78c0d323e9
gnu: python-pandas: Update to 0.18.0.
...
* gnu/packages/python.scm (python-pandas, python2-pandas): Update to 0.18.0.
[arguments]: Enable tests.
2016-04-03 16:08:11 +10:00
fd7575d479
gnu: pspp: Update to 0.10.1.
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* gnu/packages/maths.scm (pspp): Update to 0.10.1.
2016-04-03 08:47:35 +03:00
e94616b996
gnu: iso-codes: Update to 3.67.
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* gnu/packages/iso-codes.scm (iso-codes): Update to 3.67.
[inputs]: Replace python-2 with python-wrapper.
[home-page]: Use https.
2016-04-03 07:43:41 +03:00
0736643424
gnu: transmission: Move '.desktop' file to the "gui" output.
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Fixes <http://bugs.gnu.org/23066 >.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.
* gnu/packages/bittorrent.scm (transmission)[arguments]: In 'move-gui',
move 'share/applications' to the 'gui' output.
2016-04-02 22:40:18 +02:00
8463d1345e
graph: Edges are colored based on their source node.
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* guix/graph.scm (%colors): New variable.
(pop-color): New procedure.
(emit-edge): Use it.
2016-04-02 22:40:18 +02:00
451c1436a3
gnu: mc: Update to 4.8.16.
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* gnu/packages/mc.scm (mc): Update to 4.8.16.
[source]: Remove patch.
* gnu/packages/patches/mc-fix-ncurses-build.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
2016-04-02 23:39:32 +03:00
57818b6e3c
gnu: gnucash: Update to 2.6.12.
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* gnu/packages/gnucash.scm (gnucash): Update to 2.6.12.
[home-page]: Update to new homepage.
2016-04-02 22:10:29 +03:00
a754eaf16d
gnu: ruby-2.1: Update to 2.1.10.
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* gnu/packages/ruby.scm (ruby-2.1): Update to 2.1.10.
2016-04-02 09:16:17 +10:00
f04433773d
gnu: glpk: Update to 4.60.
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* gnu/packages/maths.scm (glpk): Update to 4.60.
2016-04-01 16:52:54 +03:00
915363a3e2
gnu: wicd: Add template for WPA2-TTLS.
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* gnu/packages/patches/wicd-wpa2-ttls.patch: New file.
* gnu/packages/wicd.scm (wicd)[source]: Add it.
* gnu-system.am (dist_patch_DATA): Add it.
2016-04-01 13:59:58 +02:00
f5480572d0
gnu: wicd: Update to 1.7.4.
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* gnu/packages/wicd.scm (wicd): Update to 1.7.4.
[source]: Remove 'wicd-template-instantiation.patch'.
* gnu/packages/patches/wicd-template-instantiation.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
2016-04-01 13:59:58 +02:00
dbeaf8f203
gnu: postgresql: Update to 9.5.2. [fixes CVE-2016-2193, CVE-2016-3065]
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* gnu/packages/databases.scm (postgresql): Update to 9.5.2.
2016-04-01 13:57:21 +03:00
6499b70ebf
gnu: Add r-ztable.
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* gnu/packages/statistics.scm (r-ztable): New variable.
2016-04-01 11:46:19 +02:00
ec67294611
gnu: Add jq.
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* gnu/packages/web.scm: (jq): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2016-04-01 11:56:30 +03:00
2d8cf0b3e7
gnu: Add oniguruma.
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* gnu/packages/textutils.scm (oniguruma): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2016-04-01 11:38:06 +03:00
52af45adeb
gnu: fontforge: Build fonts bit-reproducibly.
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* gnu/packages/fontutils.scm (fontforge)[source](snippet): Modify
tottf.c.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-04-01 00:05:42 +02:00
2cdeecbe4d
gnu: move miscfiles into gnu-doc.scm
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* gnu/packages/miscfiles.scm: Remove file.
* gnu-sytem.am: Remove it.
* gnu/packages/gnu-doc.scm (miscfiles): Move here.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-04-01 00:05:42 +02:00
ec0730cb67
gnu: Add gnu-standards.
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* gnu/packages/gnu-doc.scm: New file.
* gnu-system.am: Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-04-01 00:05:42 +02:00
f4033fb5da
cvs: Disable compression.
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Reported by Jan Nieuwenhuizen <janneke@gnu.org>.
* guix/build/cvs.scm (cvs-fetch): Use -z0.
2016-04-01 00:05:42 +02:00
ab83105bbe
cvs: Allow checkouts when /tmp is a different device.
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* guix/build/cvs.scm (cvs-fetch): Use 'copy-recursively' instead of
'rename-file'.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-04-01 00:05:42 +02:00
47268eec13
gnu: font-gnu-freefont-ttf: Update to 20120503 and build from source.
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* gnu/packages/fonts.scm (font-gnu-freefont-ttf): Update to 20120503.
[arguments]: Build from source.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-04-01 00:05:42 +02:00
97425486ee
profiles: Use the right 'package-name->name+version'.
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* guix/profiles.scm: Use 'package-name->name+version' from (guix build
utils). Fixes 'find-among-store-items' in 'gtk-icon-themes'.
2016-04-01 00:05:42 +02:00
b5afe6f031
gnu: gnupg-2.0: Update to 2.0.30.
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* gnu/packages/gnupg.scm (gnupg-2.0): Update to 2.0.30.
2016-03-31 21:14:25 +03:00
9941e0812e
ant-build-system: Keep jar manifest.
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* guix/build/ant-build-system.scm (default-build.xml): Generate default
manifest.
(strip-jar-timestamps): Repack jar archive with zip.
2016-03-31 15:47:39 +02:00
ab50bba9f6
build-system/ant: Add zip.
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* guix/build-system/ant.scm (default-zip): New variable.
(lower): Add zip to native inputs.
2016-03-31 15:47:32 +02:00
cb6ce89e21
build-system/r: Support "substitutable?" flag.
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* guix/build-system/r.scm (r-build): Support the "substitutable?" flag.
2016-03-31 15:47:19 +02:00
d0457553d5
gnu: Add nmap.
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* gnu/packages/admin.scm (nmap): New variable.
Co-authored-by: Leo Famulari <leo@famulari.name>
2016-03-31 02:08:56 -04:00
dcd19c0af8
licenses: Add the nmap license.
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* guix/licenses.scm (nmap): New variable.
2016-03-31 01:40:30 -04:00
42efe27a30
import: Add Hackage updater.
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* guix/import/hackage.scm (guix-package->hackage-name, hackage-package?)
(latest-release): New procedures.
(%hackage-updater): New variable.
* guix/scripts/refresh.scm (%updaters): Add it.
* doc/guix.texi (Invoking guix refresh): Mention it.
2016-03-30 23:19:24 -05:00
2ae9c63f15
import: hackage: Silence download output.
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* guix/import/hackage.scm (hackage-fetch): Use http-fetch to avoid
progress output from url-fetch.
2016-03-30 23:19:24 -05:00
f9ea74ad04
import: hackage: Factorize url synthesis.
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* guix/import/hackage.scm (hackage-source-url, hackage-cabal-url): New
procedures.
(hackage-fetch, hackage-module->sexp): Use them.
2016-03-30 23:19:24 -05:00
4827b36d1f
doc: Small fixes for typos and missing words.
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* doc/guix.texi (The Store Monad): Add a dot at the end of a sentence.
(The Store Monad): Add "are" to make a complete sentence.
(G-Expressions): Fix typo.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-03-30 23:39:47 +02:00
8a46205b41
doc: Clarify how to use the '#:python' parameter.
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* doc/guix.texi (Build Systems): Clearly distinguish between the package that
provides the Python interpreter for the build and the package that is to be
built. Also, mention why one might want to use a specific Python version.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-03-30 23:39:47 +02:00
12af303f47
gnu: Add python2-s3cmd.
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* gnu/packages/python.scm (python2-s3cmd): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-03-30 23:39:47 +02:00
daeeea7154
gnu: Add python-magic.
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* gnu/packages/python.scm (python-magic, python2-magic): New variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-03-30 23:39:47 +02:00
3bd9672c85
ui: Add comment on the translation of "current".
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* guix/ui.scm (display-generation): Add "TRANSLATORS" comment.
2016-03-30 23:39:47 +02:00
d006e307b9
doc: Fix URL of gnutls-guile one-page-per-node manual.
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* doc/htmlxref.cnf: Fix gnutls-guile 'node' URL.
2016-03-30 23:39:47 +02:00
21d1811301
gnu: Add MilkyTracker.
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* gnu/packages/music.scm (milkytracker): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2016-03-30 23:45:44 +03:00
ddb8312911
gnu: python2-pbcore: Update to 1.2.8.
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* gnu/packages/bioinformatics.scm (python2-pbcore): Update to 1.2.8.
[native-inputs]: Add python2-docutils, python2-nose, python2-sphinx.
2016-03-30 22:45:35 +03:00
96e9f097ee
gnu: linux-libre: Avoid introducing timestamps into the build.
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* gnu/packages/linux.scm (linux-libre)[build-phase]: Set the
KCONFIG_NOTIMESTAMP and KBUILD_BUILD_TIMESTAMP environment variables to
avoid introducing timestamps into the build outputs.
2016-03-30 15:22:04 -04:00
aa2a0d4bb8
environment: Set a default value for PS1.
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* guix/scripts/environment.scm (launch-environment/container): Set PS1
during container initialization.
2016-03-30 09:09:40 -04:00
8caf80fcf4
gnu: libcue: Fix source url.
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* gnu/packages/cdrom.scm (libcue)[source]: Fix url.
[home-page]: Project has moved to Github.
2016-03-30 13:39:42 +03:00
fa9f0e6c25
gnu: r-devtools: Update to 1.10.0.
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* gnu/packages/statistics.scm (r-devtools): Update to 1.10.0.
(r-devtools)[propagated-inputs]: Add r-withr.
2016-03-30 12:02:40 +02:00
a080e50c15
gnu: Add r-withr.
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* gnu/packages/statistics.scm (r-withr): New variable.
2016-03-30 12:02:28 +02:00
f315f4fcab
gnu: r-genomation: Update to 1.2.2.
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* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.2.2.
2016-03-30 11:59:16 +02:00
571f0b63d5
gnu: r-genomicfeatures: Update to 1.22.13.
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* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to
1.22.13.
2016-03-30 11:59:16 +02:00
ffaf72ad96
gnu: r-rtracklayer: Update to 1.30.4.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.30.4.
2016-03-30 11:59:15 +02:00
ac2d8b0fb8
gnu: r-genomicalignments: Update to 1.6.3.
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* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to
1.6.3.
2016-03-30 11:59:15 +02:00
7eade1c5f9
gnu: r-summarizedexperiment: Update to 1.0.2.
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* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to
1.0.2.
2016-03-30 11:59:15 +02:00
53fd0f5e1d
gnu: r-biostrings: Update to 2.38.4.
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* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.38.4.
2016-03-30 11:59:15 +02:00
Ben Woodcroft