Ricardo Wurmus
|
82d9340b0c
|
gnu: r-impute: Update to 1.58.0.
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.58.0.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
|
2019-05-06 00:14:44 +02:00 |
|
Ricardo Wurmus
|
2b4ac1d77e
|
gnu: r-rcas: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.10.0.
[propagated-inputs]: Add ghc-pandoc.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
8322c860f9
|
gnu: r-methylkit: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.10.0.
[propagated-inputs]: Add r-mgcv.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
b173dbe617
|
gnu: r-annotationhub: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.0.
[propagated-inputs]: Add r-biocfilecache, r-dplyr, and r-rappdirs.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
a8abc8dd3a
|
gnu: r-fastseg: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.30.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
e699e8e599
|
gnu: r-keggrest: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.24.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
c798455d87
|
gnu: r-gage: Update to 2.34.0.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.34.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
d4ef1d59cc
|
gnu: r-genomicfiles: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.20.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
70a3e4499d
|
gnu: r-complexheatmap: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.0.0.
[propagated-inputs]: Add r-clue and r-png.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
e2cb23404c
|
gnu: r-dirichletmultinomial: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.26.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
0af6efa3c5
|
gnu: r-ensembldb: Update to 2.8.0.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.8.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
96f98c5b72
|
gnu: r-organismdbi: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.26.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
a98c3b4ae4
|
gnu: r-biovizbase: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.32.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
d38fbacad1
|
gnu: r-ggbio: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.32.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
623be1a443
|
gnu: r-gqtlbase: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.16.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
ed7de45655
|
gnu: r-snpstats: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.34.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
3c5f5b4154
|
gnu: r-erma: Update to 1.0.0.
* gnu/packages/bioinformatics.scm (r-erma): Update to 1.0.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
89ba9a7226
|
gnu: r-ldblock: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.14.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
a349d57a46
|
gnu: r-gqtlstats: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.16.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
105d9e2cb4
|
gnu: r-gviz: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.28.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
1b454f9f69
|
gnu: r-gwascat: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.16.0.
[propagated-inputs]: Remove r-annotationhub, r-ggbio, r-ggplot2, r-gqtlstats,
r-graph, r-gviz, r-snpstats, r-summarizedexperiment, and r-variantannotation.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
256609eb46
|
gnu: r-sushi: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.22.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
7705165882
|
gnu: r-fithic: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.10.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
e998a26e1d
|
gnu: r-hitc: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.28.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
65925573be
|
gnu: r-hdf5array: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
d5625b3a9e
|
gnu: r-rhdf5lib: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.6.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
583b4fd6e3
|
gnu: r-beachmat: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.0.0.
[inputs]: Remove hdf5 and zlib.
[propagated-inputs]: Rmeove r-hdf5array, r-rcpp, r-rhdf5, and r-rhdf5lib.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
029cefdd90
|
gnu: r-singlecellexperiment: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.6.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
70d04dc183
|
gnu: r-scater: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.0.
[propagated-inputs]: Add r-biocneighbors and r-biocsingular; remove r-plyr,
r-reshape2, and r-rhdf5lib.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
4540727a21
|
gnu: r-scran: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.0.
[propagated-inputs]: Add r-bh, r-biocsingular, and r-dqrng; remove r-rhdf5lib.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
f2a63d1588
|
gnu: r-delayedmatrixstats: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.6.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
fab5f7c8d9
|
gnu: r-interactivedisplaybase: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.22.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
975b72fa10
|
gnu: r-edaseq: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.18.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
b765fc4a4c
|
gnu: r-deseq: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.36.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
95f3a46630
|
gnu: r-aroma-light: Update to 3.14.0.
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.14.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
dd03589939
|
gnu: r-msnid: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.18.0.
|
2019-05-06 00:14:38 +02:00 |
|
Ricardo Wurmus
|
b65c264907
|
gnu: r-msnbase: Update to 2.10.0.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.10.0.
|
2019-05-06 00:14:38 +02:00 |
|
Ricardo Wurmus
|
ee386fcb1a
|
gnu: r-pcamethods: Update to 1.76.0.
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.76.0.
|
2019-05-06 00:14:38 +02:00 |
|
Ricardo Wurmus
|
f955afdabf
|
gnu: r-mzid: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.22.0.
|
2019-05-06 00:14:38 +02:00 |
|
Ricardo Wurmus
|
9421e6b610
|
gnu: r-vsn: Update to 3.52.0.
* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.52.0.
|
2019-05-06 00:14:38 +02:00 |
|
Ricardo Wurmus
|
15f240e317
|
gnu: r-affy: Update to 1.62.0.
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.62.0.
|
2019-05-06 00:14:38 +02:00 |
|
Ricardo Wurmus
|
fdbaa5c1e5
|
gnu: r-affyio: Update to 1.54.0.
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.54.0.
|
2019-05-06 00:14:38 +02:00 |
|
Ricardo Wurmus
|
5498cc46b3
|
gnu: r-mzr: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.18.0.
|
2019-05-06 00:14:37 +02:00 |
|
Ricardo Wurmus
|
24aabd8fd9
|
gnu: r-protgenerics: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.16.0.
|
2019-05-06 00:14:37 +02:00 |
|
Ricardo Wurmus
|
10cb9919fc
|
gnu: r-sva: Update to 3.32.0.
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.32.0.
|
2019-05-06 00:14:37 +02:00 |
|
Ricardo Wurmus
|
59bef6eaee
|
gnu: r-copywriter: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.16.0.
|
2019-05-06 00:14:37 +02:00 |
|
Ricardo Wurmus
|
70c44443c3
|
gnu: r-chipseq: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.34.0.
|
2019-05-06 00:14:37 +02:00 |
|
Ricardo Wurmus
|
dbb4aa4a34
|
gnu: r-annotationfilter: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.8.0.
|
2019-05-06 00:14:37 +02:00 |
|
Ricardo Wurmus
|
f6ecdafa11
|
gnu: r-rhdf5: Update to 2.28.0.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.28.0.
|
2019-05-06 00:14:37 +02:00 |
|
Ricardo Wurmus
|
c030eb50c5
|
gnu: r-tximport: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.0.
|
2019-05-06 00:14:36 +02:00 |
|
Ricardo Wurmus
|
5b65a85949
|
gnu: r-mutationalpatterns: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.10.0.
|
2019-05-06 00:14:36 +02:00 |
|
Ricardo Wurmus
|
45aeb4eb1d
|
gnu: r-bamsignals: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.16.0.
|
2019-05-06 00:14:36 +02:00 |
|
Ricardo Wurmus
|
23ce7f3b0b
|
gnu: r-rhtslib: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.1.
|
2019-05-06 00:14:36 +02:00 |
|
Ricardo Wurmus
|
c648e672b7
|
gnu: r-zlibbioc: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.30.0.
|
2019-05-06 00:14:36 +02:00 |
|
Ricardo Wurmus
|
3be113b706
|
gnu: r-motifrg: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.28.0.
|
2019-05-06 00:14:35 +02:00 |
|
Ricardo Wurmus
|
a7143246f8
|
gnu: r-seqlogo: Update to 1.50.0.
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.50.0.
|
2019-05-06 00:14:35 +02:00 |
|
Ricardo Wurmus
|
6ef47ac82e
|
gnu: r-genomation: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.16.0.
|
2019-05-06 00:14:35 +02:00 |
|
Ricardo Wurmus
|
d726689a70
|
gnu: r-seqpattern: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.16.0.
|
2019-05-06 00:14:35 +02:00 |
|
Ricardo Wurmus
|
651b62c697
|
gnu: r-bsgenome: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.52.0.
|
2019-05-06 00:14:35 +02:00 |
|
Ricardo Wurmus
|
971df3a784
|
gnu: r-topgo: Update to 2.36.0.
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.36.0.
|
2019-05-06 00:14:34 +02:00 |
|
Ricardo Wurmus
|
d31f8d1bd8
|
gnu: r-genomicfeatures: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.0.
|
2019-05-06 00:14:34 +02:00 |
|
Ricardo Wurmus
|
40d97367f0
|
gnu: r-rtracklayer: Update to 1.44.0.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.0.
|
2019-05-06 00:14:34 +02:00 |
|
Ricardo Wurmus
|
6ff6973502
|
gnu: r-genomicalignments: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.0.
|
2019-05-06 00:14:34 +02:00 |
|
Ricardo Wurmus
|
8671d1e9d6
|
gnu: r-summarizedexperiment: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.14.0.
|
2019-05-06 00:14:34 +02:00 |
|
Ricardo Wurmus
|
14561bb9e7
|
gnu: r-delayedarray: Update to 0.10.0.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.10.0.
[propagated-inputs]: Add r-matrix.
|
2019-05-06 00:14:34 +02:00 |
|
Ricardo Wurmus
|
d2e165496b
|
gnu: r-biostrings: Update to 2.52.0.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.52.0.
|
2019-05-06 00:14:33 +02:00 |
|
Ricardo Wurmus
|
e10b67c797
|
gnu: r-biocparallel: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.0.
|
2019-05-06 00:14:33 +02:00 |
|
Ricardo Wurmus
|
933571ddcd
|
gnu: r-biomart: Update to 2.40.0.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.0.
|
2019-05-06 00:14:33 +02:00 |
|
Ricardo Wurmus
|
a1b9378a8e
|
gnu: r-annotationdbi: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.46.0.
|
2019-05-06 00:14:33 +02:00 |
|
Ricardo Wurmus
|
4aadfcd296
|
gnu: r-biobase: Update to 2.44.0.
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.44.0.
|
2019-05-06 00:14:33 +02:00 |
|
Ricardo Wurmus
|
b35bc56a8a
|
gnu: r-genomicranges: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.0.
|
2019-05-06 00:14:33 +02:00 |
|
Ricardo Wurmus
|
bc0e5bc12e
|
gnu: r-xvector: Update to 0.24.0.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.24.0.
|
2019-05-06 00:14:32 +02:00 |
|
Ricardo Wurmus
|
5fadf39280
|
gnu: r-limma: Update to 3.40.0.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.40.0.
|
2019-05-06 00:14:32 +02:00 |
|
Ricardo Wurmus
|
0d094ad9ab
|
gnu: r-variantannotation: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.0.
[propagated-inputs]: Add r-rhtslib.
|
2019-05-06 00:14:32 +02:00 |
|
Ricardo Wurmus
|
1e3f53a489
|
gnu: r-edger: Update to 3.26.0.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.0.
|
2019-05-06 00:14:32 +02:00 |
|
Ricardo Wurmus
|
6dc05d0a86
|
gnu: r-genomeinfodb: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.20.0.
|
2019-05-06 00:14:32 +02:00 |
|
Ricardo Wurmus
|
38142114b7
|
gnu: r-iranges: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.0.
|
2019-05-06 00:14:32 +02:00 |
|
Ricardo Wurmus
|
192ddab3e5
|
gnu: r-s4vectors: Update to 0.22.0.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.22.0.
|
2019-05-06 00:14:31 +02:00 |
|
Ricardo Wurmus
|
8bdf7d55be
|
gnu: r-bioccheck: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.20.0.
|
2019-05-06 00:14:31 +02:00 |
|
Ricardo Wurmus
|
e01b72d225
|
gnu: r-biocstyle: Update to 2.12.0.
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.12.0.
|
2019-05-06 00:14:31 +02:00 |
|
Ricardo Wurmus
|
440af6482a
|
gnu: r-biocviews: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.52.0.
|
2019-05-06 00:14:31 +02:00 |
|
Ricardo Wurmus
|
ce52cab000
|
gnu: r-grohmm: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.18.0.
|
2019-05-06 00:14:31 +02:00 |
|
Ricardo Wurmus
|
49f30903f0
|
gnu: r-shortread: Update to 1.42.0.
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.42.0.
|
2019-05-06 00:14:31 +02:00 |
|
Ricardo Wurmus
|
fe40f55094
|
gnu: r-gostats: Update to 2.50.0.
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.50.0.
|
2019-05-06 00:14:30 +02:00 |
|
Ricardo Wurmus
|
4d88dbe6eb
|
gnu: r-category: Update to 2.50.0.
* gnu/packages/bioinformatics.scm (r-category): Update to 2.50.0.
|
2019-05-06 00:14:30 +02:00 |
|
Ricardo Wurmus
|
08d2a26d47
|
gnu: r-gseabase: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.46.0.
|
2019-05-06 00:14:30 +02:00 |
|
Ricardo Wurmus
|
aa51a241c5
|
gnu: r-rbgl: Update to 1.60.0.
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.60.0.
[propagated-inputs]: Add r-bh.
|
2019-05-06 00:14:30 +02:00 |
|
Ricardo Wurmus
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7f737246d8
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gnu: r-annotationforge: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.26.0.
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2019-05-06 00:14:30 +02:00 |
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Ricardo Wurmus
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0a58282de7
|
gnu: r-dexseq: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.30.0.
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2019-05-06 00:14:30 +02:00 |
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Ricardo Wurmus
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9a39193d45
|
gnu: r-deseq2: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.24.0.
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2019-05-06 00:14:30 +02:00 |
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Ricardo Wurmus
|
0183163d1e
|
gnu: r-genefilter: Update to 1.66.0.
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.66.0.
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2019-05-06 00:14:29 +02:00 |
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Ricardo Wurmus
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3153ca9d5f
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gnu: r-rhtslib: Fix build.
* gnu/packages/bioinformatics.scm (r-rhtslib)[arguments]: Add
"--no-staged-install" to configure flags.
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2019-04-27 22:45:02 +02:00 |
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Ricardo Wurmus
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fc3ebc3023
|
gnu: r-ggbio: Fix build.
* gnu/packages/bioinformatics.scm (r-ggbio)[arguments]: Add build phase to
patch out typo.
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2019-04-27 20:45:21 +02:00 |
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Ricardo Wurmus
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7f55904558
|
gnu: Add umi-tools.
* gnu/packages/bioinformatics.scm (umi-tools): New variable.
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2019-04-26 21:00:37 +02:00 |
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Ricardo Wurmus
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296da6e624
|
gnu: r-seurat: Update to 3.0.0.
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.0.0.
[propagated-inputs]: Remove r-dosnow, r-dplyr, r-dtw, r-foreach, r-fpc,
r-gplots, r-hdf5r, r-hmisc, r-httr, r-lars, r-mixtools, r-reshape2, and
r-tidyr; add r-future, r-future-apply, r-ggrepel, r-kernsmooth, r-rlang,
r-rsvd, r-scales, and r-sctransform.
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2019-04-19 15:38:47 +02:00 |
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Ricardo Wurmus
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c4a50a8a47
|
gnu: r-genomicfeatures: Update to 1.34.8.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.8.
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2019-04-11 23:37:19 +02:00 |
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Ricardo Wurmus
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c2f6f4e500
|
gnu: Add python2-checkm-genome.
* gnu/packages/bioinformatics.scm (python2-checkm-genome): New variable.
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2019-04-11 17:54:57 +02:00 |
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Ricardo Wurmus
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36f4f1e297
|
gnu: Add pplacer.
* gnu/packages/bioinformatics.scm (pplacer, pplacer-scripts): New variables.
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2019-04-11 17:18:08 +02:00 |
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Ricardo Wurmus
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f613f9ae26
|
gnu: r-ldblock: Update to 1.12.1.
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.12.1.
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2019-04-06 23:13:26 +02:00 |
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Ricardo Wurmus
|
8f30d38238
|
gnu: r-ensembldb: Update to 2.6.8.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.8.
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2019-04-06 23:13:26 +02:00 |