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Author SHA1 Message Date
Tobias Geerinckx-Rice efd5a841e5
gnu: youtube-dl: Update to 2017.07.09. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.09.
 2017-07-09 15:58:35 +02:00
Marius Bakke ed40e7c5eb
gnu: libjpeg-turbo: Update to 1.5.2. 
* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.2.
[arguments]<#:phases>: Remove.
 2017-07-09 15:12:53 +02:00
Feng Shu e2155f58c0
gnu: you-get: Update to 0.4.775. 
* gnu/packages/video.scm (you-get): Update to 0.4.775.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
 2017-07-09 21:27:37 +10:00
Leo Famulari b3cc304b30
gnu: poppler: Use an ABI-compatible replacement to fix CVE-2017-9776. 
This is a followup to commit 95bbaa02aa.
See <https://bugs.gnu.org/27621> for more information.

Poppler 0.56.0's ABI is not compatible with Poppler 0.52.0, so it's not
possible to graft the newer version in place of the older one.

This change leaves CVE-2017-9775 unfixed for now.

* gnu/packages/patches/poppler-CVE-2017-9776.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler-0.56.0): Replace with ...
(poppler/fixed): ... new variable.
(poppler)[replacement]: Replaced with poppler/fixed.
 2017-07-09 02:25:27 -04:00
Tobias Geerinckx-Rice 447f75825f
gnu: sshuttle: Update to 0.78.3. 
* gnu/packages/vpn.scm (sshuttle): Update to 0.78.3.
 2017-07-09 01:59:25 +02:00
Kei Kebreau 5143517c99
gnu: wxmaxima: Update to 17.05.0. 
* gnu/packages/maths.scm (wxmaxima): Update to 17.05.0.
[source]: Update URL and add file-name.
[native-inputs]: Add autoconf, automake and gettext-minimal.
[arguments]: Add 'autoconf' phase.
 2017-07-08 17:05:55 -04:00
Efraim Flashner fac2b430b9
gnu: font-gnu-unifont: Update to 10.0.04. 
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.04.
 2017-07-08 23:49:29 +03:00
Ben Woodcroft 4732e6ee84
gnu: blast+: Update to 2.6.0. 
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.  Add patch.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
* gnu/packages/patches/blast+-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-07-08 12:05:59 +10:00
Kei Kebreau f2fa86cc82
gnu: maxima: Ensure gcc is available at runtime. 
* gnu/packages/maths.scm (maxima)[inputs]: Add gcc.
[arguments]: Use modify-phases syntax. Add 'set-gcc-path' phase.
 2017-07-07 20:47:28 -04:00
Leo Famulari 0ca1e77c14
gnu: perl-dbd-mysql: Update to 4.043. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.043.
 2017-07-07 20:34:52 -04:00
Marius Bakke d28f90bed9
gnu: python-pyopenssl: Fix test failure on 32-bit platforms. 
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pyopenssl)[source]: Use it.
 2017-07-07 18:43:16 +02:00
Leo Famulari 4909eadfad
gnu: irssi: Update to 1.0.4 [fixes CVE-2017-{10965,10966}]. 
* gnu/packages/irc.scm (irssi): Update to 1.0.4.
 2017-07-07 12:36:00 -04:00
Danny Milosavljevic acc0f6bb58
guix system: Add file system label and uuid to iso9660-image. 
* gnu/system/vm.scm (system-disk-image): Pass root-label to ...
(iso9660-image): ... here.  Add keyword arguments #:file-system-label
and #:file-system-uuid.
 2017-07-07 18:04:31 +02:00
Mark H Weaver 0b1e2ecb25
gnu: webkitgtk: Update to 2.16.5. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.16.5.
 2017-07-07 11:54:01 -04:00
Tobias Geerinckx-Rice 5826e7b11b
gnu: rdma-core: Update to 14. 
* gnu/packages/linux.scm (rdma-core): Update to 14.
 2017-07-07 15:24:14 +02:00
Tobias Geerinckx-Rice 5d3474c5a9
gnu: catimg: Update to 2.3.2. 
* gnu/packages/image-viewers.scm (catimg): Update to 2.3.2.
 2017-07-07 15:24:14 +02:00
Leo Famulari 642656a144
gnu: python-parsedatetime: Update to 2.4. 
* gnu/packages/python.scm (python-parsedatetime, python2-parsedatetime):
Update to 2.4.
 2017-07-07 01:23:12 -04:00
Leo Famulari 93013f1e79
gnu: python-icalendar: Update to 3.11.5. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.5.
 2017-07-07 01:23:08 -04:00
Alex Vong dab536fe1a
gnu: libtiff: Fix CVE-2017-{9936,10688}. 
* gnu/packages/patches/libtiff-CVE-2017-9936.patch,
gnu/packages/patches/libtiff-CVE-2017-10688.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-07 00:06:37 -04:00
Kei Kebreau ab104672e1
gnu: xorg-server: Fix CVE-2017-{10971,10972}. 
* gnu/packages/patches/xorg-server-CVE-2017-10971.patch,
gnu/packages/patches/xorg-server-CVE-2017-10972.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (xorg-server)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-06 23:52:22 -04:00
Alex Vong 96dcaa0ca9
gnu: youtube-dl: Update to 2017.07.02. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.02.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-07-07 01:50:27 +02:00
Leo Famulari 0a66c38764
Revert "gnu: blast+: Update to 2.6.0." 
This reverts commit 18dea67dc3.
 2017-07-06 19:38:55 -04:00
Ludovic Courtès 5dfbd76971
gnu: shadow: Correctly match the system type. 
* gnu/packages/admin.scm (shadow)[inputs]: Use 'string-contains' instead
of 'string-prefix?' when matching the system type.
 2017-07-07 00:44:55 +02:00
Mark H Weaver 879b89d1ae
gnu: linux-libre@4.9: Update to 4.9.36. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.36.
 2017-07-06 18:41:45 -04:00
Mark H Weaver 95f69e9cfc
gnu: linux-libre@4.4: Update to 4.4.76. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.76.
 2017-07-06 18:40:43 -04:00
Tobias Geerinckx-Rice 856f68786f
gnu: iproute: Update to 4.12.0. 
* gnu/packages/linux.scm (iproute): Update to 4.12.0.
 2017-07-06 15:57:16 +02:00
Rutger Helling d3f52500f3
gnu: xpra: Update to 2.0.3. 
* gnu/packages/xorg.scm (xpra): Update to 2.0.3.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-07-06 13:28:08 +05:30
Efraim Flashner 8c6acc3efe
gnu: freeipmi: Remove readline from inputs. 
This is a follow-up to 694b7c3180.

* gnu/packages/freeimpi.scm (freeipmi)[inputs]: Really remove readline.
 2017-07-06 09:45:52 +03:00
Efraim Flashner 694b7c3180
gnu: freeipmi: Update to 1.5.6. 
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.5.6.
[inputs]: Remove readline.
 2017-07-06 09:39:09 +03:00
Tobias Geerinckx-Rice 08094dc926
gnu: zstd: Update to 1.3.0. 
* gnu/packages/compression.scm (zstd): Update to 1.3.0.
 2017-07-06 01:28:05 +02:00
Tobias Geerinckx-Rice 6c69663400
gnu: libvirt: Update to 3.5.0. 
* gnu/packages/qemu.scm (libvirt): Update to 3.5.0.
 2017-07-06 01:28:05 +02:00
Tobias Geerinckx-Rice ab3cac3785
gnu: bash-completion: Update to 2.6. 
* gnu/packages/bash.scm (bash-completion): Update to 2.6.
 2017-07-06 01:28:05 +02:00
Marius Bakke a6a979cba3
gnu: mariadb: Update to 10.1.25. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.25.
 2017-07-06 00:15:14 +02:00
Marius Bakke 79937f72c3
gnu: strace: Update to 4.18. 
* gnu/packages/linux.scm (strace): Update to 4.18.
 2017-07-06 00:15:13 +02:00
Marius Bakke ece8bb3812
gnu: xscreensaver: Update to 5.37. 
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.37.
 2017-07-06 00:15:13 +02:00
Ludovic Courtès ad01c7aa14
gnu: artanis: Update source URL. 
* gnu/packages/guile.scm (artanis)[source]: Change URL to mirror://gnu.
 2017-07-06 00:02:41 +02:00
Efraim Flashner 298fd38b4b
gnu: julia: Add support for aarch64-linux. 
* gnu/packages/julia.scm (julia)[arguments]: Add make-flag argument for
aarch64-linux.
[supported-systems]: Add aarch64-linux.
 2017-07-05 20:26:46 +03:00
Efraim Flashner cdc827b3f3
gnu: gcompris: Update to 17.05. 
* gnu/packages/education.scm (gcompris): Update to 17.05.
 2017-07-05 12:40:40 +03:00
Efraim Flashner 0dd8791922
gnu: gcc@6: Update to 6.4.0. 
* gnu/packages/gcc.scm (gcc@6, gfortran@6): Update to 6.4.0.
 2017-07-05 08:31:46 +03:00
Leo Famulari 7550f8eaeb
gnu: net-tools: Remove `hostname` from description. 
This is a followup to commit c9e0a44eec.

* gnu/packages/linux.scm (net-tools)[description]: Update description.
 2017-07-05 00:35:37 -04:00
Leo Famulari e048de6098
gnu: inet-utils: Mention `hostname` in description. 
* gnu/packages/admin.scm (inetutils)[description]: Update description.
 2017-07-05 00:35:28 -04:00
Stefan Reichör 2d677f84f4
gnu: tmux: Update to 2.5. 
* gnu/packages/tmux.scm (tmux): Update to 2.5.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-07-05 00:24:02 +02:00
ng0 32f9cc3386
gnu: alpine: Use new URL. 
* gnu/packages/mail.scm (alpine)[source]: Use new URL for download.
(home-page): Use new URL.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-07-05 00:24:02 +02:00
Ludovic Courtès 425ab478ac
gnu: shepherd: Allow cross-compilation. 
* gnu/packages/admin.scm (shepherd)[native-inputs]: Add GUILE-2.0.
 2017-07-04 23:45:12 +02:00
Ludovic Courtès ba4aca3ae4
gnu: util-linux: Fix cross-compilation. 
* gnu/packages/linux.scm (util-linux)[inputs]: Add NET-BASE
when (%current-target-system) is true.  Fixes cross-compilation.
 2017-07-04 23:45:12 +02:00
Ludovic Courtès 6d9a859038
linux-initrd: Avoid monadic style a bit. 
* gnu/system/linux-initrd.scm (expression->initrd): Use 'program-file'
for 'init'.
(flat-linux-module-directory): Use 'computed-file' instead of
'gexp->derivation'.
(raw-initrd): Adjust accordingly.
 2017-07-04 23:45:12 +02:00
Feng Shu e208bf789c
gnu: emacs-exwm-x: Update to 1.6.2. 
* gnu/packages/emacs.scm (emacs-exwm-x): Update to 1.6.2.
 2017-07-04 22:03:15 +02:00
Feng Shu adaebe80fb
gnu: emacs-switch-window: Update to 1.5.1. 
* gnu/packages/emacs.scm (emacs-switch-window): Update to 1.5.1.
 2017-07-04 22:02:12 +02:00
Efraim Flashner ce7e361fa3
gnu: gemma: Fix building on non-Intel architectures. 
* gnu/packages/patches/gemma-intel-compat.patch: New file.
* gnu/packages/bioinformatics.scm (gemma)[source]: Add patch.
[arguments]: Add NO_INTEL_COMPAT flag on non-Intel architectures.
* gnu/local.mk (dist_patch_DATA): Register patch.
 2017-07-04 22:55:44 +03:00
Arun Isaac 0545e43a91
gnu: gajim: Update to 0.16.8. 
* gnu/packages/messaging.scm (gajim): Update to 0.16.8.
[source]: Remove patch.
* gnu/packages/patches/gajim-CVE-2016-10376.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-04 23:07:15 +05:30
宋文武 296bf4d5ab
services: Add 'sysctl-service-type'. 
* gnu/services/sysctl.scm: New file.
* doc/guix.texi (Miscellaneous Services): Document it.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-07-04 20:40:51 +08:00
Ben J Woodcroft a522517cdb
gnu: diamond: Update to 0.9.9. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.9.
 2017-07-04 19:59:01 +10:00
Ben Woodcroft 18dea67dc3
gnu: blast+: Update to 2.6.0. 
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
 2017-07-04 19:58:42 +10:00
Mark H Weaver c24ea83cd7
gnu: linux-libre: Update to 4.12. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.11-i686.conf,
gnu/packages/aux-files/linux-libre/4.11-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.12-i686.conf,
gnu/packages/aux-files/linux-libre/4.12-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Update accordingly.
 2017-07-04 04:24:58 -04:00
Efraim Flashner fdaf6cd345
gnu: qt: Update to 5.9.1. 
* gnu/packages/qt.scm (qtbase, qtsvg, qtimageformats, qtx11extras)
(qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors)
(qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel)
(qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2)
(qtgraphicaleffects, qtgamepad, qtscxml, qtpurchasing, qtcanvas3d)
(qtcharts, qtdatavis3d, qtwebkit): Update to 5.9.1.
(qtwebkit)[source]: Change to official qt location.
 2017-07-04 08:55:00 +03:00
Marius Bakke a8a964db83
gnu: python-pylint: Update to 1.7.2. 
* gnu/packages/python.scm (python-pylint): Update to 1.7.2.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-PYTEST-RUNNER.
 2017-07-04 02:52:26 +02:00
Marius Bakke de2f56cf96
gnu: python-astroid: Update to 1.5.3. 
* gnu/packages/python.scm (python-astroid): Update to 1.5.3.
[properties]: Declare python2 variant.
(python2-astroid)[propagated-inputs]: Add PYTHON2-BACKPORTS-FUNCTOOLS-LRU-CACHE,
PYTHON2-ENUM34 and PYTHON2-SINGLEDISPATCH.
 2017-07-04 02:52:26 +02:00
Marius Bakke 96bbc41f8b
gnu: python-pyopenssl: Update to 17.1.0. 
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.1.0.
[source]: Remove patch.
[native-inputs]: Add PYTHON-PRETEND.
[arguments]<#:phases>: Disable the network test here instead of via a patch.
Also disable one new test.
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-04 02:52:26 +02:00
Marius Bakke 89fc5b82d4
gnu: python-cryptography: Update to 1.9. 
* gnu/packages/python.scm (python-cryptography-vectors): Update to 1.9.
(python-cryptography): Update to 1.9.
[propagated-inputs]: Remove PYTHON-PACKAGING.
 2017-07-04 02:52:25 +02:00
Marius Bakke 029933cf79
gnu: python-cffi: Update to 1.10.0. 
* gnu/packages/python.scm (python-cffi): Update to 1.10.0.
[arguments]<#:phases>: Patch distutils.ccompiler call to use "gcc". Patch
another hard-coded cc invocation. Adjust `py.test` invocation per README.
 2017-07-04 02:52:25 +02:00
Marius Bakke 295f32f34b
gnu: python-cffi: Really enable tests. 
* gnu/packages/python.scm (python-cffi, python2-cffi)[arguments]: Replace
'check' phase with custom expression. Change to 'modify-phases' syntax.
 2017-07-04 02:52:25 +02:00
Marius Bakke 92d7e87c59
gnu: re2: Update to 2017-07-01. 
* gnu/packages/regex.scm (re2): Update to 2017-07-01.
 2017-07-04 02:52:25 +02:00
Marius Bakke 6db571cbf0
install: Drop redundant package after c0f5eee4b2. 
* gnu/system/install.scm (installation-os): Remove SHADOW.
 2017-07-04 02:52:25 +02:00
Tobias Geerinckx-Rice f88eaccf19
gnu: ibus: Update to 1.5.16. 
* gnu/packages/ibus.scm (ibus): Update to 1.5.16.
 2017-07-04 00:51:52 +02:00
Tobias Geerinckx-Rice e97b75d997
gnu: cdogs-sdl: Update to 0.6.5. 
* gnu/packages/games.scm (cdogs-sdl): Update to 0.6.5.
[inputs]: Add mesa.
[home-page]: Use HTTPS.
 2017-07-04 00:51:52 +02:00
Tobias Geerinckx-Rice e9e3a69d36
gnu: nnn: Update to 1.2. 
* gnu/packages/admin.scm (nnn): Update to 1.2.
 2017-07-04 00:51:52 +02:00
Kei Kebreau 910f1709a8
gnu: gcr: Correct patch. 
* gnu/packages/patches/gcr-disable-failing-tests.patch: Correct
erroneously committed file.

This is a follow-up to commit 85c774808f.
 2017-07-03 18:42:50 -04:00
Ludovic Courtès d5ec5ed719
packages: Mark 'replacement' as an "innate" field. 
Suggested by Mark H Weaver
at <https://lists.gnu.org/archive/html/guix-devel/2017-06/msg00355.html>.

* guix/packages.scm (<package>)[replacement]: Mark as "innate".
* gnu/packages/base.scm (glibc-2.25-patched, glibc-2.24)
(glibc-2.23, glibc-2.22, glibc-2.21, glibc-locales): Remove
'replacement' field, which was set to #f.
* gnu/packages/commencement.scm (perl-boot0): Likewise.
* gnu/packages/fontutils.scm (graphite2/fixed): Likewise.
* gnu/packages/ghostscript.scm (ghostscript/fixed): Likewise.
* gnu/packages/gnupg.scm (libgcrypt-1.7.8): Likewise.
* gnu/packages/guile.scm (guile-2.0/fixed, guile-2.2): Likewise.
* gnu/packages/icu4c.scm (icu4c/fixed): Likewise.
* gnu/packages/image.scm (libpng-apng): Likewise.
* gnu/packages/make-bootstrap.scm (%guile-static): Likewise.
* gnu/packages/pcre.scm (pcre/fixed): Likewise.
* gnu/packages/perl.scm (perl/fixed): Likewise.
* gnu/packages/ruby.scm (ruby-2.3, ruby-2.2, ruby-2.1)
(ruby-1.8): Likewise.
* gnu/packages/tls.scm (gnutls-3.5.13, gnutls/guile-2.2): Likewise.
* gnu/packages/xml.scm (expat-2.2.1): Likewise.
 2017-07-03 23:51:22 +02:00
Nicolas Goaziou f6444059dd
gnu: wine: Add stable release. 
* gnu/packages/wine.scm (wine): Refer to stable release instead of development
  one.
(wine-next): New variable.
 2017-07-03 18:10:11 +02:00
Oleg Pykhalov aadd75acd6
gnu: Add emacs-emamux. 
* gnu/packages/emacs.scm (emacs-emamux): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-07-03 22:34:40 +08:00
Danny Milosavljevic 08c1f2d21c
build: Add (gnu build file-systems) import. 
* gnu/build/vm.scm: Add (gnu build file-systems) import.
 2017-07-03 16:33:46 +02:00
Kei Kebreau 85c774808f
gnu: gcr: Enable working tests. 
* gnu/packages/patches/gcr-disable-failing-tests.patch,
gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch:
New files.
* gnu/local.mk (dist_patch_DATA): Add patches.
* gnu/packages/gnome.scm (gcr)[source]: Use patches.
[arguments]: Enable tests.
 2017-07-03 09:52:59 -04:00
Danny Milosavljevic 4f80be730e
build: Clarify error message when make-iso9660-image fails. 
* gnu/build/vm.scm (make-iso9660-image): Clarify error message.
 2017-07-03 15:13:09 +02:00
Danny Milosavljevic 1feb3076cb
build: Allow specifying volume-uuid with make-iso9660-image. 
* gnu/build/file-systems.scm (iso9660-uuid->string): Export.
* gnu/build/vm.scm (make-iso9660-image): Add volume-uuid.
 2017-07-03 15:07:25 +02:00
宋文武 1ec0c1f30e
gnu: xfce: Propagate search paths of 'xfce4-panel'. 
* gnu/packages/xfce.scm (xfce)[native-search-paths]: New field.
 2017-07-03 19:27:56 +08:00
Roel Janssen fd2d17cdae
gnu: Add emacs-sparql-mode. 
* gnu/packages/emacs.scm (emacs-sparql-mode): New variable.
 2017-07-03 13:02:07 +02:00
Danny Milosavljevic be1033a334
build: Add iso9660 system image generator. 
* build-aux/hydra/gnu-system.scm (qemu-jobs): Add 'iso9660-image .
* gnu/build/vm.scm (make-iso9660-image): New variable.  Export it.
* gnu/system/vm.scm (iso9660-image): New variable.  Use make-iso9660-image.
(system-disk-image): Use iso9660-image.
 2017-07-03 10:07:59 +02:00
Ludovic Courtès 1b0f266e40
gnu: Switch guile-cairo and dependents to Guile 2.2 again. 
Fixes <https://bugs.gnu.org/27551>.
Reported by Leo Famulari <leo@famulari.name>.

This reinstates the following commits:

  e3ddb1e83 * gnu: guile-cairo: Switch to Guile 2.2.
  ae5c6ef39 * gnu: guile-gnome: Update to 2.16.5.
  0fd8013fc * gnu: guile-rsvg: Update to commit 05c6a2fd.
  66b9183c4 * gnu: guile-lib: Switch to Guile 2.2.

and adds the following changes:

* gnu/bootloader/grub.scm (svg->png): Add 'package->derivation' call for
GUILE-2.2.  Pass #:guile-for-build to 'gexp->derivation'.
* gnu/build/svg.scm (svg->png): Add 'em' and 'ex' to the 'let-values'
form to account for all the values returned by
'rsvg-handle-get-dimensions', which Guile 2.2 does not truncate.
 2017-07-02 22:52:30 +02:00
Theodoros Foradis 61f81618a8
gnu: Add toxic. 
* gnu/packages/messaging.scm (toxic): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-02 22:52:27 +02:00
Danny Milosavljevic ed3485fa9c
linux-initrd: Add isofs if necessary. 
* gnu/system/linux-initrd.scm (base-initrd): Add isofs.
 2017-07-02 20:27:26 +02:00
Alex Kost 3fb8e281b7
gnu: emacs-guix: Update to 0.3.2. 
* gnu/packages/emacs.scm (emacs-guix): Update to 0.3.2.
[arguments]: Add '--with-guix-site-ccache-dir' configure flag, as Guix
installs its .go files separately nowadays.
 2017-07-02 20:45:18 +03:00
Danny Milosavljevic 9c0a05b31e
file-systems: iso9660-uuid->string: Use "-" as separator in the result. 
* gnu/build/file-systems.scm (iso9660-uuid->string): Use "-" as separator
in the result.
 2017-07-02 19:27:25 +02:00
Leo Famulari f277dea2e2
gnu: beets: Update to 1.4.5. 
* gnu/packages/music.scm (beets): Update to 1.4.5.
 2017-07-02 11:35:04 -04:00
Ludovic Courtès 50cb948f1c
install: Re-add /bin/sh. 
Reported by Divan Santana <divan@santanas.co.za>.
/bin/sh had disappeared in commit
387e175492.

* gnu/system/install.scm (%installation-services): Add
'special-files-service-type' instance.
 2017-07-02 16:44:59 +02:00
Leo Famulari e00a59097e
gnu: python-vobject: Update to 0.9.5. 
* gnu/packages/python.scm (python-vobject, python2-vobject): Update to 0.9.5.
 2017-07-02 09:17:20 -04:00
Leo Famulari 477aa33400
gnu: vdirsyncer: Update to 0.16.0. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.0.
[license]: Change to bsd-3.
 2017-07-02 09:17:16 -04:00
Efraim Flashner bfba12695a
gnu: ovmf: Fix build on x86_64. 
This is a follow-up to 2eb95ade8f.

* gnu/packages/firmware.scm (ovmf)[arguments]: Fix the syntax used when
following the x86_64 fork of the arguments.
 2017-07-02 13:13:35 +03:00
Efraim Flashner dd78efe39a
gnu: font-google-noto: Update to 20170403. 
* gnu/packages/fonts.scm (font-google-noto): Update to 20170403.
[source]: Update source uri.
 2017-07-01 23:45:20 +03:00
Efraim Flashner fc19cee18c
gnu: font-gnu-unifont: Update to 10.0.03. 
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.03.
[properties]: Add 'upstream-name' to ease updates.
 2017-07-01 23:45:19 +03:00
Leo Famulari 5ace0919c2
Revert "gnu: guile-lib: Switch to Guile 2.2." 
This reverts commit 66b9183c4f.
 2017-07-01 16:08:47 -04:00
Leo Famulari 6b820ef15d
Revert "gnu: guile-rsvg: Update to commit 05c6a2fd." 
This reverts commit 0fd8013fca.
 2017-07-01 16:08:47 -04:00
Leo Famulari 5e1f9b3042
Revert "gnu: guile-gnome: Update to 2.16.5." 
This reverts commit ae5c6ef393.
 2017-07-01 16:08:47 -04:00
Leo Famulari f3bb868a71
Revert "gnu: guile-cairo: Switch to Guile 2.2." 
This commit caused the build of grub-image.png to fail, prevent the
build of grub.cfg and reconfiguring of GuixSD:

<https://bugs.gnu.org/27551>

This reverts commit e3ddb1e832.
 2017-07-01 16:08:47 -04:00
Leo Famulari dc03f32dea
gnu: guile-git: Update source URL. 
* gnu/packages/guile.scm (guile-git)[source]: Update URL.
 2017-07-01 15:25:21 -04:00
Ben Woodcroft ba773f65f0
gnu: cd-hit: Update to 4.6.8. 
* gnu/packages/bioinformatics.scm (cd-hit): Update to 4.6.8.
 2017-07-01 10:49:37 +10:00
Ben Woodcroft fd99d95b3f
gnu: bwa: Update to 0.7.15. 
* gnu/packages/bioinformatics.scm (bwa): Update to 0.7.15.
 2017-07-01 09:48:20 +10:00
Tobias Geerinckx-Rice 97d451540c
gnu: btrfs-progs: Update to 4.11.1. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.11.1.
 2017-07-01 01:23:41 +02:00
Tobias Geerinckx-Rice 0c7ce625b7
gnu: tor: Update to 0.3.0.9 [fixes CVE-2017-0377]. 
* gnu/packages/tor.scm (tor): Update to 0.3.0.9.
 2017-07-01 00:20:53 +02:00
Feng Shu f4ade9b6c8
gnu: Add emacs-exwm-x. 
* gnu/packages/emacs.scm (emacs-exwm-x): New variable.
 2017-06-30 23:30:31 +02:00
Feng Shu 58addd2b20
gnu: Add emacs-switch-window. 
* gnu/packages/emacs.scm (emacs-switch-window): New variable.
 2017-06-30 23:30:31 +02:00
Ludovic Courtès e3ddb1e832
gnu: guile-cairo: Switch to Guile 2.2. 
This patch adjusts dependent packages accordingly.

* gnu/packages/gtk.scm (guile-cairo)[inputs]: Switch to GUILE-2.2 and
GUILE-LIB.
(guile-rsvg)[inputs]: Likewise.
(guile-present)[inputs]: Likewise.
(guile-gnome)[inputs]: Likewise.
* gnu/packages/plotutils.scm (guile-charting)[inputs]: Switch go
GUILE-2.2.
 2017-06-30 23:20:34 +02:00
Ludovic Courtès ae5c6ef393
gnu: guile-gnome: Update to 2.16.5. 
* gnu/packages/gtk.scm (guile-gnome): Update to 2.16.5.
[arguments] <pre-configure>: Use @GUILE_EFFECTIVE_VERSION@ instead of
"2.0".
[properties]: New field.
 2017-06-30 23:20:34 +02:00
Ludovic Courtès 0fd8013fca
gnu: guile-rsvg: Update to commit 05c6a2fd. 
* gnu/packages/gtk.scm (guile-rsvg): Update to commit 05c6a2fd.
[source](url): Change to gitlab.com.
(snippet): Use @GUILE_EFFECTIVE_VERSION@ instead of "2.0".
* gnu/packages/patches/guile-rsvg-pkgconfig.patch: Use
"$GUILE_EFFECTIVE_VERSION" instead of "2.0".
 2017-06-30 23:20:34 +02:00
Ludovic Courtès 66b9183c4f
gnu: guile-lib: Switch to Guile 2.2. 
* gnu/packages/guile.scm (guile-lib)[inputs]: Replace GUILE-2.0 with
GUILE-2.2.
(guile2.0-lib): New variable.
(guile2.2-lib): Mark as deprecated.
* gnu/packages/guile.scm (guile-ics): Use GUILE2.0-LIB.
* gnu/packages/gtk.scm (guile-cairo, guile-rsvg)
(guile-present, guile-gnome): Likewise.
* gnu/packages/skribilo.scm (skribilo): Likewise.
 2017-06-30 23:20:33 +02:00
Ludovic Courtès 30f17d73d6
gnu: guile-lib: Update to 0.2.5.1. 
* gnu/packages/guile.scm (guile-lib): Update to 0.2.5.1.
 2017-06-30 23:20:33 +02:00
Leo Famulari f48a9d4a46
gnu: npth: Update to 1.5. 
* gnu/packages/gnupg.scm (npth): Update to 1.5.
 2017-06-30 16:54:05 -04:00
Leo Famulari 9570b01631
gnu: libreoffice: Update to 5.3.2.2. 
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.3.2.2.
 2017-06-30 16:11:45 -04:00
Ludovic Courtès 798b7678a0
gnu: hwloc: Add "lib" and "debug" outputs. 
* gnu/packages/mpi.scm (hwloc)[outputs]: New field.
[arguments]: Add 'avoid-circular-references' phase.
(openmpi)[inputs]: Use the "lib" output of HWLOC.
* gnu/packages/parallel.scm (slurm)[inputs]: Likewise.
 2017-06-30 18:44:41 +02:00
Ludovic Courtès 7eb9f31cd9
gnu: hwloc: Use /var as the localstatedir. 
* gnu/packages/mpi.scm (hwloc)[arguments]: Add #:configure-flags.
 2017-06-30 18:44:41 +02:00
Gregor Giesen 2973ebf504
gnu: Add mkvtoolnix. 
* gnu/packages/video.scm (mkvtoolnix): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-06-30 12:43:41 -04:00
Gregor Giesen 15f1d02aad
gnu: Add libmatroska. 
* gnu/packages/video.scm (libmatroska): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-06-30 12:43:41 -04:00
Gregor Giesen 5bc2d5798d
gnu: Add libebml. 
* gnu/packages/xml.scm (libebml): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-06-30 12:43:41 -04:00
Gregor Giesen bf7c369940
gnu: Add nlohmann-json-cpp. 
* gnu/packages/serialization.scm (nlohmann-json-cpp): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-06-30 12:43:40 -04:00
Leo Famulari ecb232bdfc
gnu: isc-dhcp: Update bundled bind to 9.9.10-P2 [fixes CVE-2017-{3142,3143}]. 
* gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.10-P2.
 2017-06-30 11:59:31 -04:00
Leo Famulari faa1369e3c
gnu: bind: Update to 9.11.1-P2 [fixes CVE-2017-{3142,3143}]. 
* gnu/packages/dns.scm (isc-bind): Update to 9.11.1-P2.
 2017-06-30 11:59:28 -04:00
Arun Isaac 0ac042324a
gnu: Add jo. 
* gnu/packages/web.scm (jo): New variable.
 2017-06-30 20:02:13 +05:30
Oleg Pykhalov c97979d629
gnu: Add emacs-org-edit-latex. 
* gnu/packages/emacs.scm (emacs-org-edit-latex): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-06-30 19:09:32 +05:30
Ricardo Wurmus 3a4d5df2b0
gnu: itpp: Use texlive-tiny and ghostscript. 
* gnu/packages/maths.scm (itpp)[native-inputs]: Replace texlive-minimal with
texlive-tiny; add ghostscript.
 2017-06-30 13:57:42 +02:00
Ricardo Wurmus 612a387fe7
gnu: gnuplot: Use texlive-tiny. 
* gnu/packages/maths.scm (gnuplot)[native-inputs]: Replace texlive-minimal
with texlive-tiny.
 2017-06-30 13:57:41 +02:00
Ricardo Wurmus a023ec6e4c
gnu: giac-xcas: Use texlive-tiny. 
* gnu/packages/algebra.scm (giac-xcas)[inputs]: Replace texlive-minimal with
texlive-tiny.
 2017-06-30 13:57:41 +02:00
Ricardo Wurmus a8b0948b7c
gnu: pari-gp: Use texlive-tiny. 
* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Replace texlive-minimal
with texlive-tiny.
 2017-06-30 13:57:41 +02:00
Ricardo Wurmus 84889519bb
gnu: po4a: Use texlive-tiny. 
* gnu/packages/gettext.scm (po4a)[native-inputs]: Replace texlive-minimal with
texlive-tiny.
 2017-06-30 13:57:41 +02:00
Ludovic Courtès 87941d1df4
system: Use "@" to refer to the 'shadow' package. 
Reported by Mark H Weaver
at <https://lists.gnu.org/archive/html/guix-devel/2017-06/msg00349.html>.

* gnu/system.scm (%base-packages): Use '@' for shadow.  This fixes an
error on Guile 2.0 where 'shadow' alone resolves to the (gnu system
shadow) module.
 2017-06-30 11:27:30 +02:00
Mark H Weaver 588b22575d
gnu: linux-libre: Update to 4.11.8. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.11.8.
(%linux-libre-hash): Update hash.
 2017-06-30 00:13:36 -04:00
Mark H Weaver 426187d278
gnu: linux-libre@4.9: Update to 4.9.35. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.35.
 2017-06-30 00:12:55 -04:00
Mark H Weaver 5d7f9c156e
gnu: linux-libre@4.4: Update to 4.4.75. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.75.
 2017-06-30 00:12:16 -04:00
Mark H Weaver 5a1b5dccf0
gnu: linux-libre@4.1: Update to 4.1.42 [mitigates CVE-2017-1000364]. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.42.
 2017-06-30 00:11:10 -04:00
Ludovic Courtès a2278922fe
vm: Use 'fold2' from (guix combinators). 
* gnu/build/vm.scm: Use (guix combinators).
(fold2): Remove.
 2017-06-30 00:16:51 +02:00
Ludovic Courtès a8ac4f081a
vm: Estimate the disk size by default. 
* gnu/build/vm.scm (estimated-partition-size): New procedure.
* gnu/system/vm.scm (expression->derivation-in-linux-vm):
Change #:disk-image-size default to 'guess.
[builder]: When DISK-IMAGE-SIZE is 'guess, use
'estimated-partition-size' and compute and estimate of the image size.
(qemu-image): Likewise.
* guix/build/store-copy.scm (file-size, closure-size): New procedures.
* guix/scripts/system.scm (%default-options): Change 'image-size' to
'guess.
* doc/guix.texi (Building the Installation Image): Remove '--image-size'
flag from example.
(Invoking guix system): Document the image size estimate.
 2017-06-30 00:16:50 +02:00
Ludovic Courtès a2cf57e79e
vm: Display the disk and partition sizes. 
* gnu/build/vm.scm (load-in-linux-vm): Add 'format' call when
MAKE-DISK-IMAGE? is true.
(initialize-partition-table): Show the size of the partitions being
created.
 2017-06-30 00:16:50 +02:00
Ludovic Courtès 6efb98ed3c
vm: Fix 'load-in-linux-vm' docstring. 
* gnu/build/vm.scm (load-in-linux-vm): Change default value of
  #:disk-image-size.  Update docstring to note that DISK-IMAGE-SIZE is
  in bytes.
 2017-06-30 00:16:50 +02:00
Leo Famulari 95bbaa02aa
gnu: poppler: Fix CVE-2017-{9775,9776}. 
* gnu/packages/pdf.scm (poppler)[replacement]: New field.
(poppler-0.56.0): New variable.
(poppler-qt4, poppler-qt5): Use 'package/inherit'.
 2017-06-29 16:40:10 -04:00
Efraim Flashner 1b6d3b7a23
gnu: thermald: Add file-name for source. 
* gnu/packages/admin.scm (thermald)[source]: Add file-name field.
 2017-06-29 23:09:24 +03:00
Efraim Flashner 86ee76254b
gnu: thermald: Only build on i686 and x86_64. 
* gnu/packages/admin.scm (thermald)[supported-systems]: New field.
 2017-06-29 23:08:17 +03:00
Efraim Flashner ef2c7fb5da
gnu: libgcrypt: Add mitigation for CVE-2017-7526. 
* gnu/packages/gnupg.scm (libgcrypt)[replacment]: New field.
(libgcrypt-1.7.8): New variable.
(libgcrypt-1.5)[replacment]: New field.
 2017-06-29 21:04:33 +03:00
Jan Nieuwenhuizen 604e494dc0
gnu: mes: Update to 0.8. 
* gnu/packages/mes.scm (mes): Update to 0.8.
 2017-06-29 18:11:34 +02:00
Jan Nieuwenhuizen 9ae3fcb9e8
gnu: Add mescc-tools. 
* gnu/packages/mes.scm (mescc-tools): New variable.
 2017-06-29 18:09:42 +02:00
Ludovic Courtès c0f5eee4b2
system: Add 'shadow' to %BASE-PACKAGES. 
Suggested by Göktuğ Kayaalp <self@gkayaalp.com>.

* gnu/system.scm (%base-packages): Add SHADOW.
 2017-06-29 16:28:28 +02:00
Ricardo Wurmus b8d3a000ef
gnu: libxfce4ui: Do not propagate gtk+-2. 
Propagation of both gtk+ and gtk+-2 causes a conflict to be detected,
preventing the installation of xfce.

* gnu/packages/xfce.scm (libxfce4ui)[propagated-inputs]: Move "gtk+-2"...
[inputs]: ...to here.
(garcon)[inputs]: Add "gtk+-2".
(xfce4-appfinder)[inputs]: Add "gtk+-2".
(xfce4-power-manager)[inputs]: Add "gtk+-2".
(ristretto)[inputs]: Add "gtk+-2".
 2017-06-29 16:06:14 +02:00
Ricardo Wurmus c860d6ef23
gnu: xfce: Build union instead of propagating inputs. 
* gnu/packages/xfce.scm (xfce)[propagated-inputs]: Move all...
[inputs]: ...here.
[arguments]: Build a union.
 2017-06-29 16:06:14 +02:00
Alex Vong d34970ee2b
gnu: clojure: Update "tools-reader-src" to 1.0.0. 
* gnu/packages/java.scm (clojure)[inputs]: Update "tools-reader-src" to
1.0.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-06-29 15:21:18 +02:00
Dave Love a73e7dd3b0
gnu: Add procenv. 
* gnu/packages/linux.scm (procenv): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-06-29 15:21:18 +02:00
Jelle Licht b786661309
gnu: ansible: Apply experimental patch to deal with wrapping of ansible script. 
See <http://lists.gnu.org/archive/html/bug-guix/2017-05/msg00015.html> for the
rationale.

* gnu/packages/patches/ansible-wrap-program-hack.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (ansible)[source]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-06-29 15:21:18 +02:00
Jelle Licht aafcfffd93
gnu: node: Update to 8.1.2. 
* gnu/packages/node.scm (node): Update to 8.1.2.
(node)[arguments]: Disabled more tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-06-29 15:21:18 +02:00
Ludovic Courtès 3ab869b63f
gnu: lapack: Install libraries to PREFIX/lib, not PREFIX/lib64. 
This fixes a regression introduced in
ef39a17717, which would break
python-scipy ("undefined reference to `zungqr_'").

* gnu/packages/maths.scm (lapack)[arguments]: Add
"-DCMAKE_INSTALL_LIBDIR" to #:configure-flags.
 2017-06-29 15:21:17 +02:00
Efraim Flashner 2eb95ade8f
gnu: ovmf: Only build 32-bit firmware on i686-linux. 
* gnu/packages/firmware.scm (ovmf)[arguments]: Only when the build
machine is x86_64-linux should the 64-bit firmware be built and
installed.
 2017-06-29 12:54:54 +03:00
Efraim Flashner 8363a83517
gnu: openh264: Fix building on armhf and aarch64. 
* gnu/packages/video.scm (openh264)[arguments]: Add 'CC=gcc' to
the #:make-flags.
 2017-06-29 11:44:49 +03:00
Efraim Flashner fcf4003950
gnu: r-spams: Update to 2.6-2017-03-22. 
* gnu/packages/statistics.scm (r-spams): Update to 2.6-2017-03-22.
[arguments]: Remove R-3.3 work-around and syntax fixes, add phase to
prevent tuning r-spams to the compiling hardware.
 2017-06-29 10:02:58 +03:00
Eric Bavier 691ae7fa7a
gnu: wdiff: Remove unused screen input. 
* gnu/packages/wdiff.scm (wdiff): 'inputs' -> 'native-inputs'.
[native-inputs]: Remove unused screen input.
[arguments]: Use modify-phases.
 2017-06-28 23:25:23 -05:00
Eric Bavier 57dfc9f86c
gnu: screen: Update to 4.6.0. 
* gnu/packages/screen.scm (screen): Update to 4.6.0.
[source]: Remove patch.
* gnu/packages/patches/screen-fix-info-syntax-error.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-06-28 22:59:41 -05:00