Commit Graph

1429 Commits (a54aefead6bfcc35bce0ac2aebb4cd32eb94208e)

Author SHA1 Message Date
Eric Bavier a54aefead6 gnu: Add superlu-dist package.
* gnu/packages/maths.scm (superlu-dist): New variable.
* gnu/packages/patches/superlu-dist-scotchmetis.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2014-05-19 00:15:11 -05:00
Eric Bavier 6acb4adb34 gnu: Add pt-scotch package.
* gnu/packages/maths.scm (pt-scotch): New variable.
2014-05-19 00:15:11 -05:00
Eric Bavier f8ed036a31 gnu: Add scotch package.
* gnu/packages/maths.scm (scotch): New variable.
* gnu/packages/patches/scotch-test-threading.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2014-05-19 00:15:11 -05:00
Ludovic Courtès d5b429abda system: Add 'grub-configuration' record.
* gnu/system/grub.scm (<grub-configuration>): New record type.
  (grub-configuration-file): Add 'config' parameter; remove
  #:default-entry and #:timeout.  Honor CONFIG.
* gnu/system.scm (<operating-system>): Remove 'bootloader-entries'
  field; remove default value for 'bootloader' field.
  (operating-system-grub.cfg): Pass the 'bootloader' field to
  'grub-configuration-file'.
* build-aux/hydra/demo-os.scm (bootloader): New field.
2014-05-18 22:27:23 +02:00
Eric Bavier 1691b4cdc6 gnu: openmpi: Add memchecker support.
* gnu/packages/mpi.scm (openmpi) [inputs]: Add valgrind.  Unpropagate
  gfortran.  [arguments]: Add configure flags for memchecker.
2014-05-18 11:09:42 -05:00
Ludovic Courtès b4140694ac system: Make /run/current-system at activation time.
* gnu/system.scm (etc-directory): Change default value of #:profile.
  Change contents of SHELLS.  Use /run/current-system/profile/{s,}bin in
  BASHRC.
  (operating-system-boot-script)[%modules]: Add (guix build
  linux-initrd).  Add call to 'activate-current-system' in gexp.
  (operating-system-initrd-file, operating-system-grub.cfg): New
  procedures.
  (operating-system-derivation): Don't build grub.cfg here and remove it
  from the file union.
* gnu/system/vm.scm (qemu-image): Remove #:populate.
  (operating-system-build-gid, operating-system-default-contents):
  Remove.
  (system-qemu-image): Remove call to
  'operating-system-default-contents'.  Use 'operating-system-grub.cfg'
  to get grub.cfg.  Add GRUB.CFG to #:inputs.
  (system-qemu-image/shared-store): Likewise, but don't add GRUB.CFG to
  #:inputs.
  (system-qemu-image/shared-store-script): Pass --system kernel option.
* guix/build/activation.scm (%booted-system, %current-system): New
  variables.
  (boot-time-system, activate-current-system): New procedures.
* guix/build/install.scm (evaluate-populate-directive): Add case
  for ('directory name uid gid mode).
  (directives, populate-root-file-system): New procedures.
* guix/build/vm.scm (initialize-hard-disk): Replace calls to
  'evaluate-populate-directive' by a call to
  'populate-root-file-system'.
* gnu/services/dmd.scm (dmd-configuration-file): Use
  /run/current-system/profile/bin.
* gnu/services/xorg.scm (slim-service): Likewise.
2014-05-18 00:04:01 +02:00
Andreas Enge bf43449ace gnu: soprano: Add input redland.
* gnu/packages/rdf.scm (soprano): Add inputs redland and rasqal, drop raptor2
    (propagated by rasqal).
2014-05-17 17:53:39 +02:00
Andreas Enge af6fce0fd1 gnu: Add redland.
* gnu/packages/rdf.scm (redland): New variable.
2014-05-17 17:53:39 +02:00
Andreas Enge 85d83c3b7b gnu: rasqal: Propagate input raptor2.
* gnu/packages/rdf.scm (rasqal): Propagate input raptor2 as indicated in
    the pkg-config file.
2014-05-17 17:53:39 +02:00
Andreas Enge 1634c0420e gnu: Add rasqal.
* gnu/packages/rdf.scm (rasqal): New variable.
2014-05-17 14:43:34 +02:00
Ludovic Courtès 90f69c2ec5 gnu: Add libuv.
* gnu/packages/libevent.scm (libuv): New variable.
2014-05-16 15:45:25 +02:00
Ludovic Courtès 5ce3defed1 system: Add (guix build install) module.
* guix/build/vm.scm (install-grub, evaluate-populate-directive,
  reset-timestamps, register-closure): Move to...
* guix/build/install.scm: ... here.  New file.
* Makefile.am (MODULES): Add it.
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Add (guix
  build install) to #:modules.
2014-05-15 23:37:46 +02:00
Ludovic Courtès 150e20ddde vm: Support initialization of the store DB when the store is shared.
* gnu/system/vm.scm (qemu-image): Rename #:inputs-to-copy to #:inputs,
  and #:initialize-store? to #:register-closures?.  Add #:copy-inputs?.
  Adjust build gexp accordingly.
  (system-qemu-image): Remove #:initialize-store? argument and add
  #:copy-inputs?.
  (system-qemu-image/shared-store): Add #:inputs, #:register-closures?,
  and #:copy-inputs? arguments.
* guix/build/vm.scm (register-closure): New procedure.
  (MS_BIND): New variable.
  (initialize-hard-disk): Rename #:initialize-store? to
  #:register-closures?, #:closures-to-copy to #:closures, and add
  #:copy-closures?.
  Add 'target-directory' and 'target-store' variables.
  Call 'populate-store' only when COPY-CLOSURES?.
  Bind-mount the store to TARGET-STORE when REGISTER-CLOSURES? and not
  COPY-CLOSURES?.  Add call to 'register-closure'.
2014-05-15 22:55:14 +02:00
Ludovic Courtès 2717a89a84 system: Provide declarations for the 'fusectl' and 'binfmt_misc' file systems.
* gnu/system.scm (%fuse-control-file-system,
  %binary-format-file-system): New variables.
* build-aux/hydra/demo-os.scm (file-systems): New field.
2014-05-14 23:17:03 +02:00
Ludovic Courtès 1eeccc2f31 vm: Keep acceptable file systems from the original OS.
* gnu/system/vm.scm (virtualized-operating-system): Instead of
  completely overriding 'file-systems', use 'remove' to filter out some
  of those declared in OS.
  (system-qemu-image): Likewise.
2014-05-14 23:15:51 +02:00
Ludovic Courtès 4106c58988 gnu: xterm: Upgrade to 304.
* gnu/packages/xorg.scm (xterm): Upgrade to 304.  Switch to a
  version-specific URL.
2014-05-14 23:02:10 +02:00
Ludovic Courtès 7d57cfd3b6 system: When unionfs-fuse is used for /, don't kill it when halting.
* guix/build/linux-initrd.scm (pidof): New procedure.
  (mount-root-file-system)[mark-as-not-killable]: New procedure.
  Use it for unionfs when VOLATILE-ROOT?.
* gnu/services/base.scm (%do-not-kill-file): New variable.
  (user-processes-service)[stop]: Honor it.
2014-05-14 19:07:03 +02:00
Andreas Enge 211345b3a5 gnu: libsm: Propagate input libice.
* gnu/packages/xorg.scm (libsm): Propagate input libice.
2014-05-14 16:04:42 +02:00
Andreas Enge c98f2ff309 gnu: qt-4: Upgrade to 4.8.6.
* gnu/packages/qt.scm (qt-4): Upgrade to 4.8.6.
2014-05-14 15:53:00 +02:00
Andreas Enge e7e5a4f8d4 gnu: qt-4: Enable session management by adding libsm as an input.
* gnu/packages/qt.scm (qt-4): Add input qt-4.
2014-05-14 14:32:22 +02:00
Ludovic Courtès 5a84a6c314 vm: Pass '-serial stdio' in the run-vm.sh.
* gnu/system/vm.scm (system-qemu-image/shared-store-script): Add
  '-serial stdio'.
2014-05-14 01:02:46 +02:00
Ludovic Courtès 838d9a9ddb system: Move skeleton code to (gnu system shadow).
* gnu/system.scm (default-skeletons, skeleton-directory): Move to...
* gnu/system/shadow.scm: ... here.
2014-05-14 01:02:46 +02:00
Ludovic Courtès 1a389e8d21 system: Add skeleton '.gdbinit'.
* gnu/system.scm (default-skeletons): Add .gdbinit.
2014-05-14 01:02:46 +02:00
Eric Bavier 5b527256ee gnu: openmpi: Use our hwloc.
* gnu/packages/mpi.scm (hwloc): Propagate numactl.
  (openmpi)[inputs]: Add hwloc.
  [native-inputs]: Add pkg-config.
  [argument]: Add hwloc configure flags.
2014-05-12 17:20:32 -05:00
Ludovic Courtès a37b807769 gnu: Add babl.
* gnu/packages/gimp.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2014-05-12 23:55:28 +02:00
Ludovic Courtès 40281c5424 system: Populate /etc/skel.
* gnu/system.scm (<operating-system>)[skeletons]: New field.
  (default-skeletons, skeleton-directory): New procedures.
  (etc-directory): Add #:skeletons parameter.  Call
  'skeleton-directory', and produce the 'skel' sub-directory.
  (operating-system-etc-directory): Pass #:skeletons to
  'etc-directory'.
2014-05-12 23:55:28 +02:00
Eric Bavier f5ea273a00 gnu: perl-tk: Patch for i686
* gnu/packages/patches/perl-tk-x11-discover.patch: New patch.
* gnu-system.am [dist_patch_DATA]: Add it.
* gnu/packages/tcl.scm (perl-tk)[origin]: Use it.
2014-05-12 16:15:31 -05:00
Ludovic Courtès ab6a279abb system: Make accounts and groups at activation time.
* gnu/services/base.scm (guix-build-accounts): Remove #:gid parameter;
  add #:group.  Remove 'password' and 'gid' fields in 'user-account'
  form, and add 'group'.
  (guix-service): Remove #:build-user-gid parameter.  Remove 'id' field
  in 'user-group' form.
* gnu/system.scm (etc-directory): Remove #:groups and #:accounts.  No
  longer produce files "passwd", "shadow", and "group".  Adjust caller
  accordingly.
  (%root-account): New variable.
  (operating-system-accounts): Add 'users' variable.  Add %ROOT-ACCOUNT
  only of 'operating-system-users' doesn't already contain a root
  account.
  (user-group->gexp, user-account->gexp): New procedures.
  (operating-system-boot-script): Add calls to 'setenv' and
  'activate-users+groups' in gexp.
* gnu/system/linux.scm (base-pam-services): Add PAM services for
  "user{add,del,mode}" and "group{add,del,mod}".
* gnu/system/shadow.scm (<user-account>)[gid]: Rename to...
  [group]: ... this.
  [supplementary-groups]: New field.
  [uid, password]: Default to #f.
  (<user-group>)[id]: Default to #f.
  (group-file, passwd-file): Remove.
* gnu/system/vm.scm (operating-system-default-contents)[user-directories]:
  Remove.  Add "/home" to the directives.
* guix/build/activation.scm (add-group, add-user,
  activate-users+groups): New procedures.
2014-05-11 22:41:58 +02:00
Ludovic Courtès 057d6ce5e4 services: xorg: Fix harmless typo in slim.cfg.
* gnu/services/xorg.scm (slim-service): Add missing whitespace in
  XINITRC invocation.
2014-05-11 22:41:58 +02:00
John Darrington 7e0c23fb3e gnu: pspp: Upgrade to 0.8.3
* gnu/packages/maths.scm (pspp): Update to 0.8.3.
2014-05-11 13:42:49 +02:00
Ludovic Courtès f3bde2ff9f vm: Fix recently-introduced regression in 'operating-system-services' use.
* gnu/system/vm.scm (operating-system-build-gid): Adjust to new return
  type of 'operating-system-services' introduced in 217a5b8.
2014-05-10 23:56:45 +02:00
Ludovic Courtès 023f391c78 services: Add 'file-system-service'.
* gnu/services/base.scm (file-system-service): New procedure.
  (user-processes-service): Add 'requirements' parameter.
* gnu/services/dmd.scm (dmd-configuration-file): Use (guix build
  linux-initrd).
* guix/build/linux-initrd.scm (guix): Export 'check-file-system'.
* gnu/system.scm (file-union): New procedure.
  (essential-services): Use it.  Add that to the returned list.
2014-05-10 23:33:52 +02:00
Ludovic Courtès 23ed63a12d services: Use (guix build syscalls) instead of util-linux.
* gnu/services/dmd.scm (dmd-configuration-file): Add derivations for
  the (guix build syscalls) module, and add that to the load path of
  dmd.conf.
* gnu/services/base.scm (root-file-system-service): Rewrite using the
  'sync' and 'mount' procedures.
2014-05-10 22:58:22 +02:00
Ludovic Courtès 217a5b852e system: Automatically add essential services.
* gnu/services/base.scm (%base-services): Remove calls to
  'host-name-service', 'user-processes-service', and
  'root-file-system-service'.
* gnu/system.scm (<operating-system>)[operating-system-services]: Rename
  to...
  [operating-system-user-services]: ... this.
  (essential-services, operating-system-services): New procedures.
  (operating-system-accounts, operating-system-etc-directory,
  operating-system-boot-script, operating-system-derivation): Adjust to
  new 'operating-system-services' return type.
2014-05-09 22:59:18 +02:00
Eric Bavier e5c66f8c7b gnu: fftw: Factor out OpenMPI dependency.
* gnu/packages/algebra.scm (fftw)[inputs,arguments]: Remove OpenMPI.
  (fftw-openmpi): New variable.
2014-05-09 09:03:38 -05:00
Ludovic Courtès 2b0d560a3f gnu: Add hwloc.
* gnu/packages/mpi.scm (hwloc): New variable.
  (openmpi): Add TODO comment.
2014-05-09 15:49:08 +02:00
Ludovic Courtès 42422cc2f1 gnu: Add pciutils.
* gnu/packages/pciutils.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2014-05-09 15:48:15 +02:00
Ludovic Courtès 67b660037c gnu: Add numactl.
* gnu/packages/linux.scm (numactl): New variable.
2014-05-09 14:55:12 +02:00
Eric Bavier 85a84cbd83 gnu: openmpi: Fix typo in download uri
* gnu/packages/mpi.scm (openmpi)[origin]: Fix typo.
2014-05-08 17:06:46 -05:00
Eric Bavier 0fc54d4b31 gnu: fftw: Add dependency on openmpi.
* gnu/packages/algebra.scm (fftw)[inputs,arguments]: Add OpenMPI.
2014-05-08 17:00:27 -05:00
Eric Bavier 2cf287df59 gnu: fftw: Upgrade to 3.3.4
* gnu/packages/algebra.scm (fftw): Upgrade to 3.3.4.
2014-05-08 17:00:27 -05:00
Ludovic Courtès a00dd9fbf4 services: Add service to cleanly unmount the root file system.
* gnu/services/base.scm (root-file-system-service,
  user-processes-service): New procedures.
  (mingetty-service, nscd-service, syslog-service, guix-service): Add
  requirement on 'user-processes'.
  (%base-services): Add (user-processes-service)
  and (root-file-system-service).
* gnu/services/xorg.scm (slim-service): Add requirement on
  'user-processes'.
2014-05-08 23:42:15 +02:00
Eric Bavier 8ede638c4b gnu: openmpi: Avoid "open source" verbiage
* gnu/packages/mpi.scm (openmpi)[synopsis,description]: Remove mention
  of "open source".
2014-05-08 14:48:59 -05:00
Eric Bavier d8c7eeb996 gnu: Add petsc-openmpi.
* gnu/packages/maths.scm (petsc-openmpi): New variable.
  (petsc-complex-openmpi): New variable.
2014-05-08 12:42:17 -05:00
Eric Bavier 10b11968c8 gnu: petsc: Clean some more leaked chroot references
* gnu/packages/maths.scm (petsc)[arguments]: Scrub some
  config-generated header files before build.  Only remove files if
  they exist.
2014-05-08 12:42:17 -05:00
Eric Bavier fb0e370928 gnu: Add OpenMPI
* gnu/packages/mpi.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2014-05-08 12:42:17 -05:00
Ludovic Courtès ce2df078d7 gnu: Make $XDG_DATA_DIRS a search path variable for GLib.
* gnu/packages/glib.scm (glib): Add 'native-search-paths' and
  'search-paths' fields.
* gnu/packages/gnome.scm (libpeas): Remove 'arguments' field.
  (librsvg)[arguments]: Remove #:modules and #:imported-modules.
  Remove settings of INTROSPECTION_SCANNER_ARGS and
  INTROSPECTION_COMPILER_ARGS in makefiles.
* gnu/packages/gtk.scm (gtk+): Likewise.
2014-05-06 23:10:11 +02:00
Ludovic Courtès 141aed8087 gnu: gobject-introspection is usually meant to be a native input.
* gnu/packages/gtk.scm (atk, pango, gdk-pixbuf, gtk+): Move
  gobject-introspection to 'native-inputs' since it's only used at build
  time.
* gnu/packages/gnome.scm (libpeas): Move pkg-config,
  gobject-introspection, and intltool to 'native-inputs'.
2014-05-06 22:47:21 +02:00
Ludovic Courtès 63016e7cd0 gnu: Add librsvg.
* gnu/packages/gnome.scm (librsvg): New variable.
2014-05-06 22:29:55 +02:00
Ludovic Courtès 26a728eb09 linux-initrd: Delete files from the initrd ramfs when switching roots.
* guix/build/linux-initrd.scm (switch-root): Delete file from the old
  root.  Chdir to / after 'chroot' call.  Re-open file descriptors 0, 1,
  and 2.
  (boot-system): Move 'loading' message after the 'switch-root' call.
* gnu/system.scm (operating-system-boot-script): Add loop that closes
  file descriptor before calling 'execl'.
2014-05-06 18:18:22 +02:00