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13007 Commits

Author SHA1 Message Date
Leo Famulari 5d88b4f8a8
gnu: mysql: Update to 5.7.12. 
Fixes CVE-2016-0639, CVE-2016-0642, CVE-2016-0643, CVE-2016-0647,
CVE-2016-0648, CVE-2016-0655, CVE-2016-0657, CVE-2016-0659, CVE-2016-0662,
CVE-2016-0666, CVE-2016-0667, CVE-2016-0705, CVE-2016-2047.

* gnu/packages/databases.scm (mysql): Update to 5.7.12.
 2016-04-27 13:53:56 -04:00
Ludovic Courtès 93cba30ca4
build: 'assert-' targets now depend on the .go files. 
* Makefile.am (assert-binaries-available)
(assert-final-inputs-self-contained): Add dependency on $(GOBJECTS).
 2016-04-27 15:09:15 +02:00
Ludovic Courtès 82191844cd
Merge branch 'gnome-updates' 2016-04-27 15:04:11 +02:00
Ludovic Courtès f1ebeee131
build: 'make assert-binaries-available' shows the list of systems. 
* build-aux/check-available-binaries.scm: Display %HYDRA-SUPPORTED-SYSTEMS.
 2016-04-27 15:00:49 +02:00
Ludovic Courtès f0b8689884
gnu: blender: Build against ffmpeg 2.8. 
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/graphics.scm (blender)[inputs]: Use FFMPEG-2.8 instead of
FFMPEG.
 2016-04-27 14:17:56 +02:00
Ludovic Courtès 7de1f10363
gnu: Add missing synopses and descriptions. 
* gnu/packages/bootstrap.scm (package-from-tarball)
(%bootstrap-glibc, %bootstrap-gcc): Set 'description' field.
* gnu/packages/make-bootstrap.scm (%bootstrap-tarballs): Set 'synopsis'
and 'description'.
 2016-04-27 11:57:48 +02:00
Ludovic Courtès 20be23c3b6
lint: Report synopses/descriptions that are not strings. 
Suggested by John Darrington.

* guix/scripts/lint.scm (check-description-style): Emit a warning when
DESCRIPTION is not a string.
(check-synopsis-style): Likewise.
(check-gnu-synopsis+description): Likewise.
* tests/lint.scm ("description: not a string", "synopsis: not a
string"): New tests.
 2016-04-27 11:57:48 +02:00
Roel Janssen 068e476f68 gnu: Add java-xz. 
* gnu/packages/java.scm (java-xz): New variable.
 2016-04-27 10:52:34 +02:00
Ricardo Wurmus 5135354f62 gnu: python-ly: Update to 0.9.4. 
* gnu/packages/python.scm (python-ly): Update to 0.9.4.
 2016-04-27 10:40:23 +02:00
Ben Woodcroft 416381daa2 gnu: ruby-2.2: Update to 2.2.5. 
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.5.
[origin]: Remove snippet.
 2016-04-27 17:39:05 +10:00
Leo Famulari 8e740bca65
gnu: icedtea-8: Update to 3.0.1. 
Fixes CVE-2016-0686, CVE-2016-0687, CVE-2016-0695, CVE-2016-3425,
CVE-2016-3426, CVE-2016-3427.

* gnu/packages/java.scm (icedtea-8): Update to 3.0.1.
 2016-04-27 01:43:08 -04:00
Leo Famulari 0a0b5ebed2
gnu: icedtea-7: Update to 2.6.6. 
Fixes CVE-2016-0686, CVE-2016-0687, CVE-2016-0695, CVE-2016-3425, CVE-2016-3427.

* gnu/packages/java.scm (icedtea-7): Update to 2.6.6.
 2016-04-27 00:15:33 -04:00
Ricardo Wurmus 1d6c6af0e2 gnu: Add gimp-fourier. 
* gnu/packages/gimp.scm (gimp-fourier): New variable.
 2016-04-26 22:18:00 +02:00
Ricardo Wurmus c30a66dedb gnu: Add Aria Maestosa. 
* gnu/packages/music.scm (aria-maestosa): New variable.
 2016-04-26 22:16:24 +02:00
Ricardo Wurmus fc7c74e43d gnu: wxwidgets: Enable webview support. 
* gnu/packages/wxwidgets.scm (wxwidgets)[inputs]: Add webkitgtk-2.4.
[arguments]: Add configure flags to enable webview via the webkitgtk
backend.
 2016-04-26 22:15:25 +02:00
Ricardo Wurmus 2729509003 gnu: java-swt: Update to 4.5. 
* gnu/packages/java.scm (java-swt): Update to 4.5.
 2016-04-26 21:27:15 +02:00
Ricardo Wurmus 4b2eede485 gnu: frescobaldi: Update to 2.19.0. 
* gnu/packages/music.scm (frescobaldi): Update to 2.19.0.
 2016-04-26 21:12:49 +02:00
Ricardo Wurmus c5ad883b16 gnu: r-rcpparmadillo: Update to 0.6.700.3.0. 
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 6.700.3.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.3.0.
 2016-04-26 17:06:18 +02:00
Ricardo Wurmus 2c81794ed9 gnu: r-plotly: Update to 3.4.13. 
* gnu/packages/statistics.scm (r-plotly): Update to 3.4.13.
[propagated-inputs]: Add r-hexbin, r-scales, and r-tidyr.
 2016-04-26 17:06:18 +02:00
Ricardo Wurmus 59bf9f4e6b gnu: r-httr: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-httr): Update to 1.1.0.
[propagated-inputs]: Add r-openssl.
 2016-04-26 17:06:18 +02:00
Ricardo Wurmus 44d792c2e9 gnu: r-r6: Update to 2.1.2. 
* gnu/packages/statistics.scm (r-r6): Update to 2.1.2.
[propagated-inputs]: Remove.
 2016-04-26 17:06:18 +02:00
Ricardo Wurmus 99eca2b18b gnu: r-testthat: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-testthat): Update to 1.0.0.
[propagated-inputs]: Add r-magrittr, r-praise, and r-r6.
 2016-04-26 17:06:18 +02:00
Ricardo Wurmus 0fc4213642 gnu: r-viridis: Update to 0.3.4. 
* gnu/packages/statistics.scm (r-viridis): Update to 0.3.4.
 2016-04-26 17:06:18 +02:00
Ricardo Wurmus 3646bf2082 gnu: r-matrixstats: Update to 0.50.1. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.50.1.
 2016-04-26 17:06:18 +02:00
Ricardo Wurmus 799ef55b15 gnu: r-r-rsp: Update to 0.21.0. 
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.21.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 801e9e7399 gnu: r-r-utils: Update to 2.3.0. 
* gnu/packages/statistics.scm (r-r-utils): Update to 2.3.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus b2436f6af9 gnu: r-r-oo: Update to 1.20.0. 
* gnu/packages/statistics.scm (r-r-oo): Update to 1.20.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 887d45d466 gnu: r-r-methodss3: Update to 1.7.1. 
* gnu/packages/statistics.scm (r-r-methodss3): Update to 1.7.1.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 1e4abc0fee gnu: r-xml: Update to 3.98-1.4. 
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.4.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 1647e10ebd gnu: r-gridextra: Update to 2.2.1. 
* gnu/packages/statistics.scm (r-gridextra): Update to 2.2.1.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 810e4195fd gnu: r-gtable: Update to 0.2.0. 
* gnu/packages/statistics.scm (r-gtable): Update to 0.2.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 0d1ffadc1d gnu: r-rmarkdown: Update to 0.9.5. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 0.9.5.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 408c2d6937 gnu: r-plotrix: Update to 3.6-1. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-1.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus cf3568a05d gnu: r-devtools: Update to 1.11.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.11.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus b5c574c61d gnu: r-rstudioapi: Update to 0.5. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.5.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 06a4af1283 gnu: r-git2r: Update to 0.14.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.14.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 904fa49de6 gnu: r-roxygen2: Update to 5.0.1. 
* gnu/packages/statistics.scm (r-roxygen2): Update to 5.0.1.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 2448c723b7 gnu: r-cluster: Update to 2.0.4. 
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.4.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 618dbdd7c0 gnu: r-memoise: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-memoise): Update to 1.0.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 8e4edf0802 gnu: r-microbenchmark: Update to 1.4-2.1. 
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-2.1.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus bb61b765c0 gnu: r-knitr: Update to 1.12.3. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.12.3.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 1cfa88e988 gnu: r-formatr: Update to 1.3. 
* gnu/packages/statistics.scm (r-formatr): Update to 1.3.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 49089e06ec gnu: r-evaluate: Update to 0.8.3. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.8.3.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 2c8fa9d702 gnu: r-bh: Update to 1.60.0-1. 
* gnu/packages/statistics.scm (r-bh): Update to 1.60.0-1.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus b268e49691 gnu: r-ggplot2: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.1.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus cf2e19a95a gnu: r-scales: Update to 0.4.0. 
* gnu/packages/statistics.scm (r-scales): Update to 0.4.0.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus 9ee6d314c4 gnu: r-stringi: Update to 1.0-1. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.0-1.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus a99bed8cf3 gnu: r-munsell: Update to 0.4.3. 
* gnu/packages/statistics.scm (r-munsell): Update to 0.4.3.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus fe2087ccd8 gnu: r-digest: Update to 0.6.9. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.9.
[arguments]: Disable tests and vignettes.
 2016-04-26 17:06:17 +02:00
Ricardo Wurmus bae7953852 gnu: Add r-hexbin. 
* gnu/packages/statistics.scm (r-hexbin): New variable.
 2016-04-26 17:06:17 +02:00