bcadaf0050
gnu: Add sortmerna.
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* gnu/packages/bioinformatics.scm (sortmerna): New variable.
2016-01-25 08:35:11 +10:00
447f3ae7c1
gnu: calibre: Update to 2.49.0.
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* gnu/packages/ebook.scm (calibre): Update to 2.49.0.
2016-01-24 20:12:05 +01:00
541ed7b030
gnu: cross-gcc-arguments: Enable C++, disable building of libstdc++-v3.
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* gnu/packages/cross-base.scm (cross-gcc-arguments)[arguments]: Disable
building libstdc++-v3 and enable building C++ compiler.
2016-01-24 14:25:20 +01:00
a763ce7da9
gnu: Add Qtractor.
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* gnu/packages/music.scm (qtractor): New variable.
2016-01-24 14:20:52 +01:00
8ddc5d5723
gnu: yoshimi: Update to 1.3.8.2.
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* gnu/packages/music.scm (yoshimi): Update to 1.3.8.2.
2016-01-24 14:19:29 +01:00
6b6a62dd05
gnu: privoxy: Update to 3.0.24.
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* gnu/packages/tor.scm (privoxy): Update to 3.0.24.
2016-01-24 09:20:55 +02:00
be866fb13e
gnu: tor: Update to 0.2.7.6.
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* gnu/packages/tor.scm (tor): Update to 0.2.7.6.
2016-01-24 07:21:33 +02:00
17206f72ed
gnu: myrepos: Update to 1.20160123.
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* gnu/packages/version-control.scm (myrepos): Update to 1.20160123.
2016-01-24 07:04:05 +02:00
4c73302739
gnu: nano: Update to 2.5.1.
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* gnu/packages/nano.scm (nano): Update to 2.5.1.
2016-01-24 06:46:01 +02:00
fe17fb4a2c
gnu: letsencrypt and acme: Update to 0.2.0.
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These packages should be updated together.
* gnu/packages/tls.scm (letsencrypt): Update to 0.2.0.
(acme): Update to 0.2.0.
2016-01-23 17:39:08 -05:00
21565719e5
gnu: claws-mail: Update to 3.13.2.
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* gnu/packages/mail.scm (claws-mail): Update to 3.13.2.
2016-01-23 20:13:31 +02:00
3a40a92c73
gnu: Add cufflinks.
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* gnu/packages/bioinformatics.scm (cufflinks): New variable.
2016-01-23 09:15:11 +01:00
94ce537eac
gnu: Add TopHat.
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* gnu/packages/bioinformatics.scm (tophat): New variable.
* gnu/packages/patches/tophat-build-with-later-seqan.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2016-01-23 08:53:10 +01:00
3062d750b4
gnu: star: Update to 2.5.1b.
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* gnu/packages/bioinformatics.scm (star): Update to 2.5.1b.
[source]: Remove bundled htslib sources and pre-built binaries.
[arguments]: Add phase "do-not-use-bundled-htslib".
[inputs]: Add "htslib".
2016-01-23 08:40:14 +01:00
c0266e8d03
gnu: star: Use "modify-phases" syntax.
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* gnu/packages/bioinformatics.scm (star)[arguments]: Use "modify-phases"
syntax.
2016-01-23 08:40:14 +01:00
ebf89f134c
gnu: fuse: Update to 2.9.5 [fixes CVE-2016-1233].
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* gnu/packages/linux.scm (fuse): Update to 2.9.5.
2016-01-22 09:00:34 +02:00
b6d937d99e
gnu: american-fuzzy-lop: Update to 1.96b.
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* gnu/packages/debug.scm (american-fuzzy-lop): Update to 1.96b.
[arguments]: Create symbolic link to custom qemu, rather than copying.
2016-01-21 23:54:48 -06:00
2d8211ab30
gnu: american-fuzzy-lop: Fix qemu configure flags.
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Fixes regression introduced in 06da1a6
2016-01-21 23:54:48 -06:00
765973cd65
gnu: Add iftop.
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* gnu/packages/admin.scm (iftop): New variable.
2016-01-21 20:21:19 -05:00
c2af02602a
Revert "gnu: Add iftop."
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This reverts commit 45da8c6dd1
2016-01-21 20:11:21 -05:00
45da8c6dd1
gnu: Add iftop.
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* gnu/packages/admin.scm (iftop): New variable.
2016-01-21 18:11:12 -05:00
3738d8700f
gnu: ffmpeg: Update to 2.8.5.
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* gnu/packages/video.scm (ffmpeg): Update to 2.8.5.
2016-01-21 10:30:21 -05:00
0c0207a93b
gnu: gajim: Update to 0.16.5 [fixes CVE-2015-8688].
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* gnu/packages/messaging.scm (gajim): Update to 0.16.5.
[arguments]: Disable tests.
2016-01-21 10:24:44 -05:00
6c92d8dd35
gnu: bind-utils: Build and install "nsupdate".
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* gnu/packages/dns.scm (bind-utils)[arguments]: Build and install
"nsupdate" executable.
2016-01-21 15:53:35 +01:00
bd0eb6672b
gnu: bind-utils: Generalize "build" and "install" phases.
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* gnu/packages/dns.scm (bind-utils)[arguments]: Generalize "build" and
"install" phases.
2016-01-21 15:53:35 +01:00
b2844d8f14
gnu: bind-utils: Use "modify-phases" syntax.
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* gnu/packages/dns.scm (bind-utils): Use "modify-phases" syntax.
2016-01-21 15:53:35 +01:00
897092875e
gnu: r-qtl: Update to 1.38-4.
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* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.38-4.
2016-01-21 11:16:12 +01:00
1207a0c33e
gnu: libxmp: Update to 4.3.10.
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* gnu/packages/audio.scm (libxmp): Update to 4.3.10.
2016-01-21 00:44:46 -05:00
7ed0145712
gnu: Add NQC.
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* gnu/packages/lego.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2016-01-20 22:06:27 -06:00
feb767b23c
gnu: Add transmission-remote-cli.
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* gnu/packages/bittorrent.scm (transmission-remote-cli): New variable.
2016-01-20 20:19:46 -05:00
80b64ee2d8
gnu: isc-dhcp: Update bundled bind to 9.9.8-P3 [fixes CVE-2015-8704].
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* gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.8-P3.
2016-01-20 14:58:40 -05:00
d912db5bc0
gnu: bind-utils: Update to 9.10.3-P3 [fixes CVE-2015-8704].
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* gnu/packages/dns.scm (bind-utils): Update to 9.10.3-P3.
2016-01-20 14:57:06 -05:00
beed3af565
gnu: linux-libre: Add fix for CVE-2016-0728.
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* gnu/packages/patches/linux-libre-CVE-2016-0728.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (linux-libre)[source]: Add patch.
2016-01-20 13:23:42 -05:00
d4df203292
gnu: obs: Add support for webcams.
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* gnu/packages/video.scm (obs)[inputs]: Add v4l-utils.
2016-01-20 11:46:45 -05:00
945d985aab
gnu: Add v4l-utils.
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* gnu/packages/video.scm (v4l-utils): New variable.
2016-01-20 11:46:45 -05:00
f32ee38fcd
gnu: arb: Correct patch.
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* gnu/packages/patches/arb-ldconfig.patch: Correct erroneously committed file.
This is a follow-up to commit ffc8f34511
2016-01-20 16:57:17 +01:00
ffc8f34511
gnu: arb: Update to 2.8.1.
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* gnu/packages/algebra.scm (arb)[source]: Update to 2.8.1. Add patch.
* gnu/packages/patches/arb-ldconfig.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
2016-01-20 16:33:34 +01:00
4c3d2b2a8f
gnu: enlightenment: Update to 0.20.3.
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* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.3.
2016-01-20 12:37:21 +02:00
0568dbabe0
gnu: libshout: Update to 2.4.1.
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* gnu/packages/xiph.scm (libshout): Update to 2.4.1.
2016-01-20 02:12:23 +02:00
1c3d37e648
gnu: opusfile: Update to 0.7.
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* gnu/packages/xiph.scm (opusfile): Update to 0.7.
2016-01-20 02:12:23 +02:00
275cc09280
gnu: opus: Update to 1.1.2.
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* gnu/packages/xiph.scm (opus): Update to 1.1.2.
2016-01-20 02:12:23 +02:00
55ca5e8095
gnu: lilypond: Double 'max-silent-time'.
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Suggested by Mark H Weaver <mhw@netris.org>.
* gnu/packages/music.scm (lilypond)[properties]: New field.
2016-01-19 22:14:15 +01:00
16966d5b4d
gnu: fdm: Adjust license link to point to web-accessible copy of command.c
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* gnu/packages/mail.scm (fdm): Adjusted license field
2016-01-19 07:54:18 -08:00
34dd26af49
gnu: Add fdm.
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* gnu/packages/mail.scm (fdm): New variable.
2016-01-18 21:51:45 -08:00
1348185ac2
gnu: Add linux-libre-4.2.5
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* gnu/packages/linux.scm (linux-libre-4.2.5): New variable.
2016-01-18 15:10:38 -08:00
26da7c2606
gnu: mpv: Update to 0.15.0.
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* gnu/packages/video.scm (mpv): Update to 0.15.0.
2016-01-18 22:26:56 +02:00
60edbe2297
gnu: magit: Update to 2.4.0.
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* gnu/packages/emacs.scm (magit): Update to 2.4.0.
2016-01-18 22:40:33 +03:00
d44d60d211
gnu: sxiv: Update to 1.3.2.
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* gnu/packages/sxiv.scm (sxiv): Update to 1.3.2.
2016-01-18 22:40:33 +03:00
4c896c9195
gnu: manaplus: Update to 1.6.1.16.
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* gnu/packages/games.scm (manaplus): Update to 1.6.1.16.
2016-01-18 22:40:33 +03:00
264ae686fa
python2-jsonschema: Add python2-functools32 to inputs.
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* gnu/packages/python.scm (python2-jsonschema)[inputs]: Add
python2-functools32.
(python2-wheel)[native-inputs]: Specify python2-jsonschema. Add
python2-functools32.
(python2-requests)[propagated-inputs]: Specify python2-wheel.
(python2-ipython)[inputs]: Specify python2-jsonschema, python2-requests.
(python2-rauth)[propagated-inputs]: Specify python2-requests.
* gnu/packages/openstack.scm (python2-requests-mock)[propagated-inputs]:
Specify python2-requests.
(python2-tempest-lib)[propagated-inputs]: Specify python2-jsonschema.
(python2-oslosphinx)[propagated-inputs]: Specify python2-requests.
(python2-keystoneclient)[porpagated-inputs]: Specify python2-requests.
[native-inputs]: Specify python2-oslosphinx, python2-requests-mock,
python2-tempest-lib.
(python2-swiftclient)[propagated-inputs]: Specify python2-requests,
python2-oslosphinx.
2016-01-18 17:23:37 +02:00
Ben Woodcroft