880ed11e9f
gnu: r-msnbase: Update to 2.8.3.
...
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.8.3.
2019-01-12 23:35:17 +01:00
6451af78e1
gnu: r-mzid: Update to 1.20.1.
...
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.20.1.
2019-01-12 23:35:17 +01:00
a4f038dc97
gnu: r-mzr: Update to 2.16.1.
...
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.1.
2019-01-12 23:35:17 +01:00
46508c3a92
gnu: r-sva: Update to 3.30.1.
...
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.30.1.
2019-01-12 23:35:17 +01:00
c20426ec5c
gnu: r-methylkit: Update to 1.8.1.
...
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.8.1.
2019-01-12 23:35:17 +01:00
5c72ebafeb
gnu: r-copywriter: Update to 2.14.1.
...
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.14.1.
2019-01-12 23:35:17 +01:00
86162c767e
gnu: r-rhdf5: Update to 2.26.2.
...
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.26.2.
2019-01-12 23:35:17 +01:00
4c7b9222dd
gnu: r-tximport: Update to 1.10.1.
...
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.10.1.
2019-01-12 23:35:17 +01:00
4bfde52178
gnu: r-genomicalignments: Update to 1.18.1.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.18.1.
2019-01-12 23:35:17 +01:00
1fa12b2f06
gnu: r-biostrings: Update to 2.50.2.
...
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.50.2.
2019-01-12 23:35:17 +01:00
d4fc834cf7
gnu: r-biocparallel: Update to 1.16.5.
...
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.5.
2019-01-12 23:35:17 +01:00
52c977a05b
gnu: r-limma: Update to 3.38.3.
...
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.38.3.
2019-01-12 23:35:17 +01:00
3fd48846eb
gnu: r-variantannotation: Update to 1.28.8.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.8.
2019-01-12 23:35:17 +01:00
a619850930
gnu: r-edger: Update to 3.24.3.
...
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.24.3.
2019-01-12 23:35:17 +01:00
00f105fe20
gnu: r-biocviews: Update to 1.50.10.
...
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.50.10.
2019-01-12 23:35:16 +01:00
9c1b2b2ae0
gnu: r-systempiper: Update to 1.16.1.
...
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.16.1.
2019-01-12 23:35:16 +01:00
3b8c884285
gnu: r-rbgl: Update to 1.58.1.
...
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.58.1.
2019-01-12 23:35:16 +01:00
ffe16ef33c
gnu: r-dexseq: Update to 1.28.1.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.1.
2019-01-12 23:35:16 +01:00
f7e95c50b8
gnu: r-deseq2: Update to 1.22.2.
...
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.22.2.
2019-01-12 23:35:16 +01:00
feb561f721
gnu: r-scran: Update to 1.10.2.
...
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.10.2.
2019-01-12 23:35:16 +01:00
fd7301676e
gnu: r-sjplot: Update to 2.6.2.
...
* gnu/packages/cran.scm (r-sjplot): Update to 2.6.2.
2019-01-12 23:35:16 +01:00
e45f4a4dab
gnu: r-sjmisc: Update to 2.7.7.
...
* gnu/packages/cran.scm (r-sjmisc): Update to 2.7.7.
2019-01-12 23:35:16 +01:00
5e8282a4a0
gnu: r-rmpi: Update to 0.6-9.
...
* gnu/packages/cran.scm (r-rmpi): Update to 0.6-9.
2019-01-12 23:35:16 +01:00
80c4e75b87
gnu: r-seqminer: Update to 7.1.
...
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 7.1.
2019-01-12 23:35:16 +01:00
3bc0667f3c
gnu: r-bookdown: Update to 0.9.
...
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.9.
2019-01-12 23:35:16 +01:00
c3e5b456be
gnu: r-protviz: Update to 0.4.0.
...
* gnu/packages/cran.scm (r-protviz): Update to 0.4.0.
2019-01-12 23:35:16 +01:00
209e504bb1
gnu: r-ontologyindex: Update to 2.5.
...
* gnu/packages/cran.scm (r-ontologyindex): Update to 2.5.
2019-01-12 23:35:16 +01:00
e041740289
gnu: r-chemometricswithr: Update to 0.1.13.
...
* gnu/packages/cran.scm (r-chemometricswithr): Update to 0.1.13.
2019-01-12 23:35:16 +01:00
9ad5f4ba19
gnu: r-grimport: Update to 0.9-1.1.
...
* gnu/packages/cran.scm (r-grimport): Update to 0.9-1.1.
2019-01-12 23:35:16 +01:00
16d296bbd1
gnu: r-shades: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-shades): Update to 1.3.1.
2019-01-12 23:35:15 +01:00
6eab52e0dd
gnu: r-ggeffects: Update to 0.8.0.
...
* gnu/packages/cran.scm (r-ggeffects): Update to 0.8.0.
2019-01-12 23:35:15 +01:00
de7631b278
gnu: r-slam: Update to 0.1-44.
...
* gnu/packages/cran.scm (r-slam): Update to 0.1-44.
2019-01-12 23:35:15 +01:00
2652e2534f
gnu: r-refgenome: Update to 1.7.3.1.
...
* gnu/packages/cran.scm (r-refgenome): Update to 1.7.3.1.
2019-01-12 23:35:15 +01:00
f0867a0e8b
gnu: r-findpython: Update to 1.0.4.
...
* gnu/packages/cran.scm (r-findpython): Update to 1.0.4.
2019-01-12 23:35:15 +01:00
12502bf4e8
gnu: r-prediction: Update to 0.3.6.1.
...
* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.1.
2019-01-12 23:35:15 +01:00
fbd263cd4a
gnu: r-abn: Update to 1.3.
...
* gnu/packages/cran.scm (r-abn): Update to 1.3.
2019-01-12 23:35:15 +01:00
1b1444012b
gnu: r-sjstats: Update to 0.17.3.
...
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.3.
2019-01-12 23:35:15 +01:00
9df469a1d4
gnu: r-emmeans: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.1.
2019-01-12 23:35:15 +01:00
1afe56444e
gnu: r-glmmtmb: Update to 0.2.3.
...
* gnu/packages/cran.scm (r-glmmtmb): Update to 0.2.3.
2019-01-12 23:35:15 +01:00
1417d5f1d5
gnu: r-rio: Update to 0.5.16.
...
* gnu/packages/cran.scm (r-rio): Update to 0.5.16.
2019-01-12 23:35:15 +01:00
962304c31c
gnu: r-arules: Update to 1.6-2.
...
* gnu/packages/cran.scm (r-arules): Update to 1.6-2.
2019-01-12 23:35:15 +01:00
f2fc34f241
gnu: r-fnn: Update to 1.1.2.2.
...
* gnu/packages/cran.scm (r-fnn): Update to 1.1.2.2.
2019-01-12 23:35:15 +01:00
f0fe1a5a45
gnu: r-shinyace: Update to 0.3.3.
...
* gnu/packages/cran.scm (r-shinyace): Update to 0.3.3.
2019-01-12 23:35:15 +01:00
5f1f11049f
gnu: r-cubature: Update to 2.0.3.
...
* gnu/packages/cran.scm (r-cubature): Update to 2.0.3.
2019-01-12 23:35:15 +01:00
7abb15f2bb
gnu: r-tseries: Update to 0.10-46.
...
* gnu/packages/cran.scm (r-tseries): Update to 0.10-46.
2019-01-12 23:35:15 +01:00
9d83132757
gnu: r-statnet-common: Update to 4.2.0.
...
* gnu/packages/cran.scm (r-statnet-common): Update to 4.2.0.
2019-01-12 23:35:14 +01:00
7e9e9c9c46
gnu: r-tinytex: Update to 0.10.
...
* gnu/packages/cran.scm (r-tinytex): Update to 0.10.
2019-01-12 23:35:14 +01:00
fc00a1f0fc
gnu: r-pillar: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-pillar): Update to 1.3.1.
2019-01-12 23:35:14 +01:00
111516f9d6
gnu: r-gclus: Update to 1.3.2.
...
* gnu/packages/cran.scm (r-gclus): Update to 1.3.2.
2019-01-12 23:35:14 +01:00
ed46a05c75
gnu: r-laeken: Update to 0.5.0.
...
* gnu/packages/cran.scm (r-laeken): Update to 0.5.0.
2019-01-12 23:35:14 +01:00
fc74de42da
gnu: r-ddalpha: Update to 1.3.8.
...
* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.8.
2019-01-12 23:35:14 +01:00
221b3b164d
gnu: r-rmysql: Update to 0.10.16.
...
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.16.
2019-01-12 23:35:14 +01:00
1c6d199ee8
gnu: r-mitml: Update to 0.3-7.
...
* gnu/packages/cran.scm (r-mitml): Update to 0.3-7.
2019-01-12 23:35:14 +01:00
5703991841
gnu: r-recipes: Add missing input.
...
* gnu/packages/cran.scm (r-recipes)[propagated-inputs]: Add r-withr.
2019-01-12 23:35:14 +01:00
77f97229c9
gnu: r-dimred: Add missing input.
...
* gnu/packages/cran.scm (r-dimred)[propagated-inputs]: Add r-magrittr.
2019-01-12 23:35:14 +01:00
8f88701491
gnu: r-lava: Update to 1.6.4.
...
* gnu/packages/cran.scm (r-lava): Update to 1.6.4.
2019-01-12 23:35:14 +01:00
397dba01c6
gnu: r-powerlaw: Update to 0.70.2.
...
* gnu/packages/cran.scm (r-powerlaw): Update to 0.70.2.
2019-01-12 23:35:14 +01:00
72c4987506
gnu: r-circlize: Update to 0.4.5.
...
* gnu/packages/cran.scm (r-circlize): Update to 0.4.5.
2019-01-12 23:35:14 +01:00
422dea1774
gnu: r-ps: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-ps): Update to 1.3.0.
2019-01-12 23:35:14 +01:00
dcf89cc0cf
gnu: r-haven: Update to 2.0.0.
...
* gnu/packages/cran.scm (r-haven): Update to 2.0.0.
2019-01-12 23:35:14 +01:00
69aad34ae0
gnu: r-feather: Update to 0.3.2.
...
* gnu/packages/cran.scm (r-feather): Update to 0.3.2.
2019-01-12 23:35:13 +01:00
1add168ab5
gnu: r-htmltable: Update to 1.13.1.
...
* gnu/packages/cran.scm (r-htmltable): Update to 1.13.1.
2019-01-12 23:35:13 +01:00
37349c717e
gnu: r-httpuv: Update to 1.4.5.1.
...
* gnu/packages/cran.scm (r-httpuv): Update to 1.4.5.1.
2019-01-12 23:35:13 +01:00
0c025a7f79
gnu: r-clipr: Update to 0.5.0.
...
* gnu/packages/cran.scm (r-clipr): Update to 0.5.0.
2019-01-12 23:35:13 +01:00
2e4fc4ac62
gnu: r-caret: Update to 6.0-81.
...
* gnu/packages/statistics.scm (r-caret): Update to 6.0-81.
2019-01-12 23:35:13 +01:00
aa72d7f7f5
gnu: r-quantreg: Update to 5.38.
...
* gnu/packages/statistics.scm (r-quantreg): Update to 5.38.
2019-01-12 23:35:13 +01:00
9b7df80b9b
gnu: r-rcppeigen: Update to 0.3.3.5.0.
...
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.5.0.
2019-01-12 23:35:13 +01:00
bcc17f7f11
gnu: r-rrcov: Update to 1.4-7.
...
* gnu/packages/statistics.scm (r-rrcov): Update to 1.4-7.
2019-01-12 23:35:13 +01:00
70ee5ab137
gnu: r-cowplot: Update to 0.9.4.
...
* gnu/packages/statistics.scm (r-cowplot): Update to 0.9.4.
2019-01-12 23:35:13 +01:00
7213ef07c6
gnu: r-rann: Update to 2.6.1.
...
* gnu/packages/statistics.scm (r-rann): Update to 2.6.1.
2019-01-12 23:35:13 +01:00
2c8594d963
gnu: r-sfsmisc: Update to 1.1-3.
...
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-3.
2019-01-12 23:35:13 +01:00
54ebdf6f74
gnu: r-rmarkdown: Update to 1.11.
...
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.11.
[propagated-inputs]: Remove r-rprojroot.
2019-01-12 23:35:13 +01:00
fb45934202
gnu: r-rstudioapi: Update to 0.9.0.
...
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.9.0.
2019-01-12 23:35:13 +01:00
8f49d99a84
gnu: r-git2r: Update to 0.24.0.
...
* gnu/packages/statistics.scm (r-git2r): Update to 0.24.0.
2019-01-12 23:35:13 +01:00
c12e429348
gnu: r-httr: Update to 1.4.0.
...
* gnu/packages/statistics.scm (r-httr): Update to 1.4.0.
2019-01-12 23:35:13 +01:00
02c89c5812
gnu: r-commonmark: Update to 1.7.
...
* gnu/packages/statistics.scm (r-commonmark): Update to 1.7.
2019-01-12 23:35:12 +01:00
fe8c44502b
gnu: r-checkmate: Update to 1.9.0.
...
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.0.
2019-01-12 23:35:12 +01:00
ca4861c602
gnu: r-backports: Update to 1.1.3.
...
* gnu/packages/statistics.scm (r-backports): Update to 1.1.3.
2019-01-12 23:35:12 +01:00
23347dc353
gnu: r-dbplyr: Update to 1.3.0.
...
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.3.0.
2019-01-12 23:35:12 +01:00
f12ed3664d
gnu: r-tibble: Update to 2.0.0.
...
* gnu/packages/statistics.scm (r-tibble): Update to 2.0.0.
[propagated-inputs]: Add r-fansi and r-pkgconfig.
2019-01-12 23:35:12 +01:00
c668a95861
gnu: r-rlang: Update to 0.3.1.
...
* gnu/packages/statistics.scm (r-rlang): Update to 0.3.1.
2019-01-12 23:35:12 +01:00
495866a9d7
gnu: r-knitr: Update to 1.21.
...
* gnu/packages/statistics.scm (r-knitr): Update to 1.21.
[propagated-inputs]: Add r-xfun.
2019-01-12 23:35:12 +01:00
bf3aded0cf
gnu: r-markdown: Update to 0.9.
...
* gnu/packages/statistics.scm (r-markdown): Update to 0.9.
2019-01-12 23:35:12 +01:00
eae93bd3f2
gnu: r-bh: Update to 1.69.0-1.
...
* gnu/packages/statistics.scm (r-bh): Update to 1.69.0-1.
2019-01-12 23:35:12 +01:00
b6e27673e6
gnu: r-pheatmap: Update to 1.0.12.
...
* gnu/packages/statistics.scm (r-pheatmap): Update to 1.0.12.
2019-01-12 23:35:12 +01:00
ca2bc7e037
gnu: r-mgcv: Update to 1.8-26.
...
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-26.
2019-01-12 23:35:12 +01:00
60f1bce09f
gnu: r-codetools: Update to 0.2-16.
...
* gnu/packages/statistics.scm (r-codetools): Update to 0.2-16.
2019-01-12 23:35:12 +01:00
3dbd87f504
gnu: r-class: Update to 7.3-15.
...
* gnu/packages/statistics.scm (r-class): Update to 7.3-15.
2019-01-12 23:35:12 +01:00
35cf4874cc
gnu: r-survival: Update to 2.43-3.
...
* gnu/packages/statistics.scm (r-survival): Update to 2.43-3.
2019-01-12 23:35:12 +01:00
11a36548d9
gnu: r-argparse: Update to 2.0.0.
...
* gnu/packages/cran.scm (r-argparse): Update to 2.0.0.
[propagated-inputs]: Add r-r6; remove r-proto.
2019-01-12 23:35:12 +01:00
527c605598
gnu: r-callr: Update to 3.1.1.
...
* gnu/packages/cran.scm (r-callr): Update to 3.1.1.
[propagated-inputs]: Remove r-base64enc.
2019-01-12 23:35:12 +01:00
b140569e18
gnu: r-readxl: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-readxl): Update to 1.2.0.
[propagated-inputs]: Add r-progress.
2019-01-12 23:35:11 +01:00
0aad198e2b
gnu: r-pracma: Update to 2.2.2.
...
* gnu/packages/maths.scm (r-pracma): Update to 2.2.2.
2019-01-12 23:35:11 +01:00
44c69a536e
gnu: r-rcpparmadillo: Update to 0.9.200.5.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.5.0.
2019-01-12 23:35:11 +01:00
0e87bf0177
gnu: r-processx: Update to 3.2.1.
...
* gnu/packages/cran.scm (r-processx): Update to 3.2.1.
[propagated-inputs]: Remove r-assertthat, r-crayon, and r-testthat.
2019-01-12 23:35:11 +01:00
2766d3436a
gnu: r-sjlabelled: Update to 1.0.16.
...
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.0.16.
[propagated-inputs]: Remove r-tibble and r-tidyselect.
2019-01-12 23:35:11 +01:00
813d9c51e3
gnu: r-broom: Update to 0.5.1.
...
* gnu/packages/cran.scm (r-broom): Update to 0.5.1.
[propagated-inputs]: Add r-generics.
2019-01-12 23:35:11 +01:00
25c67ecfc6
gnu: Add r-generics.
...
* gnu/packages/cran.scm (r-generics): New variable.
2019-01-12 23:35:11 +01:00
646e1ef059
gnu: r-curl: Update to 3.3.
...
* gnu/packages/cran.scm (r-curl): Update to 3.3.
[inputs]: Add zlib.
[native-inputs]: Add pkg-config.
2019-01-12 23:35:11 +01:00
ef91530362
gnu: r-readr: Update to 1.3.1.
...
* gnu/packages/statistics.scm (r-readr): Update to 1.3.1.
[propagated-inputs]: Add r-clipr and r-crayon.
2019-01-12 23:35:11 +01:00
48102ce123
gnu: r-mvabund: Update to 4.0.1.
...
* gnu/packages/cran.scm (r-mvabund): Update to 4.0.1.
2019-01-12 23:35:11 +01:00
04a18a81ae
gnu: r-writexl: Update to 1.1.
...
* gnu/packages/cran.scm (r-writexl): Update to 1.1.
2019-01-12 23:35:11 +01:00
a2315c6702
gnu: r-jsonlite: Update to 1.6.
...
* gnu/packages/cran.scm (r-jsonlite): Update to 1.6.
2019-01-12 23:35:11 +01:00
ea600ff709
gnu: python-pillow: Update homepage.
...
* gnu/packages/python.scm (python-pillow)[homepage]: Update URL.
2019-01-12 16:39:26 -05:00
acbf312573
gnu: python-pillow: Update to 5.4.0
...
* gnu/packages/python.scm (python-pillow): Update to 5.4.0.
[arguments]: Add 'patch-ldconfig' phase.
2019-01-12 16:38:36 -05:00
146c6b62bf
gnu: Sort package modules in (gnu packages guile).
...
* gnu/packages/guile.scm: Sort list of gnu/packages modules.
2019-01-12 12:14:31 +01:00
7d8baff97b
gnu: impressive: Update to 0.12.0.
...
* gnu/packages/pdf.scm (impressive): Update to 0.12.0.
2019-01-12 12:14:31 +01:00
24155bf40d
gnu: Move Java compression packages to new module.
...
* gnu/packages/compression.scm (bitshuffle-for-snappy): Export variable.
(java-snappy, java-snappy-1, java-iq80-snappy, java-jbzip2, java-tukaani-xz):
Move these variables from here...
* gnu/packages/java-compression.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/java.scm, gnu/packages/bioinformatics.scm: Adjust module
references.
2019-01-12 12:14:28 +01:00
1704367719
gnu: Add Bochs.
...
* gnu/packages/virtualization.scm (bochs): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-01-11 17:09:20 -05:00
81c64748ba
gnu: Stellarium: Update to 0.18.3.
...
* gnu/packages/astronomy.scm (stellarium): Update to 0.18.3.
[arguments]: Skip a broken test.
2019-01-11 17:07:55 -05:00
1ac0c1b899
gnu: opendht: Make argon2 a propagated input so that its .pc is found.
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* gnu/packages/networking.scm (opendht)[inputs]: Remove argon2.
[propagated-inputs]: Add it here.
2019-01-11 19:48:00 +01:00
e0fa641380
gnu: opendht: Use jsoncpp and restbed.
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* gnu/packages/crypto.scm (opendht): Move definition to networking.scm.
* gnu/packages/networking.scm (opendht)[inputs]: Add jsoncpp and restbed.
2019-01-11 19:48:00 +01:00
362fba83dd
gnu: Add restbed.
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* gnu/packages/networking.scm (restbed): New variable.
2019-01-11 19:48:00 +01:00
50e1843b3a
gnu: libupnp: Update to 1.6.25.
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* gnu/packages/upnp.scm (libupnp): Update to 1.6.25.
2019-01-11 19:48:00 +01:00
46b082f97f
gnu: kinit: Use KDEINIT5_LIBRARY_PATH to search for dynlibs.
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Using LIBRARY_PATH was introduced in
16b8aff85b
2019-01-11 16:35:52 +01:00
5a26f879c3
Revert "gnu: emacs-ghub: Update to 3.2.0."
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This change should be applied once we update our magit package.
This reverts commit b96f0e6ff9
2019-01-11 13:32:31 +01:00
88d7101798
gnu: Add emacs-general.
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[[PGP Signed Part:Good signature from 31BC8105F659D425 Gabriel Hondet <gabrielhondet@gmail.com> (trust undefined) created at 2019-01-06T10:42:43+0100 using RSA]]
* gnu/packages/emacs.scm (emacs-general): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-11 12:14:38 +01:00
84a2de36a1
services: Deprecate a few more service procedures.
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These procedures were already either undocumented (and de facto
deprecated) or documented as deprecated or redundant.
* gnu/services/base.scm (guix-service, guix-publish-service): Mark as
deprecated.
* gnu/services/mcron.scm (mcron-service): Likewise.
* gnu/services/networking.scm (tor-service): Likewise.
* doc/guix.texi (Scheduled Job Execution): Remove 'mcron-service' and
adjust example.
(Networking Services): Remove 'tor-service'.
* gnu/tests/base.scm (%mcron-os): Use 'mcron-service-type' instead of
'mcron-service'.
* gnu/tests/networking.scm (%tor-os): Use 'tor-service-type' instead of
'tor-service'.
* tests/guix-system.sh: Likewise.
2019-01-11 12:14:38 +01:00
babfd9447d
tests: Nitpick on Docker test.
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This is a followup to 7d8a4eeacc
2019-01-11 12:14:37 +01:00
cb2ad4f508
gnu: wine-staging: Hard-code vulkan loader.
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* gnu/packages/wine.scm (wine-staging-patchset-data): Fix indentation.
* gnu/packages/wine.scm (wine-staging)[arguments]: Add 'wrap-executable phase.
* gnu/packages/wine.scm (wine64-staging)[arguments]: Add 'wrap-executable
phase. Copy the real wine-preloader instead of the wrapped version.
2019-01-11 11:15:13 +01:00
e7c6bc45ed
gnu: jamm: Remove broken "build" phase.
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* gnu/packages/bioinformatics.scm (jamm)[arguments]: Remove "build" phase.
2019-01-11 06:08:43 +01:00
9757b57f4e
services: docker: Update comment.
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* gnu/services/docker.scm (docker-shepherd-service): Update comment.
2019-01-11 02:53:28 +01:00
adf0b482eb
gnu: gexiv2: Update to 0.10.10.
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* gnu/packages/gnome.scm (gexiv2): Update to 0.10.10.
2019-01-10 18:45:41 -05:00
d4d9a1ece0
gnu: Update texlive packages.
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* guix/build-system/texlive.scm (%texlive-tag, %texlive-revision): Update to
texlive-2018.2, revision 49435.
* gnu/packages/tex.scm (texlive-dvips, texlive-generic-unicode-data,
texlive-generic-dehyph-exptl, texlive-generic-hyph-utf8, texlive-fontname,
texlive-fonts-cm, texlive-tex-plain, texlive-latex-base,
texlive-latex-graphics, texlive-latex-graphics, texlive-latex-oberdiek,
texlive-latex-tools, texlive-latex-l3kernel, texlive-latex-l3packages,
texlive-latex-fontspec, texlive-latex-amsmath, texlive-latex-amscls,
texlive-latex-babel, texlive-latex-cyrillic, texlive-latex-eqparbox,
texlive-latex-ifplatform, texlive-latex-etoolbox, texlive-latex-galois,
texlive-latex-polyglossia, texlive-tex-texinfo, texlive-latex-changebar,
texlive-latex-fancyhdr, texlive-latex-overpic, texlive-latex-parskip,
texlive-metapost, texlive-latex-ucs, texlive-generic-pdftex,
texlive-latex-media9, texlive-latex-ocgx2, texlive-latex-koma-script,
texlive-generic-listofitems, texlive-bibtex, texlive-context-base): Update
hashes.
(texlive-latex-fontspec)[arguments]: Remove custom build target.
(texlive-latex-dinbrief)[arguments]: Add build phase "fix-encoding-error".
(texlive-latex-xkeyval): New variable.
(texlive-latex-pstool)[source]: Fetch from new location.
[build-system]: Use trivial-build-system.
[arguments]: Write simple builder.
[propagated-inputs]: Add texlive-latex-l3kernel, texlive-latex-tools, and
texlive-latex-xkeyval.
[synopsis]: Fix typo.
2019-01-10 22:43:09 +01:00
c954fe6622
gnu: irssi: Update to 1.1.2 [fixes CVE-2019-5882].
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* gnu/packages/irc.scm (irssi): Update to 1.1.2.
2019-01-10 16:05:42 -05:00
ffcd282702
gnu: docker: Booby-trap "Command" and "LookPath" calls.
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* gnu/packages/docker.scm (docker)[arguments]<#:phases>[patch-paths]:
Booby-trap "Command" and "LookPath" calls.
2019-01-10 21:29:53 +01:00
6a6e5d84da
gnu: opendht: Update to 1.8.1.
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* gnu/packages/crypto.scm (opendht): Update to 1.8.1.
[source]: Remove snippet that deletes argon2, which is no longer bundled.
[arguments]: Add "--with-argon2" to use system argon2.
[license]: Update to GPLv3+ following the README and source headers.
2019-01-10 21:09:06 +01:00
6fe6840dab
gnu: Add libsecp256k1.
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* gnu/packages/crypto.scm (libsecp256k1): New variable.
2019-01-10 21:09:06 +01:00
35ac66eec1
gnu: crypto++: Update to 8.0.0.
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* gnu/packages/crypto.scm (crypto++): Update to 8.0.0.
[arguments]: Build shared library.
[arguments]: Generate .pc file.
2019-01-10 21:09:06 +01:00
8b0c174415
services: docker: Use more minimal service requrements.
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* gnu/services/docker.scm (docker-service-type)[requirement]: Add
file-system-/sys/fs/cgroup/blkio, file-system-/sys/fs/cgroup/cpu,
file-system-/sys/fs/cgroup/cpuset, file-system-/sys/fs/cgroup/devices,
file-system-/sys/fs/cgroup/memory. Remove elogind.
2019-01-10 19:17:49 +01:00
d3a0e74d6a
services: docker: Clarify service-extension shepherd-root-service-type.
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* gnu/services/docker.scm (docker-service-type)[extensions]: Clarify
service-extension shepherd-root-service-type.
2019-01-10 19:17:48 +01:00
dbd346ae88
gnu: sct: Correct license.
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* gnu/packages/xdisorg.scm (sct)[license]: Change to non-copyleft.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-10 14:59:23 +01:00
65a67bf711
services: Use 'define-deprecated' for service procedures.
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* gnu/services/base.scm (urandom-seed-service, gpm-service): Define
using 'define-deprecated'.
* gnu/services/messaging.scm (bitlbee-service): Likewise.
* gnu/services/networking.scm (dhcp-client-service): Likewise.
(ntp-service): Likewise.
* gnu/services/xorg.scm (slim-service): Likewise.
(gdm-service): Likewise.
2019-01-10 14:59:23 +01:00
7d4b3e1e2b
gnu: Add pwsafe
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* gnu/packages/password-utils.scm (pwsafe): New variable
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-10 14:59:22 +01:00
01b3625df6
services: gdm: Add default value.
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* gnu/services/xorg.scm (<gdm-configuration>)[x-server]: Add default
value.
(gdm-service-type)[default-value, description]: New fields.
(gdm-service): Mark as deprecated.
2019-01-10 14:59:22 +01:00
394207c1ee
gnu: Add missing copyright line.
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* gnu/packages/video.scm: Add missing copyright line for commit 20b4aa6
2019-01-10 08:59:44 +01:00
1d591432c7
gnu: wlstream: Fix indentation.
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* gnu/packages/video.scm (wlstream): Fix indentation.
2019-01-10 08:53:36 +01:00
20b4aa6bab
gnu: Add wlstream.
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* gnu/packages/video.scm (wlstream): New variable.
2019-01-10 08:41:03 +01:00
1f61cc102e
gnu: ffmpeg: Add libdrm support.
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* gnu/packages/video.scm (ffmpeg): Add libdrm support.
2019-01-10 08:20:39 +01:00
6b6a25d4d2
gnu: docker: Fix more paths.
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* gnu/packages/docker.scm (docker)[inputs]: Add dbus, git.
[arguments]<#:phases>[patch-paths]: Use them.
2019-01-10 05:40:53 +01:00
f946a370ed
services: docker: Depend on elogind.
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* gnu/services/docker.scm (docker-shepherd-service)[requirement]: Add elogind.
2019-01-10 05:15:42 +01:00
dc4b4a38fa
tests: docker: Fix test.
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* gnu/tests/docker.scm (run-docker-test): Set memory and disk size.
(%docker-os): Add elogind service.
2019-01-10 05:15:41 +01:00
60893e5c84
gnu: linux-libre: Update to 4.20.1.
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* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.1.
(%linux-libre-hash): Update hash.
2019-01-09 23:00:07 -05:00
f7ed0b1db5
gnu: linux-libre@4.19: Update to 4.19.14.
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* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.14.
(%linux-libre-4.19-hash): Update hash.
2019-01-09 23:00:05 -05:00
166c6ad39c
gnu: linux-libre@4.14: Update to 4.14.92.
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* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.92.
(%linux-libre-4.14-hash): Update hash.
2019-01-09 23:00:03 -05:00
c37f52e3be
gnu: linux-libre@4.9: Update to 4.9.149.
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* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.149.
2019-01-09 23:00:00 -05:00
28f6b27543
gnu: linux-libre: Enable pressure stall information.
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* gnu/packages/aux-files/linux-libre/4.20-arm.conf,
gnu/packages/aux-files/linux-libre/4.20-arm64.conf,
gnu/packages/aux-files/linux-libre/4.20-i686.conf,
gnu/packages/aux-files/linux-libre/4.20-x86_64.conf: Enable CONFIG_PSI.
2019-01-09 22:59:58 -05:00
8cd958608c
gnu: docker: Disable tests requiring elevated permissions.
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* gnu/packages/docker.scm (docker)[arguments]<#:phases>[delete-failing-tests]:
Disable tests requiring elevated permissions.
2019-01-10 04:46:29 +01:00
8b487bf84f
gnu: containerd: Fix more paths.
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* gnu/packages/docker.scm (containerd)[inputs]: Add util-linux.
[arguments]<#:phases>[patch-paths]: Fix more paths.
2019-01-10 04:34:57 +01:00
58adcaa19f
gnu: docker: Fix more paths.
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* gnu/packages/docker.scm (docker)[inputs]: Add util-linux.
[arguments]<#:phases>[patch-paths]: Fix more paths.
2019-01-10 04:33:47 +01:00
Ricardo Wurmus