.
2016-01-19 21:59:58 +01:00
Alex Kost b8300494c0 Move <boot-parameters> to (gnu system).
* guix/scripts/system.scm (previous-grub-entries)
  (display-system-generation): Use accessors instead of matching
  <boot-parameters>.
  (boot-parameters, boot-parameters?, boot-parameters-label)
  (boot-parameters-root-device, boot-parameters-kernel)
  (boot-parameters-kernel-arguments, read-boot-parameters): Move to...
* gnu/system.scm: ... here. Export them.
2016-01-16 13:02:21 +03:00
Ben Woodcroft 869cda545d import: gem: Beautify description field.
* guix/import/gem.scm (gem->guix-package): Use 'beautify-description'.
2016-01-14 19:44:40 +10:00
Ben Woodcroft 2028a2c960 import: cran: Move beautify-description to utils module.
* guix/import/cran.scm (beautify-description): Move from here...
* guix/import/utils.scm: ... to here.
2016-01-14 19:44:36 +10:00
Ludovic Courtès b8a35309f8 build-system/gnu: 'dist-package' can be passed the phases.
* guix/build-system/gnu.scm (dist-package): Add #:phases parameter and
honor it.
2016-01-13 17:43:21 +01:00
Ludovic Courtès 8c9ef2c3a2 monad-repl: Close connection when leaving the monad REPL.
* guix/monad-repl.scm (store-monad-language): Add 'store' parameter and
use it.  Remove call to 'open-connection'.
(enter-store-monad): Use 'with-store' and pass the store to
'store-monad-language.
2016-01-13 17:43:21 +01:00
Ludovic Courtès 17ad0a2714 build-system/python: 'pypi-uri' takes an optional file name extension.
Suggested by swedebugia <swedebugia@riseup.net>.

* guix/build-system/python.scm (pypi-uri): Add 'extension' parameter and
use it.
2016-01-08 19:06:26 +01:00
Ricardo Wurmus 34a75d35bb import: Rename "cran-fetch" to "fetch-description".
* guix/import/cran.scm (cran-fetch): Rename procedure ...
(fetch-description): ... to this.
2016-01-07 17:18:04 +01:00
Ricardo Wurmus d1c116089b import: Add package->upstream-name procedure.
* guix/import/cran.scm (package->upstream-name): New procedure.
2016-01-07 17:18:02 +01:00
Ludovic Courtès d4aaf95401 build-system/gnu: Make 'package-with-explicit-inputs' idempotent.
* guix/build-system/gnu.scm (package-with-explicit-inputs): Use
  'ensure-keyword-arguments' instead of appending to ARGS.
* gnu/packages/commencement.scm (static-bash-for-glibc): Add missing
  #:guile argument.
2016-01-06 23:08:22 +01:00
Ludovic Courtès 6071122b71 utils: Add 'ensure-keyword-arguments'.
* guix/utils.scm (delkw, ensure-keyword-arguments): New procedures.
* tests/utils.scm ("ensure-keyword-arguments"): New test.
2016-01-06 23:08:22 +01:00
Ludovic Courtès 793a43f409 http-client: Work around <http://bugs.gnu.org/22273>.
* guix/http-client.scm (read-header-line): New procedure.  Use it.
2016-01-06 23:08:22 +01:00
Ludovic Courtès 1c63dafce6 http-client: Fix erroneous comment.
* guix/http-client.scm: Fix Guile version number in comment for Guile
commit 5a10e41.
2016-01-06 23:08:22 +01:00
Ludovic Courtès f888c0b120 lint: cve: Catch host name lookup errors.
* guix/scripts/lint.scm (package-vulnerabilities): Catch
'getaddrinfo-error'.
2016-01-06 15:54:12 +01:00
Ben Woodcroft 7266848ace build: ruby: Remove cached gem after install.
The .gem file stored in GEM_HOME after install is both redundant and an
archive that stores timestamped files which makes builds
non-deterministic, so delete it after 'gem install'.

* guix/build/ruby-build-system.scm (install): Remove cached gem after
  install.
2016-01-06 12:42:41 +01:00
Taylan Ulrich Bayırlı/Kammer f07041f7d2 build: pull: Compile .scm files in one process.
* guix/build/pull.scm (call-with-process, report-build-progress)
(p-for-each): Remove.
(build-guix): Load and compile files in one process.
2016-01-05 23:30:30 +01:00
Ludovic Courtès db5a94445f guix package: Allow multiple '--search' flags.
* guix/scripts/package.scm (find-packages-by-description): Change 'rx'
parameter to 'regexps'.
[matches-all?, matches-one?]: New procedures.
Use them.
(process-query): Collect regexps from all 'search' queries, and pass
them to 'find-packages-by-description'.
* tests/guix-package.sh: Add tests.
* doc/guix.texi (Invoking guix package): Document it.
2016-01-05 00:28:42 +01:00
Ludovic Courtès d28ef43937 ui: Update copyright year in '--version' output.
* guix/ui.scm (show-version-and-exit): Increment copyright year.
2016-01-05 00:28:42 +01:00
Ludovic Courtès 35a6dabcf1 git-download: Correctly implement recursive checkouts.
Previously, the 'git checkout' invocation would remove sub-modules that
had been initialized by 'git clone --recursive'.

* guix/build/git.scm (git-fetch): Never use "git clone --recursive".
Invoke "git submodule update --init --recursive" after "git checkout".
Remove '.git' directories as the last step.
2016-01-05 00:28:42 +01:00
Ludovic Courtès 51385362f7 graph: %BAG-WITH-ORIGINS-NODE-TYPE includes the origin's guile.
Before that it would include #f for most origins since that the default
value of 'origin-patch-guile'.

* guix/scripts/graph.scm (bag-node-edges): When 'origin-patch-guile'
returns #f, use (default-guile).
* tests/graph.scm ("bag DAG, including origins"): Check for an edge from
O to (default-guile).
2016-01-02 22:25:41 +01:00
Ludovic Courtès f88282af38 graph: %BAG-EMERGED-NODE-TYPE filters out origins.
Fixes <http://bugs.gnu.org/22280>.
Reported by Leo Famulari <leo@famulari.name>.

* guix/scripts/graph.scm (%bag-emerged-node-type)[edges]: Mimic
%BAG-NODE-TYPE.  This is a followup to 38b92da.
2016-01-02 22:25:41 +01:00
Ricardo Wurmus b7fa2f9321 licenses: Add CC BY SA 3.0.
* guix/licenses.scm (cc-by-sa3.0): New variable.
2015-12-30 20:41:33 +01:00
Ludovic Courtès 223d793903 guix build: Augment %PATCH-PATH when -L is passed.
Fixes <http://bugs.gnu.org/22259>.
Reported by Nikolay Merinov <nikolay.merinov@member.fsf.org>.

* guix/scripts/build.scm (%standard-build-options) <-L>: Augment
%PATCH-PATH.
* tests/guix-package.sh: Add test.
2015-12-30 18:15:54 +01:00
Leo Famulari 38fa30eb95 guix package: Fix typo in comment.
* guix/scripts/package.scm: Fix typo.
2015-12-25 23:36:42 -05:00
Ricardo Wurmus 12d38e8d43 build: Add bioconductor-uri procedure.
* guix/build-system/r.scm (bioconductor-uri): New procedure.
2015-12-21 22:32:01 +01:00
Ricardo Wurmus be036757bd import: Drop empty list items.
* guix/import/cran.scm (listify): Remove empty strings from result list.
2015-12-21 15:24:54 +01:00
Ricardo Wurmus 0cb5bc2cff http-client: Support basic authentication.
* guix/http-client.scm (http-fetch): Add Authorization header to request
  when the URI contains userinfo.
2015-12-21 15:24:44 +01:00
Ludovic Courtès c5b303c57f lint: The CPE name of GRUB is "grub2".
Reported by Leo Famulari.

* guix/scripts/lint.scm (package-name->cpe-name): Add "grub".
2015-12-20 22:34:22 +01:00
Ludovic Courtès ccda8f7d7f profiles: Honor search paths of propagated inputs.
Fixes <http://bugs.gnu.org/22073>.
Reported by Federico Beffa <beffa@ieee.org>.

* guix/profiles.scm (package->manifest-entry): Use
'package-transitive-native-search-paths' when computing
'search-paths' field.
* tests/profiles.scm ("package->manifest-entry, search paths"): New test.
2015-12-20 22:34:22 +01:00
Ludovic Courtès aa8e051532 packages: Add 'package-transitive-native-search-paths'.
* guix/packages.scm (package-transitive-native-search-paths): New
procedure.
* tests/packages.scm ("package-transitive-native-search-paths"): New
test.
2015-12-20 22:34:22 +01:00
Ludovic Courtès 9d3994f700 gexp: 'local-file' resolves relative file names.
* guix/gexp.scm (<local-file>): Rename constructor to '%%local-file'.
Add 'absolute' field.
(%local-file, extract-directory, absolute-file-name): New procedures.
(current-source-directory): New macro.
(local-file): Adjust call to '%local-file'.
(local-file-absolute-file-name): New procedure.
(local-file-compiler): Force the 'absolute' field.
* tests/guix-system.sh: Test whether 'local-file' canonicalization
works.
* doc/guix.texi (G-Expressions): Adjust.
2015-12-14 19:57:42 +01:00
Ludovic Courtès 4fef1e850e profiles: Silence Info installation.
* guix/profiles.scm (info-dir-file)[build]: Pass --silent to
'install-info'.
2015-12-14 19:57:42 +01:00
Ludovic Courtès 20464dde13 guix build: Gracefully handle type errors in -e and -f.
* guix/scripts/build.scm (options->things-to-build)[validate-type]: New
procedure.
[ensure-list]: Use it.
2015-12-13 21:13:16 +01:00
Ludovic Courtès ee2a7e3fd2 guix build: Remove dead code.
* guix/scripts/build.scm (options->things-to-build): Remove unused
'match' clause.
2015-12-13 21:04:56 +01:00
Ricardo Wurmus 0f6b9e9828 import: cran: Parse DESCRIPTION instead of HTML.
* guix/import/cran.scm (description->alist, listify,
  beautify-description, description->package): New procedures.
(table-datum, downloads->url, nodes->text, cran-sxml->sexp): Remove
proceduces.
(latest-release): Use parsed DESCRIPTION instead of SXML.
* tests/cran.scm: Rewrite to match importer.
2015-12-11 15:35:07 +01:00
Ricardo Wurmus b6a222757b import: cran: Match more license strings.
* guix/import/cran.scm (string->license): Match more license strings to
  license symbols.
2015-12-11 15:35:07 +01:00
Ludovic Courtès 873d0ff2cd gnu-maintenance: Really find the latest GNOME releases.
Reported by Efraim Flashner <efraim@flashner.co.il>
at <https://lists.gnu.org/archive/html/guix-devel/2015-12/msg00202.html>.

* guix/gnu-maintenance.scm (latest-ftp-release): Call KEEP-FILE? on
directories too.
(latest-gnome-release)[even-minor-version?]: Protect again MINOR being
false; change pattern to match VERSION with two or more numbers.  Remove
use of 'version-major+minor'.
[even-numbered-tarball?]: Rename to...
[even-numbered?]: ... this.  Use 'package-name->name+version'.  When
VERSION is #f, check NAME.
2015-12-09 22:18:47 +01:00
Ludovic Courtès a8d65643fb guix build: Add '--check'.
* guix/derivations.scm (build-derivations): Add optional 'mode'
parameter.
* guix/scripts/build.scm (%default-options): Add 'build-mode'.
(show-help, %options): Add '--check'.
(guix-build): Honor 'build-mode' key of OPTS.  Pass it to
'show-what-to-build' and 'build-derivations'.
* doc/guix.texi (Invoking guix build): Document it.
(Substitutes): Mention it.
2015-12-09 14:29:41 +01:00
Ludovic Courtès 58c08df054 derivations: Determine what's built in 'check' mode.
* guix/derivations.scm (substitution-oracle): Add #:mode parameter and
honor it.
(derivation-prerequisites-to-build): Likewise.
[derivation-built?]: Take it into account.
* guix/ui.scm (show-what-to-build): Add #:mode parameter.  Pass it to
'substitute-oracle' and 'derivations-prerequisites-to-build'.
* tests/derivations.scm ("derivation-prerequisites-to-build in 'check'
mode"): New test.
2015-12-09 14:29:41 +01:00
Ludovic Courtès 5b74fe065b guix build: Add '--rounds'.
* guix/scripts/build.scm (show-build-options-help)
(%standard-build-options): Add --rounds.
(set-build-options-from-command-line): Honor it.
* doc/guix.texi (Invoking guix build): Document it.
* doc/contributing.texi (Submitting Patches): Mention it.
2015-12-08 23:58:12 +01:00
Ludovic Courtès 2fba87ac7c store: Allow clients to request multiple builds.
* guix/store.scm (set-build-options): Add #:rounds parameter and honor it.
* tests/store.scm ("build multiple times"): New test.
2015-12-08 23:58:12 +01:00
Ludovic Courtès c499125704 gnu-maintenance: Exclude development releases from GNOME update candidates.
Suggested by Efraim Flashner <efraim@flashner.co.il>.

* guix/gnu-maintenance.scm (latest-ftp-release): Add #:keep-file?
parameter and honor it.
(latest-gnome-release)[%not-dot]: New variable.
[even-minor-version?, even-numbered-tarball?]: New procedures.
Pass EVEN-NUMBERED-TARBALL? as #:keep-file? argument.
2015-12-08 16:09:33 +01:00
Ludovic Courtès 6efa6f7645 gnu-maintenance: ftp.gnome.org does not provide signatures.
* guix/gnu-maintenance.scm (latest-ftp-release): Add #:file->signature
parameter.  Honor it.
(latest-gnome-release): Pass #:file->signature.
* guix/upstream.scm (coalesce-sources): Keep 'signature-urls' as #f
unless both sources provide it.
2015-12-07 23:57:20 +01:00
Ludovic Courtès e80c0f85ba gnu-maintenance: Add GNOME updater.
* guix/gnu-maintenance.scm (ftp-server/directory)[quirks]: Remove glib.
(false-if-ftp-error): New macro.
(latest-release*): Use it.
(non-emacs-gnu-package?): Rename to...
(pure-gnu-package?): ... this.  Add call to 'gnome-package?'.
(%gnu-updater): Adjust accordingly.
(gnome-package?, latest-gnome-release): New procedures.
(%gnome-updater): New variable.
* guix/scripts/refresh.scm (%updaters): Add %GNOME-UPDATER.
* doc/guix.texi (Invoking guix refresh): Mention it.
2015-12-07 23:32:01 +01:00
Ludovic Courtès e946f2ec92 gnu-maintenance: Generalize 'latest-ftp-release'.
* guix/gnu-maintenance.scm (latest-release): Rename to...
(latest-ftp-release): ... this.  Add #:server and #:directory
parameters.
(latest-release): New procedure.
2015-12-07 23:32:01 +01:00
Ludovic Courtès fba607b129 refresh: Bail out when asked for a nonexistent updater.
* guix/scripts/refresh.scm (lookup-updater): Call 'leave' when 'find'
returns #f.
2015-12-07 23:32:01 +01:00
Ludovic Courtès e3cc793e7c gnu-maintenance: Do not look for releases in "w32" sub-directories.
* guix/gnu-maintenance.scm (latest-release): Filter out "w32"
directories.
2015-12-07 23:32:01 +01:00
Ludovic Courtès 202440e07a gnu-maintenance: Add tests for 'release-file?'.
* tests/gnu-maintenance.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
* guix/gnu-maintenance.scm (release-file?): Export.
2015-12-07 23:32:01 +01:00