Commit Graph

35155 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice c8749b0250
gnu: Add perl-mock-config.
* gnu/packages/perl-check.scm (perl-mock-config): New public variable.
2018-09-12 16:09:37 +02:00
Efraim Flashner b2c8d31ff6
gnu: perl-moosex-getopt: Update to 0.73.
* gnu/packages/perl.scm (perl-moosex-getopt): Update to 0.73.
[native-inputs]: Add perl-module-build-tiny, perl-path-tiny,
perl-test-needs.
2018-09-12 10:28:47 +03:00
Eric Bavier 50b3b83143
netsurf: Register patch.
Follow-up to f9e140a243.

* gnu/local.mk (dist_patch_DATA): Add netsurf-message-timestamp.patch.
2018-09-11 20:29:04 -05:00
Eric Bavier bbe46a4af5
mpi: Factorize openmpi setup build phase.
* gnu/packages/mpi.scm (%openmpi-setup): New variable.
* gnu/packages/maths.scm (scalapack, slepc-openmpi, mumps-openmpi)
(superlu-dist, p4est, petsc-openmpi, hypre-openmpi, elemental)
(sundials-openmpi, arpack-ng-openmpi)[arguments]: Use it in #:phases.
2018-09-11 20:29:04 -05:00
Eric Bavier 5882078e8c
font-fantasque-sans: Upgrade to 1.7.2.
* gnu/packages/fonts.scm (font-fantasque-sans): Upgrade to 1.7.2.
[native-inputs]: Add zip.
[arguments]: Add 'xrange->range phase for python3 compatibility.  Adjust
install phase to work with newly generated font variants.
2018-09-11 20:29:03 -05:00
Pierre Neidhardt 2b0820bf0d
gnu: emacs-helm: Update to 3.0.
* gnu/packages/emacs.scm (emacs-helm): Update to 3.0.
2018-09-11 23:53:35 +02:00
Pierre Neidhardt ee0d184502
gnu: Add emacs-hackernews.
* gnu/packages/emacs.scm (emacs-hackernews): New variable.
2018-09-11 23:53:35 +02:00
Pierre Neidhardt bd8f74dfbe
gnu: emacs-evil-collection: Update to 20180911.
* gnu/packages/emacs.scm (emacs-evil-collection): Update to 20180911.
2018-09-11 23:53:35 +02:00
Pierre Neidhardt ac9e307740
gnu: emacs-magit-todos: Update to 1.1.
* gnu/packages/emacs.scm (emacs-magit-todos): Update to 1.1.
2018-09-11 23:53:35 +02:00
Pierre Neidhardt 475e16578f
gnu: emacs-helm-system-packages: Update to 1.10.1.
* gnu/packages/emacs.scm (emacs-helm-system-packages): Update to 1.10.1.
2018-09-11 23:53:35 +02:00
Ricardo Wurmus 1afd1fbf3c
guix: Do not close current-error-port.
Reported-by: Ludovic Courtès <ludo@gnu.org>.

* guix/scripts/build.scm (guix-build),
guix/scripts/package.scm (guix-package): Duplicate port before handing it to
build-output-port.
2018-09-11 23:19:42 +02:00
Ricardo Wurmus f72e5f93b7
ui: Do not filter hash mismatch lines.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.

* guix/ui.scm (build-output-port): Add pattern for hash mismatch error; be
more careful with error messages in verbose mode.
2018-09-11 23:19:42 +02:00
Jan Nieuwenhuizen 4a67079f71
gnu: mes: Oops, use mirror://gnu download url.
* gnu/packages/mes.scm (mes): Oops, use mirror://gnu download url.
2018-09-11 22:34:02 +02:00
Tobias Geerinckx-Rice a855117c59
gnu: snakemake: Update home page.
* gnu/packages/python.scm (snakemake)[home-page]: Update.
2018-09-11 21:12:43 +02:00
Tobias Geerinckx-Rice 9b83c15afe
gnu: snakemake: Update to 5.2.2.
* gnu/packages/python.scm (snakemake): Update to 5.2.2.
2018-09-11 21:03:08 +02:00
Tobias Geerinckx-Rice a93de1ae9e
gnu: obnam: Add deprecation warning.
* gnu/packages/backup.scm (obnam)[synopsis, description]: Note its
retirement.
2018-09-11 21:03:07 +02:00
Tobias Geerinckx-Rice cd1e138cc6
gnu: unbound: Update to 1.8.0.
* gnu/packages/dns.scm (unbound): Update to 1.8.0.
2018-09-11 21:03:07 +02:00
Tobias Geerinckx-Rice 702a87f2d1
gnu: perl-dbd-mysql: Update to 4.047.
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.047.
[arguments]: Add 'skip-library-detection' phase.
2018-09-11 21:03:07 +02:00
Jonathan Brielmaier 52b0a352c3
gnu: libreoffice: Update to 6.1.0.3.
* gnu/packages/libreoffice.scm (libreoffice): Update to 6.1.0.3.
[source]: Correct indenting.
[inputs]: Add libnumbertext and python-lxml.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 17:46:30 +02:00
Jonathan Brielmaier aeba7d4650
gnu: Add libnumbertext.
* gnu/packages/libreoffice.scm (libnumbertext): New public variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 17:46:30 +02:00
Paul Garlick aa82260bc0
gnu: arpack-ng-openmpi: Fix build.
* gnu/packages/maths.scm (arpack-ng-openmpi)[arguments]: Add
'set-test-environment phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 17:46:29 +02:00
Tim Gesthuizen d2fe71b04d
gnu: Add emacs-irony-mode.
* gnu/packages/emacs.scm (emacs-irony-mode): New variable.
(emacs-irony-mode-server): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 17:46:28 +02:00
Ludovic Courtès 8539eb5c46
gnu: jupyter-guile-kernel: Add dependencies to the search path.
This allows:

  guix environment --ad-hoc jupyter jupyter-guile-kernel \
    -- jupyter notebook

to work out-of-the-box.

* gnu/packages/guile.scm (jupyter-guile-kernel)[arguments]: In
'install-kernel' phase, add '-L' and '-C' flags to 'kernel.json'.
[propagated-inputs]: Remove.
[inputs]: Add GUILE-JSON and GUILE-SIMPLE-ZMQ.
2018-09-11 17:46:28 +02:00
Ludovic Courtès 828fa94d7a
gnu: guile-simple-zmq, jupyter-guile-kernel: Update to 5bb66a0 and a7db924.
* gnu/packages/guile.scm (guile-simple-zmq): Update to 5bb66a0.
(jupyter-guile-kernel): Update to a7db924.
2018-09-11 17:46:28 +02:00
Mădălin Ionel Patrașcu 01af264dcb
gnu: Add r-svgui.
* gnu/packages/cran.scm (r-svgui): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-09-11 17:27:10 +02:00
Marius Bakke f6b7ccc9f9
gnu: spice: Update to 0.14.1 [fixes CVE-2018-10873].
* gnu/packages/spice.scm (spice): Update to 0.14.1.
[source](uri): Update to new "spice-server" subdirectory.
[native-inputs]: Add GLIB-NETWORKING and GSETTINGS-DESKTOP-SCHEMAS.
[arguments]: Remove configure-flag which is now off even when celt is
available.  Add phase to set $SSL_CERT_FILE.
2018-09-11 14:12:53 +02:00
Marius Bakke 41a659d2ec
gnu: usbredir: Update to 0.8.0.
* gnu/packages/spice.scm (usbredir): Update to 0.8.0.
[source]: Use URL-FETCH.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and LIBTOOL.
[arguments]: Remove.
2018-09-11 14:12:53 +02:00
Leo Famulari b4ff75b507
gnu: syncthing: Update to 0.14.50.
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.50.
2018-09-11 03:24:46 -04:00
Leo Famulari e76709f71f
gnu: go-github-com-syncthing-notify: Update to 0.0.0-2.b76b458.
* gnu/packages/syncthing.scm (go-github-com-syncthing-notify): Update to
0.0.0-2.b76b458.
2018-09-11 03:24:42 -04:00
Leo Famulari 091ef8c97e
gnu: VLC: Update to 3.0.4.
* gnu/packages/video.scm (vlc): Update to 3.0.4.
2018-09-10 19:24:51 -04:00
Leo Famulari 5d9c28f117
gnu: git: Update to 2.19.0.
* gnu/packages/version-control.scm (git): Update to 2.19.0.
(cgit)[inputs]: Use the source of Git 2.18.0.
2018-09-10 19:02:45 -04:00
Ludovic Courtès 2225d56a14
profiles: Correctly deal with etc/ being a relative symlink.
Fixes <https://bugs.gnu.org/32686>.
Reported by Oleg Pykhalov <go.wigust@gmail.com>.

* guix/build/profiles.scm (ensure-writable-directory): Add #:symlink.
[absolute?]: New procedure.
[unsymlink]: Use it to determine how to resolve readlink's result.
(build-profile): Pass SYMLINK to 'ensure-writable-directory'.
* tests/profiles.scm ("profile-derivation when etc/ is a relative symlink"):
New test.
2018-09-11 00:14:58 +02:00
pimi cbb0edd1be
gnu: Add r-abd.
* gnu/packages/cran.scm (r-abd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 00:14:58 +02:00
pimi 6c6ce2d088
gnu: Add r-mosaic.
* gnu/packages/cran.scm (r-mosaic): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 00:14:58 +02:00
pimi 2f195b6f23
gnu: Add r-mosaicdata.
* gnu/packages/cran.scm (r-mosaicdata): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-11 00:14:58 +02:00
Ricardo Wurmus d54145c38a
gnu: guitarix: Update to 0.37.3.
* gnu/packages/audio.scm (guitarix): Update to 0.37.3.
[inputs]: Add curl.
2018-09-10 23:58:14 +02:00
Thorsten Wilms 029de52fe9
gnu: guitarix-lv2: Use correct configure flag.
* gnu/packages/audio.scm (guitarix-lv2)[arguments]: Change configure flag.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-09-10 23:58:14 +02:00
Tobias Geerinckx-Rice 2740549754
gnu: kakoune: Use HTTPS home page.
* gnu/packages/text-editors.scm (kakoune)[home-page]: Use HTTPS.
2018-09-10 22:54:36 +02:00
Tobias Geerinckx-Rice b38827096f
gnu: mcrl2: Use HTTPS home page.
* gnu/packages/maths.scm (mcrl2)[home-page]: Use HTTPS.
2018-09-10 22:54:36 +02:00
Tobias Geerinckx-Rice 4105f13bb5
gnu: tor: Update to 0.3.4.8.
* gnu/packages/tor.scm (tor): Update to 0.3.4.8.
2018-09-10 22:54:35 +02:00
Tobias Geerinckx-Rice 695775b138
gnu: kakoune: Update to 2018.09.04.
* gnu/packages/text-editors.scm (kakoune): Update to 2018.09.04.
2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice 4b41568fa5
gnu: python-binaryornot: Update to 0.4.4.
* gnu/packages/python.scm (python-binaryornot): Update to 0.4.4.
2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice 86788cb0c9
gnu: python-parse: Update to 1.8.4.
* gnu/packages/python.scm (python-parse): Update to 1.8.4.
2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice c0ea7f5ff4
gnu: python-parse: Mark up description.
* gnu/packages/python.scm (python-parse)[description]: Use @code{}.
2018-09-10 22:15:20 +02:00
Tobias Geerinckx-Rice cc12ac58a2
gnu: python-jedi: Update to 0.12.1.
* gnu/packages/python.scm (python-jedi): Update to 0.12.1.
[synopsis, description]: Adjust to expanded functionality.
2018-09-10 22:15:19 +02:00
Tobias Geerinckx-Rice 7a6eaf5ca9
gnu: python-parso: Update to 0.3.1.
* gnu/packages/python.scm (python-parso): Update to 0.3.1.
2018-09-10 22:15:19 +02:00
Tobias Geerinckx-Rice d56eee862b
gnu: qtractor: Update to 0.9.2.
* gnu/packages/music.scm (qtractor): Update to 0.9.2.
[arguments]: Remove obsolete Qt 5.11 workaround.
2018-09-10 22:15:19 +02:00
Leo Famulari 875d068176
Adjust all users of (gnu packages ldc) to use (gnu packages dlang).
This is a followup to commit 98d6543f86.

* gnu/packages/bioinformatics.scm, guix/build-system/dub.scm: Adjust
accordingly.
2018-09-10 15:44:32 -04:00
Marius Bakke c5e4b4cc8f
gnu: Add libabigail.
* gnu/packages/elf.scm (libabigail): New public variable.
2018-09-10 20:27:42 +02:00
Marius Bakke fc449407fe
gnu: python-debian: Update home page.
* gnu/packages/python.scm (python-debian)[home-page]: Set to source
repository.
2018-09-10 20:27:42 +02:00