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Author SHA1 Message Date
Ricardo Wurmus 42f0b0c21e
gnu: Add missing module reference. 
This is a follow-up to commit 05b4b3ea05.

* gnu/packages/python-xyz.scm: Add missing reference to (gnu packages
monitoring).
 2019-02-04 12:05:43 +01:00
Ricardo Wurmus d9b0216b6f
gnu: python-send2trash: Remove duplicates. 
* gnu/packages/python-xyz.scm (python-send2trash, python2-send2trash): Remove
duplicates.
[source]: Fetch from git.
 2019-02-04 11:57:14 +01:00
Ricardo Wurmus 05b4b3ea05
gnu: python-prometheus-client: Remove duplicate. 
* gnu/packages/monitoring.scm (python-prometheus-client): Update to 0.5.0.
* gnu/packages/python-xyz.scm (python-prometheus-client,
python2-prometheus-client): Remove variables.
 2019-02-04 11:46:10 +01:00
Ricardo Wurmus 15218d4e18
gnu: guile-wisp: Update to 0.9.9.1. 
* gnu/packages/guile-xyz.scm (guile-wisp): Update to 0.9.9.1.
[arguments]: Add phases to build and install Emacs files.
[native-inputs]: Add emacs-minimal.
 2019-02-04 11:15:52 +01:00
Vagrant Cascadian 8c00379c47
gnu: 0ad: Update to 0.0.23b-alpha. 
* gnu/packages/games.scm (0ad-data, 0ad): Update to 0.0.23b-alpha.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-02-04 10:49:10 +01:00
Ricardo Wurmus 1e957fabcf
gnu: borg: Make man pages reproducible. 
* gnu/packages/backup.scm (borg)[arguments]: Add
"remove-documentation-timestamps" phase.
 2019-02-04 10:49:10 +01:00
Tobias Geerinckx-Rice 26b7d23aa6
gnu: containerd: Update to 1.2.2. 
* gnu/packages/docker.scm (containerd): Update to 1.2.2.
 2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice 17d25019fd
gnu: docker-cli: Use HTTPS home page. 
* gnu/packages/docker.scm (docker-cli)[home-page]: Use HTTPS.
 2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice 3cfa236e56
gnu: freeipmi: Update to 1.6.3. 
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.6.3.
 2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice b29909b40e
gnu: Remove duplicate import from (gnu packages gnome). 
* gnu/packages/messaging.scm (define-module): Remove duplicate module
imports.  Order the remainder alphabetically.
 2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice 7a66d8a464
gnu: gnome-mpv: Update to 0.16. 
* gnu/packages/video.scm (gnome-mpv): Update to 0.16.
 2019-02-04 09:39:11 +01:00
Tobias Geerinckx-Rice f0e6859310
gnu: jo: Update to 1.2. 
* gnu/packages/web.scm (jo): Update to 1.2.
 2019-02-04 09:39:11 +01:00
Efraim Flashner 1009e6e7ec
gnu: go@1.4: Build with binutils-gold on armhf and aarch64. 
* gnu/packages/golang.scm (go@1.4)[native-inputs]: Add binutils-gold
for armhf-linux and aarch64-linux.
 2019-02-04 08:07:47 +02:00
Efraim Flashner 28317d4990
gnu: Add binutils-gold. 
This commit is thanks to Guix Days.

* gnu/packages/base.scm (binutils-gold): New variable.
 2019-02-04 08:07:39 +02:00
Vagrant Cascadian 4da4e952dd
gnu: u-boot: Update to 2019.01. 
* gnu/packages/bootloaders.scm (u-boot): Update to 2019.01.
(u-boot-tools): Disable CONFIG_SOUND in sandbox configs.
(u-boot-pinebook)[source]: Remove patches.
* gnu/packages/patches/u-boot-pinebook-a64-update-dts.patch,
gnu/packages/patches/u-boot-pinebook-dts.patch,
gnu/packages/patches/u-boot-pinebook-mmc-calibration.patch,
gnu/packages/patches/u-boot-pinebook-r_i2c-controller.patch,
gnu/packages/patches/u-boot-pinebook-syscon-node.patch,
gnu/packages/patches/u-boot-pinebook-video-bridge.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust as necessary.
 2019-02-04 00:21:48 +01:00
Danny Milosavljevic c7797b75cc
gnu: efilinux: Fix indentation of source code. 
Follow-up to 6adfcbeab1.

* gnu/packages/efi.scm (efilinux): Fix indentation of source code.
 2019-02-04 00:16:47 +01:00
Danny Milosavljevic 6adfcbeab1
gnu: fc-host-tools: Update to 9a. 
* gnu/packages/embedded.scm (fc-host-tools)[source]: Update to 9a.
[arguments]<#:phases>[patch-installation-paths]: Modify.
 2019-02-04 00:14:18 +01:00
Danny Milosavljevic bb4a8f4851
gnu: Add efilinux. 
* gnu/packages/efi.scm (efilinux): New variable.
 2019-02-04 00:14:18 +01:00
Danny Milosavljevic 527aab6f18
gnu: Add efitools. 
* gnu/packages/efi.scm (efitools): New variable.
 2019-02-04 00:14:18 +01:00
Danny Milosavljevic 3da49652ad
gnu: Add sbsigntools. 
* gnu/packages/efi.scm (sbsigntools): New variable.
 2019-02-04 00:14:18 +01:00
Danny Milosavljevic f8ff37d6c0
gnu: Add gnu-efi. 
* gnu/packages/efi.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2019-02-04 00:14:16 +01:00
Ludovic Courtès 765a5bf167
self: Ensure the daemon refers to the right 'guix' command. 
Previously it would refer to
/var/guix/profiles/per-user/root/current-guix/bin/guix, which would fail
when that profile does not exist.  This is notably the case when using
'channel-instance->package' as done in commit
7e6d8d366a.

* gnu/packages/package-management.scm (guix-daemon)[arguments]: In
'install phase, honor environment variable 'GUIX'.
* guix/self.scm (whole-package)[wrap]: New procedure.
Use it.
 2019-02-04 00:03:30 +01:00
Ricardo Wurmus 6bb5f88e1d
gnu: Add guile-picture-language. 
* gnu/packages/guile-xyz.scm (guile-picture-language): New variable.
 2019-02-03 01:37:38 +01:00
Nicolas Goaziou 7f055a0a37
Update copyright header. 2019-02-02 22:54:12 +01:00
Nicolas Goaziou d90fd183bd
gnu: giac-xcas: Update to 1.5.0-37. 
* gnu/packages/algebra.scm (giac-xcas): Update to 1.5.0-37.
 2019-02-02 22:52:05 +01:00
Kei Kebreau ba259bad59
gnu: milkytracker: Add LHA decompression support. 
* gnu/packages/music.scm (milkytracker)[inputs]: Add lhasa.
 2019-02-02 09:22:17 -05:00
Nicolas Goaziou 8f4d15f1ff
Update some copyright headers 2019-02-02 13:41:46 +01:00
Nicolas Goaziou 5fc843cc63
gnu: wireshark: Update to 2.6.6. 
* gnu/packages/networking.scm (wireshark): Update to 2.6.6.
 2019-02-02 13:39:58 +01:00
Clément Lassieur b2cb16133f
gnu: Fix syntax error in emacs-xyz.scm. 
* gnu/packages/emacs-xyz.scm (emacs-repo): Add missing parentheses and
license.
 2019-02-02 12:55:13 +01:00
Mathieu Othacehe 7106671088
gnu: Add emacs-google-c-style. 
* gnu/packages/emacs-xyz.scm (emacs-google-c-style): New variable.
 2019-02-02 11:42:11 +01:00
Mathieu Othacehe bdccd7e101
gnu: Add emacs-alect-themes. 
* gnu/packages/emacs-xyz.scm (emacs-alect-themes): New variable.
 2019-02-02 11:42:11 +01:00
Nicolas Goaziou c14b3a8d7b
gnu: silkaj: Update to 0.6.5. 
* gnu/packages/finance.scm (silkaj): Update to 0.6.5.
[inputs]: Add python-click, python-dunitpery.  Remove python-pyaes,
python-scrypt, and python-commandlines.
 2019-02-02 11:38:28 +01:00
Nicolas Goaziou 352033f31b
gnu: python-duniterpy: Update to 0.52.0. 
* gnu/packages/finance.scm (python-duniterpy): Update to 0.52.0.
[propagated-inputs]: Add python-pyaes.
 2019-02-02 11:29:50 +01:00
Clément Lassieur 57b663fa8f
gnu: Add emacs-repo. 
* gnu/packages/emacs-xyz.scm (emacs-repo): New variable.
 2019-02-02 11:14:39 +01:00
Clément Lassieur ba25ba903d
gnu: Add emacs-dtrt-indent. 
* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): New variable.
 2019-02-02 11:14:39 +01:00
Arun Isaac 43af5f9d19
gnu: Add emacs-mkmcc-gnuplot-mode. 
* gnu/packages/emacs-xyz.scm (emacs-mkmcc-gnuplot-mode): New variable.
 2019-02-02 00:31:21 +05:30
Tobias Geerinckx-Rice 389ae5181e
gnu: znc: Update to 1.7.2. 
* gnu/packages/messaging.scm (znc): Update to 1.7.2.
 2019-02-01 17:39:51 +01:00
Leo Famulari 39ea311cbe
gnu: direnv: Update to 2.15.2. 
* gnu/packages/shellutils.scm (direnv): Update to 2.15.2.
[inputs]: Use the default Go compiler. Add go-github-com-burntsushi-toml
and go-github-com-direnv-go-dotenv.
[arguments]: Add a 'setup-go-environment' phase.
 2019-02-01 17:21:13 +01:00
Leo Famulari bc58bb9bdf
gnu: Add go-github-com-direnv-go-dotenv. 
* gnu/packages/golang.scm (go-github-com-direnv-go-dotenv): New variable.
 2019-02-01 17:21:10 +01:00
Pierre Neidhardt c4e4b85397
gnu: emacs-slime: Update to 2.23. 
* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.23.
 2019-02-01 17:13:17 +01:00
Leo Famulari 5d5e45850a
gnu: certbot, python-acme: Update to 0.30.2. 
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.30.2.
 2019-02-01 16:49:44 +01:00
Mark H Weaver 85ca23caba
gnu: linux-libre: Update to 4.20.6. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.6.
(%linux-libre-hash): Update hash.
 2019-01-31 23:59:06 -05:00
Mark H Weaver 65466a2b10
gnu: linux-libre@4.19: Update to 4.19.19. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.19.
(%linux-libre-4.19-hash): Update hash.
 2019-01-31 23:57:57 -05:00
Mark H Weaver 9d5414f1a4
gnu: linux-libre@4.14: Update to 4.14.97. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.97.
(%linux-libre-4.14-hash): Update hash.
 2019-01-31 23:57:06 -05:00
Mark H Weaver 20d32ac279
gnu: linux-libre@4.9: Update to 4.9.154. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.154.
 2019-01-31 23:56:15 -05:00
Eric Bavier 4b444fc5a5
gnu: imb: Update to 2019.1. 
* gnu/packages/benchmark.scm (imb)[source]: Update to 2019.1.  Use
git-download.
[arguments]: Adjust build and install phases for new source organization.  Let
the standard 'install-license-files' phase do its thing.
 2019-01-31 22:12:56 -06:00
Eric Bavier 56d447ba16
gnu: r-rmpi: Setup MPI for tests. 
* gnu/packages/cran.scm (r-rmpi)[arguments]: Add 'mpi-setup phase.
 2019-01-31 22:12:56 -06:00
Eric Bavier eb6785cfe7
gnu: fftw-openmpi: Setup MPI for tests. 
* gnu/packages/algebra.scm (fftw-openmpi)[arguments]: Add 'mpi-setup phase.
 2019-01-31 22:12:56 -06:00
Yoshinori Arai ff75441fcf
gnu: Add xclock. 
* gnu/packages/xorg.scm (xclock): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-01-31 22:34:23 +01:00
Gabriel Hondet 07c82daad4
gnu: Add python-isrcsubmit. 
* gnu/packages/music.scm (python-isrcsubmit): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-01-31 22:01:43 +01:00
Gabriel Hondet 1331a6c07a
gnu: Add python-discid. 
* gnu/packages/music.scm (python-discid): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-01-31 22:01:43 +01:00
Marius Bakke 84243592fe
gnu: lookingglass: Download from git. 
* gnu/packages/virtualization.scm (lookingglass)[source]: Change to GIT-FETCH.
 2019-01-31 20:57:22 +01:00
Marius Bakke cb85742fa8
gnu: hwloc: Update to 2.0.3. 
* gnu/packages/mpi.scm (hwloc-2.0): Update to 2.0.3.
 2019-01-31 20:57:22 +01:00
Marius Bakke 9dd5084589
gnu: hwloc@1: Update to 1.11.12. 
* gnu/packages/mpi.scm (hwloc): Update to 1.11.12.
 2019-01-31 20:57:22 +01:00
Marius Bakke 8f8bc40677
gnu: VTK: Update to 8.2.0. 
* gnu/packages/image-processing.scm (vtk): Update to 8.2.0.
 2019-01-31 20:57:21 +01:00
Marius Bakke f1d4f264a2
gnu: VTK: Use HTTPS URLs. 
* gnu/packages/image-processing.scm (vtk)[source, home-page]: Use HTTPS.
 2019-01-31 20:57:21 +01:00
Marius Bakke 3cf3255796
gnu: whois: Update to 5.4.1. 
* gnu/packages/networking.scm (whois): Update to 5.4.1.
 2019-01-31 20:57:21 +01:00
Marius Bakke 8f22bf9e6d
gnu: json-modern-cxx: Fetch from git. 
* gnu/packages/cpp.scm (json-modern-cxx)[source]: Use GIT-FETCH.
[source](snippet): End on #t.
 2019-01-31 20:57:21 +01:00
Marius Bakke 0a3849f610
gnu: httpd: Update to 2.4.38. 
* gnu/packages/web.scm (httpd): Update to 2.4.38.
 2019-01-31 20:57:21 +01:00
Marius Bakke 71cb7512c4
gnu: libwebp: Update to 1.0.2. 
* gnu/packages/image.scm (libwebp): Update to 1.0.2.
 2019-01-31 20:57:21 +01:00
Marius Bakke 39855bfef1
gnu: p11-kit: Update to 0.23.15. 
* gnu/packages/patches/p11-kit-jks-timestamps.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tls.scm (p11-kit): Update to 0.23.15.
[source](patches): New field.
 2019-01-31 20:57:21 +01:00
Marius Bakke 7c56237b4c
gnu: i3-wm: Update to 4.16.1. 
* gnu/packages/wm.scm (i3-wm): Update to 4.16.1.
 2019-01-31 20:57:21 +01:00
Marius Bakke b8c0b9c1a3
gnu: msmtp: Update to 1.8.2. 
* gnu/packages/mail.scm (msmtp): Update to 1.8.2.
 2019-01-31 20:57:21 +01:00
Efraim Flashner 9117d6df87
gnu: tcc: Fix building on armhf-linux. 
* gnu/packages/c.scm (tcc)[arguments]: Add 'configure-flag to set the
triplet when building for armhf-linux.
 2019-01-31 18:39:19 +02:00
Efraim Flashner 0270b24b65
gnu: tcc: Mark aarch64-linux as supported. 
* gnu/packages/c.scm (tcc)[supported-systems]: Remove aarch64.
 2019-01-31 17:47:44 +02:00
Ricardo Wurmus 740a335558
gnu: Remove xboing. 
* gnu/packages/games.scm (xboing): Remove variable.
 2019-01-31 16:29:53 +01:00
Ricardo Wurmus 395a95bb75
gnu: guile-hall: Wrap with guile-config. 
* gnu/packages/guile-xyz.scm (guile-hall)[arguments]: Extend
"hall-wrap-binaries" phase to include guile-config in the load path.
 2019-01-31 16:26:22 +01:00
Andreas Enge adba64662c
gnu: Add python-cypari2 and python2-cypari2. 
* gnu/packages/sagemath.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.
 2019-01-31 14:58:47 +01:00
Leo Famulari 11d19ca236
gnu: QEMU: Fix CVE-2018-16872 and CVE-2019-6778. 
* gnu/packages/patches/qemu-CVE-2018-16872.patch,
gnu/packages/patches/qemu-CVE-2019-6778.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
 2019-01-31 14:35:48 +01:00
Arun Isaac a382860bd4
gnu: rss-bridge: Update to 2019-01-13. 
* gnu/packages/web.scm (rss-bridge): Update to 2019-01-13.
[source]: Use git-fetch.
[native-inputs]: Remove gzip and tar.
 2019-01-31 16:27:39 +05:30
Rutger Helling e1c3ffcfcd
gnu: scdoc: Update to 1.8.1. 
* gnu/packages/man.scm (scdoc): Update to 1.8.1.
 2019-01-31 10:09:29 +01:00
Nicolas Goaziou 2e484e78cd
gnu: mame: Update to 0.206. 
* gnu/packages/emulators.scm (mame): Update to 0.206.
 2019-01-30 22:59:44 +01:00
Kei Kebreau 0dcea35d9a
gnu: Add lhasa. 
* gnu/packages/compression.scm (lhasa): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-01-30 21:24:01 +01:00
Ricardo Wurmus ba123b6dda
gnu: star: Update to 2.7.0a. 
* gnu/packages/bioinformatics.scm (star): Update to 2.7.0a.
 2019-01-30 15:44:47 +01:00
Mark H Weaver 24886c1389
gnu: icecat: Update to 60.5.0-guix1 [security-fixes]. 
Includes fixes for CVE-2018-18500, CVE-2018-18501, and CVE-2018-18505.

* gnu/packages/gnuzilla.scm (icecat): Update to 60.5.0-guix1.
[version]: Use %icecat-version.
[source]: Inherit from 'icecat-source'.  Remove obsolete patches.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch,
gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch,
gnu/packages/patches/icecat-use-system-media-libs.patch: Adapt to 60.5.0.
 2019-01-29 22:29:42 -05:00
Mark H Weaver 948879eeda
gnu: icecat: Add icecat-source. 
* gnu/packages/gnuzilla.scm (computed-origin-method): New variable.
(%icecat-version, icecat-source): New variables.
* gnu/packages/patches/icecat-makeicecat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-01-29 22:29:40 -05:00
Ludovic Courtès 286bea0dba
gnu: clang-runtime@3.5: Fix compilation on glibc 2.28. 
Reported by zimoun <zimon.toutoune@gmail.com>.

* gnu/packages/llvm.scm (clang-runtime-3.5): Add
"clang-3.5-libsanitizer-ustat-fix.patch".
 2019-01-29 23:46:33 +01:00
Ludovic Courtès b552e307ed
gnu: guile-commonmark: Update to 0.1.2. 
* gnu/packages/guile-xyz.scm (guile-commonmark): Update to 0.1.2.
[source](modules, snippet): Remove.
 2019-01-29 23:46:33 +01:00
Ludovic Courtès db9771a9a9
gnu: guile-git: Update to 0.2.0. 
* gnu/packages/guile.scm (guile-git): Update to 0.2.0.
 2019-01-29 23:46:33 +01:00
Leo Famulari f5eb570c59
gnu: Mutt: Update to 1.11.2. 
* gnu/packages/mail.scm (mutt): Update to 1.11.2.
 2019-01-29 15:52:33 -05:00
Ricardo Wurmus 631337063e
gnu: Add texlive-latex-beamer. 
* gnu/packages/tex.scm (texlive-latex-beamer): New variable.
 2019-01-29 17:18:23 +01:00
Ricardo Wurmus 1d4c2dabef
gnu: texlive-latex-seminar: Copy files to output. 
* gnu/packages/tex.scm (texlive-latex-seminar)[build-system]: Use
trivial-build-system.
[arguments]: Copy files to output.
 2019-01-29 14:07:03 +01:00
Mathieu Lirzin 9e532ae22a
gnu: clojure: Update to 1.10.0. 
* gnu/packages/clojure.scm (clojure): Update to 1.10.0.
[source]: Use 'git-fetch'.
 2019-01-29 10:59:06 +01:00
Rutger Helling b412ddcb1a
gnu: kitty: Update to 0.13.3. 
* gnu/packages/terminals.scm (kitty): Update to 0.13.3.
[inputs]: Replace python2-pygments with python-pygments. Add wayland.
[arguments]: Add 'hard-code-libegl phase.
 2019-01-29 10:10:06 +01:00
Efraim Flashner 23c2598233
gnu: x265: Update to 3.0. 
* gnu/packages/video.scm (x265): Update to 3.0.
[source]: Remove patch.
* gnu/packages/patches/x265-detect512-all-arches.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-01-29 10:07:58 +02:00
Ludovic Courtès db7c901af1
gnu: guix: Update to 4bddd12. 
* gnu/packages/package-management.scm (guix): Update to 4bddd12.
 2019-01-28 23:52:20 +01:00
Ricardo Wurmus 66abc619d5
gnu: Add missing file. 
* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/installer/newt/user.scm.
 2019-01-28 23:28:46 +01:00
Gábor Boskovits 95bc85b7da
gnu: Add openjdk 11. 
* gnu/packages/java.scm (openjdk11): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2019-01-28 23:15:27 +01:00
Meiyo Peng 4bddd12ad5
gnu: fish: Use fish-foreign-env to source /etc/profile. 
* gnu/packages/shells.scm (fish): Use fish-foreign-env to source /etc/profile
  when user logs in.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-28 23:13:41 +01:00
Meiyo Peng 1d962fc0a1
gnu: Add fish-foreign-env. 
* gnu/packages/shells.scm (fish-foreign-env): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-28 23:13:41 +01:00
Meiyo Peng e1dba5bea0
gnu: fish: Update to 3.0.0. 
* gnu/packages/shells.scm (fish): Update to 3.0.0.
  [source]: Remove dead URL.
  [inputs]: Remove bc.  Replace python-wrapper with python.
  [arguments]: Remove configure-flags.  Enable fish to source
  /etc/fish/config.fish.  Enable completions, functions and configurations
  in user's and system's guix profiles.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-28 23:13:41 +01:00
Ludovic Courtès f15800946d
gnu: youtube-dl: Update to 2019.01.27. 
* gnu/packages/video.scm (youtube-dl): Update to 2019.01.27.
 2019-01-28 23:13:40 +01:00
Ricardo Wurmus 5a23696a47
gnu: fastcap: Fix build and use INVOKE. 
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace texlive-tiny
with a texlive-union including texlive-fonts-amsfonts.
[arguments]: Use INVOKE in build phases.
 2019-01-28 20:30:20 +01:00
Ricardo Wurmus ad34338d1e
gnu: scons: Update to 3.0.3. 
Fixes <https://bugs.gnu.org/34236>.

* gnu/packages/python-xyz.scm (scons): Update to 3.0.3.
[arguments]: Add "bootstrap" phase.
 2019-01-28 20:09:51 +01:00
Ricardo Wurmus 1d1e3676ba
gnu: r-genomicfeatures: Update to 1.34.2. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.2.
 2019-01-28 16:27:35 +01:00
Ricardo Wurmus ea0eaf537a
gnu: r-variantannotation: Update to 1.28.10. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.10.
 2019-01-28 16:27:35 +01:00
Ricardo Wurmus df00ca25bc
gnu: r-rmpfr: Update to 0.7-2. 
* gnu/packages/cran.scm (r-rmpfr): Update to 0.7-2.
 2019-01-28 16:27:35 +01:00
Ricardo Wurmus 61cb2e3133
gnu: r-waveslim: Update to 1.7.5.1. 
* gnu/packages/cran.scm (r-waveslim): Update to 1.7.5.1.
 2019-01-28 16:27:35 +01:00
Ricardo Wurmus 0207ad9ee8
gnu: r-activity: Update to 1.2. 
* gnu/packages/cran.scm (r-activity): Update to 1.2.
[propagated-inputs]: Remove r-overlap.
 2019-01-28 16:27:35 +01:00
Ricardo Wurmus 211628044e
gnu: r-emmeans: Update to 1.3.2. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.2.
 2019-01-28 16:27:35 +01:00